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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051501 ID=TCONS_00051501|Name=TCONS_00051501|organism=Clytia hemisphaerica|type=transcript|length=1251bp
acacatacataaactctgTAATGTTAAGAAAGGTGAaggctttgaaattt
tttcgacGTGTTATTAATTATCCGCACAAATATCTCTGTTTATAAGTTCA
AACAATTCATCAAAACTTTCCATGGTGTCCGAGTCATCGACGAAAGGACA
TTTCACATCTTtcattttatacattttttccATTGTCGTAAATAAAGAAT
AGCAATTGAATTCAATAACAAAAACATGGAAAATCTCTGGTGCAATTACT
ATGTTCTGATCGTAATCTGAAAACCTAATGTGATTGGATTGATTCTCGAT
AAATGTGGTATAGTCAGCGTAATCTTTCACATGATTTAAAGAATGAAATA
CTATCTTTAATGGttctttgtttaactttttcCGTCTCTCGTTGACGTTT
TTTGTAATCCACATAGCCGGCGGCAGGTAGGCATCAGTTaaatgaaaagt
tttgatatgaATTTCCTCAATATCTTTCAAACAAGTTTCATTGAAGAGAT
GTTTAGACATTGGTAGCGATTGATAAAACTGATATCTGTTATAATCAGGG
TTCTTTATGAGATTGGTCAAATCTGCTAGATGCTGATGAAGATACATTTT
GGTTGTAAATCTACGGAAGTCTGTAAATAAGAGTCTGTGAATTGGCATCC
AGAATTCTGAAGGACATGATTCTTGATCACAAAGAACAATAACATTCCAG
CTATCATCTTGAAGTTTCTTAAGTGTGTTAGAAATTCTCATATCATACCA
CATATAGTCAGTCGCAATGAAAAATGTCTGATCGAAAGAATCATTGTTAC
TTGACATTAGTCCATCTTTATtattatgtaatttttcaaGGAGACTCAAA
ACCCTTTTCTCAATCGTCGGAAAGTAATCAAGAGCGGCTTCCAGCGGGTC
CTTCAACTGTCTCTCGACATGGTTGACCGTGTTTTTATCCCAACGTATAA
CACGATCTTCGTTCGGTAaatatatatttatttcaatGCAAGGATGATTC
TCTGCTATCTCTGGTAAATGATAGTTCAAAAACACATCATACATTGTCCA
GGTCATACCCCGTATAACCATAGTGACATTTCTATTTTGGGTACAACTCA
GTGTTTGAAAGTCTGTTGATTTGTTTAGAATGTCGGTCCCAGTAAagcaa
aaaacttgaaaagttaATACGAGAAAAATAGTGAACATTTTTTAAGACAA
GTTTTCTCAACTAATCTTTCACTCTCTATGTAtactttttgatgtgaaaa
g Run BLAST on NCBI transcript from alignment at scaffold_202:514342..515592+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051501 ID=TCONS_00051501|Name=TCONS_00051501|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at scaffold_202:514342..515592+ (Clytia hemisphaerica)
acacatacataaactctgTAATGTTAAGAAAGGTGAaggctttgaaattt
tttcgacGTGTTATTAATTATCCGCACAAATATCTCTGTTTATAAGTTCA
AACAATTCATCAAAACTTTCCATGGTGTCCGAGTCATCGACGAAAGGACA
TTTCACATCTTtcattttatacattttttccATTGTCGTAAATAAAGAAT
AGCAATTGAATTCAATAACAAAAACATGGAAAATCTCTGGTGCAATTACT
ATGTTCTGATCGTAATCTGAAAACCTAATGTGATTGGATTGATTCTCGAT
AAATGTGGTATAGTCAGCGTAATCTTTCACATGATTTAAAGAATGAAATA
CTATCTTTAATGGttctttgtttaactttttcCGTCTCTCGTTGACGTTT
TTTGTAATCCACATAGCCGGCGGCAGGTAGGCATCAGTTaaatgaaaagt
tttgatatgaATTTCCTCAATATCTTTCAAACAAGTTTCATTGAAGAGAT
GTTTAGACATTGGTAGCGATTGATAAAACTGATATCTGTTATAATCAGGG
TTCTTTATGAGATTGGTCAAATCTGCTAGATGCTGATGAAGATACATTTT
GGTTGTAAATCTACGGAAGTCTGTAAATAAGAGTCTGTGAATTGGCATCC
AGAATTCTGAAGGACATGATTCTTGATCACAAAGAACAATAACATTCCAG
CTATCATCTTGAAGTTTCTTAAGTGTGTTAGAAATTCTCATATCATACCA
CATATAGTCAGTCGCAATGAAAAATGTCTGATCGAAAGAATCATTGTTAC
TTGACATTAGTCCATCTTTATtattatgtaatttttcaaGGAGACTCAAA
ACCCTTTTCTCAATCGTCGGAAAGTAATCAAGAGCGGCTTCCAGCGGGTC
CTTCAACTGTCTCTCGACATGGTTGACCGTGTTTTTATCCCAACGTATAA
CACGATCTTCGTTCGGTAaatatatatttatttcaatGCAAGGATGATTC
TCTGCTATCTCTGGTAAATGATAGTTCAAAAACACATCATACATTGTCCA
GGTCATACCCCGTATAACCATAGTGACATTTCTATTTTGGGTACAACTCA
GTGTTTGAAAGTCTGTTGATTTGTTTAGAATGTCGGTCCCAGTAAagcaa
aaaacttgaaaagttaATACGAGAAAAATAGTGAACATTTTTTAAGACAA
GTTTTCTCAACTAATCTTTCACTCTCTATGTAtactttttgatgtgaaaa
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051501-exon-scaffold_202-1491911889:514342..515592 | TCONS_00051501-exon-scaffold_202-1491911889:514342..515592 | Clytia hemisphaerica | exon |
| TCONS_00051501-exon-scaffold_202-1510915933:514342..515592 | TCONS_00051501-exon-scaffold_202-1510915933:514342..515592 | Clytia hemisphaerica | exon |
| TCONS_00051501-exon-scaffold_202-1575043694:514342..515592 | TCONS_00051501-exon-scaffold_202-1575043694:514342..515592 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:514342..515592 + |
Blast
The following BLAST results are available for this feature:
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