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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051363 ID=TCONS_00051363|Name=TCONS_00051363|organism=Clytia hemisphaerica|type=transcript|length=276bp
GTTGAGAATGTGGAGTTAAATCCTGATGAATGTCCGCTAGCTTTCCAAAC
AAAATGGACCGATATGTCAACTTATCGCTTCGAATTGAAATCCAAGATTG
ATGGCTATATCGTGATCAACAACGAGGAAAACAGTTCAGGAGATGGAGAT
CAATCAACCATCAAACTTGGTGTCAGCAACACTACAAGAGTTGTTGATAT
TCTACCTATACTTGGCAAGAAATTCATGGTAGCTGACAAACCAAATATGT
TGAGGTTGAAGTCCCATAATCAAGGT Run BLAST on NCBI transcript from alignment at scaffold_201:577..2585+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051363 ID=TCONS_00051363|Name=TCONS_00051363|organism=Clytia hemisphaerica|type=transcript|length=2009bp|location=Sequence derived from alignment at scaffold_201:577..2585+ (Clytia hemisphaerica)
GTTGAGAATGTGGAGTTAAATCCTGATGAATGTCCGCTAGCTTTCCAAAC
AAAATGGACCGATATGTCAACTTATCGCTTCGAATTGAAATCCAAGATTG
ATGGCTATATCGTGGTAAGTTTCCTTGCACGAATCTCGAAGCTCTAATCA
AGGACAAAAGGCtgtaaacttttcaaaattaaaaaaagaaaattctctaA
AATGGCCAGAATTCCCCCCAATTCATCCCTTCAATGTTGTAGTGGGATAG
TCACACGACATCGCCACATCTTACTCAAAATAACATTGAAGGGAGGGGAT
TTTTATGAAACTCTACATACCTTTTGTCCGGGATTGTTGTCTACCATTAT
TATAATTGTATACGTCACGTGAGTTCCTTGCACAATATTATTAAATCCAA
GTTAATGTGAAATTCTGAACTTTGTGCGTTATCTAGTGTGCTTTGCATTT
GCTTATCATCTTCCTTTTCAGCGATTAATTACCGTTAATTTTgcgttttc
gcgagtttttgCCCTTCGTAAAATATGTTACGTAGTTTAAAGGGCCACTT
TCATCcgatttgcgaaattaaatccacgtggaatttttcaaaaacgctGA
TCCgtaaacaggggggggggtatcgagtcagtgtactggcccatagctgg
tggggtagtgtattttttaggttaaattgagttagtacagtgtactaaaa
gggtggtcctctgagaaaaatacaatgaaaaagttagtgcagtgtactaa
aagggtggtcctctgagaaaaatacaatgaaaaagttagtacagtgtact
aaaagggtgatcctctgagaaaaatacaatgaaaaagttagtacactgta
ctaaaaagggtggtgttcTGAATTGATACACACTGAGAAGTTAGTACAAT
GTACTAATTTCAGTAgtaaaaacacacaaacccAGTGAATTCCAATGTAT
ATTTGGCATAATTTGCCAGGTCCAAGCTGGTCCGAGACCTTCAAGTCAAG
GCTGGCTAAGCTATACAAATTGGTACACTGATTTTCTCCCAATGTTTCCT
GTTTacttgattggatttgttttagagTCGCAGCATGCGCAAGTAGAGAC
CGGCCTTAATTCCAATCTTGTTTACGTTTTCTTTAAGGCCCTATCTACAT
TATGGCAACAACAAGAATTTGAATGTGTAAACGTTCGAATCGAAGCTTtc
aagttttataaaaacacatccgctctattgttttatgttttttagtAACC
TTGTTGGATTGatgttaattgaaaaaaaatctgtatataagtgaaatcac
cggggggagggggtgaaaacgaccgtacgttcggccaaaaattaggtctc
taaaatcggtcccttacagtgcaggaaaaatttggctgaagaTCGATCCT
TATAgtgtaatttttcgaaattttttgcccttttcagggcaaaatttttt
gaaatttctcaaattttacctcaaaatttttacacccttacagtgcactt
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacagtgcactttttcccac
ttgctcacaaatcaacccttacagtgcactttccaaagtccaaaaaacct
acccttaagggccgcacgtccagtaggtcacttacctggagtgtactaca
gtgtactaaaaagggtggtggtctaattttttggaaaaaaatccaaaaat
caagttagtaccctatggtccagtacactgacttggtaccccccccctgc
cgcaaaaataaatccagaaaatttcacaaatattTTTGGCTCGCGAAATT
ATATCTCGCGAATATTTTTTccgattaaaatttttttcttctcacAGATC
AACAACGAGGAAAACAGTTCAGGAGATGGAGATCAATCAACCATCAAACT
TGGTGTCAGCAACACTACAAGAGTTGTTGATATTCTACCTATACTTGGCA
AGAAATTCATGGTAGCTGACAAACCAAATATGTTGAGGTTGAAGTCCCAT
AATCAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051363-exon-scaffold_201-1491911889:577..690 | TCONS_00051363-exon-scaffold_201-1491911889:577..690 | Clytia hemisphaerica | exon |
| TCONS_00051363-exon-scaffold_201-1510915933:577..690 | TCONS_00051363-exon-scaffold_201-1510915933:577..690 | Clytia hemisphaerica | exon |
| TCONS_00051363-exon-scaffold_201-1575043694:577..690 | TCONS_00051363-exon-scaffold_201-1575043694:577..690 | Clytia hemisphaerica | exon |
| TCONS_00051363-exon-scaffold_201-1491911889:2424..2585 | TCONS_00051363-exon-scaffold_201-1491911889:2424..2585 | Clytia hemisphaerica | exon |
| TCONS_00051363-exon-scaffold_201-1510915933:2424..2585 | TCONS_00051363-exon-scaffold_201-1510915933:2424..2585 | Clytia hemisphaerica | exon |
| TCONS_00051363-exon-scaffold_201-1575043694:2424..2585 | TCONS_00051363-exon-scaffold_201-1575043694:2424..2585 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:577..2585 + |
Blast
The following BLAST results are available for this feature:
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