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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051306 ID=TCONS_00051306|Name=TCONS_00051306|organism=Clytia hemisphaerica|type=transcript|length=460bp
attttcatctttttaagGGTCGAGAAGATTACACCAAAAGAGGTTGCATT
CACAGCTGAAGAAACTTCCATTATCTACACTGTTCAATGTTGGAAGATTA
AAAATGAAACGAAAATAATTGAATCTGTCAAAAATGTAACATCAACAAAC
ATAAACCAAAAAGTTTGGATACAGTGTGAAGTAGATATCAAAAGTGGATA
TACATATGAATTCGTTTTCAATACTGACAGAGCTGATGACTCCAAAATCA
TTGTTCAACTTCCGCGCAATCGTCATCATACAAGTAGGAAAGGAGAAACA
TTAGTCTACGCTCATAATTGTGGAAGGCCTTCCAATATACACGCATTCGA
AGTTTCGAACGAGAATGGAATCACAGATGACGATACATGTATCCCAATCA
GCACCGGTCCTTCAGTTGCCAACACTGTCAAAGAATTCAATCAAAGAGCA
ATGCAGTANN Run BLAST on NCBI protein sequence of TCONS_00051306-protein >TCONS_00051306-protein ID=TCONS_00051306-protein|Name=TCONS_00051306-protein|organism=Clytia hemisphaerica|type=polypeptide|length=153bp
IFIFLRVEKITPKEVAFTAEETSIIYTVQCWKIKNETKIIESVKNVTSTN
INQKVWIQCEVDIKSGYTYEFVFNTDRADDSKIIVQLPRNRHHTSRKGET
LVYAHNCGRPSNIHAFEVSNENGITDDDTCIPISTGPSVANTVKEFNQRA
MQX Run BLAST on NCBI transcript from alignment at scaffold_200:243959..245217+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051306 ID=TCONS_00051306|Name=TCONS_00051306|organism=Clytia hemisphaerica|type=transcript|length=1259bp|location=Sequence derived from alignment at scaffold_200:243959..245217+ (Clytia hemisphaerica)
attttcatctttttaagGGTCGAGAAGATTACACCAAAAGAGGTTGCATT
CACAGCTGAAGAAACTTCCATTATCTACACTGTTCAATGTTGGAAGATTA
AAAATGAAACGAAAATAATTGAATCTGTCAAAAATGTAACATCAACAAAC
ATAAACCAAAAAGTTTGGATACAGTGTGAAGTAGATATCAAAAGTGGATA
TACATATGAATTCGTTTTCAATACTGACAGAGCTGATGACTCCAAAATCA
TTGTTCAACTTCCGCGTAAGACTTGCCTGGAAAATTTATTTAGGGAAAAT
CATTTTGAAGATTAGGggctacaatcagtgccataacgtattggcacttt
tggctaatttaccatttttcgaaaattgaagttcgagcgagaatgtcaat
agacgatatcggctttccgaattctccccgaatgattacccatgatgcat
tgcgcaaaaaaattcacggatgATATCGactttccgtgaattttttgcgc
aatgcatcatgggtaatcattcggggagaatttggaaagccgatatcgtc
tatttcgggccttcaacttggtttcaacgattatttcgatctgggaggga
tttattggtttctaggctatatttcaagccctactggaccatttttgaac
ttttggatccttatatcctaaggtcgtaagtcttaaCTCCTTCAATACCT
TGGGAAACGTaattttaggtttttttcaAAGTGGCGATGTGCAAACTTCA
AATGCAATTTTCTCGGCATTAGTTGAATCAAAATAGGTCATGTTTGGGTN
AGGTCTTAAgtttagcgttaaaactcagagttaaaactctacccttcgaa
cctactttagagcacttgcaaatcgattgtggtttcaaaacacccctgtg
gatttcctttttgtgccaagtatttcgtcACCGACTGTAGATACTTTTTG
ATATTCTCGTAATACtatcaattgaaaaaaatttaaaggaaatatTGATA
GGACTTTAACTATTTATGGGATCTGATTTTATTGTGACTTTAGGAAACTC
TCATTTCTTTCCAGGCAATCGTCATCATACAAGTAGGAAAGGAGAAACAT
