TCONS_00051432 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051432
Unique NameTCONS_00051432
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2567

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051432 ID=TCONS_00051432|Name=TCONS_00051432|organism=Clytia hemisphaerica|type=transcript|length=2567bp
AACAGATAAGAAAAATGATGACTTCAAATCAGTTAAAAATTGACATGATA
GCAGCTGAGCAGAAAGCTGGAAAAGTGAAGATGGAAGAAACATGTGAGCA
TCAGATCACCCATTTCGCTGTtcgttttgaaagaaaatgtcgaTCCTTTT
TCACAGGTGAATGCATAGAGGGTTTTATTGATGTGGATGTTAACACAAGT
CGAATATTGGAAGATATTGCATTGCTTTTTCGTGGGGAGACGTTAGCCTG
TTGGCAAGACAATGAAGAGGCTGGACAACAGAATACCATGCGTGTACATC
GGTCCCACTGGAAAGACGAAATGATTATTTCTGATCTATCACATGGCACA
GAATCTGGAAATGGTATTATCTCGTTCCCCTTTAAAATGTATTTACCAGA
TGGCAAACTTCCTTCATCTTTTGAAAGCAAATTTGGTGCAGTGAGATATT
GGTTAAAGGTTTCTCTCAGTCCTGGTACTGTCAACTGTCAATATCCTTTC
ACCGTCTTGGAGAAAATCAATGTCAATGATAAGAAATATCAAaaaagTGT
ATCGAGTTTTACGGAGAAGATGATATGTTGGATGTGTTTCCGTTACGGAG
GGATTAGTTTGACTGCAAATATCGATCGATCAGCGTATTGTCCTGGTGAA
GCCATCGCTGTCAACTGTCGCGCTCACAACAAAGCTAATAAAGAAATGGG
CGGACTGAAAGCGAGGCTGGTTCAAACTATACAATATAAATCAGAAgata
acaataaaataaaagaagtGGAGGTTATTCTAAAAGCTATCGGTGGAAAC
CGCATTCAGAGGAATCACACTAAAGTATGGGACAACCAGTTGCTATGGGT
ACCTTCAATACCACCTACAAACAAAGATGGTGATCCTAATGATATCATCA
AAGTTTTATACCATGTACAGATCTCGATGGAGATACCGAACGACGCCGAC
TTGACGTTGAAATTACCCGTCACCATCGGTACCATTCCATGGAAAGATAA
CAAAACTTCACAaatacaacaacaacagcaagaAAAAGACCGATCATGGA
GGTTCATGAAGTGCACAGACGGTAGTGATTGTTTTAACCGATCCAGTAAA
CGATACCAATTCCCAATGCAACCTTTCATCCCGTCAACCATATTCGTTCA
AGATTATCACCCTTTCTTACAAAAACAAGTCAACAACAATCAAACTTTAC
AACGCTCTAAATGGAAAAACGATGAAAGGCAACCTTTACTACAACCAAGA
CACGCGTGAGATGAGtggacttttttgttttgacgaTAGCTTTCGACAGA
TTGGTGAAAGTGGAAAGATAGTTGAGAGTTGAAACCTCTTTTTTATTGGG
ATTGTTAATAtaaatctttgaattttttttcacaaatttttgacGACTAA
TTTTAAGTTTATAAAGTGTGTTTGATAATCAATGATATCGTGAATTTTTT
CTGATTGTTGATATTCATGACTTATTCTTTTACATGGAAACACCCAAAAA
CATCGAGCCTGTGCAAACACCCGCTGTTCTTTGGGTGTTTTCGTATAAGA
TAATAATTATTCATTAATATCATGAATTTCAGAGTATAATATACAGTGCT
GtaacaatgtttttgtgtattttacaaagGTTTTTATTAGTAACGTTCAC
TCATAGCTAATCATTTATTAAACCTGTTGATTTTGGGTCAAAAAGATTCC
TCTACATAGCCCAAACCGAGTGCAGGTGCCAAATTTTCAGGTGCAAGTGT
AGGCGGTTTTTTAACCCCAAGTGCAAAGTTCCGCTATTTTCTCCTCAAGT
GCAGCTAATTTTAGCAATCTTTTgcctttttgggccaatttccgAGGTAT
AGGTGCACCTTGTCCGGGCCATAATTCATCAGGTGCGCTCTTTCAGTGCG
TGAAGTGCAGCCTTGCACTACTGTGCAAACTGGCCAGAGGGTTCTAGCTA
ATGTAATGCTAATGTTATGCTACAATATGAATTTTTAGAATGAATTGTCG
ATGTTTGATTGACCCTATAATAATTTATTGTGAAACGTCTATATGTAATT
TGTATATTTTCGATGGAGCTCATTCTTCGAGCTTTCATGACAGTTAAATT
