TCONS_00051025 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051025
Unique NameTCONS_00051025
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1470

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051025 ID=TCONS_00051025|Name=TCONS_00051025|organism=Clytia hemisphaerica|type=transcript|length=1470bp
GTATGactgGCTCAAGGCCGCTCAAGGTCATTTGATCATCTtgtatttga
aaaatgtgaacTTGATACAAAAACGGGAGAATACAATGATGGCCTGCTAT
TAAGTTGTAAAATGTAAACAGAGTATCGAATACTTTCACTAAGGATGGCA
GATAATACAGAACTGAGAATTTTGACGTTAATCTTCTTCCCGACAGTCGT
GCTGTGTGGACaatgtTTTATTCCAGACTTCAAATCTGAAGGCGATATTA
ATTTGATGCAAGCTCTTGAACCATGCTGTTTTGGTAGTTCGAAATGCAAC
ACAAGCGAgaatcaatttcattttggaaaGAACTTACGTTTATCGGAAAT
CAAACCGGACGTCATGCTTTCCTGCGTCACACCCGGTGTTTTCCATTGCA
CGCGATGTCCTGGTGGTCTGTTCTTCTCAGAGAAGTGCAATGCTTGTATG
GAGTATTTGAAAGatgAGCAGAATATATGTCCAGATGTCAAACCACCCGC
AACACCCACTGATACGCCCGACCCTAGCTttGACAAGGATTTCTGCAAGC
AACCTCCATTGAATGGACAACACATGGGCAACAAAGCGGACCCGAAGAAC
AGACACTATTACTACGCATGCGTCAATAGATACACATACCACATGCCATG
TCCAAAAGGGTTGACATACAATGAACATGTAGATGCCTGTAGACGATAAG
CTATCTCCATGGAAATGGGGCTTCAACGtttaatttatattttaatCGAC
GGGAAAATTTGAACTGGTACATAACAGATTGCATTCCCAATTACTGTTAT
AAATGAGCTTTttcagaaataatttgaatatggggACGTGGAGGatgtaa
catttttttggaaatttacccccggacagaaggtctaaccccccggacaa
gcatcaatTGACCCCTTAGACATTCAAAAATTACCGTCTAGCAGAGGAAA
ATTACCAGAGCAAGTTTagcccccggacaaggcaaattttgtagatattt
CACTCCCGGACACTCTATCCTCCACCtccccatgtacgaacattttctta
aaaagagcTCAATACCAACTTTCACAAAATCCAACACTCTTTTactttga
ttattttctaattttcgcTTTGCTTTGCTTTTCTCGGTTCTTCATATGAT
GTTCACTGGTGTGTCTGTGTGCCAGAAgcgaaataaaaaattgaactttt
gaattaaaatttggTCTATGTATGCAATATGTTTACATGTGATTAGTACG
ATATTTGATAGTTATTCTTATTTGAAGGTAACGAAACTTTTAgttctttt
ttaagtttttaaactTGTAATGACGcatttattttgtaattttttatacg
gaaaaatgaaagttaaaaaTGATATTCAAAAGACAATTCCTTGTTTGCTT
ACAGTACACCAGGCAGGATCTTGAGTCgaaacaatacaccttttcgaccg
tagtcgcgggGTCaagcgcg
Run BLAST on NCBI

protein sequence of TCONS_00051025-protein

>TCONS_00051025-protein ID=TCONS_00051025-protein|Name=TCONS_00051025-protein|organism=Clytia hemisphaerica|type=polypeptide|length=184bp
MADNTELRILTLIFFPTVVLCGQCFIPDFKSEGDINLMQALEPCCFGSSK
CNTSENQFHFGKNLRLSEIKPDVMLSCVTPGVFHCTRCPGGLFFSEKCNA
CMEYLKDEQNICPDVKPPATPTDTPDPSFDKDFCKQPPLNGQHMGNKADP
KNRHYYYACVNRYTYHMPCPKGLTYNEHVDACRR
Run BLAST on NCBI

transcript from alignment at scaffold_192:75231..86463-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051025 ID=TCONS_00051025|Name=TCONS_00051025|organism=Clytia hemisphaerica|type=transcript|length=11233bp|location=Sequence derived from alignment at scaffold_192:75231..86463- (Clytia hemisphaerica)
