TCONS_00051481 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051481
Unique NameTCONS_00051481
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length986

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051481 ID=TCONS_00051481|Name=TCONS_00051481|organism=Clytia hemisphaerica|type=transcript|length=986bp
ACAGCCAAGAGTAAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGT
ATTGGTGCTTGATAAGGTCTTACAATCGTTGCCGTGGGAAAGTATTCCAA
TATTACGTCATCAACCCATCAGTCGTATGCCGTCAATTTTGCTGACCAGA
ACTCATTGTGATTCGTATAAGGGCCTTCTAGAGGATGGACTGAACACGGA
GAACAGTTATTACATTTTGAATCCACGAAATGATTTGAAACGAACGGAAA
CAATGTTCCAACAATATTTCATCGATGTAAAATGGCAAGGCATTGTGGGT
CGTGCGCCGACAAGTGACGAATTCTCCAAAGCACTCACTCAACACGATTT
ATTTGTTTATTGTGGTCACGGGAGCGGACAAGAATATCTTGGTTGGGatg
caatgcaacgacttcattgCAAATCCGTCGCCCTGTTGATGGGATGCAGC
AGTGGAAAACTGGTGGCGAAAGGCTCATTAGAAGCTCAAGGAATGGTGCA
ATACTACTTGCTGTCTGGAAGTCCTGCGATCGTTGCTAATTTATGGGACG
TCACGGACAAAGATATTGACCTCTTTCTTCAACAATTGCTCGAGCTTTGG
TTAACCGAGACAAAAGGAGGAGACCTTGCTTCTTGTGTAAGCGAGGCAAG
AGAAGCATGCAAATTGGAATATTTGATTGGTGCAGCTCCCGTCGTGTATG
GGTTACCACTTGTTGCTCGATAAAATTTGGTTGTATTCATTCTAAGTAGA
AGAACCTGCTGAAAGCTTTTCCGAATTTTAGTGTTCAAGGAAAAATATGA
AGCAAGGCGAATTGAAATTCATTATTCTGCCCTAAATGCGAGTTTtcatc
atagatttataaagcccgaaggactagatgtcgtactttaagctcttcca
agtgAAAAAaggtgaatatcgcaaaaaatattgctgctattgttttcgaa
aacccgcgaagcttctgattggtcaagtgctgaaat
Run BLAST on NCBI

protein sequence of TCONS_00051481-protein

>TCONS_00051481-protein ID=TCONS_00051481-protein|Name=TCONS_00051481-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
TAKSKAKLTVKKRKHIVLVLDKVLQSLPWESIPILRHQPISRMPSILLTR
THCDSYKGLLEDGLNTENSYYILNPRNDLKRTETMFQQYFIDVKWQGIVG
RAPTSDEFSKALTQHDLFVYCGHGSGQEYLGWDAMQRLHCKSVALLMGCS
SGKLVAKGSLEAQGMVQYYLLSGSPAIVANLWDVTDKDIDLFLQQLLELW
LTETKGGDLASCVSEAREACKLEYLIGAAPVVYGLPLVAR
Run BLAST on NCBI

transcript from alignment at scaffold_202:41781..45893+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051481 ID=TCONS_00051481|Name=TCONS_00051481|organism=Clytia hemisphaerica|type=transcript|length=4113bp|location=Sequence derived from alignment at scaffold_202:41781..45893+ (Clytia hemisphaerica)
ACAGCCAAGAGTAAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGT
ATTGGTGCTTGATAAGGTATGTTTTTTGTACACATTAGATGTGTTCTTTA
TAACTAGGCAGGTGAGGTCACAAAAATATACCAAGATAAAGATAAAAATG
TCATATTTATTCAAAGCAATTACCATAAGTTCATTCACAAACTTTGCTAT
GCGACCCCAGCTACCTGACtattagttttcatttatttacattTATGATT
CGTTTTCCAGGTCTTACAATCGTTGCCGTGGGAAAGTATTCCAATATTAC
GTCATCAACCCATCAGTCGTATGCCGTCAATTTTGCTGACCAGAACTCAT
TGTGATTCGTATAAGGTAAAGAAGTGTTTTCTGTTGAATAAACCGCAGAA
ACTCCATTGACGCTTTGTATTTATACATAAAGAACACTGGTGAGATAGAT
GTACGTGTTTCCACTTCTTGgaatttcttcattatttttgaatattCCAT
TACACCTTCAGAATTTAGCACTGAGCATTGAGCAATGCTTATTTAGTTGG