TGATTAGTAAGTTCTTAACTCTatcaataccgagtttatgtatcgaagga
tatcgagggcgacggtaagtgaaatcgatacaaaacaaagtcgatagttg
attgatgtacggctctatatcgcctttgctcacctaaacagacgacggta
ttttggtgtttttaccgtcgtcgagcaaagtggatggtgattttggagac
atctCAACTTTGCTTTACACCGCCCCCTCGATTTacctcgaatacataaa
ctcgctaatactAGGATTTCAGGGGTGGTTCAGGCTAGGGAGGGGGCTTT
ttctgtaccaccccttaacctTAAATGTACGTGTGTCATATAGCTTATAT
AAAAGTCTTCAAATGTAAATCTTACCAACATTTTTATgaaacaattctaa
aaaaagtAAGGCTGAAAGTCTGGGCAAATTTAATAtacaaaaaaagtgag
aaatcataaaaaataaa
Run BLAST on NCBI

transcript from alignment at scaffold_201:583520..592389-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051432 ID=TCONS_00051432|Name=TCONS_00051432|organism=Clytia hemisphaerica|type=transcript|length=8870bp|location=Sequence derived from alignment at scaffold_201:583520..592389- (Clytia hemisphaerica)
AACAGATAAGAAAAATGATGACTTCAAATCAGTTAAAAATTGACATGATA
GCAGCTGAGCAGAAAGCTGGAAAAGTGAAGATGGAAGAAACATGTGAGCA
TCAGATCACCCATTTCGCTGTTCGTTTTGAAAGAAAATGTCGATCCTTTT
TCACAGGTGAATGCATAGAGGGTTTTATTGATGTGGATGTTAACACAAGT
CGAATATTGGAAGATATTGCATTGCTTTTTCGTGGGGAGACGTTAGCCTG
TTGGCAAGACAATGAAGAGGCTGGACAACAGAATACCATGCGTGTACATC
GGTCCCACTGGAAAGACGAAATGATTATTTCTGGTAAGCATTAATACGTA
CAATTTAGTAATCCAAGTATTTAGGGAACTTGTGTCTTGTTATCTTAAGC
TTAATATGTTTTCGATATGTAATATCTGATTAAGAAAAGCCCTTTGGGAT
AGTTATAGTAGAACAAACTTGGCAACAGCGTTTAGCTCAATACATTTAAG
TTCCAGTAACATAAATGACATTCACGGCCATTTCAGTGGAGTGGGTACGT
TACGTCACGCTCATTTTTGACTGGATGCTACCAGTAGTGGCCAATGCACC
GTTTGATAGCGCATGTACAGGTGGCTCAGTCAGGCATAAACTCTCAAATC
GTGGTTGACAAAATCTTGGAATGCTTGCAANTTGGTTTCAGATTATTTTG
ACGCGCTGCTACTGGAAACATTTTTGATAAAATCGTAGGCTGGAAGGTAC
TCAATACAATCGAAGGTATATATATATATTCAATACAATCGAAGGTATTC
AATATGATCGAAGGTAATCGAAAAGTAATCGAAATGATTGAACAAATCGA
AAATGGTTGAAGAAAATGCCATATAATCTAAAGTCGAGTGAGTATTCGAT
CACCGATAAAATTATCAATCATTAAAATTGATTACTTCAATCACAATCGA
ACGTTCGATTAGTACCGTCTGGCATTATATATCTAAAAAATTACAACTAA
AATAAACGCTGGTACTGTATTCCTGAATGTTAAAAAAGTCCATAGGAGAT
GGTCTTTTTTCGTTAAAGGGTGAAACTTCTGAATTTGAATCAATTTCTTT
CAATAATTGTTAGATTTCTTTTGTTCGTGAGCTGTGTGTATGGCTAAACA
TTATAAGTATCCATTCAACATATATATAACTACATGTTTTTGTTGTTCTA
TTATTAAGTATGTTAAAAGAGCGATAACGTAAACTCTTAGGATAAGAATA
GCTAGTTATCATTTTCTAATTTATTTATTTTCTCATCAACAGATAAGAAA
AATGATGACTTCAAATCAGTTAAAAATTGACATGATAGCAGCTGAGCAGA
AAGCTGGAAAAGTGAAGATGGAAGAAACATGTGAGCATCAGATCACCCAT
TTCGCTGTTCGTTTTGAAAGAAAATGTCGATCCTTTTTCACAGGTGAATG
CATAGAGGGTTTTATTGATGTGGATGTTAACACAAGTCGAATATTGGAAG
ATATTGCATTGCTTTTTCGTGGGGAGACGTTAGCCTGTTGGCAAGACAAT
GAAGAGGCTGGACAACAGAATACCATGCGTGTACATCGGTCCCACTGGAA
