TCONS_00051053 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051053
Unique NameTCONS_00051053
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length802

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051053 ID=TCONS_00051053|Name=TCONS_00051053|organism=Clytia hemisphaerica|type=transcript|length=802bp
ctgagatttaaaaCGTTTCTTACCGACGAGATGAAATTGATGTGGGGTGA
AACATGAGCAAAGTAGTAGACTACCACAACAACCGTCATGAGGGATTTGA
TGCACAAACTTGAAAAGaAAAGGGGGAATGTAGAAATCAcgtttgatgac
atcatcaacGACGAAGCATTAAATGAGATTGAAAGTGAAGATGCtgattt
aaaagatttctttcagAAGATCGAGATTATCAAGGAAGACATTGGCATTA
TTAAGATAAACATTACGAACGTTGATAAACAACAGAATGTTATTTTGACA
TCAACCACCATTACCACTGAACAAGAAACAAGAGAACTATTGGATCAAAC
GATGGCTGATATCTCCAAACGATCACAAAGAACTAAACGTCTACTGAAAG
AAATCAAGGAAGGGGTAGAAGAAGACCAAGAAAACGGAGACAATTCTTCA
CATTGCAGAATGAAAAGGTGCCAGTTTAATGCACTTTCATTGGAGTTTAT
GGACAATATGACGAGATACAATGCCATCCAGGAACTTTTTcgagcaaaat
caaaaagtcgTATCAAGCGTCAGCTAAATATTACGAAAAAGACAGAGGTC
AGTGATGAAGAGCTCGAAGAAATGCTGGAAAATAAAGAACCCATCAACAT
TTTTACACAAGGCATAGTCACAGATACAGATGATGCAAAACGAAGACTGA
AAGAAGTTGAAGATCGGCATAATGATATCATTAAACTAGAAAAGAGTGTA
CAGGAATTGCACTcactttttaaagatatttcaattcttatCGATAAGCA
GG
Run BLAST on NCBI

transcript from alignment at scaffold_193:212533..222613+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051053 ID=TCONS_00051053|Name=TCONS_00051053|organism=Clytia hemisphaerica|type=transcript|length=10081bp|location=Sequence derived from alignment at scaffold_193:212533..222613+ (Clytia hemisphaerica)
ctgagatttaaaaCGTTTCTTACCGACGGTAAGTACCACTGTACCAAAAT
TTATGTTTCTAACTCAAAAATGCACACTTGCACCCATTATTTTGTTCACA
CTTTCCCANATTTATGATTCTAACTCAAAAATGCACACTTGCACCCATTA
TTATGTTCAGACTTTCCCGGGACTATATGGCCTATTTTTGACTGTCATAA
AATTTTCAGGTtagcaacaaaaaaacatcATCAAGGACTCCCATTTTACA
TTTCCTTGTTCGGAAGAAAAATTTTCCCgttacatgaaaaatatgaggaa
aaataattttgttgaattttggaTCCTTTAGAGATGAAATTGATGTGGGG
TGAAACATGAGCAAAGTAGTAGACTACCACAACAACCGTCATGAGGGATT
TGATGCACAAACTTGAAAAGGTAACAATAATCTAActatagaccttatcg
gagtttttgatttttctaaaaaagcgatgcattgtgggattgtttcgagt
gtattacaaaagaaatctcttaggaattcatcgagggaattctattgtaa
tatagtcgaaacaatcccacaatgcatcacttgtttagaaaaataaaaaa
ctccgataaggtctattaaatTCAAATAATAGATCTCACTATCTATGAAA
GAGGTTCTTTGCTTCGTTTATTCTAGGTATTATAAAAGAAATTCTGTGCA
CCGACAAAACGTTTCTTCAATTTAGATTAAATGATCAGTTAACTCGGATG
TCTTGATAGGTGtttcccactggaaaagttTGGCCTAAATATCGTCCACA
GTAGAGCATTATACTCCgatttttgtctccactgaaaataatcaaataaa
caaaaccTCGCTGCAAAATTTAATGCTTTTTTGGGATGGGTCCCTATGAA
TTTTTGAGAAGAAAGTTACCTGAATTTCCggccatgaaaaatatgaaaat
atcaatctccatcgagtttcagtcctttatttttacccccccccctccca
cTGACTAAAAAATCCTActtggtctgtgagaagggggtgtgtataataaa
aataaaaggtcTTACTGTTGACCGATTTATGATAAGTTTttggttttttc
aaaatagatctAATGCAAATGCAATTCAAAATGTTATTGCTCAGTATTTA
ACAATTTTGGGTACAGTACCTAATAAGCGTCCTCACCCATGCGTCCAAAA
TCATTTTCCACTCTTAACTTTCTTATTCAACTAATAAGACATTTTcgcga
