TCONS_00051994 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051994
Unique NameTCONS_00051994
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051994 ID=TCONS_00051994|Name=TCONS_00051994|organism=Clytia hemisphaerica|type=transcript|length=2107bp
TCTAGTGTTGGCATTGCTGAAAGTAAATGTTGGTGTCCAAGACTGTCAGT
TGTGTTCAATGTTCTTCTCTCTGCAAGAATCACAGCATCATTCTTGAGTA
ACATATCTGACTGCGATGAAACATTCAATTATTGGGAACCAACACATTAC
CTGATGTATGGATCTGGCTTTCAAACCTGGGAGTATTCTCCAGAATATGC
AATCAGGTCTTATGCCTACCTGTACTTCTATACCATGCCAGCAAAGATTA
TCAAAAATCTATTTCTGGCAAATAAGATAACTGTCTTTTATTATGTTCGG
TTTATCCTTGGAATTATATGTGCAGCTTGCGAAACATACTTTTTCAACTC
ACTTTTGAATCAATTTGGAAAACACGTTGCAAgaatgtattttctttttg
cCATAATCAATACTGGAATGTTTATATCTTCAACAGCTTTTCTACCAAGC
TCATTTGCTATGTATTCAGGCTTGCTTGCTTTTGGTGGATGGTTTGATAG
AAACAATGCTgtAGCAATATTTGGTATTGCCATAGGAACCCTACTTGGTT
GGCCTTTTTTTGCCATTCTTGGgGTTCCCATTGCATTTGATATCATTTTT
CGTCAAGGTAACCTgtggaagttcattctatggtctGGTGCAATCTTCCT
TGCCATTATGATTCCTATGGTTTCTCTCGACAGCCACTACTATGGAAAAC
AAGTGATAGCTCCACTAAACATTTTCCTGTACAATGTTTTTGGACAAGGA
GGGCCAGATCTTTATGGTGTAGAATCTTGgacattttatttcataaatgG
GTTTTTAAACTTCAATGTCACCTTCATTATGGCTTTGCTCTCCCTTCCAA
TATGTATCATCTGTGACTACATAACGCAGAAGAAAATTGgtccCCTGAAT
CTACCTACTTGGATTGTTTTGTCACCCATCTACATTTGGGGATTGGTATT
TTTCACAAGACCTCATAAGGAGGAGAGATTTCTGTTTCCAATTTACCCTT
TGGTCATCTTCAGTGCAGTTTTCGCTTTGTCAAAAATACAGGAATTATAT
CATCATTTGTTGAGTGCAAAAAATAAGCTTCAACACTATTCTGATAGCTC
AAATTGGCTTgcaatatttgtttttatgGTTTACACAATATTTTCATTGT
CAAGATCTTCTGCACTTTATATTGGTTATCATGCTCCTCTGGATGTTTAT
CCAGAACTAACAAACCTGGTGACTCCTTATGACCCAGACACAAAACCAAT
GTTTCATTCTGAGAAAAAGATCAATGTGTGTGTTGGCAGGGAATGGTATC
GTTTTCCGAGCAGTTTCTTTCTTCCGGAAAActGGGAGCTTCACTTTGTT
AAGTCTCAGTTTGCTGGTCAATTACCACAGCCATATCAACAAGGGGCTGA
TGCAACCAAAATCATTCCACGTAACATGAATGATATGAATAGAGAAGAGT
TCAGTCGTTATattaatgttgaaaagtgTCATCTGCTGATTGATCTTGAT
TTGCCAACTGCAAGTGAACATGAGAAGAACTATTCCCAAATAAAGAACAA
GTGGCAAATTAtatattcaaagaaatttttggaTGCATCAAGGTCGCATC
AGCTTTACAGAGCATTCTATGTACCATTTCTATCAGAGAAACATTGCact
tttgttgactacaatatATTAAGAAGAATCAATATGACACCAAAGAGGAA
AGCTTAGCATAACATAATAATAATATTCTGCTGTTGTTGTTTGTGAGCTT
GTTGAGTTGCTTCAATACTGGCTGTCATTGAGCAATGATTTCTTAAAACA
ACATTGGCAAAGTACACTCCTACTTTGCCAATGTTGTTTTAAGAAATCAT