AGACGAAATGATTATTTCTGGTAAGCACGTACAATTTAGTAATCCAAGTA
TTTAGGGAACTTGTGTCTTGTTATCTTAAGCTTAATATGTTTTCGATATG
TAATATCTGATTAAGAAAAGCCCTTTGGGATAGTTATAGTAGAACAAACT
TGGCAACAGCGTTTAGCTCAATACATTTAAGTTCCAGTAACATAAATGAC
ATTCACGGCCATTTCAGTGGAGTGGGTACGTTACGTCACGCTCATTTTTG
ACTGGATGCTACCAGTAGTGGCCAATGCACCGTTTGATAGCGCATGTACA
GGTGGCTCAGTCAGGCATAAACTCTCAAATCGTGGTTGACAAAATCTTGG
AATGCTTGCAAAAAGTTAAAATACTTCTTTAAATAAGTCTGCTTTCAGAC
AGCGTCGAGATCTCGAGATTAACGACTGATGATTTCAGTGATCTCCTTCT
AATACATAATCAGCTATCATATACGTGCATCCTGTAAGGGTATGCAATCC
ATCGTTGTGCATTTACGAATTGGAAGCGTTGAATTGTACACAGAAGAGAT
TCACTTACGCGAATAGTAGTAGGCCAAAGTTATCAGGTGGATTGCTATGT
TTTGTATACATAAATTACTCTACATGAGTGAAGGTAGAGAGTCTATCAAT
ATATTTCCCTAACACCCTGACTGGAAGTGATTGGGATTCGAACACAGTCC
ATTGCGGTGCAAGTCCGTGATCGAAACCTCCACACTACCAATCGGCTAAA
TTACCCTAGTTTGTTATTTGAAAGAAGAAAATATCTGAAATTTAAATTAT
TTTTCTCATAGATCTATCACATGGCACAGAATCTGGAAATGGTATTATCT
CGTTCCCCTTTAAAATGTATTTACCAGATGGCAAACTTCCTTCATCTTTT
GAAAGCAAATTTGGTGCAGTGAGATATTGGTTAAAGGTTTCTCTCAGTCC
TGGTACTGTCAACTGTCAATATCCTTTCACCGTCTTGGAGAAAATCAATG
TCAATGATAAGAAATATCAAGTAAGTCCATTAACAAGAGAAAATAAACTC
TACGATTGAAGTATCATCTCAATGATTTGATATCCATGATATAAACGATG
TCTTCTGACATTGCATCACGGACCCAATAGCTGATTGGTTGTAAGTGACG
TAAAATCAGTCAATACGTTACTTTCAACCAATCAGCTGTTGAGTCCGTGG
AAGACATTGCAATGGTGCATATCATGAATATGAAGATTTGATATGAAGGT
TACTTTCATACAAGAATTACAGTTGACGCTCTCTAATTCGACGTTTTACT
TCGACGTTCTACTATTCGATGATACGCATCATTATTCCATAATGTTGAAA
GTCACAATCAACAAAGAAACTATCATGAAGGACGCTCCCTTATTCGATGA
AAATCTAATATCCCTTGAGCATCAAATAAGAGAGCGTCAACTTAACTATT
TTGAAGTATGTTCAAGTGGGAAATCCTTTTATTCAAAATTTTACTCAAAA
CTCATTTGAGGATGATTTAGTGGTCTTGGTAGACACTTTTGAGGAATATT
GGTCTATTTGCACGTAAACCAAGATAAGTGTAAATCATATGTTTCGTAGA
AGCAACTTTCATTTTCTTTTTAAGAAAAGTGTATCGAGTTTTACGGAGAA
GATGATATGTTGGATGTGTTTCCGTTACGGAGGGATTAGTTTGACTGCAA
ATATCGATCGATCAGCGTATTGTCCTGGTGAAGCCATCGCTGTCAACTGT
CGCGCTCACAACAAAGCTAATAAAGAAATGGGCGGTAAGAAAGCGGTATT
GTTCGTACCTTGGGTGGTAATTAAGGCGTTAAAAAGGGGGTCTTGAATAT
TCTATTCTATAGTTTTATGCTCCTGAACTCACGAAATGCGTATTCTTTGA
TTCTCAGCGATTTATGGTTTTAGAAAACTTTAAAAGTGTAAAAGCAGCTA
ATCTATAAAACAAAAAAATGAAGCGACTGCTTGTGTTGAAATGTTCGTCA
AATTATACGTGGCTTACTTCATCAGCATGTAGCTCGACAAAAGATGATGT
CCTTTTACAAAAAAATTTGACCTTGTATAATCAATTATCATAAAAATCCT
TTTTTAATTGAAATCGCCTGTATACAAATGATTTTATGTTTCATGTTTTT
CGAAGTAAGCTGTTTATATTTTCTTGTTGTTCTCACAGGAGAAAACCTTT
TAACTCGTTGTTATGATTTTGACAGGACTGAAAGCGAGGCTGGTTCAAAC
TATACAATATAAATCAGAAGATAACAATAAAATAAAAGAAGTGGAGGTTA
TTCTAAAAGCTATCGGTGGAAACCGCATTCAGAGGAATCACACTAAAGTA
TGGGACAACCAGTTGCTATGGGTACCTTCAATACCACCTACAAACAAAGA