GTATGACTGGTACACGTTTTTTTATAAGAACAAACTAATTAAGAACATAA
GGCTTCGATGGCCAAAAATGTTAAGAACCATTTAAGAACATTCTAAGGCT
TTGGGGATTCCAAAACACCCGATTACTTAGGAAAACAGACAAGATAGCCA
CAAAATGGTGAAAATAATAACATGTTAAGAACATTTTTAGGCTTAAATCT
CAAAAAGTTAAGAACATCCGAAAGTTTCAAAAAAAAATTTTGATGTTCTT
ATAAGAAAAACACGTGTAGTTTTTAAAGGACTTTTTCCGTTCCTTATTTT
TATTGTATTTTAGCCTACGATCAGAAGCAGATGTATGTACGCCTTTTTTG
CTTCAGTCACTTTTTATTATATTTTTTTTTTTTCTACCTCTACAGGCTCA
AGGCCGCTCAAGGTCATTTGATCATCTTGTATTTGAAAAATGTGAACTTG
ATACAAAAACGGGAGAATACAATGATGGCCTGCTATTAAGTTGTAGTAAG
TACCCTCGTTAATTACCCTTCCTTGTAATTATCTTACATTTCCGCTCGTT
GACTGAGTATTATAAAAGTGTACATTGACAGAAACATTCTTTCATCATTT
CTGATATTGAAACATTGTTTGTTTGCATGAGGATGTTATATAAGATGAAA
TTTAGTTTTATTGATTGGAAATTTCTCCGTTATGTTTTAGGTTTTGGTTT
TGACATTTCTATCGTACGGTCGATTCTAATTATTGTAGTTTTTTTTTTGT
CCTGGTTTCAAGGTTTCAATGGCGAAACTCCACTTTAAAAGCTGTTTTCT
ACGTTGAGTAGTTTTTCATGATGTGTGTAGTTTAAGGTTTTTTTAAAATG
TTGTTTCACCGTACTGACGACTAACTATCCAAAAGTCCGCTCAACAACTC
AATCACTTCTAAGCATTGATTGGTTCATTTGGTTCGATTACATCAAGTAG
TAAGTTTGCGACCGCAGTTGAGGGCGACCCGAACGCTCCCTTTTTCTAGC
TGTCTACCCGAAGGTAGGGGAGGGCGCCACTCATTTCCCTGGATTTCTCC
ACTTACCCTTGATCCGTCTCTTTAGTTGCTAAGCATCAAGCAGAGAGGCG
TCAAGTACTACTTTGAGGACCTTTGGTATGACCCGGCTGGGGATCGAACC
TACAACCTTGCGCACCGTAGCTGAATGCTCTACCTTCATGCTACGGTCGC
TAAAATTATTACATCGTAATTTTGACATTTTTTAAACCAGTCGGACTTAT
CAGGATTGTCGAGCGGACTTATCAGGATTGTATTAGCCGTAAGTACAAGG
TATTGTTCAAGATATTCTTTAGAACCTTGTATTGTTTAAGTTGTGCCAAA
TTACTGCGTTCTGATCTCGTTTTTAACACTTTTGGTTTGCAGTAAAACGA
AAATTGAGTTGATTCAAACCATTCGATTAGTAGTACGAATCGAGGTATTT
GTTAGGAAATGACAGGGTAATAAAAATTTGTGCTCGCTTAATAACGTGAG
AAATTTTTAGCTAAGTTGATCGAGTTGACTACCAAAGCTACTAAGCTCAA
TGTTGAAACATTTTTCAAAAAGAACGACTAATTCAAAAAAGAAATTAAAA
ACTTTTGAATGAATCGTTTTTAGCAGAGGCGTTGTAATGCACATTCTGAG
CGGAAATAAGAGTGGTGGACGCTATGGCAACGGACTTTATTCTCTTTTTA
CGCCCCCTTGAAAAGAGTGGTTACTCTAGAAACGAACATCCTAAATTGAA
TGGAGCATTATAGAAGGCTGATTTGTAAAGAATTTCATCAACAATATCAA
TAGACTAGTAAACTAGTCGGTTATTACTTATAACCTTATAATAAAACTGT
CAATCAAATAATGTAAACACTAATTAAATATTCAGCGCACGTGAGAGAAA
AGGAAAATTCAGAAAAGACACTCAAACTCACTCCTTAGATTCTTTTTATT
TGGAGCTTAAATTTTTTGTATATGGGTCTGTTTTCAACGACTAGTTTACT
AGTCTACAATATCAATAAATATTAAGCATATGACGTAAATTATCTAGGGG
TACTTGGTTATTGAGGTGGTGCATGTATCTGAGCCAAAATTCGAAAATTG
ATCAAAAGGGAGAAAAGAAAATTGATCCAAACATTGATCCAAATCTTTCG
GAAATTGTGACCCTTGAACCTTTTTAGAGGACGAACTTTCGATTTTCTTG
ATTTTTCGCTTTAGAAAGAGAACTAGTTTATGTAACTCTCAAAGATTGAA
TACACAATTAATACAAGAGTGCTGGATTTTTTTTGGTTAAAAGTCTTTAA
TTGTGTTATCTATCATTTAAATAGTTTTTCTTGTTTAGAAATGTAAACAG
AGTATCGAATACTTTCACTAAGGATGGCAGATAATACAGAACTGAGAATT
TTGACGTTAATCTTCTTCCCGACAGTCGTGCTGTGTGGACGTAAGTGTGT
CATAGATTTATAAAGCCCGAAGTGCTAGATGTCGTGCTTTAAAAAAATAT