GACAAAATGAAGGAGTAAAATGACAATAAGATAAGAAATCTCGTGATTTT
ATCAGTGGTCATTTCAAATTCTATTAATTGCGGCTCGTGATCTGTAGGGC
CTAGCAGATATGCAACTATTAGGTAATCCATCCTGACAACATAAAAAAAg
tggtttttctttttcttgacaGGGCCTTCTAGAGGATGGACTGAACACGG
AGAACAGTTATTACATTTTGAATCCACGAAATGATTTGAAACGAACGGAA
ACAATGTTCCAACAATATTTCATCGAGTAAGTGGATATTATCATTGAGTC
CATTCAGTACTACAgtaaagtctccataactcgaacaaccACAGgggaca
caaatttgttcgagataAGGAAATATCGAGTTATTGAGTTAGGTTTATAA
GGgtttgttaactgaagggaccataaaacttgttcgagttaagaagacgt
tcgagttatagagactccactgtatctGCAGTATTGTTTGTCGAAAAGTT
TAATACGAATCAAACTTATATCCAGAGTTACCTCGTTTGCCATACAATGA
TGTCTTTATTCTAATTCTTACTTTATTTCTTTCTTGTCACTTCAGTGTAA
AATGGCAAGGCATTGTGGGTCGTGCGCCGACAAGTGACGAATTCTCCAAA
GCACTCACTCAACACGATTTATTTGTGTAAGTTGTCAGTTTTGGACAGCA
TCAAAACACGCACacacaaattttgccattttctgcTCACCATCTTTCTG
CTCAACACCTGTCCTCAACTGAAGAAGTCACATGTCTTCCTTGCCACGCG
GACACAAAAATCTATTTAACaatgattttatattttccttGAATCTCCAG
TTCAAtagataaagaattaaaaaagtcACTAAAGAAACAGTTTAAATCAC
AAATAACCAAGATATACTGTTAAGTCCAAGATATGGAAAGGTTtcctgta
atttttttttgctacatCACCTTCTTTCCCAAAACGTGGACGTCCTTTAT
AGATATCTCCCTCCAGAATCTTGTAAAATAGTTCATGTTCAATAATTTGT
TGTCGGTTTACTCACAATTTTTCAGGAACAGGACAGgggtttcttaggaa
aatatCACAATTTTGCCTCTTCTAGTCTAGTGTGGAGTCgtttaggctgc
acgcatcccctctgatatgttttgatataggggatgcgtatcgtgtataa
aattcccgtccgagagttacctccGTTTCTCTGgttttgagttttagaaa
cttgatttgcttgattagtaagttctatatgaaatctgaaaattttatta
aatttgattggctaGAGGTTtatacaatcattggatttctaatcgctttt
aagaaaattgaaacaggttgCCCGaaatttggggtaactctcggacggta
TCTGgccaatttcattaaaattgggtcaaaaatcattttcaacaaatttt
aaaccttttgaGTGCACTTGTCTCATCTTTGGTCATTTCGAagtttactc
ttaggttccaaataaacgccccccccccactttttaatttttcgaaaatt
ttacacccctcggaccttattaggaccccccccccgtttataaATTTTTA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNggggccccccccccccggtttaGAATccat
gtaatacagtaatattaGTGTTATTTAATAATACAATAATCGTAACGGGA
TAATATCTGTTTGCATAAACTAAAATTTGTCCCctccattattttttgct
tgttttgctTTTCTGAAATAGTCTTCTAGTATGCTAGGATACTTCTAGTT
CAAGGAACACCAtcgtttttgttattttttaccAGTTATTGTGGTCACGG
GAGCGGACAAGAATATCTTGGTTGGGatgcaatgcaacgacttcattgCA
AATCCGTCGCCCTGTTGATGGGATGCAGCAGTGGAAAACTGGTGGTGAGT
TAATTCGTGCTCTGTGCTGTGGTgtgaattttttaaccaatgTAAATGAA
ATAAGGGAGCTACTCTAAACGGATATGTGAAATTTTGTGAGTTCATTTTC
GAGAATCAGCGCTTTGAAATACAGGGTGCGTTACAAAACAGTTTGTATTT
TCCAAGTGAATTTTCTTTAGGTCTAAAAATGAAGGAACCATTAACGCAGT
TTGTTCCTAATGATTTCCTCTTTCAGGCGAAAGGCTCATTAGAAGCTCAA
GGAATGGTGCAATACTACTTGCTGTCTGGAAGGTTAGTGACTGTCACTTT
GTCGTATGTTGGAAGGGTATATTGCAAATACTCTTTTTAATCTTCTACCA
ATATCTAAACAATTTCAAACCCATATCGTGTACGTACGATCTGTTAGTTG
AAAACCTTTAATAAATCTTTGTGGGCTACAACAGGCagaaatttgtactt
tttacGTGCCGaatatgaaaaattaactaTGTTTAAAGAACATTTCTTAA
aggcagatttttttgaaaagtattttttcgAGAGAAAAATGAATTGATCA
TTTCTGACCTTTTTTCATAATTTGGTTCGATAAACTTATTCAGCCTGTCC
TCAATTTTCCAGAGAAACTTTGTAACTCGACTGTATTCATTTTTTTAGTC
CTGCGATCGTTGCTAATTTATGGGACGTCACGGACAAAGATATTGACCTC
