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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051261 ID=TCONS_00051261|Name=TCONS_00051261|organism=Clytia hemisphaerica|type=transcript|length=1177bp
attATGAAGAAAACTCAAATTGCAGGTGGTTCAAAACAGAAACAAAATTC
GAATtggaaagtttttgatttttgtaaccaATTCCTACAAACTAGAGAAG
ACCTTTCTTCAATGACGTATCAATTAGTAAATAATTTGTTTAACGATCAT
GGAGTGAATTATATCGAAATACGATTTGCGCCCGTTTTACATACACTTAA
GAACTTAACTGAGTTAGAAGCCGTTCGGGCTGTTGTAGAGGGGTTCAAAA
ATGCAGTGAAACATTTTAAAGATAACCAAAACGTCGAGATAAAAGGTGGA
AtcattctttgtattttacGATCGTACCCGCCTAAAAAAGCTTTCGAAAC
GCTTGACTTATATTCGCAGAGTAATGATGTTCTTGCCATAGACGTAGCCG
GAGACGAGGGGAGTTATCCCCTGGAGCTTTTCAAGGACGTTTTGGTTGAA
GCTCGGAGACGTCAAATTCCGATCACGGTTCATGCTGGAGAATGGAACGA
ACACACTAACGCTACCATTATTGATAATGTGAATCTAGCCGCTGATATCG
GTGTACAACGAATAGGACACGGGCTAGCTTTACGATCTTGTGACGAGTCT
ATTTACGAGGAATACCGTCTTAAAGACATTAGTATTGAAGTCTGTTTGAC
TAGTAACTGCGGCAATAAAACGAAATGCGAGTCATTTGCCAAACATCCTA
TTAAAAAATTCATTCGAAAAGGATTAAAAGTTTCTGCACTAAATGTTGAT
AATTTGTTACTTTCTGGAAGCTTGGATATTGGTGCTCCAGACCCTACCAA
TGAATGTGTAAGAGCTATACTCGATTGTGGTTTATCTTCACGAGATTTAC
TCGAGATTATCGAGAACGGTTACAAAGCAGGTTTTGCTACTATTGATCAG
TCGTTCATTGAAAACGCTCTAAACAAATGGAGAACGATTTATTTACCGAA
AATTGAAGATTTGCTATCGAAATATGACATTGTTTCGCAAGCTttacaat
aaaaattaaaattctatATATATAACCTTTCATTTTCTCTTGTGTTTACT
TGGtatatttattttgataaatcttcGTTTTTACTATGcaaagatatctt
tttatatGACACATTATCTCGAACCAAGCTTGAGATTTATTCCGTAAACT
CGACTTGAGACGATATGATCATGAAGg Run BLAST on NCBI protein sequence of TCONS_00051261-protein >TCONS_00051261-protein ID=TCONS_00051261-protein|Name=TCONS_00051261-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
IMKKTQIAGGSKQKQNSNWKVFDFCNQFLQTREDLSSMTYQLVNNLFNDH
GVNYIEIRFAPVLHTLKNLTELEAVRAVVEGFKNAVKHFKDNQNVEIKGG
IILCILRSYPPKKAFETLDLYSQSNDVLAIDVAGDEGSYPLELFKDVLVE
ARRRQIPITVHAGEWNEHTNATIIDNVNLAADIGVQRIGHGLALRSCDES
IYEEYRLKDISIEVCLTSNCGNKTKCESFAKHPIKKFIRKGLKVSALNVD
NLLLSGSLDIGAPDPTNECVRAILDCGLSSRDLLEIIENGYKAGFATIDQ
SFIENALNKWRTIYLPKIEDLLSKYDIVSQALQ Run BLAST on NCBI transcript from alignment at scaffold_20:188687..189863 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051261 ID=TCONS_00051261|Name=TCONS_00051261|organism=Clytia hemisphaerica|type=transcript|length=1177bp|location=Sequence derived from alignment at scaffold_20:188687..189863 (Clytia hemisphaerica)
cCTTCATGATCATATCGTCTCAAGTCGAGTTTACGGAATAAATCTCAAGC
TTGGTTCGAGATAATGTGTCatataaaaagatatctttgCATAGTAAAAA
CgaagatttatcaaaataaatataCCAAGTAAACACAAGAGAAAATGAAA
GGTTATATATatagaattttaatttttattgtaaAGCTTGCGAAACAATG
TCATATTTCGATAGCAAATCTTCAATTTTCGGTAAATAAATCGTTCTCCA
TTTGTTTAGAGCGTTTTCAATGAACGACTGATCAATAGTAGCAAAACCTG
CTTTGTAACCGTTCTCGATAATCTCGAGTAAATCTCGTGAAGATAAACCA
CAATCGAGTATAGCTCTTACACATTCATTGGTAGGGTCTGGAGCACCAAT
ATCCAAGCTTCCAGAAAGTAACAAATTATCAACATTTAGTGCAGAAACTT
TTAATCCTTTTCGAATGAATTTTTTAATAGGATGTTTGGCAAATGACTCG