TAGTCTACGCTCATAATTGTGGAAGGCCTTCCAATATACACGCATTCGAA
GTTTCGAACGAGAATGGAATCACAGATGACGATACATGTATCCCAATCAG
CACCGGTCCTTCAGTTGCCAACACTGTCAAAGAATTCAATCAAAGAGCAA
TGCAGTANN Coding sequence (CDS) from alignment at scaffold_200:243959..245217+ >TCONS_00051306 ID=TCONS_00051306|Name=TCONS_00051306|organism=Clytia hemisphaerica|type=CDS|length=918bp|location=Sequence derived from alignment at scaffold_200:243959..245217+ (Clytia hemisphaerica)
attttcatctttttaagGGTCGAGAAGATTACACCAAAAGAGGTTGCATT
CACAGCTGAAGAAACTTCCATTATCTACACTGTTCAATGTTGGAAGATTA
AAAATGAAACGAAAATAATTGAATCTGTCAAAAATGTAACATCAACAAAC
ATAAACCAAAAAGTTTGGATACAGTGTGAAGTAGATATCAAAAGTGGATA
TACATATGAATTCGTTTTCAATACTGACAGAGCTGATGACTCCAAAATCA
TTGTTCAACTTCCGCGCAATCGTCATCATACAAGTAGGAAAGGAGAAACA
TTAGTCTACGCTCATAATTGTGGAAGGCCTTCCAATATACACGCATTCGA
AGTTTCGAACGAGAATGGAATCACAGATGACGATACATGTATCCCAATCA
GCACCGGTCCTTCAGTTGCCAACACTGTCAAAGAATTCAATCAAAGAGCA
ATGCAGTANattttcatctttttaagGGTCGAGAAGATTACACCAAAAGA
GGTTGCATTCACAGCTGAAGAAACTTCCATTATCTACACTGTTCAATGTT
GGAAGATTAAAAATGAAACGAAAATAATTGAATCTGTCAAAAATGTAACA
TCAACAAACATAAACCAAAAAGTTTGGATACAGTGTGAAGTAGATATCAA
AAGTGGATATACATATGAATTCGTTTTCAATACTGACAGAGCTGATGACT
CCAAAATCATTGTTCAACTTCCGCGCAATCGTCATCATACAAGTAGGAAA
GGAGAAACATTAGTCTACGCTCATAATTGTGGAAGGCCTTCCAATATACA
CGCATTCGAAGTTTCGAACGAGAATGGAATCACAGATGACGATACATGTA
TCCCAATCAGCACCGGTCCTTCAGTTGCCAACACTGTCAAAGAATTCAAT
CAAAGAGCAATGCAGTAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051306-exon-scaffold_200-1491911889:243959..244223 | TCONS_00051306-exon-scaffold_200-1491911889:243959..244223 | Clytia hemisphaerica | exon |
| TCONS_00051306-exon-scaffold_200-1510915933:243959..244223 | TCONS_00051306-exon-scaffold_200-1510915933:243959..244223 | Clytia hemisphaerica | exon |
| TCONS_00051306-exon-scaffold_200-1575043694:243959..244223 | TCONS_00051306-exon-scaffold_200-1575043694:243959..244223 | Clytia hemisphaerica | exon |
| TCONS_00051306-exon-scaffold_200-1491911889:245023..245217 | TCONS_00051306-exon-scaffold_200-1491911889:245023..245217 | Clytia hemisphaerica | exon |
| TCONS_00051306-exon-scaffold_200-1510915933:245023..245217 | TCONS_00051306-exon-scaffold_200-1510915933:245023..245217 | Clytia hemisphaerica | exon |
| TCONS_00051306-exon-scaffold_200-1575043694:245023..245217 | TCONS_00051306-exon-scaffold_200-1575043694:245023..245217 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_200 | supercontig | scaffold_200:243959..245217 + |
Blast
The following BLAST results are available for this feature:
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