TGCCCAATGCTTTATATCAGTACTGTCTAAAGAGCATTATTTTCACTCTC
AGCTTTTGTATTAAATATTTTATCTTGTGTCAGCctatttataaacaaaa
ttaaTCACGAGATAATTTTTATAGGATATtttgaatttggatattttcta
gCCCTTAAATTATGTATCaggtttttggaaaatttgtaggaatctatttt
atatattttattaaaatttcaaataatatgAACAAAAGATTGTTTGGTTG
GTGGGTT
Run BLAST on NCBI

transcript from alignment at scaffold_208:74927..85453-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051994 ID=TCONS_00051994|Name=TCONS_00051994|organism=Clytia hemisphaerica|type=transcript|length=10527bp|location=Sequence derived from alignment at scaffold_208:74927..85453- (Clytia hemisphaerica)
TCTAGTGTTGGCATTGCTGAAAGTAAATGTTGGTGTCCAAGACTGTCAGT
TGTGTTCAATGTTCTTCTCTCTGCAAGAATCACAGCATCATTCTTGAGTA
ACATATCTGACTGCGATGAAACATTCAATTATTGGGAACCAGTAAGACAT
GATTTTCCTAGTTTCTTAACCTTCAGACACTTANTAAATGTTGGTGTCCA
AGACTGTCAGTTGTGTTCAATGTTCTTCTCTCTGCAAGAATCACAGCATC
ATTCTTGAGTAACATATCTGACTGCGATGAAACATTCAATTATTGGGAAC
CAGTAAGACATGATTTTCCTAGTTTCTTAACCTTCAGACCCTTAGGATGA
TGAAAATTAGTTTCTTTTATATGGAATTCCTATCAAAACTTTTTAAGAGA
ATTTAGTCCTAGGGCCCCGTTTTCATCAGTTTTTATTTGACGTTGCATCA
ATAAGAGATGTTGAAGTGCTCTCCGAGAAATTTTTTAAAAACCTCCAAAG
ATGAATAATGAAGGGAAATCACAAGAAAGAAAAAATCAAAGAACAACGAT
AAATTTTTAACGTTTTCGAGCACTTTCTGAAAGCAACTTTTTTATCCAAT
TGAGCATAACTTTTGATCCAATGAATCAAATTTAATAAATGACCCATCAA
AATTTAAGTCTTATCTGTTTTTCTCCAATGAAATAGGAATTGTTCTTTTA
GATTTCAAGAAAATTAGTTTTAAAGAGGGAAACTTTTTTGTGGCGCACCC
GGTATTATTAACCTTAATCGTTATCTTTATAGACACATTACCTGATGTAT
GGATCTGGCTTTCAAACCTGGGAGTATTCTCCAGAATATGCAATCAGGTC
TTATGCCTACCTGTACTTCTATACCATGCCAGCAAAGATTATCAAAAATC
TATTTCTGGCAAATAAGGTAAGTTTCAACCTCGAGAAAAGTCTTTAAACT
AAAAGTCTTTAATAATAAAATCAGATAAAACCATGTTATAAATGAACATG
GATGCGGTTTTTTTATCCTTCTGAATGGCTTAACTAAATTCAAATTTTTT
TCTTGTAGTCTAGAGAGTTTGATAAAATTCTTTGGATTTCTTTGAGAATT
TTCATTTTTCCTCTTAGATAACTGTCTTTTATTATGTTCGGTTTATCCTT
GGAATTATATGTGCAGCTTGCGAAACATACTTTTTCAAGTAAGTCTGACT
TTGATTAGATACATAAAAGTTTTCTAGAAGGTCAAAGCTTTCGTTATTTT
TATTATATTATTAATACTTTTATCTCTGAGAACAATTTTGTTGAACTGGT
ACTTTGCTGTTGTATTTTATTAAAATTAATTGGAAATATCATAAATGGCT
TTCAGCAACGCCAACACTTCATGCAATTGTTTTGAATAAAAGTTATATTT
TCTGTTAAATTTAAGGTATCTTTAGTGTGGTACGAACTCTGACTATTTTA
AAGAAAAAATATTTATGATTTATTAAATCGTATTTTGCAGCTCACTTTTG