TTTCTTCAACAATTGCTCGAGCTTTGGTTAACCGAGACAAAAGGAGGAGA
CCTTGCTTCTTGTGTAAGCGAGGCAAGAGAAGCATGCAAATTGGAATATT
TGATTGGTGCAGCTCCCGTCGTGTATGGGTTACCACTTGTTGCTCGATAA
AATTTGGTTGTATTCATTCTAAGTAGAAGAACCTGCTGAAAGCTTTTCCG
AATTTTAGTGTTCAAGGAAAAATATGAAGCAAGGCGAATTGAAATTCATT
ATTCTGCCCTAAATGCGAGTTTtcatcatagatttataaagcccgaagga
ctagatgtcgtactttaagctcttccaagtgAAAAAaggtgaatatcgca
aaaaatattgctgctattgttttcgaaaacccgcgaagcttctgattggt
caagtgctgaaat

Coding sequence (CDS) from alignment at scaffold_202:41781..45893+

>TCONS_00051481 ID=TCONS_00051481|Name=TCONS_00051481|organism=Clytia hemisphaerica|type=CDS|length=5061bp|location=Sequence derived from alignment at scaffold_202:41781..45893+ (Clytia hemisphaerica)
ACAGCCAAGAGTAAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGT
ATTGGTGCTTGATAAGGTCTTACAATCGTTGCCGTGGGAAAGTATTCCAA
TATTACGTCATCAACCCATCAGTCGTATGCCGTCAATTTTGCTGACCAGA
ACTCATTGTGATTCGTATAAGGGCCTTCTAGAGGATGGACTGAACACGGA
GAACAGTTATTACATTTTGAATCCACGAAATGATTTGAAACGAACGGAAA
CAATGTTCCAACAATATTTCATCGATGTAAAATGGCAAGGCATTGTGGGT
CGTGCGCCGACAAGTGACGAATTCTCCAAAGCACTCACTCAACACGATTT
ATTTGTTTATTGTGGTCACGGGAGCGGACAAGAATATCTTGGTTGGGatg
caatgcaacgacttcattgCAAATCCGTCGCCCTGTTGATGGGATGCAGC
AGTGGAAAACTGGTGGCGAAAGGCTCATTAGAAGCTCAAGGAATGGTGCA
ATACTACTTGCTGTCTGGAAGTCCTGCGATCGTTGCTAATTTATGGGACG
TCACGGACAAAGATATTGACCTCTTTCTTCAACAATTGCTCGAGCTTTGG
TTAACCGAGACAAAAGGAGGAGACCTTGCTTCTTGTGTAAGCGAGGCAAG
AGAAGCATGCAAATTGGAATATTTGATTGGTGCAGCTCCCGTCGTGTATG
GGTTACCACTTGTTGCTCGATAAACAGCCAAGAGTAAGGCAAAATTGACA
GTCAAGAAGCGAAAACACATTGTATTGGTGCTTGATAAGGTCTTACAATC
GTTGCCGTGGGAAAGTATTCCAATATTACGTCATCAACCCATCAGTCGTA
TGCCGTCAATTTTGCTGACCAGAACTCATTGTGATTCGTATAAGGGCCTT
CTAGAGGATGGACTGAACACGGAGAACAGTTATTACATTTTGAATCCACG
AAATGATTTGAAACGAACGGAAACAATGTTCCAACAATATTTCATCGATG
TAAAATGGCAAGGCATTGTGGGTCGTGCGCCGACAAGTGACGAATTCTCC
AAAGCACTCACTCAACACGATTTATTTGTTTATTGTGGTCACGGGAGCGG
ACAAGAATATCTTGGTTGGGatgcaatgcaacgacttcattgCAAATCCG
TCGCCCTGTTGATGGGATGCAGCAGTGGAAAACTGGTGGCGAAAGGCTCA
TTAGAAGCTCAAGGAATGGTGCAATACTACTTGCTGTCTGGAAGTCCTGC
GATCGTTGCTAATTTATGGGACGTCACGGACAAAGATATTGACCTCTTTC
TTCAACAATTGCTCGAGCTTTGGTTAACCGAGACAAAAGGAGGAGACCTT
GCTTCTTGTGTAAGCGAGGCAAGAGAAGCATGCAAATTGGAATATTTGAT
TGGTGCAGCTCCCGTCGTGTATGGGTTACCACTTGTTGCTCGATAAACAG
CCAAGAGTAAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGTATTG
GTGCTTGATAAGGTCTTACAATCGTTGCCGTGGGAAAGTATTCCAATATT
ACGTCATCAACCCATCAGTCGTATGCCGTCAATTTTGCTGACCAGAACTC
ATTGTGATTCGTATAAGGGCCTTCTAGAGGATGGACTGAACACGGAGAAC
AGTTATTACATTTTGAATCCACGAAATGATTTGAAACGAACGGAAACAAT
GTTCCAACAATATTTCATCGATGTAAAATGGCAAGGCATTGTGGGTCGTG
CGCCGACAAGTGACGAATTCTCCAAAGCACTCACTCAACACGATTTATTT
GTTTATTGTGGTCACGGGAGCGGACAAGAATATCTTGGTTGGGatgcaat
gcaacgacttcattgCAAATCCGTCGCCCTGTTGATGGGATGCAGCAGTG