TGCTGCTATTGTTTTCGAAAATCTGTGAAGCTTCTGATTGGTCAAGCGCT
GAAATTCTATTGTAATGTCACGTGACTTAGGTAAGATTTCCTACCTAACC
TCGGCACACTTTTCAGCAAAAGTCCAGTACGCCTAAAAAAGCGTTTACAA
TACATAATTTTTAACAAATTCCAATTTTCAGTTGTTTAGCATTCTAGCTC
ATTTTGTGAAAAATTAACTTTGACCAACCCGCTTTTATTTTACGAGATAG
TGAATAAAAATTGGCTAATTTGAGAGCCCTTGAGCCTTAGCATATTTAGC
AACCTGGTAAAAAATGTTTGTTTCTTCCACCAGACCGCTAGACTGTACGC
ATCCCCTCTTATCCGATATGTTTTGATATAGGGGCTATGTATCGTGTTAA
ATCCCCCCGTCCGAGAGTTACCAACGTCTTTGTGATTTTGAGTTTTAGGA
GCTTGATTAGTAAGTTTTATGTAATAGAGCTTTAAATTTCATTAAACTAT
AATTAAAAATTTGAATGGCTAGAGGTTAAAAAATATTTGGATTTCTGAAG
CTTTTTAAGAAAATTGAAACAGGTTACCCTAAAATTGGGGTAACTCTCGG
ACGGGAATTTTATACACGATGCGCATCCCCTATATCAAAATCAATTCTGG
GGATGCGCGCAGCTTACCAGGCCATTTCCCTCGGAACAGAAGAAAAATTA
GTTATACCCAAAAGATGATGTCTCCAAAAAAGCGTCGCTACCATGGTATA
TACACTTTTAGAAATTATAAATTATCTGAAATTTTAGAAAGGAAGATCAT
ACGGTTATTCATATACGGTATTCCCCGTTGAAACAAAAGTTTTTATTTTT
CCATCCCATGGATATTTCTCTTTTTTCTTTTTCAGAATGTTTTATTCCAG
ACTTCAAATCTGAAGGCGATATTAATTTGATGCAAGCTCTTGAACCATGC
TGTAAGTGATTCACAGACCTCTATAGATATACTTCCTATATATGGTTGAC
GCCCTCTTCGATTTTCAAGGGGAATTGGATTTTCATTGAATAAGGGAGCA
TATCGAAGGGTAGAGCATCTTTTTGAGAGTTTCTTGTTGACGGTTGATCT
CAATATAATCGAATTATGGAGCATATCGGAAGAACATCGAATTAGAGAGC
CTCAACTGTATATAAAAACTTTATTGTCCGAGGATGAGCAGAAGTCTATA
CTATAGAGTAAACTACCTCGAATCCTGTTGTTATTCGCTTAAAGGGACAT
TAAAGTAGTAAAATGTAAACATTGCGCGAACCACGTGTCATTAAAGAGAA
CAATTAAAATCACGTGTCAAAAACAAACTTGTAAAACAATTGAACAATCA
AAATTGGCCATATTTGGTTTGATTTTTTATTTTGACATGTGACATTTGTT
TTGATTTTGTATCCTCTGCATACAGTTTGTTTACAAATTTCGCAAGTACT
GTTATGTCCCTTTAAGCCACATTTCTGATCAATTGTTCTTATGGTCTCTT
TTGCTAATTCGACCTCGAACGGGATATTTAAAGAATTTTCAAAGCATATC
CAATTCAGGGTTCGAGAAAGGAAAGAAATTCGTATAAGCATTGTATTGAA
TTTCAGGTAAATAATCTAATTTCACAATAAAAAAGAAACTCAAATACTCT
GAATAATGAGCTTTTCCAGAAAATGTCCGTTCATGGGGGTGGAGGATATA
GTGTCCGGGGGGGGGTAGTGAAAAATCTACCAAATTGTCTTGTCCGGGGG
GTAAATTTGCTCTGTTTGAGGCTAATTTTGAATATCCAGTGGGTCAACTG
ATGCTTGTCCGGGGGTTATACCTGCTGTCTGGGGGGGTCAAAAGTCACAA
TGTTCGGGGGTAAATTTCCAAGAAATATTATATCCTTATATCCTCCACTC
CCCCCTCCCCTATATTCAATTTTTTTCTGGAAAAGCCCATTGAGATAATG
ATATGTACTTTGCTTTTAATTATTTATCAATTATTTCATCCTCATGAAAT
CAAAGCAACAAATATATTTATTTTCCAACCCAACCAGGTTTTGGTAGTTC
GAAATGCAACACAAGCGAGAATCAATTTCATTTTGGAAAGAACTTACGTT
TATCGGAAATCAAACCGGACGTCATGCTTTCCTGCGTCACACCCGGTGTT
TTCCATTGCACGCGATGTCCTGGTGGTCTGTTCTTCTCAGAGAAGTGCAA
TGCTTGTATGGAGTATTTGAAAGGTGAGAAATCTGAACACCTAGCAGCTA
TTGACTAGAAAAAGCACCAGTTAACCTAGAAACAGTTTACTTACAGAATT
TGGACCTATTTTTTGAAGGGACTCCATATGTGCTTGCTTGAAAATTTCGA
AAATTGATTAAAAAATTGTCAGTATACTACAAGAAGCATGGGGTTATGTA
TTCAACAGTCGAAAACTTATTGACAGCTTTCAAATGGCCCACACCTCAGT
ATGAGTTTGTGCTCAGTAATAAACTAATAGATCCTCGGCCGGGTCCTACC