TGGTGATCCTAATGATATCATCAAAGTTTTATACCATGTACAGGTGGGTA
GATCGCTTTTCATTGTTAGCTCTGGTTTATACGATCCATTTTTTCCCAGT
CTATTCTAAGATCACGTTCACAGGCTACGTTCCGTTTCTCTCCGAAACGA
AACGGTTCCGAAACATTGTGTGAACGTCAAAATTGGAAACGTCAAAAAAG
AAGACGTTACAAAGACATTACAAAATTTCAAAAATGTGGAAAAACAGCCA
AATTTCAACCAAAAACGACATCACCTGGCAAGATCCTGATCCCTGATTAA
GATGCGAGTGACAACAATCGCTGTACCGAACATAAATGTATAAAAGATGA
TGACAAAATGAGAATTCAATGTCATAAATGCCAACGAACGCTACATGCCT
GCACAGGACTACCACCTTACCAGTTAAATATGTTTTTAAATAAAGGTTAC
CGAAAATACGTGTGTATAACTTGTTGCTCTCCAGCAAAAAACCTCGGTAG
AAAAGTTCATAATCAAGCGGAAAGAATTAAAAGCTGCACGCACAGCTACT
ATAAAGAAATTGAAGCGTGCGAAAGCATAATAAAAGTCAAAAGTGAGAGC
GAAAAAAGACTAAACACAATGGTCAATGATCTACAGGCAAAATGTCAGGA
ATACATCAAGGATAAAAATCAAATTACCAATCTAATACAGGGCCAGTTTT
CCACGCTAGAAACAAAACTAGCAGCCAAAATAGAAGAGACGTTGAATAAC
AAGACTCCAAAAATTCAAACCACAACAGGCACGAAAGAAAAGTTTTGCTG
AAGCGACTAAAAACAATGATCGATTAAGCGTAAATAGCATGAAACAGCTA
CTACGAAGGGAGAAAATAGAAGAACAAATTGAAGACCAAAGAAAGCTATC
GACAGAAGCAAATATCATTATCCATGGGGTAAATGAAAATAAAAGTAAAG
AAGATATCGATTTCGTTACTGAGCTTCTGAATGACGTTAATTTAAAGACT
CAACCAACCTACGTCTCTCGTGTTGGAAGAGAATCTAAAGTTATGCGCCC
AATCAAAGTTGCATTCAAAGACAGTCATAACAAATACAGATTCATGAAGA
AGTTGACTGAATTGAAACAACACGAGAAGTACGCGAAATTAAGTATCACC
GACGACTTGACATAAATGGAGAGGGAACAAATCAAAGAGTGGAAAAAGAC
AGCAGACGAGATGAATAAAGCCAGATCGAACGATGGTTTTAAATGGAGGG
TACGAGGAAGCCCTCGTGAAAAATTATGTTTTAAAAAGATTTTTTGTACA
AAAATGGTTTAGAGGCCCTTGTGCCTGAAATGTAATTCATTATAATAATG
TTTCATAGAGGTCAATAGACCTGCGAAATATATTGCTATATAATAATAAT
ATAAAGCAAAACAGATCGAAAAGGTTTCGCTCCACTATTTTCATCGGAAC
GGAACTACTCCGTTTTCTTGCTCCGAAACGTTCCGAAATGAGTATGAACA
CTTCCTATCCGTAACAAATACCACACCGGAGCGATACGAAACCGTAACGT
CTAAACATGGTTGGCTGTTTAAAGTCGATACATTGCCTTCTGTTAAGGCA
AATACAATGGCTTCTTTCAATATTTCCAAGTAATGATTTTAACTTCCAAT
ATTCTACGAATTGTTGCCTTCTCTTACAATTAGAATAGGCAAAGTAGGAA
GTCTAAAGTATAGAGCTTAGTCGTCTTGTTCACAAACTACCTATTATATC
AATTTTTGCTGTCGTTGAGACCGGCCGGGGATGTGCACACGAAAGGCCGG
CTATCATTCCTCCCGATGGGAAATTGGCCCGTTGCTTTAGCGATATAGCG
TTGGCGGCCGGTCAATCTTCCATTGGAACATCAAATAAAGTCAAATACTT
TTTGATATCAACACATACACACCGGAAAATCCTTTTTCTGTTTTTGATTC
AGATCTCGATGGAGATACCGAACGACGCCGACTTGACGTTGAAATTACCC
GTCACCATCGGTACCATTCCATGGAAAGATAACAAAACTTCACAAATACA
ACAACAACAGCAAGAAAAAGGTTCGTATCTCCCCTATTTCTATTTGGTTG
AGTTGCAGGAGGCTTTGAGGCCTATTTTCGCAACTATAGACGCTTTCAAT
GAGCGCCCCGTCAGCACCTTGGACTGACTACCCAATTCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGACTGAC
TACCCAATTCCCCTCACATGGCATGGGTTGACCCGGGCGAAGGTTCATTC
ACTTGCCAAGTGAACCGCTGCGAGTGGGAATCGAACCTCAGTCTGCCTCA
GTCGCCTGTGCAGCAACCAAGGTCAATGACCACTATACCACAGCGCCTTA