AATCAATTTGGAAAACACGTTGCAAGAATGTATTTTCTTTTTGCCATAAT
CAATACTGGAATGTTTATATCTTCAACAGGTATTTTTAAAAGCTTGTCCC
ACTATTTTTCCAACAACATTGATTTGCTTCATTTTTCATTAGCTTGCCAT
ATTTTCTCAATTAAGGGCTACTCTCTAATAAGTGCCTATGCTCTAAACCC
TGAGTTTTGAAACAACAATTGTGTAATCACAAGCGATCTGAAGTACAAAT
GAAATGGTGCATTCTTGAAATGTTCTTGAACTAGCGTCTGAGAATGTTCC
AGAACGCTCAAGAATGTTCGCTCGAAAACTCAATAAGAACGTTTGTGAAC
GCTTTGGAACATTCAGAAATGGTTGTTAACCTTCTTCTTCTTGAATGTTC
TAAGACATTCTTAAAAGGGAATGATCGAGAACATTCAAGAACGTACTCTA
GCGTTCTTGGAAATAGATATGTTCCATATTTTTCCTCTAATTTAACTGGA
TCGTTCCATTCTTTTTGTAATCTTTACAATTTTCACGGAATTTAATTTCG
TTATTTTTACAGTAAATCTGCGACATTAAATTCTGCAAGATTAAATTCTG
CGATACATGAATATTCTCATGATTTATAAAAACGGCTAAAAATTGGTCTT
TTTAGGGCAAAATAGGCCATAATTTAAACAAAAAATCCTCTTAACGGCAA
AATTAAATTTTGTGACAATTTCTTTCTGCTGAAATTTCTTTCCTTAAGGT
AATAAACGTTGCACCAGGCTGCCCCTTAAAATTACAGAAGTTGAATAAGT
GAATAAGCGCCCAGCCCTTATCTGAGGAAATAAAGCCTATCCTATTTATG
TTATTGGAATTTATCTCAATATATAGTTGTTGTTGACTTTGAATAAAGTT
TGAACTTTTAAAATTCTTTTTAGCTTTTCTACCAAGCTCATTTGCTATGT
ATTCAGGCTTGCTTGCTTTTGGTGGATGGTTTGATAGAAACAATGCTGTG
AGTTATCCATTCTCAATGTAGCCATTTTTTAATAACTTCTATTTTTTATA
CAACCTAACGACCTAAAGAAAATACACTTGGTTTTAAAAATGAATAGTAA
TGTACTGTTAAAACTTTCTGTTGAATTAAGCATCCTCGACAAACAGACAG
GCTTCTTTGAAGGGTCTTCCTGCATAATTAACTTAAAAAAAAGGGTTGAC
CTTGGCAACAAAAACATGTTTGAATAAGGCTCATTTCATATTTTTCTTTC
AGGTAGCAATATTTGGTATTGCCATAGGAACCCTACTTGGTTGGCCTTTT
TTTGCCATTCTTGGGTATGAAACGGGTCTAAATTTGATCCTTTTTACTTT
TCAAAATACTTCACATAAAAGCACAATTTATGTTTTAGATTTTTATTTTT
TTCCATTTCTGTCACTGTGTAGAAGGTTGAATATTCTTTTTTCTTTGTAT
TTTAGGGTTCCCATTGCATTTGATATCATTTTTCGTCAAGGTAACCTGTG
GAAGTTCATTCTATGGTCTGGTGCAATCTTCCTTGCCATTATGGTACGAT
TTGATAACATTCTTTTGTACCCACTATCTACTGGATACGTTAATAAAAGT
TTGAATTATTTTTAATGTTTTCTCTATGTTGTCCAGATCAGTAAAAATTA
TCTAGAGTAAATTTTCAAGTCAAAAATTTCTTAGAATTTAATCAAATTTT
AGCTCTTATTTCTCTGCCTCTTCTTTCTAGATTCCTATGGTTTCTCTCGA
CAGCCACTACTATGGAAAACAAGTGATAGCTCCACTAAACATTTTCCTGT
ACAATGTTTTTGGACAAGGAGGGCCAGATCTTTATGGTAATAAATTTTAC
GCATTATTACAACCTTACACAGCCCTTGAAATTCAAGTAAAAGTAAGTCG
GCACGTAAGTGCCGTCCAAATCCGGCCGAAGGCCGGCAAAATTTTGCCGA
CCTAAGCTTGTTTTTAGGTCGGCAATGCCGATCTGAGCTATATTTTAGGT
CGGCAAAGTTGTTTAAAGGCTACGGCAATGGGGAGAAGACAAACCGTGGA