AAAGATTTCTTACTTAGTACAAAATTGTTGGTACTTGATGTATCTCAGCT
TGATGCTCAACAATTAAGAGAAGGATCAAGGGTATGTGGAGCAATCTAGG
GAGAAAGGGTGGCGTTCTCCCCTTTTTTCGGGTAGATAGCATCTCAAGAG
GATCGCCTCCGACTACGCTCGCATATTAACTTACTTAAAGACTTATTGAT
AATAAGCGCAAGAGGTTAATCCTACTCAAATTATCTTTCTTTTTTATTTA
GATGAGCAGAATATATGTCCAGATGTCAAACCACCCGCAACACCCACTGA
TACGCCCGACCCTAGCTGTAAGTAAATTCTCTTCATTATTCCATCTTGTA
GTCCTCTTACGCCTATAAGCATACGCGAATTAAGAAGAAATTCAAGAATT
GTGAGATTCCTTGATAGAGCCACTCTTATTGGATATGTTATGTGTTCAAA
GTTCATGTCATGTCATGTAATAGAAGCTATAGATATTATATATTATTTAA
CAAATAAGTGAAACATAAAAAGCTATGCGATGTGTAACCAAATGAAAATA
ATTTTCTTTTAACGATATTTCGACCTCTTACGTGTCTTCTTCAAGTATTT
CTAGCTCATGTCGTGATCGGACATACATTTTATTATTTTACAAAGATATC
CTAAATGTGCTTAAAAAAAAGAAATCATTAAATACTCAAATAAAGCAAAT
TATTTTATTCGATATCAAATTTGATTGTTATGGTGTCCCCCTCAATACTC
TTTGGTAAATCATCATTGTCGAAGAATATAAGATCACCAGCTCCACCGGT
TTCTTTTCTTTCATCTGTGGGCCGTGTGTAAAGTTTTATAATTCTCTCGT
CATTTTTCATTGTCAATGTTTTCATTTCTTGACCGTTTATAATCAGTTTA
AAAGTGAATCTTTTAAAAGGCATTGGCCATTCCAATACCTTATCAAAAGG
TCCTTGAACAAGATTAAAACATACTGACAAATAATTGATGTCCATGATGA
ATCCGTTCAGGGATATTTTTATTCTACCTCTGTAACCGTTGAAACAGAAG
AAACGTGGTGCCCACCAACCCTTACGGCTCCCTTTCCTCCCTTTCTCTAC
TTGCTCTATTCGAAGCTTTTGGGAATAATTATCAATTTTCCAAGTAAAAG
GACACGAATTCTCAGAAATTATACCCTTTTTAATCATGTTCATTTCAACA
TTGTGTTTCGTTAAAGCAAGTTCAAGCTTCTTTTCTTTCTCGATATTTTC
AATCTTCAACTTTTCTAAAACAGTCTCAGTTTTTCTCAATCGTTCACCCA
ATATAATCAACTGCTTATCTTTCTCTACCAATTTCTCTTGGAATTCTTTT
TTTCACTTGGCTTATTTCCAACCTCATTTCAAATTTCATTTGCAAGATGA
AATGTGCGTTTGTCGACCTCGTCATGTGATCTTTTAACATTGAATTCGTG
CCCTGAAAAAATAGTTTTAACTTCTGAAGAAAATGATGTGATGGGTGGTA
TGGGTATTTAAGGTTCAAAATTTCGTTTTAAATTCTGCACAATTTACCGG
TAACACCGACAGCAAACATTGCTAAAATGGGCTTTTCCAGAAATAGTCCG
TGCCCCCCCCCCATGTTGAGGATATCGGATATCCAGGTGGTTAACGATTT
TTGTTCAAAAGTGGATATCCAGGGGGTTAAATATCTACAAGGGAGCGGAT
ATCCAGGGGGTAAAGTGTCTTTTCAAGTAAAAAATACGATATCCAGGCTA
AGCATCTTTATAAGAGAGGATATCCAGGGAGTTGAGCATATATTTAAGAA
TGGATATCCGGGAGGTCTTTACTAATAAAGTAGGATATCCAGGGGGTTCG
ATACTTCGAAAAATCAATATCCTCAACAGTGGGGGTAAATTCTTTTTCTG
GAAACGCCCAATTCCTATTTTTTTACCACATGGCACTGCGACGAAAATAC
CGTTGTTTTTCCCTCAAATAGTTCAAACCTCCCACTTGGAGGGTCTTTAT
AGATATTATGAAACATTGCTTACTTTGAATTGACATCCGATCACGTGATG
TTGGCAAAACAATTCTATTGGACAATCTTTCTCCAAATGATCTGTCAACT
GAAATGAAAGATTTTTCGATAAGCTTAAATTTTATTACAAATTTTTGATG
AGGACTGAATTCGATCGACGTGGACTTGTTATATAGGGTTGTCAACTTTT
TTCGCACACCCGGTACGAAACGAAGATACTGACTGACATAGTAGAGAAAT
TACATACTTAACTAGCAGCTTTCTTAGAATTTAGACGCATGGAACATTTG
TACTAGTAATAACATGGTTTAGAAGGTGATTTGGGATTAATAACCCCGAG
GTTCATTGAAAACATTTCAAAATAGCCTGAACGTAGCGAGGGCTATTTTG
AAATGTTTTCAATGAAACGAGGGGTTATTAATCCAAAATCACCTTCTAAA
CCATGTTATTCCGCGTTAATTATATGGTCAAAAAAAGAATTGAAGAACAA