AAAAAACAACATAGTTAACATAATTGACACTGTTCTTACTTATCAACTAT
CTTGACCTCATAAACTTGAATCCCTTCCTTGTTGAATGAATTCCTCATGT
ATCATGTTAAACTCATTTAAGATTCATGATTTGGCTTTCTCCCATTGGAA
CAGTAACTAACTATCCACGGGCTGATGATACATACAGTTGATATTTTACG
TGGATAGCCCAGTAATCTAAGACTTTTCCAATTCAGACCGATCATGGAGG
TTCATGAAGTGCACAGACGGTAGTGATTGTTTTAACCGATCCAGTAAACG
ATACCAATTCCCAATGCAACCTTTCATCCCGTCAACCATATTCGTTCAAG
ATTATCACCCTTTCTTACAAAAACAAGTCAACAACAATCAAACTTTACAA
CGCTCTAAATGGGTAAGCAAAATATAAGCCCTTCGGCACAATTCAAGTTA
TCAGTTCTTCAGTTTTTAAGCATTTTTTTGCCTTATTTCAATTTTTGCAA
TTAGCGTTCTCTCGAGTCTCTAATAAACAAGAAATTAGTCTAATACTTGT
TGAAATTTGATACTTTTGTAAGGAATAGATATACATGTGGGAAAACCTAA
CAAAAAGTAATGAGCACTTAATCTTAGTCCTTAAAAAATCCATAACTCGC
ATGCACGGGGAACATAAATTTGTTCGAGTTGAGGAAATTTCGAGTTATGG
AGTAATGTTTATAAGGTATTTTTAACAGAAGGGAAAAACTTGTTCGAGTT
AGGGAGAGGTTCGAGTTATGGAGGTTCGAATTTAAGAGACTAAATTGTCC
AAGGTATTCCAAAAATGAAACTACCTCGCCGCTATGATGATTTTTCAGTA
ATTTTCCCTTTGATCGGATTCCACAGTTGTTGGTAATCTAAATTATTGTT
GCGGAAGCCATTGTCATCGTAGAAATCAGCAAGATCGGGTTAAGCAAATG
GCTTTTCGTCGCCAGGTTTTCGGTCTAACTCGAACTTAATCTTTGTTTGT
CCTGTTTTGTAGAATCGACAGTTAATATACATGAAATTCATTGTGCTTTC
CTTCGTTCTTACCTCAGAAAAACGATGAAAGGCAACCTTTACTACAACCA
AGACACGCGTGAGATGAGTGGACTTTTTTGTTTTGACGATAGCTTTCGAC
AGATTGGTGAAAGTGGAAAGATAGTTGAGAGTTGAAACCTCTTTTTTATT
GGGATTGTTAATATAAATCTTTGAATTTTTTTTCACAAATTTTTGACGAC
TAATTTTAAGTTTATAAAGTGTGTTTGATAATCAATGATATCGTGAATTT
TTTCTGATTGTTGATATTCATGACTTATTCTTTTACATGGAAACACCCAA
AAACATCGAGCCTGTGCAAACACCCGCTGTTCTTTGGGTGTTTTCGTATA
AGATAATAATTATTCATTAATATCATGAATTTCAGAGTATAATATACAGT
GCTGTAACAATGTTTTTGTGTATTTTACAAAGGTTTTTATTAGTAACGTT
CACTCATAGCTAATCATTTATTAAACCTGTTGATTTTGGGTCAAAAAGAT
TCCTCTACATAGCCCAAACCGAGTGCAGGTGCCAAATTTTCAGGTGCAAG
TGTAGGCGGTTTTTTAACCCCAAGTGCAAAGTTCCGCTATTTTCTCCTCA
AGTGCAGCTAATTTTAGCAATCTTTTGCCTTTTTGGGCCAATTTCCGAGG
TATAGGTGCACCTTGTCCGGGCCATAATTCATCAGGTGCGCTCTTTCAGT
GCGTGAAGTGCAGCCTTGCACTACTGTGCAAACTGGCCAGAGGGTTCTAG
CTAATGTAATGCTAATGTTATGCTACAATATGAATTTTTAGAATGAATTG
TCGATGTTTGATTGACCCTATAATAATTTATTGTGAAACGTCTATATGTA
ATTTGTATATTTTCGATGGAGCTCATTCTTCGAGCTTTCATGACAGTTAA
ATTTGATTAGTAAGTTCTTAACTCTATCAATACCGAGTTTATGTATCGAA
GGATATCGAGGGCGACGGTAAGTGAAATCGATACAAAACAAAGTCGATAG
TTGATTGATGTACGGCTCTATATCGCCTTTGCTCACCTAAACAGACGACG
GTATTTTGGTGTTTTTACCGTCGTCGAGCAAAGTGGATGGTGATTTTGGA
GACATCTCAACTTTGCTTTACACCGCCCCCTCGATTTACCTCGAATACAT
AAACTCGCTAATACTAGGATTTCAGGGGTGGTTCAGGCTAGGGAGGGGGC
TTTTTCTGTACCACCCCTTAACCTTAAATGTACGTGTGTCATATAGCTTA
TATAAAAGTCTTCAAATGTAAATCTTACCAACATTTTTATGAAACAATTC
