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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051945 ID=TCONS_00051945|Name=TCONS_00051945|organism=Clytia hemisphaerica|type=transcript|length=1086bp
CAATCTTTGACAATTGagaacaaaagcaaaaaaaaataatacaattGATT
TTTACATAAAACAACTTATAACTTCTTctgtacatttttttgtttcatcc
tCTTTTTAATTATATATTGTTTATAAATATTCACATTGTTTGTGATCTGA
TtgtaaaaaataactttgataATAGTTTATTAATATCTAAGGAAGAGGTT
TCATACACTGGGATGCATCTTCTCACAAGaatcaatgaaaaagaagatta
gAATTATCCAACCTAAATATCTCGAacttttttttatctgtttGTGAAAT
CTTTATTCGAGACTTAATGTGTAATGATACATGTTTACTCTTGGTGGAAG
AATACTAGGAAAAATGGAAGCAAATTTGgaaacaaatagaaatagaaaaa
gtaattgaaaaaatattaactGAAGTTGAAAACGACTGTAGTTTCTTTAA
AACCTTTGGATGAGAGAGCTAGTGAGATTTCTTAGTTAACCAATCAATAG
ATTTAGAGTCCAAACTATTGTCCAAACTACTAGCAAAAACTATTGCCTCT
CTTGACTTACTTAGGTATTCGGGCGGGTTCAGAAAACAGGGATGCATGAG
TCACTGCTCCCCAAGGTTTAGATCTACTGGTACAGGACCGTTCAAATCGG
GCGATACATATTATACGATATGTCATTAACATTTGTGAGTAAACATCTGG
TTACGCCAACGTTCAAAATACAGAAACTTAGTAAAGATTTAATGACGTCT
GCAAAATTAATAATCTAATTACGAGGCTATTAGAGTGCATGAATATAAAT
CATGAGTTCCCTTAGCTACAGCCATTTCAAAACTACATAAATTCAAGGCT
TCAATATGAAGTATAGTATAgataagaaaacaaagattaaaaaaattgaa
tacatatTGACCCACGATAACTCAAAAACATCAATCATCGTACAGTATAA
TGGCAAAATAAATtatcttgaaaaaaattatatatttttttagaatttgc
AAAAACAAAGAGATGtagataaaaaatgataaagttAAGAGATTAAAGAT
AGGTTTCCATCACGGCTAAAGTTCTAATTtcaaaga Run BLAST on NCBI transcript from alignment at scaffold_206:75460..76545 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051945 ID=TCONS_00051945|Name=TCONS_00051945|organism=Clytia hemisphaerica|type=transcript|length=1086bp|location=Sequence derived from alignment at scaffold_206:75460..76545 (Clytia hemisphaerica)
tctttgaAATTAGAACTTTAGCCGTGATGGAAACCTATCTTTAATCTCTT
aactttatcattttttatctaCATCTCTTTGTTTTTgcaaattctaaaaa
aatatataatttttttcaagataATTTATTTTGCCATTATACTGTACGAT
GATTGATGTTTTTGAGTTATCGTGGGTCAatatgtattcaatttttttaa
tctttgttttcttatcTATACTATACTTCATATTGAAGCCTTGAATTTAT
GTAGTTTTGAAATGGCTGTAGCTAAGGGAACTCATGATTTATATTCATGC
ACTCTAATAGCCTCGTAATTAGATTATTAATTTTGCAGACGTCATTAAAT
CTTTACTAAGTTTCTGTATTTTGAACGTTGGCGTAACCAGATGTTTACTC
ACAAATGTTAATGACATATCGTATAATATGTATCGCCCGATTTGAACGGT
CCTGTACCAGTAGATCTAAACCTTGGGGAGCAGTGACTCATGCATCCCTG
TTTTCTGAACCCGCCCGAATACCTAAGTAAGTCAAGAGAGGCAATAGTTT
TTGCTAGTAGTTTGGACAATAGTTTGGACTCTAAATCTATTGATTGGTTA
ACTAAGAAATCTCACTAGCTCTCTCATCCAAAGGTTTTAAAGAAACTACA
GTCGTTTTCAACTTCagttaatattttttcaattactttttctatttcta
tttgtttcCAAATTTGCTTCCATTTTTCCTAGTATTCTTCCACCAAGAGT
AAACATGTATCATTACACATTAAGTCTCGAATAAAGATTTCACaaacaga
taaaaaaaagtTCGAGATATTTAGGTTGGATAATTctaatcttctttttc
attgattCTTGTGAGAAGATGCATCCCAGTGTATGAAACCTCTTCCTTAG
ATATTAATAAACTATtatcaaagttattttttacaATCAGATCACAAACA
ATGTGAATATTTATAAACAATATATAATTAAAAAGaggatgaaacaaaaa
aatgtacagAAGAAGTTATAAGTTGTTTTATGTAAAAATCaattgtatta
tttttttttgcttttgttctCAATTGTCAAAGATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051945-exon-scaffold_206-1491911889:75460..76545 | TCONS_00051945-exon-scaffold_206-1491911889:75460..76545 | Clytia hemisphaerica | exon |
| TCONS_00051945-exon-scaffold_206-1510915933:75460..76545 | TCONS_00051945-exon-scaffold_206-1510915933:75460..76545 | Clytia hemisphaerica | exon |
| TCONS_00051945-exon-scaffold_206-1575043694:75460..76545 | TCONS_00051945-exon-scaffold_206-1575043694:75460..76545 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_206 | supercontig | scaffold_206:75460..76545 . |
Blast
The following BLAST results are available for this feature:
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