TCAATTGTTTTTTTTGGGAGTTTTTTTCGAAACTTATAAAAACATTCGAA
ACTATAAAAAACATTTGATTGACACTCTTATCTAGATTTGCTTAAAAATT
TTGTGCGATATTTTGTTAACCAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTACGG
ATTTATCGCCCCGCTCATCCCTTACAAATCTAAGCTAAATGTAATCAACC
ATATAATTATGTTCGAGATTATCTCTTTAGAATAACTTACATGTGCACGT
ATGAAAGACTTTCCACAATTTTGTTCGCATGGTATGATTTGATACAAACA
CTTATTGAGGTGACTCTATAATTTACAGAAGAGAACATGAATAAAAAGCC
TAATAAAATGTTTCCCTTTTAAGTGTACTCCGTACCTTAATCTCTACCAC
CCTGGGTTAACATCGGCCTTCTATTATAATCCAATGAATTCCAAATATTT
CTGTAGATATCGGGTTTGATTACTGACAACTTCCAGTTTTTCACTTAAAA
CGAAAATCTGTCTGGAGGCTGAAAAATCTGGACGAGGACGGTTCATTTAA
AATGGAATGTGTAGAAAAAGCAAAGAAAAAAGAAAACAATTTCATCTTAT
GGTAAAATTTAGAGGTTAGACAATAAGGCTCCTTTAGAATGGTGGAATCT
TACCTCAAAATGTCTTAGTTCCATTTTCAAAGTGCATTGTGATCGATTAC
GACACCAAACAAAAAGATCCAAGATTTCTCTCTCTTTTCCTCGGTCTCTG
AATACCTAACATTTCATAAATAAGTTTCACCGTTAAAATAGTTTTCCAAT
GCCCATTAATAACCTCCTAAACGCTTTGTTAATTACCTTGTTATTTTGAA
TCATTAAAAGTCTTAAATATATACCTTAATTTGTTGTCGATCGAGGGGGC
AATCACCAGGACTGAAATTAAAAAGGAATAGCTACTTAAATACTCTCCCT
GTAATAGTTTCTTCTCCATCCATTCCGCCCCCTCCCTCACTGGCTACATT
ATTTCATTACATTCACTCTTTCCCGGGGGGGGGGGGACTTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCGGGCTCTT
TCCCTTTGAGTTTAAAGCCTGAAGTGCTCAAATTAACGCATGCGTTCTGG
ATTTGAAATCAGTGGCTTCGGTTGCCACCAAAGGGATTTTCCTTTAGCCT
CTTTTAGGTCTTAAAGGGCTCTGACCATAGTGAATTTTACATAATTGTCG
TGTTTAAAATGTGTTTTCTGACTGATGTAACCAACAAAACTATGGCATGT
TATACATTTTCTGTTTGACAAACTATTCCTGAATCTCAAAATTCAAAAAT
TGCATTGAAAAATTTGATGAAGAAGAAAAGGCTTTAAAATTGGTTGGTAC
TGACTTTTGTTGGTGATGTTTTTCGATGCACTTTTGACAAAAACGGTGAC
CACAGTCATCTGCTTGAACAGGTGCTCTGAGGATGAGATGGCAAATGGTA
CACGTCAAATCTTCTTCTTTCACGTGCTTCTCCACAAATTCAACATCAAA
AGCGACGTCTTTTGGATCGTTGCTGCAGCCATCCCGGTTTCTTTGTCAAA
CCATTTCAGCAGCTACCATACTTACCTATAACAATCCAAAATCTCCCTCA
AAATTCAAACGCTTTTTCTGGGCACTGATTGGTTAGGTCAATTACGTCAT
AATTTTCAACCAGTCAGATCGATTTGATTGTTAAGGGAAGTTTTAGATTA
TCATGGGTAAGTAGGGTACTTGTCAGAAATCCCTATTTGTTCTCCTTACA
ACTTGCTAACGGCCGTTGTATTGATAATAAGTCATTTCCAGTTTCCACGA
TGCTTTTGCTACTACAGACAACAACAACTGTGAAATTCGTCTCACTTCTC
CTGTAAAATATGCGTTGCGATAGAACTTGCAGAGTCGCGTTATACCTAGT
AAAGTTTGTTTACCGTCATTAGAATCAAATTACTTTTAAATACAAGACTA
TCACTTTCTTTGGTTGTATGTACAGTTTTTTTTTAATTCCGAATATAGCT
CACTGGATATTGAATATTACTGACGAATATGCAATCTCTAATTTATAAGG
ATCACGCTCGTCCAATAGGACTGGGAATGACAACAAAGTTGCGTGATTGT
GTTAAAAAATAAGGCGCCGTATCAGGAAAATTTCGTTTTAGGCTTTCCGG
CGCACAACAAGATTCTCGTTGTAGAATTTTCCACGAGAGGACTATTTTCC
TCAGATGATCAATTTTCAAGCGCCTTCAGAGTTTGCCGTGCTCGTCATCA
GTTTAGAGAAGAGTATATGAAATATATTTTCATTTTTGACATAATAGGGG
TTTAATAGGGGTTTAATACTAGGACAATTGTACAATAGCCCCCCCCCCCA
GGAAATATCCCCCGGCCAATTGTGTAAACATAATCTACTTTTTTTAATTT
TACAGTTGACAAGGATTTNGGTTTACCGTGCTCGTCATCAGTTTAGAGAA