CATTTCGTTTTATTGCCGCAGTTACTAGTCAAACAGACTTCAATACTAAT
GTCTTTAAGACGGTATTCCTCGTAAATAGACTCGTCACAAGATCGTAAAG
CTAGCCCGTGTCCTATTCGTTGTACACCGATATCAGCGGCTAGATTCACA
TTATCAATAATGGTAGCGTTAGTGTGTTCGTTCCATTCTCCAGCATGAAC
CGTGATCGGAATTTGACGTCTCCGAGCTTCAACCAAAACGTCCTTGAAAA
GCTCCAGGGGATAACTCCCCTCGTCTCCGGCTACGTCTATGGCAAGAACA
TCATTACTCTGCGAATATAAGTCAAGCGTTTCGAAAGCTTTTTTAGGCGG
GTACGATCgtaaaatacaaagaatgaTTCCACCTTTTATCTCGACGTTTT
GGTTATCTTTAAAATGTTTCACTGCATTTTTGAACCCCTCTACAACAGCC
CGAACGGCTTCTAACTCAGTTAAGTTCTTAAGTGTATGTAAAACGGGCGC
AAATCGTATTTCGATATAATTCACTCCATGATCGTTAAACAAATTATTTA
CTAATTGATACGTCATTGAAGAAAGGTCTTCTCTAGTTTGTAGGAATtgg
ttacaaaaatcaaaaactttccaATTCGAATTTTGTTTCTGTTTTGAACC
ACCTGCAATTTGAGTTTTCTTCATaat Coding sequence (CDS) from alignment at scaffold_20:188687..189863 >TCONS_00051261 ID=TCONS_00051261|Name=TCONS_00051261|organism=Clytia hemisphaerica|type=CDS|length=1002bp|location=Sequence derived from alignment at scaffold_20:188687..189863 (Clytia hemisphaerica)
ttattgtaaAGCTTGCGAAACAATGTCATATTTCGATAGCAAATCTTCAA
TTTTCGGTAAATAAATCGTTCTCCATTTGTTTAGAGCGTTTTCAATGAAC
GACTGATCAATAGTAGCAAAACCTGCTTTGTAACCGTTCTCGATAATCTC
GAGTAAATCTCGTGAAGATAAACCACAATCGAGTATAGCTCTTACACATT
CATTGGTAGGGTCTGGAGCACCAATATCCAAGCTTCCAGAAAGTAACAAA
TTATCAACATTTAGTGCAGAAACTTTTAATCCTTTTCGAATGAATTTTTT
AATAGGATGTTTGGCAAATGACTCGCATTTCGTTTTATTGCCGCAGTTAC
TAGTCAAACAGACTTCAATACTAATGTCTTTAAGACGGTATTCCTCGTAA
ATAGACTCGTCACAAGATCGTAAAGCTAGCCCGTGTCCTATTCGTTGTAC
ACCGATATCAGCGGCTAGATTCACATTATCAATAATGGTAGCGTTAGTGT
GTTCGTTCCATTCTCCAGCATGAACCGTGATCGGAATTTGACGTCTCCGA
GCTTCAACCAAAACGTCCTTGAAAAGCTCCAGGGGATAACTCCCCTCGTC
TCCGGCTACGTCTATGGCAAGAACATCATTACTCTGCGAATATAAGTCAA
GCGTTTCGAAAGCTTTTTTAGGCGGGTACGATCgtaaaatacaaagaatg
aTTCCACCTTTTATCTCGACGTTTTGGTTATCTTTAAAATGTTTCACTGC
ATTTTTGAACCCCTCTACAACAGCCCGAACGGCTTCTAACTCAGTTAAGT
TCTTAAGTGTATGTAAAACGGGCGCAAATCGTATTTCGATATAATTCACT
CCATGATCGTTAAACAAATTATTTACTAATTGATACGTCATTGAAGAAAG
GTCTTCTCTAGTTTGTAGGAATtggttacaaaaatcaaaaactttccaAT
TCGAATTTTGTTTCTGTTTTGAACCACCTGCAATTTGAGTTTTCTTCATa
at
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051261-exon-scaffold_20-1491911889:188687..189863 | TCONS_00051261-exon-scaffold_20-1491911889:188687..189863 | Clytia hemisphaerica | exon |
| TCONS_00051261-exon-scaffold_20-1510915933:188687..189863 | TCONS_00051261-exon-scaffold_20-1510915933:188687..189863 | Clytia hemisphaerica | exon |
| TCONS_00051261-exon-scaffold_20-1575043694:188687..189863 | TCONS_00051261-exon-scaffold_20-1575043694:188687..189863 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:188687..189863 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019239 | deaminase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0019239 |
deaminase activity |
Blast
The following BLAST results are available for this feature:
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