|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051706 ID=TCONS_00051706|Name=TCONS_00051706|organism=Clytia hemisphaerica|type=transcript|length=1001bp
gaaatagttatgtccgcaacatgaaATACATATGAAAGAGGTAAATTAAC
TGGAAATCTTGCCAATGGAAAattatgaaacttttttctgGTTGTAACCA
ACTTAAAATGACCTTAGATGcaataatttgtcaaagaaacctAAAATTGG
TGTTTGGAGGTTGAGAAAACTTCATGATTTGtcgcggacataactttttg
ttgcggacataactgaTTTTTGGAGAAACTGTTTTGTTTCACCTCTCCCA
ACAAAATAGCCTTTGAgacttcaaatttgtataaaatgacCCCAAATGTA
ACCCTTGACATAGAAAAATGATTCAGCGAGTAAGGATAAatccttgaaaa
atttaaaggatAAAATAGTGTGCGGACATAACTCAAAAATGTGAACGGAA
ACAAGACATTGTTCactacaaaataatttttcgcatTGACCAAGATAACT
GGCATTTTTTTGCAACTTGCTCTAGTTTCCCATAATCTGGGAAGGATTTA
AAATTTAGGGGGTTGAAGGGGATGTTGTTGGCAATGCATTTGGGTTAAAA
AATTGATTGGCTAATGGTGTAACAAGGCTTAAAGGTTGTAATGTTCTGTT
CCTTTTAAGCcagattttgttgatttatcAATGAATCCTTTATCAAAAGG
CAGACTTCATGCTATGTTTGAGACAATATTATGATTTTACTGACAAATAA
TAGGACAAACTGGCTAATTTATTGTAACATGTTACTTCTTTAGCCAATAT
CTTTGGTTTAACGATGTGCAATTTCCGCAAGTAACAACAGCGGGTAGTTA
ACACACTAAAGTTTCATTTCCAGAGCTTGCTTTAATTATTTTcacctgaa
ataaaaatttagttcaattttaatgaaaatgttacATTTCTAGCCATTTT
CAGCAAAATAACCTAAAAATCCAAATTCTTCCAACTCTAGTGATTTTGGA
CCTGTGTTACCTTTTTAGCCCAgaaattttattgatctagaagcTATTTT
G Run BLAST on NCBI transcript from alignment at scaffold_202:689262..690262 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051706 ID=TCONS_00051706|Name=TCONS_00051706|organism=Clytia hemisphaerica|type=transcript|length=1001bp|location=Sequence derived from alignment at scaffold_202:689262..690262 (Clytia hemisphaerica)
CAAAATAgcttctagatcaataaaatttcTGGGCTAAAAAGGTAACACAG
GTCCAAAATCACTAGAGTTGGAAGAATTTGGATTTTTAGGTTATTTTGCT
GAAAATGGCTAGAAATgtaacattttcattaaaattgaactaaattttta
tttcaggtgAAAATAATTAAAGCAAGCTCTGGAAATGAAACTTTAGTGTG
TTAACTACCCGCTGTTGTTACTTGCGGAAATTGCACATCGTTAAACCAAA
GATATTGGCTAAAGAAGTAACATGTTACAATAAATTAGCCAGTTTGTCCT
ATTATTTGTCAGTAAAATCATAATATTGTCTCAAACATAGCATGAAGTCT
GCCTTTTGATAAAGGATTCATTgataaatcaacaaaatctgGCTTAAAAG
GAACAGAACATTACAACCTTTAAGCCTTGTTACACCATTAGCCAATCAAT
TTTTTAACCCAAATGCATTGCCAACAACATCCCCTTCAACCCCCTAAATT
TTAAATCCTTCCCAGATTATGGGAAACTAGAGCAAGTTGCAAAAAAATGC
CAGTTATCTTGGTCAatgcgaaaaattattttgtagtGAACAATGTCTTG
TTTCCGTTCACATTTTTGAGTTATGTCCGCACACTATTTTatcctttaaa
tttttcaaggatTTATCCTTACTCGCTGAATCATTTTTCTATGTCAAGGG
TTACATTTGGGgtcattttatacaaatttgaagtcTCAAAGGCTATTTTG
TTGGGAGAGGTGAAACAAAACAGTTTCTCCAAAAAtcagttatgtccgca
acaaaaagttatgtccgcgaCAAATCATGAAGTTTTCTCAACCTCCAAAC
ACCAATTTTaggtttctttgacaaattattgCATCTAAGGTCATTTTAAG
TTGGTTACAACcagaaaaaagtttcataatTTTCCATTGGCAAGATTTCC
AGTTAATTTACCTCTTTCATATGTATttcatgttgcggacataactattt
c
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051706-exon-scaffold_202-1491911889:689262..690262 | TCONS_00051706-exon-scaffold_202-1491911889:689262..690262 | Clytia hemisphaerica | exon |
| TCONS_00051706-exon-scaffold_202-1510915933:689262..690262 | TCONS_00051706-exon-scaffold_202-1510915933:689262..690262 | Clytia hemisphaerica | exon |
| TCONS_00051706-exon-scaffold_202-1575043694:689262..690262 | TCONS_00051706-exon-scaffold_202-1575043694:689262..690262 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:689262..690262 . |
Blast
The following BLAST results are available for this feature:
|