GAGTATCTGAAATATCTTGATAATACAATAGCCCCCAGGAAATATTCCCC
GGCCAATTGTGTAAACATAATCAACTTTTTTTTATTTTACAGTTGACAAG
GATTTCTGCAAGCAACCTCCATTGAATGGACAACACATGGGCAACAAAGC
GGACCCGAAGAACAGACACTATTACTACGCATGCGTCAATAGATACACAT
ACCACATGCCATGTCCAAAAGGGTTGACATACAATGAACATGTAGATGCC
TGTAGACGATAAGCTATCTCCATGGAAATGGGGCTTCAACGTTTAATTTA
TATTTTAATCGACGGGAAAATTTGAACTGGTACATAACAGATTGCATTCC
CAATTACTGTTATAAATGAGCTTTTTCAGAAATAATTTGAATATGGGGAC
GTGGAGGATGTAACATTTTTTTGGAAATTTACCCCCGGACAGAAGGTCTA
ACCCCCCGGACAAGCATCAATTGACCCCTTAGACATTCAAAAATTACCGT
CTAGCAGAGGAAAATTACCAGAGCAAGTTTAGCCCCCGGACAAGGCAAAT
TTTGTAGATATTTCACTCCCGGACACTCTATCCTCCACCTCCCCATGTAC
GAACATTTTCTTAAAAAGAGCTCAATACCAACTTTCACAAAATCCAACAC
TCTTTTACTTTGATTATTTTCTAATTTTCGCTTTGCTTTGCTTTTCTCGG
TTCTTCATATGATGTTCACTGGTGTGTCTGTGTGCCAGAAGCGAAATAAA
AAATTGAACTTTTGAATTAAAATTTGGTCTATGTATGCAATATGTTTACA
TGTGATTAGTACGATATTTGATAGTTATTCTTATTTGAAGGTAACGAAAC
TTTTAGTTCTTTTTTAAGTTTTTAAACTTGTAATGACGCATTTATTTTGT
AATTTTTTATACGGAAAAATGAAAGTTAAAAATGATATTCAAAAGACAAT
TCCTTGTTTGCTTACAGTACACCAGGCAGGATCTTGAGTCGAAACAATAC
ACCTTTTCGACCGTAGTCGCGGGGTCAAGCGCG

Coding sequence (CDS) from alignment at scaffold_192:75231..86463-

>TCONS_00051025 ID=TCONS_00051025|Name=TCONS_00051025|organism=Clytia hemisphaerica|type=CDS|length=2775bp|location=Sequence derived from alignment at scaffold_192:75231..86463- (Clytia hemisphaerica)
TTGACAAGGATTTCTGCAAGCAACCTCCATTGAATGGACAACACATGGGC
AACAAAGCGGACCCGAAGAACAGACACTATTACTACGCATGCGTCAATAG
ATACACATACCACATGCCATGTCCAAAAGGGTTGACATACAATGAACATG
TAGATGCCTGTAGACGATAAATGAGCAGAATATATGTCCAGATGTCAAAC
CACCCGCAACACCCACTGATACGCCCGACCCTAGCTGTTTTGGTAGTTCG
AAATGCAACACAAGCGAGAATCAATTTCATTTTGGAAAGAACTTACGTTT
ATCGGAAATCAAACCGGACGTCATGCTTTCCTGCGTCACACCCGGTGTTT
TCCATTGCACGCGATGTCCTGGTGGTCTGTTCTTCTCAGAGAAGTGCAAT
GCTTGTATGGAGTATTTGAAAGAATGTTTTATTCCAGACTTCAAATCTGA
AGGCGATATTAATTTGATGCAAGCTCTTGAACCATGCTATGGCAGATAAT
ACAGAACTGAGAATTTTGACGTTAATCTTCTTCCCGACAGTCGTGCTGTG
TGGACTTGACAAGGATTTCTGCAAGCAACCTCCATTGAATGGACAACACA
TGGGCAACAAAGCGGACCCGAAGAACAGACACTATTACTACGCATGCGTC
AATAGATACACATACCACATGCCATGTCCAAAAGGGTTGACATACAATGA
ACATGTAGATGCCTGTAGACGATAAATGAGCAGAATATATGTCCAGATGT
CAAACCACCCGCAACACCCACTGATACGCCCGACCCTAGCTGTTTTGGTA
GTTCGAAATGCAACACAAGCGAGAATCAATTTCATTTTGGAAAGAACTTA
CGTTTATCGGAAATCAAACCGGACGTCATGCTTTCCTGCGTCACACCCGG
TGTTTTCCATTGCACGCGATGTCCTGGTGGTCTGTTCTTCTCAGAGAAGT
GCAATGCTTGTATGGAGTATTTGAAAGAATGTTTTATTCCAGACTTCAAA
TCTGAAGGCGATATTAATTTGATGCAAGCTCTTGAACCATGCTATGGCAG
ATAATACAGAACTGAGAATTTTGACGTTAATCTTCTTCCCGACAGTCGTG
CTGTGTGGACTTGACAAGGATTTCTGCAAGCAACCTCCATTGAATGGACA
ACACATGGGCAACAAAGCGGACCCGAAGAACAGACACTATTACTACGCAT