GAAAACTGGTGGCGAAAGGCTCATTAGAAGCTCAAGGAATGGTGCAATAC
TACTTGCTGTCTGGAAGTCCTGCGATCGTTGCTAATTTATGGGACGTCAC
GGACAAAGATATTGACCTCTTTCTTCAACAATTGCTCGAGCTTTGGTTAA
CCGAGACAAAAGGAGGAGACCTTGCTTCTTGTGTAAGCGAGGCAAGAGAA
GCATGCAAATTGGAATATTTGATTGGTGCAGCTCCCGTCGTGTATGGGTT
ACCACTTGTTGCTCGATAAACAGCCAAGAGTAAGGCAAAATTGACAGTCA
AGAAGCGAAAACACATTGTATTGGTGCTTGATAAGGTCTTACAATCGTTG
CCGTGGGAAAGTATTCCAATATTACGTCATCAACCCATCAGTCGTATGCC
GTCAATTTTGCTGACCAGAACTCATTGTGATTCGTATAAGGGCCTTCTAG
AGGATGGACTGAACACGGAGAACAGTTATTACATTTTGAATCCACGAAAT
GATTTGAAACGAACGGAAACAATGTTCCAACAATATTTCATCGATGTAAA
ATGGCAAGGCATTGTGGGTCGTGCGCCGACAAGTGACGAATTCTCCAAAG
CACTCACTCAACACGATTTATTTGTTTATTGTGGTCACGGGAGCGGACAA
GAATATCTTGGTTGGGatgcaatgcaacgacttcattgCAAATCCGTCGC
CCTGTTGATGGGATGCAGCAGTGGAAAACTGGTGGCGAAAGGCTCATTAG
AAGCTCAAGGAATGGTGCAATACTACTTGCTGTCTGGAAGTCCTGCGATC
GTTGCTAATTTATGGGACGTCACGGACAAAGATATTGACCTCTTTCTTCA
ACAATTGCTCGAGCTTTGGTTAACCGAGACAAAAGGAGGAGACCTTGCTT
CTTGTGTAAGCGAGGCAAGAGAAGCATGCAAATTGGAATATTTGATTGGT
GCAGCTCCCGTCGTGTATGGGTTACCACTTGTTGCTCGATAAACAGCCAA
GAGTAAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGTATTGGTGC
TTGATAAGGTCTTACAATCGTTGCCGTGGGAAAGTATTCCAATATTACGT
CATCAACCCATCAGTCGTATGCCGTCAATTTTGCTGACCAGAACTCATTG
TGATTCGTATAAGGGCCTTCTAGAGGATGGACTGAACACGGAGAACAGTT
ATTACATTTTGAATCCACGAAATGATTTGAAACGAACGGAAACAATGTTC
CAACAATATTTCATCGATGTAAAATGGCAAGGCATTGTGGGTCGTGCGCC
GACAAGTGACGAATTCTCCAAAGCACTCACTCAACACGATTTATTTGTTT
ATTGTGGTCACGGGAGCGGACAAGAATATCTTGGTTGGGatgcaatgcaa
cgacttcattgCAAATCCGTCGCCCTGTTGATGGGATGCAGCAGTGGAAA
ACTGGTGGCGAAAGGCTCATTAGAAGCTCAAGGAATGGTGCAATACTACT
TGCTGTCTGGAAGTCCTGCGATCGTTGCTAATTTATGGGACGTCACGGAC
AAAGATATTGACCTCTTTCTTCAACAATTGCTCGAGCTTTGGTTAACCGA
GACAAAAGGAGGAGACCTTGCTTCTTGTGTAAGCGAGGCAAGAGAAGCAT
GCAAATTGGAATATTTGATTGGTGCAGCTCCCGTCGTGTATGGGTTACCA
CTTGTTGCTCGATAAACAGCCAAGAGTAAGGCAAAATTGACAGTCAAGAA
GCGAAAACACATTGTATTGGTGCTTGATAAGGTCTTACAATCGTTGCCGT
GGGAAAGTATTCCAATATTACGTCATCAACCCATCAGTCGTATGCCGTCA
ATTTTGCTGACCAGAACTCATTGTGATTCGTATAAGGGCCTTCTAGAGGA
TGGACTGAACACGGAGAACAGTTATTACATTTTGAATCCACGAAATGATT
TGAAACGAACGGAAACAATGTTCCAACAATATTTCATCGATGTAAAATGG
CAAGGCATTGTGGGTCGTGCGCCGACAAGTGACGAATTCTCCAAAGCACT
CACTCAACACGATTTATTTGTTTATTGTGGTCACGGGAGCGGACAAGAAT
ATCTTGGTTGGGatgcaatgcaacgacttcattgCAAATCCGTCGCCCTG
TTGATGGGATGCAGCAGTGGAAAACTGGTGGCGAAAGGCTCATTAGAAGC
TCAAGGAATGGTGCAATACTACTTGCTGTCTGGAAGTCCTGCGATCGTTG
CTAATTTATGGGACGTCACGGACAAAGATATTGACCTCTTTCTTCAACAA
TTGCTCGAGCTTTGGTTAACCGAGACAAAAGGAGGAGACCTTGCTTCTTG
TGTAAGCGAGGCAAGAGAAGCATGCAAATTGGAATATTTGATTGGTGCAG
CTCCCGTCGTGTATGGGTTACCACTTGTTGCTCGATAAACAGCCAAGAGT
AAGGCAAAATTGACAGTCAAGAAGCGAAAACACATTGTATTGGTGCTTGA
TAAGGTCTTACAATCGTTGCCGTGGGAAAGTATTCCAATATTACGTCATC
AACCCATCAGTCGTATGCCGTCAATTTTGCTGACCAGAACTCATTGTGAT
TCGTATAAGGGCCTTCTAGAGGATGGACTGAACACGGAGAACAGTTATTA