TAAAAAAAGTAAGGCTGAAAGTCTGGGCAAATTTAATATACAAAAAAAGT
GAGAAATCATAAAAAATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032587XLOC_032587Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051432-exon-scaffold_201-1575043694:592057..592389TCONS_00051432-exon-scaffold_201-1575043694:592057..592389Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1575043694:589770..589978TCONS_00051432-exon-scaffold_201-1575043694:589770..589978Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1575043694:589006..589165TCONS_00051432-exon-scaffold_201-1575043694:589006..589165Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1575043694:588347..588564TCONS_00051432-exon-scaffold_201-1575043694:588347..588564Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1575043694:586320..586437TCONS_00051432-exon-scaffold_201-1575043694:586320..586437Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1575043694:585528..585703TCONS_00051432-exon-scaffold_201-1575043694:585528..585703Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1575043694:583520..584872TCONS_00051432-exon-scaffold_201-1575043694:583520..584872Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1510915933:592057..592389TCONS_00051432-exon-scaffold_201-1510915933:592057..592389Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1510915933:589770..589978TCONS_00051432-exon-scaffold_201-1510915933:589770..589978Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1510915933:589006..589165TCONS_00051432-exon-scaffold_201-1510915933:589006..589165Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1510915933:588347..588564TCONS_00051432-exon-scaffold_201-1510915933:588347..588564Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1510915933:586320..586437TCONS_00051432-exon-scaffold_201-1510915933:586320..586437Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1510915933:585528..585703TCONS_00051432-exon-scaffold_201-1510915933:585528..585703Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1510915933:583520..584872TCONS_00051432-exon-scaffold_201-1510915933:583520..584872Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1491911889:592057..592389TCONS_00051432-exon-scaffold_201-1491911889:592057..592389Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1491911889:589770..589978TCONS_00051432-exon-scaffold_201-1491911889:589770..589978Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1491911889:589006..589165TCONS_00051432-exon-scaffold_201-1491911889:589006