gggggggggggttggcaAAAGAATTATTGGCCAAAGGCTAACGTTATATT
CAACTTTCGAAAGAAATTCATGTGGGTTGCGTGCTAGAAAAGTTGTCATG
TATCCTAAGGTTTGGTCCCCTACTATAATCACCCCTATTAGTTTGCAAAC
GACAATTACTTCTGATTCTTTGGCACTAGACTCATAgcgtttaaaatttt
cacataGGATAGGATTAttgtttcaaagaattttaagttttgagtttttt
tatctaGCTTGTATATTCATTAGGTACCCGagggtacacatttttttttg
gttttcagaAAAGGGGGAATGTAGAAATCAcgtttgatgacatcatcaac
GACGAAGCATTAAATGAGATTGAAAGTGAAGATGCtgatttaaaagattt
ctttcagAAGGTAATCTAaatattagcctggatatcacCCAGTTGTAAAC
ATAGATTTGTAAAGCCCGAACGAAGGGCTAGATATAAAGCTTTTGCTGAA
aggtgtgccgtggttaggcaggaaatcctacctaagtcacgtgacattac
aataaaatttcagcgATTGACCAATGAGAAGCTTCGCGGGcctttcgaaa
acaatagcaacaatattttttccgatattcactttttttttgcctgctaT
GGCTTAAAacccgacatctagccctttagGCTTTACAAATCTATGGTTGT
AAACTGCTTTCTTATAGGTTTTGGTTTAagttgatatcgtttgcttactt
catcaatttcaagcaatttgacattgaaatgacatgaatgtggagcaata
ttggttagaaaaaaggaaagaagaacAATTTTTGGTTTATTTTAGCACAG
AAGGAGGCATCGGCCTGATAtaaaactaaaacctttaattttgatatttt
ttgagtcgacaaatGTTCAGTTCGAGACTATCACAacataaaattttcca
aatatggGTTCTTAAGCAGTTCATACGTTGAAATTCTCATTGCTTTTtct
aataaaagtcaaaagcTAAATGGAGGGAAGAGACTTACTGTTTTCCTTTC
GTGTAACCACCAGATCGAGATTATCAAGGAAGACATTGGCATTATTAAGA
TAAACATTACGAACGTTGATAAACAACAGAATGTTATTTTGACATCAACC
ACCATTACCACTGAACAAGAAACAAGAGAACTATTGGATCAAACGATGGC
TGATATCTCCAAACGATCACAAAGAACTAAACGTCTACTGAAAGGTAAAA
AATGGATTGATTTcacattgttttttttaagaaacacacttttaagaaac
atgaggctcagaatgcctaaaaactaagaaacatctaagaaacatgctga
ggctgagaatgagaaaacaacattttttaattcggttttttaaagaactt
tccaatccagccttccatgaggctgattatgtcaaaaagtttagaaacat
gtaagaaacatttcaggctcaaaatgccgatttcttaagaaacattgagg
ctgcttggtaaaactaatttcttaaagaaaaaacgtgttttgcttttaag
cattttattaagttttgagagaAACTATTACCTAAACACCATATGGTCCA
TGGTCCCCATCTCAATTCCTCAATATTTCTCGCCCGTTCGTCACTTTTCT
CTATCATTCCTCAGTGTTCCAAACTCATTCCTCAGTGTTTCTAACTCATT
CATCTGTGTTCCCAGCTCATTCCTCTGTGTTCCTAACTCATTCCTCTGTG
TTTCTAACTCATTCCCCAGTGTTCCTAACCCATTCATCAGTGTTCCAAAC
TCATTCCTCTGTGTTTCTAACCCATTCCTTTGTCTTTCTAACTCATTCCT
CAGTGTTCCTAACCCATTCCCCAGTGTTCCTAACTCATTCCCCAGTGTTC
CTAACTCATTCCTAAGTGTTCCTAACTCATTCATCAGTGTTCCTAGCCCA
TCCCTCATTGTTCCTAACCCATTCCCCAGTGTTCCTAACTCATCCCCCAG
TGTTCCTAACTCATTCCTCAGTGCTCCTAATCCATTCCCCAGTGTTCCAA
ACTCATTCCTCAGTGTTTCTAACTCATTCATTTGTGTTCCCAACTCATTC
CTCTGTGTTCCTAACTCATTCCTCTGTGTTTCTAACTCATTCCCCAGTGT
TTCTAACCCATTCATCTGTGTTTCTAACTCATTCCTCTGTGTTTCTAACT
CATTCCTCAGTGTTCCTAACCCATTCCCCAGTGTTTCTAACTCATTCCTA
AGTGTTCCTAACTCATTCCTCAGTGTTTCTAACTCATTCATCAGTGTTCC
TAGCCCATCCCTCATTGTTCCTAACCCATTCCCCAGTGTTCCTAACTCAT
TCCCCAGTGCTCCTAACTCATTCCTCAGTGTTCCTAATCCATTCACCAGT
GTTCCTAACTCATTCCTATATGTTCATAACTCATCCCTCTGTGTTTCTCA
ATCATTCCTCATTGTTCCTAACTCATTCCTCTGTGTTTCTAACTAATTCT
TCAGTGTTTCTAGCCCATTCCCCAGTGTTCCTAACTCATTCCTATGTGTT
CCTAACTCATTCCTCTGTGTTCCTAACTCATTCTTCAGTATTCCAAACTC
AATTCTCAGTGTTCCTAACTCATTCCTCAGTGTTCCTAACCCATTCCCCA
GTGTTCCTAACTCATTCCTCTGTGTTCCTAACTCATTCTTCAGTATTCCA
