TCONS_00051774 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051774
Unique NameTCONS_00051774
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051774 ID=TCONS_00051774|Name=TCONS_00051774|organism=Clytia hemisphaerica|type=transcript|length=178bp
ATTATTTCACACgcattttatttaattatcatttGATTTCTCAAGAGTGT
TATatattcattgtttttatatcttGTCAAACTAgtttttttgtatcaaa
tctattataaaaaggccaaCTTTTTCTCACTCGCTACTCAGTCACAAGTT
GACTACGAGAGAGTCAACATCAATATGA
Run BLAST on NCBI

transcript from alignment at scaffold_204:106851..107028

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051774 ID=TCONS_00051774|Name=TCONS_00051774|organism=Clytia hemisphaerica|type=transcript|length=178bp|location=Sequence derived from alignment at scaffold_204:106851..107028 (Clytia hemisphaerica)
TCATATTGATGTTGACTCTCTCGTAGTCAACTTGTGACTGAGTAGCGAGT
GAGAAAAAGttggcctttttataatagatttgatacaaaaaaacTAGTTT
GACaagatataaaaacaatgaatatATAACACTCTTGAGAAATCaaatga
taattaaataaaatgcGTGTGAAATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032782XLOC_032782Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051774-exon-scaffold_204-1491911889:106851..107028TCONS_00051774-exon-scaffold_204-1491911889:106851..107028Clytia hemisphaericaexon
TCONS_00051774-exon-scaffold_204-1510915933:106851..107028TCONS_00051774-exon-scaffold_204-1510915933:106851..107028Clytia hemisphaericaexon
TCONS_00051774-exon-scaffold_204-1575043694:106851..107028TCONS_00051774-exon-scaffold_204-1575043694:106851..107028Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_204supercontigscaffold_204:106851..107028 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051774 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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