..589165Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1491911889:588347..588564TCONS_00051432-exon-scaffold_201-1491911889:588347..588564Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1491911889:586320..586437TCONS_00051432-exon-scaffold_201-1491911889:586320..586437Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1491911889:585528..585703TCONS_00051432-exon-scaffold_201-1491911889:585528..585703Clytia hemisphaericaexon
TCONS_00051432-exon-scaffold_201-1491911889:583520..584872TCONS_00051432-exon-scaffold_201-1491911889:583520..584872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:583520..592389 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.58807e-08	0	4.20615	2.18186	0.00214646	1.27651	1.19195e-08	2.94691e-06	6.02091	5.46599	0.153241	7.63129	2.95726	4.37061	1.19902	1.82355	1.88271	3.63182	1.62194	4.24896	0.90425	1.68578	3.13506	3.78361	0.00895695	3.14913e-07	2.2432	2.34221	1.64491	0.392795
Blast
[Close]
BLAST of TCONS_00051432 vs. Swiss-Prot (Human)
Match: ARRD3 (Arrestin domain-containing protein 3 OS=Homo sapiens GN=ARRDC3 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.892e-30
Identity = 90/299 (30.10%), Postives = 147/299 (49.16%), Query Frame = 3 
Query:  147 FFTGECIEGFIDVDVNTSRILEDIALLFRGETLACWQDNEEAG------QQNTMRVHRSHWKDEMIISDLS--------HGTESGNGIISFPFKMYLPDGKLPSSFESKFGAVRYWLKVSLSPG---TVNCQYPFTVLEKINVNDKKYQKSVSSFTEKMIC-WMCFRYGGISLTANIDRSAYCPGEAIAVNCRAHNKANKEMGGLKARLVQTIQYKSEDNNKIKEVEVILKAIGGNRIQRNHTKVWDNQLLWVPSIPPTNKDGDPNDIIKVLYHVQISMEIPNDADLTLKLPVTIGTIP 989
            + +G+ + G ++++V     ++ + +  RG     W ++  AG      Q  T  V   + KD +I  +          H   SG    +F F+  LP   L +SFE + G+VRYW+K  L       V  +  FTV E I++N        +   EK +C W C   G ISL+A I+R  Y PGE+I +     N +++ M   KA + QT  + ++   K+KEV+ ++  + G  +    T+ W+ +LL +P + P+  D     II+V Y + + ++IP   DL L LP+ IGTIP
Sbjct:   24 YSSGDTVSGRVNLEVTGEIRVKSLKIHARGHAKVRWTESRNAGSNTAYTQNYTEEVEYFNHKDILIGHERDDDNSEEGFHTIHSGRHEYAFSFE--LPQTPLATSFEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDINTPSLLSPQAGTKEKTLCCWFCTS-GPISLSAKIERKGYTPGESIQIFAEIENCSSR-MVVPKAAIYQTQAFYAK--GKMKEVKQLVANLRGESLSSGKTETWNGKLLKIPPVSPSILDC---SIIRVEYSLMVYVDIPGAMDLFLNLPLVIGTIP 313
The following BLAST results are available for this feature:
BLAST of TCONS_00051432 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ARRD31.892e-3030.10Arrestin domain-containing protein 3 OS=Homo sapie... [more]
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