AACTCAATTCTCAGTGTTCCTAACTCATTCCTCAGTGTTCCTAAGTCATC
AGAGCTGCTTATTCATTCCATTTTAAACGTCCTTTTACTATTCCTCAAGA
ATGGACATAAATTCTTCTAAAAGCGCCCAAAACCGGTTCCTCGGGAATGA
GCTATATTTAGTGATTATAGTTAACCCTTAGTTAACTAATCTAAACATat
tcaaaataaacattttttaaccttgtTCTAAGTTATTAGTGTTATTAGTG
TTAATTATAATACTCATCTTATTTCATTTCCAAAGAAATCAAGGAAGGGG
TAGAAGAAGACCAAGAAAACGGAGACAATTCTTCACATTGCAGAATGAAA
AGGTGCCAGGTAAAAGAAAATacatatacacgcttttttttataagaata
tcttctaccTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccttctagatcaggag
atataagcccttaaagtttgaactagcgatttttaaaaaaaaacttagaa
aaaaggaccctggcactcaaagggttaagggaactattttttgcgggaac
taatttttgcggttcgcagttcaagatttaatatttaatatttgcgggaa
cttaaagggataatcagatggtttgagatattttgcctatagatagcttc
taggattttaggaaaaatttctaaattttttggtgtacttattttcctaa
ctaAAGTTATACCACTTTGAAATGTTGaacttttgcttgaaaacaataga
aaaaagtgtgaaaagaCCCTGAAAAGTCCCATTTTTCGAGATTTCAAATT
GGCATAACTTGAGTTAAGAAAATaaatacaccgaaaaatttagaggtttt
tcctaaaatcctagaagctatctgcaggcaaaatatctcagaccatctga
ttatccctttaatttTGTGGATTTCTCACTTGAAAGAGAATTAGAGGCGT
GCTGTGAATTAtttagctgggagacccgtctactctgttcgtgtgatttc
ggagtatagcatttagttaaaaggaataaaaatatagaaataacagagta
gcccagagtagccgggtatttttgtagatgccaaatctggtcgcagaatt
ctattggctgtcaaacaattgttgaaatcacgtgatattattgttttgat
tggaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNttatcaacggcttttttggcacgaaat
tcaaagcaaatgtaaacaaattcaaactgggtcaaaaataccatactctc
aatgagtagcttctgatgggacttttgcttttatgtggtgtaagtttgaa
tagggagtatggatctccagactatgaattattcgacctttgtttttcgc
atttgaaacattttgcgggaacttaattttacggtttgggcctaaatccg
caaaaaccgcaaaatttagttcccgcaaaaattagtcaCCTTAAggtata
agaatatcagggtgataattggccaaatcgtaagaataccctaagaataa
cctctagggtgagtttcacagaatttactaagaatacagtcattttgtat
ttggttaatagaaaaaaactgcttcctttgttagacttaactttgaggca
gaaatgtaatttagctcaaaatgttcattcaaaagtctgaaaaagcaaga
atacgttaagaatatttcaccctcaaatttggcaatttcttaagaatact
tgaccctcatccaaagtacactattcttataaaaaaagcgtgtataccaG
GATATACCAGACCAGGGGGGTTCTTGAACAGAAAGGGAGCCGGGGATGTg
ctgctggtcagggtacctttctCACCCCAATGAGTTCCAGGGAAGGGTCG
AAAAAAACCAacatagaaaaatcagtccctcgtagagCATCTTTTCGGGA
GAATATGGGGaaaatttgtataattttgggaaaaaggtgaacaattttga
gaaaattttggtatTCAGTCCCATTAAGGGtaattttttcgcaaatttgg
ttagaattttcaaaaaccaaGTTCGCGGAACATCCCCGTCCGTCAGCAAA
GGTAGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTTAAggta
taagaatatcagggtgataattggccaaatcgtaagaataccctaagaat
aacctctagggtgagtttcacagaatttactaagaatacagtcattttgt
atttggttaatagaaaaaaactgcttcctttgttagacttaactttgagg
cagaaatgtaatttagctcaaaatgttcattcaaaagtctgaaaaagcaa
gaatacgttaagaatatttcaccctcaaatttggcaatttcttaagaata
cttgaccctcatccaaagtacactattcttataaaaaaagcgtgtatacc
aGGATATACCAGACCAGGGGGGTTCTTGAACAGAAAGGGAGCCGGGGATG
TgctgctggtcagggtacctttctCACCCCAATGAGTTCCAGGGAAGGGT
CGAAAAAACCAacatagaaaaatcagtccctcgtagagCATCTTTTCGGG
AGAATATGGGGaaaatttgtataattttgggaaaaaggtgaacaattttg