GCGTCAATAGATACACATACCACATGCCATGTCCAAAAGGGTTGACATAC
AATGAACATGTAGATGCCTGTAGACGATAAATGAGCAGAATATATGTCCA
GATGTCAAACCACCCGCAACACCCACTGATACGCCCGACCCTAGCTGTTT
TGGTAGTTCGAAATGCAACACAAGCGAGAATCAATTTCATTTTGGAAAGA
ACTTACGTTTATCGGAAATCAAACCGGACGTCATGCTTTCCTGCGTCACA
CCCGGTGTTTTCCATTGCACGCGATGTCCTGGTGGTCTGTTCTTCTCAGA
GAAGTGCAATGCTTGTATGGAGTATTTGAAAGAATGTTTTATTCCAGACT
TCAAATCTGAAGGCGATATTAATTTGATGCAAGCTCTTGAACCATGCTAT
GGCAGATAATACAGAACTGAGAATTTTGACGTTAATCTTCTTCCCGACAG
TCGTGCTGTGTGGACTTGACAAGGATTTCTGCAAGCAACCTCCATTGAAT
GGACAACACATGGGCAACAAAGCGGACCCGAAGAACAGACACTATTACTA
CGCATGCGTCAATAGATACACATACCACATGCCATGTCCAAAAGGGTTGA
CATACAATGAACATGTAGATGCCTGTAGACGATAAATGAGCAGAATATAT
GTCCAGATGTCAAACCACCCGCAACACCCACTGATACGCCCGACCCTAGC
TGTTTTGGTAGTTCGAAATGCAACACAAGCGAGAATCAATTTCATTTTGG
AAAGAACTTACGTTTATCGGAAATCAAACCGGACGTCATGCTTTCCTGCG
TCACACCCGGTGTTTTCCATTGCACGCGATGTCCTGGTGGTCTGTTCTTC
TCAGAGAAGTGCAATGCTTGTATGGAGTATTTGAAAGAATGTTTTATTCC
AGACTTCAAATCTGAAGGCGATATTAATTTGATGCAAGCTCTTGAACCAT
GCTATGGCAGATAATACAGAACTGAGAATTTTGACGTTAATCTTCTTCCC
GACAGTCGTGCTGTGTGGACTTGACAAGGATTTCTGCAAGCAACCTCCAT
TGAATGGACAACACATGGGCAACAAAGCGGACCCGAAGAACAGACACTAT
TACTACGCATGCGTCAATAGATACACATACCACATGCCATGTCCAAAAGG
GTTGACATACAATGAACATGTAGATGCCTGTAGACGATAAATGAGCAGAA
TATATGTCCAGATGTCAAACCACCCGCAACACCCACTGATACGCCCGACC
CTAGCTGTTTTGGTAGTTCGAAATGCAACACAAGCGAGAATCAATTTCAT
TTTGGAAAGAACTTACGTTTATCGGAAATCAAACCGGACGTCATGCTTTC
CTGCGTCACACCCGGTGTTTTCCATTGCACGCGATGTCCTGGTGGTCTGT
TCTTCTCAGAGAAGTGCAATGCTTGTATGGAGTATTTGAAAGAATGTTTT
ATTCCAGACTTCAAATCTGAAGGCGATATTAATTTGATGCAAGCTCTTGA
ACCATGCTATGGCAGATAATACAGAACTGAGAATTTTGACGTTAATCTTC
TTCCCGACAGTCGTGCTGTGTGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032341XLOC_032341Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051025-exon-scaffold_192-1575043694:86455..86463TCONS_00051025-exon-scaffold_192-1575043694:86455..86463Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1575043694:85969..86068TCONS_00051025-exon-scaffold_192-1575043694:85969..86068Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1575043694:84024..84125TCONS_00051025-exon-scaffold_192-1575043694:84024..84125Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1575043694:83013..83078TCONS_00051025-exon-scaffold_192-1575043694:83013..83078Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1575043694:81741..81926TCONS_00051025-exon-scaffold_192-1575043694:81741..81926Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1575043694:81147..81212TCONS_00051025-exon-scaffold_192-1575043694:81147..81212Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