CATTTTGAATCCACGAAATGATTTGAAACGAACGGAAACAATGTTCCAAC
AATATTTCATCGATGTAAAATGGCAAGGCATTGTGGGTCGTGCGCCGACA
AGTGACGAATTCTCCAAAGCACTCACTCAACACGATTTATTTGTTTATTG
TGGTCACGGGAGCGGACAAGAATATCTTGGTTGGGatgcaatgcaacgac
ttcattgCAAATCCGTCGCCCTGTTGATGGGATGCAGCAGTGGAAAACTG
GTGGCGAAAGGCTCATTAGAAGCTCAAGGAATGGTGCAATACTACTTGCT
GTCTGGAAGTCCTGCGATCGTTGCTAATTTATGGGACGTCACGGACAAAG
ATATTGACCTCTTTCTTCAACAATTGCTCGAGCTTTGGTTAACCGAGACA
AAAGGAGGAGACCTTGCTTCTTGTGTAAGCGAGGCAAGAGAAGCATGCAA
ATTGGAATATTTGATTGGTGCAGCTCCCGTCGTGTATGGGTTACCACTTG
TTGCTCGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032634XLOC_032634Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051481-exon-scaffold_202-1491911889:41781..41846TCONS_00051481-exon-scaffold_202-1491911889:41781..41846Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1510915933:41781..41846TCONS_00051481-exon-scaffold_202-1510915933:41781..41846Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1575043694:41781..41846TCONS_00051481-exon-scaffold_202-1575043694:41781..41846Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1491911889:42041..42145TCONS_00051481-exon-scaffold_202-1491911889:42041..42145Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1510915933:42041..42145TCONS_00051481-exon-scaffold_202-1510915933:42041..42145Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1575043694:42041..42145TCONS_00051481-exon-scaffold_202-1575043694:42041..42145Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1491911889:42503..42606TCONS_00051481-exon-scaffold_202-1491911889:42503..42606Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1510915933:42503..42606TCONS_00051481-exon-scaffold_202-1510915933:42503..42606Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1575043694:42503..42606TCONS_00051481-exon-scaffold_202-1575043694:42503..42606Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1491911889:42926..43006TCONS_00051481-exon-scaffold_202-1491911889:42926..43006Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1510915933:42926..43006TCONS_00051481-exon-scaffold_202-1510915933:42926..43006Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1575043694:42926..43006TCONS_00051481-exon-scaffold_202-1575043694:42926..43006Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1491911889:44666..44774TCONS_00051481-exon-scaffold_202-1491911889:44666..44774Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1510915933:44666..44774TCONS_00051481-exon-scaffold_202-1510915933:44666..44774Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1575043694:44666..44774TCONS_00051481-exon-scaffold_202-1575043694:44666..44774Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1491911889:45007..45062TCONS_00051481