agaaaattttggtatTCAGTCCCATTAAGGGtaattttttcgcaaatttg
gttagaattttcaaaaaccaaGTTCGCGGAACATCCCCGTCCGTCAGCAA
AGGTAGCACTTCCGAGATACCGGACAATTCAGCTCTCTGGATAACCCCGA
AAAAGATAGTCCAATAATATTGCGTTTTCTACAAGTGGAGCATacccata
tacaaaaatttCTTGACATCCAACCCAGTCTAAATGTGGCATCTGATTTC
AACGTAACGactggaaatattttttctattcaCTTCAGTTTAATGCACTT
TCATTGGAGTTTATGGACAATATGACGAGATACAATGCCATCCAGGAACT
TTTTcgagcaaaatcaaaaagtcgTATCAAGCGTCAGCTAAATATTAGTG
AGTTTTTTTTATCCTGAAGCTTCATAATTCAATCACTTAGAAATTTCAAC
ATTATGCTGTCAGATATACCTCGAAAAGGGTCTTAAAGTTTAAGAAACAG
TCCTCGTAGGAAAATTGCAATAGGAAAAAATTGCTGCCGAGCTGGAACAA
AacatgttgtttcaacgttcatctatgTTCCAGTTGGGCATTTATGGTGG
AGAAAAAGAATTAACATACCAGATGTCGCCACAATAATTTCTCAAATCGG
TATCGATCGCACATCTTGACCTTcttacacgttttctttattCTTGTTTT
CAGCGAAAAAGACAGAGGTCAGTGATGAAGAGCTCGAAGAAATGCTGGAA
AATAAAGAACCCATCAACATTTTTACACAAGGCGTAAGCAACTTTTagca
aaataatattttccaaATTAAGTGGAAGTGTACTCGAAAAttagaattgt
ttttttctaGATGGGTCATTCCATTAAATTTCTGTTGTTTGAGGGAAGAG
GGGGATTTGAGCGAGCTTTTTCAATTCGAAACATTTCTTGGATACGTGTT
ggccccccccctgaaaaatggcaaaaattgcaaaaaaaaaccttggaaaa
ttcttttcatacatgaaagtgacggtggacgaactaaagTCAGTCTTTTA
CCCTACTGGAAATAGAATGACCCAATAAAACACCCCTTTTCATTAACAAT
AATCTTATAAAATAATCACATAGAGGCCAATACTTAAAAAACAATCTCAG
CCTAATATTTTAGGAATGGTCAACCCAAGGCCATTTTTCGCCAACAAATG
AAGTAACCCAACATACTACCTTCAAGAAGCCTGAAAATTACAATACAAAT
AAGAATAACCGACCCCCAGCCAAAGTTTTCACTGatctaaaatataacaa
ataacatgctgaatggacctacctgatgatgagaatcagataaaaatagg
acaaatagcaagagagtaagaaagtgtaGTGAGTAGtcccaaaaataaaa
taaaaacaaataaagcaATTTCACACTTAGTccaaaaaccccatttttag
agactttttggcccaagtttgcccaacaaaaaaattcaaaatcgggctcc
gtcactttttgggaattgccattttgcatcaccgtgcaaaaaatcagaaa
aaaactaatgagccaatcccgagaaacgaacgaacggacgaacgaacgga
cggacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacg
aacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacgaacatc
ggttaatttacAATTCtacccaccggggtaggtccaaaatttACGATTCT
AGAGTTCTATTCTCTTCCATTTAGATAGTCACAGATACAGATGATGCAAA
ACGAAGACTGAAAGAAGTTGAAGATCGGCATAATGATATCATTAAACTAG
AAAAGAGTGTACAGGTCGGTATCTAGCTTGTCACTTAAacgaaaaccgtt
tttttttaatttggttcAGTGGAAAAATACTTGCTAACTAGCCAGCCTCA
TCTCAAATGAACCCTATGcttaagaaaaaaatgataatgTAATGTGATTT
TTCATCTATATCATACTCTACATATTCAAATGGTTATAAAAGCATGTAAT
CTGTTATAGATGCTCCTCAGGAGttttaaaaattaagaaaactcAAGGAA
ATCTTTGCTCGCGTGGGAGAAAAAAAgtcgttcttttgttttgaatttga
tgGTCCAAAGAAAGTGTCGAAAGTACTCTCGGGAATATACCTAACAAaca
gggggtttggaataagcgggttgggtggaaaaattctcaaaacttaataa
gcgggttgggtggaaaaattctcaaaacttaataagcggcgGGGCGGATg
gaggttggaataaaaatatcctgggtgggaaattttcgaaaaattaatta
gcaagGGGAGGCTCATTAGGTAGCCGAGAGTATAGGCGCATATCCAGGAA
TAAATTTAGAATATGACAATAAGAGCAAACTTAGAGCTTTTTTCGCTAAT
TTTAAATAATCTTCACTCACCGTGTTATGAATTTTGATCTCATTCTTTTA
CGAATTTATATCAGACGATTTCAGCAATGTCGGTCATCTATCTTCATGTA
GAGGAAGTGGAGGAAgcaaatactttaggcgtacaaactttcacgagcag
aaactttcatgaatttgaggaaaaaatgtttttcgcgagcatataCTTTC