1575043694:75231..76171TCONS_00051025-exon-scaffold_192-1575043694:75231..76171Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1510915933:86455..86463TCONS_00051025-exon-scaffold_192-1510915933:86455..86463Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1510915933:85969..86068TCONS_00051025-exon-scaffold_192-1510915933:85969..86068Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1510915933:84024..84125TCONS_00051025-exon-scaffold_192-1510915933:84024..84125Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1510915933:83013..83078TCONS_00051025-exon-scaffold_192-1510915933:83013..83078Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1510915933:81741..81926TCONS_00051025-exon-scaffold_192-1510915933:81741..81926Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1510915933:81147..81212TCONS_00051025-exon-scaffold_192-1510915933:81147..81212Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1510915933:75231..76171TCONS_00051025-exon-scaffold_192-1510915933:75231..76171Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1491911889:86455..86463TCONS_00051025-exon-scaffold_192-1491911889:86455..86463Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1491911889:85969..86068TCONS_00051025-exon-scaffold_192-1491911889:85969..86068Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1491911889:84024..84125TCONS_00051025-exon-scaffold_192-1491911889:84024..84125Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1491911889:83013..83078TCONS_00051025-exon-scaffold_192-1491911889:83013..83078Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1491911889:81741..81926TCONS_00051025-exon-scaffold_192-1491911889:81741..81926Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1491911889:81147..81212TCONS_00051025-exon-scaffold_192-1491911889:81147..81212Clytia hemisphaericaexon
TCONS_00051025-exon-scaffold_192-1491911889:75231..76171TCONS_00051025-exon-scaffold_192-1491911889:75231..76171Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051025-proteinTCONS_00051025-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_192supercontigscaffold_192:75231..86463 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.18346	4.50452	0	0.291352	2.18706e-08	0	4.39447	1.50255	0	3.87058	2.06662	2.52457	0.00352714	0	0.956538	1.34872	1.27979	0	1.19631	1.27781	1.03368	0.510782	2.72951	5.65303	0	1.56362	0.853457	0	0.0256156	3.81988
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051025 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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