-exon-scaffold_202-1491911889:45007..45062Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1510915933:45007..45062TCONS_00051481-exon-scaffold_202-1510915933:45007..45062Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1575043694:45007..45062TCONS_00051481-exon-scaffold_202-1575043694:45007..45062Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1491911889:45429..45893TCONS_00051481-exon-scaffold_202-1491911889:45429..45893Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1510915933:45429..45893TCONS_00051481-exon-scaffold_202-1510915933:45429..45893Clytia hemisphaericaexon
TCONS_00051481-exon-scaffold_202-1575043694:45429..45893TCONS_00051481-exon-scaffold_202-1575043694:45429..45893Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051481-proteinTCONS_00051481-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_202supercontigscaffold_202:41781..45893 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.5709	21.3259	7.13175	4.36167	26.7595	20.7408	8.95634	9.85322	7.18682	10.2376	7.05487	6.27069	5.58806	4.67479	6.63253	8.05022	12.1887	9.84345	2.23833	2.83617	6.4345	7.0753	19.6089	15.5522	9.33384	9.99598	3.08169	3.12317	13.0153	13.9394
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR030397SEPARIN_core_dom
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008233peptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008233 peptidase activity
Blast
[Close]
BLAST of TCONS_00051481 vs. Swiss-Prot (Human)
Match: ESPL1 (Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3)

HSP 1 Score: 213.386 bits (542), Expect = 9.045e-61
Identity = 109/238 (45.80%), Postives = 158/238 (66.39%), Query Frame = 1 
Query:   22 LTVKKRKHIVLVLDKVLQSLPWESIPILRHQPISRMPSI--LLTRTHCDSYKG--LLEDGLNTENSYYILNPRNDLKRTETMFQQYFI-DVKWQGIVGRAPTSDEFSKALTQHDLFVYCGHGSGQEYLGWDAMQRLHCKSVALLMGCSSGKLVAKGSLEAQGMVQYYLLSGSPAIVANLWDVTDKDIDXXXXXXXXXXXXXXKGGDLASCVSEAREACKLEYLIGAAPVVYGLPLVAR 720
            LTV    H+VLVLDK LQ LPWES+P L+  P++R+PS   LL+ +    Y    +L  G++  +++Y+LNP N+L  TE  F+  F  +  W+G+VG  P  ++  +ALT+HDL++Y GHG+G  +L   A+ RL C++VALL GCSS  L  +G+LE  G+V  Y+++G P  + NLWDVTD+DID + + LL+ WL    G  L   V++AR+A +L+YLIGAAP+ YGLP+  R
Sbjct: 1883 LTVPSNSHLVLVLDKDLQKLPWESMPSLQALPVTRLPSFRFLLSYSIIKEYGASPVLSQGVDPRSTFYVLNPHNNLSSTEEQFRANFSSEAGWRGVVGEVPRPEQVQEALTKHDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVRGNLEGAGIVLKYIMAGCPLFLGNLWDVTDRDIDRYTEALLQGWLGAGPGAPLLYYVNQARQAPRLKYLIGAAPIAYGLPVSLR 2120
The following BLAST results are available for this feature:
BLAST of TCONS_00051481 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ESPL19.045e-6145.80Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3[more]
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