GCAAATcattggataaaaatgagaatttccCCGAATTTCCGAATAAAAAT
TGCCTTAAcagtgaaaaatatttcttaaatccGCTACAGACGGTTGCTCT
CCGtctttaaaaaggcattaaagaATAATAATATGCCGAAAATTGGATAT
TTACTACGATTTCGAGGTTTTACCtatagatttccaatttttttgagaat
ttttctcaagcataaaatttcgcgaattgccctgttaagaattttcaaag
acatttactttcgcgaaaaagacCAATATTCGCGAAAAtagcgaaagttt
ctgctcacgaaagtttgtacgtctaAAGTATACTCTTATCAATTAACCCA
AACATGAATAGGGGTTGAGTAGTTCTAGCAGGGTGGTATGATGTCAAATT
TATGTACATCTGTGACCACGAGTACAATTATTTCAAACATTTGACGTCAT
TCAATCTTGGTAAACTTACGCAATCTATAGCTTTGTCCCACATCATATAT
ATGATGGCAACTGGAAAATCCCTGAAAGAGAAGAAATAGATATTTAGATT
GAAATTTTATGCATTTCTTATCTTTTTTACAGGAATTGCACTcacttttt
aaagatatttcaattcttatCGATAAGCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032359XLOC_032359Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051053-exon-scaffold_193-1491911889:212533..212560TCONS_00051053-exon-scaffold_193-1491911889:212533..212560Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:212533..212560TCONS_00051053-exon-scaffold_193-1510915933:212533..212560Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:212533..212560TCONS_00051053-exon-scaffold_193-1575043694:212533..212560Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:212864..212952TCONS_00051053-exon-scaffold_193-1491911889:212864..212952Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:212864..212952TCONS_00051053-exon-scaffold_193-1510915933:212864..212952Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:212864..212952TCONS_00051053-exon-scaffold_193-1575043694:212864..212952Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:214091..214192TCONS_00051053-exon-scaffold_193-1491911889:214091..214192Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:214091..214192TCONS_00051053-exon-scaffold_193-1510915933:214091..214192Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:214091..214192TCONS_00051053-exon-scaffold_193-1575043694:214091..214192Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:214846..215026TCONS_00051053-exon-scaffold_193-1491911889:214846..215026Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:214846..215026TCONS_00051053-exon-scaffold_193-1510915933:214846..215026Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:214846..215026TCONS_00051053-exon-scaffold_193-1575043694:214846..215026Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:216768..216841TCONS_00051053-exon-scaffold_193-1491911889:216768..216841Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:216768..216841TCONS_00051053-exon-scaffold_193-1510915933:216768..216841Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:216768..216841TCONS_00051053-exon-scaffold_193-1575043694:216768..216841Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:219621..219729TCONS_00051053-exon-scaffold_193-1491