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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051721 ID=TCONS_00051721|Name=TCONS_00051721|organism=Clytia hemisphaerica|type=transcript|length=758bp
gggatGGACAGTGATGGAGTACTGTGACTTCAATCGCTTTTGCAACTGCC
ACATCGCTGGAATAAAGTTAAAACAAACATGTTCACTATTTGCATCATTT
GTAAGTTTTGAAACTCTTTTACGTCTAAAAAGTGTCTTGAATAATTGTCA
ATTATCAAACTTCGTCATCAATGACATAATTAAATGATTGATATAAAGTT
TGATGGAAAAAATAAACAAGTAAGGAACTGTTCGAACTgtaaatcataaa
gaaaatactATCCACAGAATTTTAGAAGCGTTATAAAGAAATGTGTGTTT
TTAGAGAGAAATGAAAAGGAAATGACCACCTTCAAtagtttgtttatgtt
ttggGTGAGTTTTGGCGGTTTGTACCCTTTTCTTTCAGTTATTAAGTCTC
AGTTGTGGATGTTTAATGACGTGGATtcaccaaaacaaaacattgtGGAT
GATGGGGGTGCACGAGATAACAAAATATGTTGATTGTATTATGAAACAAC
ACCTCTGCTAGATGACATCATCAGTCTTCACACTCTCTGACAAACACCCA
GAGTTATTTCAGTGACcaaacaatcaaaatattaAGACGCAACCAAAACG
CAATAAGAACTCTTGCCACATCTCTCTTTAGAAGCTCGTCCGTTACATCC
CAGTTGCAGCAATTGTAAGCCTCGATAAACATTGCGAGATTGAAGCCTCC
TTCCCACTGGGAAATCACAATGATATGGAATTGAATTCTGCGCTTTAAAC
GATATTTT Run BLAST on NCBI transcript from alignment at scaffold_203:6206..7030- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051721 ID=TCONS_00051721|Name=TCONS_00051721|organism=Clytia hemisphaerica|type=transcript|length=825bp|location=Sequence derived from alignment at scaffold_203:6206..7030- (Clytia hemisphaerica)
GGGATGGACAGTGATGGAGTACTGTGACTTCAATCGCTTTTGCAACTGCC
ACATCGCANGAAGCCCGTACCAATATGGCGGATGGACAGTGATGGAGTAC
TGTGACTTCAATCGCTTTTGCAACTGGAATAAAGTTAAAACAAACATGTT
CACTATTTGCATCATTTGTAAGTTTTGAAACTCTTTTACGTCTAAAAAGT
GTCTTGAATAATTGTCAATTATCAAACTTCGTCATCAATGACATAATTAA
ATGATTGATATAAAGTTTGATGGAAAAAATAAACAAGTAAGGAACTGTTC
GAACTGTAAATCATAAAGAAAATACTATCCACAGAATTTTAGAAGCGTTA
TAAAGAAATGTGTGTTTTTAGAGAGAAATGAAAAGGAAATGACCACCTTC
AATAGTTTGTTTATGTTTTGGGTGAGTTTTGGCGGTTTGTACCCTTTTCT
TTCAGTTATTAAGTCTCAGTTGTGGATGTTTAATGACGTGGATTCACCAA
AACAAAACATTGTGGATGATGGGGGTGCACGAGATAACAAAATATGTTGA
TTGTATTATGAAACAACACCTCTGCTAGATGACATCATCAGTCTTCACAC
TCTCTGACAAACACCCAGAGTTATTTCAGTGACCAAACAATCAAAATATT
AAGACGCAACCAAAACGCAATAAGAACTCTTGCCACATCTCTCTTTAGAA
GCTCGTCCGTTACATCCCAGTTGCAGCAATTGTAAGCCTCGATAAACATT
GCGAGATTGAAGCCTCCTTCCCACTGGGAAATCACAATGATATGGAATTG
AATTCTGCGCTTTAAACGATATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051721-exon-scaffold_203-1575043694:6974..7030 | TCONS_00051721-exon-scaffold_203-1575043694:6974..7030 | Clytia hemisphaerica | exon |
| TCONS_00051721-exon-scaffold_203-1575043694:6206..6906 | TCONS_00051721-exon-scaffold_203-1575043694:6206..6906 | Clytia hemisphaerica | exon |
| TCONS_00051721-exon-scaffold_203-1510915933:6974..7030 | TCONS_00051721-exon-scaffold_203-1510915933:6974..7030 | Clytia hemisphaerica | exon |
| TCONS_00051721-exon-scaffold_203-1510915933:6206..6906 | TCONS_00051721-exon-scaffold_203-1510915933:6206..6906 | Clytia hemisphaerica | exon |
| TCONS_00051721-exon-scaffold_203-1491911889:6974..7030 | TCONS_00051721-exon-scaffold_203-1491911889:6974..7030 | Clytia hemisphaerica | exon |
| TCONS_00051721-exon-scaffold_203-1491911889:6206..6906 | TCONS_00051721-exon-scaffold_203-1491911889:6206..6906 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_203 | supercontig | scaffold_203:6206..7030 - |
Blast
The following BLAST results are available for this feature:
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