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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051456 ID=TCONS_00051456|Name=TCONS_00051456|organism=Clytia hemisphaerica|type=transcript|length=1101bp
TTATTTCTCTGTGCATTGTGATTCGtcttattttcttcatttttcatcaa
atagtCAGAGAGTAAACGAATAATccattcacaaaaaaataattcacaaa
tATTCAAAGACATACATACAAACACCACCaaatattataaaataaaaaaa
taattcaattatACATTCAAATTACCACTTGGGGAAGGGATAACTGGAGC
TACCTCTAACTTCGGCAAAAATTGATAACCGGGAATAACCGGGATCGACT
CTATTACTCTGATGTTATGGAAGGAAACGTTTGAATTTGTAGAGGCGACA
CCTTAAGAGAGGCGAAAGCTACGTaatttaacaaaacatgaaacCTCATA
GATTTCGGTAACATGTTCCGCATTCTGCATTGTACCCACCACTTCTGGAG
AAGGTTCATGCATTCGATTAGAGATTAGCATCGAGTATAAAGTGGGTTTG
CAAAGGAGGGtttatacaaatttaaaaaacatttgaatGGCAGAGAATTC
TATCTTCTATGGAGTATATACGAGTAAAAGTTTGCGTGCAGAGTAACTTG
CAttaattaaaatattaaaaacagcGGCAGGTGGCAGTGGTGGGTGGTGG
GCGGTGGGCGGTTATAGGAAATTCTTGACGTGTTGGACATCAAAATTGTG
ACATGATAATTGACATTTACAGTCCATTTCACAGACAGGGTGTACATATG
GTAACGCCACATCCCGCCATACGTGATTGAGGGCGGAAACCAGTTCATCC
ATCATTTCTTCGGTATGGAAGGGCGTTGGTGCGATGCGTAACTTCTCGCG
GCCGCGCGGAACAGTAGGGTAGTTGATGGATTGAATGTAGATACCGTATT
CTTGTTGAAGACGTCGCGAAATTTCCAAACATTTCTCCGcatcaaaacac
ttgaaagaaaattgatgGAAATAATTATAACGAAGCCTTTAAAATTGAAT
AGTCATCCTTTGAAAGATTGATCTAGAACCTTTAGCAAGAAAAAAGCCTT
TCTAGTCGTCCCTAAAATCGTAATTCAAAGTGGATGGGTTTGTTACGTGG
ATGCATAGCCATATAGGTTGTCGAACAAGGAGGTTAAACACTAGAATAGG
C Run BLAST on NCBI transcript from alignment at scaffold_201:374610..375710 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051456 ID=TCONS_00051456|Name=TCONS_00051456|organism=Clytia hemisphaerica|type=transcript|length=1101bp|location=Sequence derived from alignment at scaffold_201:374610..375710 (Clytia hemisphaerica)
GCCTATTCTAGTGTTTAACCTCCTTGTTCGACAACCTATATGGCTATGCA
TCCACGTAACAAACCCATCCACTTTGAATTACGATTTTAGGGACGACTAG
AAAGGCTTTTTTCTTGCTAAAGGTTCTAGATCAATCTTTCAAAGGATGAC
TATTCAATTTTAAAGGCTTCGTTATAATTATTTCcatcaattttctttca
agtgttttgatgCGGAGAAATGTTTGGAAATTTCGCGACGTCTTCAACAA
GAATACGGTATCTACATTCAATCCATCAACTACCCTACTGTTCCGCGCGG
CCGCGAGAAGTTACGCATCGCACCAACGCCCTTCCATACCGAAGAAATGA
TGGATGAACTGGTTTCCGCCCTCAATCACGTATGGCGGGATGTGGCGTTA
CCATATGTACACCCTGTCTGTGAAATGGACTGTAAATGTCAATTATCATG
TCACAATTTTGATGTCCAACACGTCAAGAATTTCCTATAACCGCCCACCG
CCCACCACCCACCACTGCCACCTGCCgctgtttttaatattttaattaaT
GCAAGTTACTCTGCACGCAAACTTTTACTCGTATATACTCCATAGAAGAT
AGAATTCTCTGCCattcaaatgttttttaaatttgtataaaCCCTCCTTT
GCAAACCCACTTTATACTCGATGCTAATCTCTAATCGAATGCATGAACCT
TCTCCAGAAGTGGTGGGTACAATGCAGAATGCGGAACATGTTACCGAAAT
CTATGAGgtttcatgttttgttaaattACGTAGCTTTCGCCTCTCTTAAG
GTGTCGCCTCTACAAATTCAAACGTTTCCTTCCATAACATCAGAGTAATA
GAGTCGATCCCGGTTATTCCCGGTTATCAATTTTTGCCGAAGTTAGAGGT
AGCTCCAGTTATCCCTTCCCCAAGTGGTAATTTGAATGTataattgaatt
atttttttattttataatatttGGTGGTGTTTGTATGTATGTCTTTGAAT
atttgtgaattatttttttgtgaatggATTATTCGTTTACTCTCTGacta
tttgatgaaaaatgaagaaaataagaCGAATCACAATGCACAGAGAAATA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051456-exon-scaffold_201-1491911889:374610..375710 | TCONS_00051456-exon-scaffold_201-1491911889:374610..375710 | Clytia hemisphaerica | exon |
| TCONS_00051456-exon-scaffold_201-1510915933:374610..375710 | TCONS_00051456-exon-scaffold_201-1510915933:374610..375710 | Clytia hemisphaerica | exon |
| TCONS_00051456-exon-scaffold_201-1575043694:374610..375710 | TCONS_00051456-exon-scaffold_201-1575043694:374610..375710 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:374610..375710 . |
Blast
The following BLAST results are available for this feature:
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