911889:219621..219729Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:219621..219729TCONS_00051053-exon-scaffold_193-1510915933:219621..219729Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:219621..219729TCONS_00051053-exon-scaffold_193-1575043694:219621..219729Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:220036..220115TCONS_00051053-exon-scaffold_193-1491911889:220036..220115Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:220036..220115TCONS_00051053-exon-scaffold_193-1510915933:220036..220115Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:220036..220115TCONS_00051053-exon-scaffold_193-1575043694:220036..220115Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:221107..221196TCONS_00051053-exon-scaffold_193-1491911889:221107..221196Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:221107..221196TCONS_00051053-exon-scaffold_193-1510915933:221107..221196Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:221107..221196TCONS_00051053-exon-scaffold_193-1575043694:221107..221196Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1491911889:222565..222613TCONS_00051053-exon-scaffold_193-1491911889:222565..222613Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1510915933:222565..222613TCONS_00051053-exon-scaffold_193-1510915933:222565..222613Clytia hemisphaericaexon
TCONS_00051053-exon-scaffold_193-1575043694:222565..222613TCONS_00051053-exon-scaffold_193-1575043694:222565..222613Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_193supercontigscaffold_193:212533..222613 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.49507e-06	0	0	0	0	0	0	0	0.33935	0.0120252	1.05272	0	0.763652	1.03815	0.175024	0.632191	0	0.497542	0.363565	0.213237	0.0421307	0	0	0	0.235632	0.901527	0	0	0	0
Blast
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BLAST of TCONS_00051053 vs. Swiss-Prot (Human)
Match: STX1A (Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.571e-25
Identity = 55/150 (36.67%), Postives = 97/150 (64.67%), Query Frame = 1 
Query:  352 MADISKRSQRTKRLLKEIKEGVEEDQENGDNSSHCRMKRCQFNALSLEFMDNMTRYNAIQELFRAKSKSRIKRQLNITKKTXXXXXXXXXXXXXXXPINIFTQGIVTDTDDAKRRLKEVEDRHNDIIKLEKSVQELHSLFKDISILIDKQ 801
            M+DI K + + +  LK I++ +E+++    +S+  R+++ Q + LS +F++ M+ YNA Q  +R + K RI+RQL IT +T  S+E  + +        IF  GI+ D+  +K+ L E+E RH++IIKLE S++ELH +F D+++L++ Q
Sbjct:   79 MSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPA--IFASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQ 226
The following BLAST results are available for this feature:
BLAST of TCONS_00051053 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STX1A4.571e-2536.67Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1[more]
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