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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051440 ID=TCONS_00051440|Name=TCONS_00051440|organism=Clytia hemisphaerica|type=transcript|length=1464bp
ATTGAACTTAGCAATCTTTGCACTTTTGTTATCGATAAATAATATTTAAT
TTAAATAACTTTATAGTAtaggtatataaaccaaaaatcgaggtataaaa
aataaaacattaacaGAATAATAATCTAGgtagaaaaatatataatatct
TTTAAAATAGGTTCATTTTCAATTTCCCTTGCATATAAAACTAACAACag
tgcaaaaaaattaaattacaaaaaaataaacaaaaaaataactaaaataa
tgaaaatttaaataaattaagataaaaaaattcaagatttaaTAACAGGT
GGCAAAAAATTGAGCCTCTNGAAAACTaactaaaaataatgaaaatttaa
ataaattaagataaaaaaattcaagatttaaTAACAGGTGGCAAAAAATT
GAGCCTCTGTCCCTAAAATGCATGCCACGTGGAGTGACCTGCCTGTTTGc
ataaaatttgaccaaaaaaaattaaagtgaaaGAAAGTTAGAGGGGGGTC
CTATTTTCGGTATTTTCAAGCAATGATCACGTCATCAGGTTGGTCTCAAA
CATTGACTGCTTTTACAGTGTCTGTAATCTCTGTagaaatgtattttttt
cttgGAAACGTGCGCGAAAACAAACCCAAAAGAAACCAGGGAATGTGGAT
GTTAGACCAACTAATAATACCAGAGTATTCCTCAAGGATTGACCCGTCGT
AAATATCCCTCGTGTAATTCTGGCACCCTTTTTAGAGATATGATTAAAAG
GAAGGTTGGAAACCAAAGTCCAAAGTCGAATAAGCCTCAGATTGAGCATT
GCATTCGGCCTTGGGTTTAGCCTTGGATTTAGCGTCGTATTCAACCtcac
attcgattttttttgtatttttcatgcCGAAGGTGATGATACTTGAAATT
GCTATTCCTATCAAACCTCGTCCCTCAGCtacaaattggcccaaaaatgT
CAATGACAACAGTGTACGCTCTGTGGGAATGAATTTCAGTTTGGTCCAGA
TTGACAAGGGAACACATCCACAACCTTACAAATGCCAGCCACACATTCAA
CCCTCGGTACCACGGTCCATCAGAATCGAGAACTTCTACTTCTAATACCA
TACGAACACAGTGTACGCTATACAGGAATGAATTTCAATTTGGTCCAGAT
TGACAAGCGAACATATCCACAACCTTGCAGGTGCCAATCATACCTTTAAC
CCTCGGTACCACGGTCTATCAGATTCGAAGACTTTTACTTCTAATCACAT
ACGAACTTTCTCTCATACGGTTGTTTCcagttttttcttttgaagattct
TCTTAAAAGTATTACTGTTCAAACGTAATGGTTTTGGCTCGACGTAAAAA
TTGATTTCTTCTGGCAAAGGAATCTCAAACTCAATATGGGTCAATAGAAT
ATCCAGCCACTTTTCACAACAAACAAAAGATGGcctattaaaatcaaaaa
gtatatAAGTACCN Run BLAST on NCBI transcript from alignment at scaffold_201:101387..102850 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051440 ID=TCONS_00051440|Name=TCONS_00051440|organism=Clytia hemisphaerica|type=transcript|length=1464bp|location=Sequence derived from alignment at scaffold_201:101387..102850 (Clytia hemisphaerica)
NGGTACTTatatactttttgattttaataggCCATCTTTTGTTTGTTGTG
AAAAGTGGCTGGATATTCTATTGACCCATATTGAGTTTGAGATTCCTTTG
CCAGAAGAAATCAATTTTTACGTCGAGCCAAAACCATTACGTTTGAACAG
TAATACTTTTAAGAagaatcttcaaaagaaaaaactgGAAACAACCGTAT
GAGAGAAAGTTCGTATGTGATTAGAAGTAAAAGTCTTCGAATCTGATAGA
CCGTGGTACCGAGGGTTAAAGGTATGATTGGCACCTGCAAGGTTGTGGAT
ATGTTCGCTTGTCAATCTGGACCAAATTGAAATTCATTCCTGTATAGCGT
ACACTGTGTTCGTATGGTATTAGAAGTAGAAGTTCTCGATTCTGATGGAC
CGTGGTACCGAGGGTTGAATGTGTGGCTGGCATTTGTAAGGTTGTGGATG
TGTTCCCTTGTCAATCTGGACCAAACTGAAATTCATTCCCACAGAGCGTA
CACTGTTGTCATTGAcatttttgggccaatttgtaGCTGAGGGACGAGGT
TTGATAGGAATAGCAATTTCAAGTATCATCACCTTCGgcatgaaaaatac
aaaaaaaatcgaatgtgaGGTTGAATACGACGCTAAATCCAAGGCTAAAC
CCAAGGCCGAATGCAATGCTCAATCTGAGGCTTATTCGACTTTGGACTTT
GGTTTCCAACCTTCCTTTTAATCATATCTCTAAAAAGGGTGCCAGAATTA
CACGAGGGATATTTACGACGGGTCAATCCTTGAGGAATACTCTGGTATTA
TTAGTTGGTCTAACATCCACATTCCCTGGTTTCTTTTGGGTTTGTTTTCG
CGCACGTTTCcaagaaaaaaatacatttctACAGAGATTACAGACACTGT
AAAAGCAGTCAATGTTTGAGACCAACCTGATGACGTGATCATTGCTTGAA
AATACCGAAAATAGGACCCCCCTCTAACTTTCtttcactttaattttttt
tggtcaaattttatgCAAACAGGCAGGTCACTCCACGTGGCATGCATTTT
AGGGACAGAGGCTCAATTTTTTGCCACCTGTTAttaaatcttgaattttt
ttatcttaatttatttaaattttcattatttttagttAGTTTTCNAGAGG
CTCAATTTTTTGCCACCTGTTAttaaatcttgaatttttttatcttaatt
tatttaaattttcattattttagttatttttttgtttatttttttgtaat
ttaatttttttgcactGTTGTTAGTTTTATATGCAAGGGAAATTGAAAAT
GAACCTATTTTAAAagatattatatatttttctacCTAGATTATTATTCt
gttaatgttttattttttatacctcgatttttggtttatatacctaTACT
ATAAAGTTATTTAAATTAAATATTATTTATCGATAACAAAAGTGCAAAGA
TTGCTAAGTTCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051440-exon-scaffold_201-1491911889:101387..102850 | TCONS_00051440-exon-scaffold_201-1491911889:101387..102850 | Clytia hemisphaerica | exon |
| TCONS_00051440-exon-scaffold_201-1510915933:101387..102850 | TCONS_00051440-exon-scaffold_201-1510915933:101387..102850 | Clytia hemisphaerica | exon |
| TCONS_00051440-exon-scaffold_201-1575043694:101387..102850 | TCONS_00051440-exon-scaffold_201-1575043694:101387..102850 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:101387..102850 . |
Blast
The following BLAST results are available for this feature:
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