CCCCCGATATGGACCCCCAATATGGACCCCCTCAAAAACGGCAAGAAATA
CCAAAAACAGCTCTGAACAACTCTAGTTTGAAATAATTTATGTCTATTTG
CACTTCCAATATCACATTGAGTACGATAAGTCTTTTTTAAGATTTATTCC
GAGTTATTCCGAGTTATTCGAACTTAACATTCTGCTGAGTTTGATCTTTT
ACTTGAGCTGCTCTGCTCAGTCCAAACAAATATGGATATACTCAAGAACA
ATGTTTTTTGGCTTAACAAACCATAGATTGAGACATGAGTTACAACTCAA
ATAACCCGAACTTTCATAATATTACCCATATTGTTTGCCTCTGAAAAAAG
ATTTCGTGGATGATGATACCTACAAAAAGTCCCTCCTATGATAATAAACT
TTTATTTTCTAGAGGAAGTTATACTAGCAACTCGAACACTCCTAAATGTA
ACTTTTCAATGTAACTCGGGCCTCATGTGCCATCTGAGAGAGCTCATTAG
CTTCTGACTGACGTCATTTTATATCCGCTTACACTACCAGCATCACATTG
GGTATAGTTCTATTATTTTGTGATTTTGTCTTAACAGANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTAAAACAACCCTCTCTGAGAAGTCACAAGCTTCTGATTGGTGTCTTTTT
ATATCCATTCACACTATCTACATCACTTTCGGTATAATAAATATTTTGAA
TGTGTTTGTCTTAAGAGACGTCATATTTTAAGATTCTGTCAATATTTTTC
TCAAATATCAACATTGTGTCAACATTTCAACAATAGAACAAATCACCCTG
AACGAACTGAATTTATGTCTAAATAACAGAATGTAACATGTAACTCTATA
ACTGTTGTAATATGTTTATATTATCTAGGACGACTATAATATAGCACAAA
TAACTACCTATTTAATGTTGGGAAATACCCACAATGCTTTTCTCGCCATT
TAAAGGGGGTCCTCCATTAGGGGTCCATATTGGTGGTCCATATTGGGGTC
CATATTGGGGGTCCATATCAGGGGTCCACGGTTTGTCTTCTCCCTACGGC
AATGTTTGTTTTTTTATTTGAGTGCGATATGGTTCTTATTAGAGACTTTC
TCTTTTAATACTTTTTGCTGTTAAGGTCGGCTTTGCTGACCTAAAAGATA
ACTTATGGTCGGCTGCCGAGAGAATCAATGAATATGGTCGGCAATGAACT
GCCGACCATACGCACTCTTTGGTCGGCTTTTAGGTCGGCACTGCCGAATG
CCGACCTGAAATTCGAGGGCTGCTTACATGTCCCTTGGCTTTGATGGGCT
AATGACTTATTTTAAATTGAATCTTGTCTTTACATCTGTAAGAAAGACGT
AATTTCTTTTATCAACATTACTTTTGTTTTAGAATTTTTACCATATTTCT
ATTTTAGGTGTAGAATCTTGGACATTTTATTTCATAAATGGGTTTTTAAA
CTTCAATGTCACCTTCATTATGGCTTTGCTCTCCCTTCCAATATGTGTAA
GTCCAGTTTGTTCATTAAAACTGAAGTTAATTTAGTTTTAGCCAATCCGC
CTTATCTCATAAATCCATGTTTAGGAAGATTTTTTCACCGTTTGCGAAGC
ATTTTTAGTATTTTGCAATGTTGTTTGAAAGAAAGTGCAAAAGTATCTTC
AATGCATTTCTCTAGAAAAGCGAAGTAAGACTTAGGCTGTTGTGTGAGAT
TGTAGACAAAGCTAAGTTAGTGAGTTTCTAAAACAATAGACAGATAAATT
AAGAAAGTTTTGAAGTAGCGAGTTTATAAAGCAATAGATAAACGAATGAA
TGAAGCAGCGAAGTAGCGAGTTTACAAAGGAATAGATAAACGAGTGAATA
AAGTAGCTATGTAGCAAGTTTATAAAGCAATAGATACACGAATGAATGAA
GCAGCAAAGTAGCGAGTTTATAAAGCAATAGATACACGAATGAATGAAGC
AGCAAAGTAGTGAGTTTATAAAGCAATAGATACACGAATGAATGAAGCAG
CAAAGTAGCGAGTTTATAAAGCAATAGATAAACGAGTGAATAAAGTAGCT
AAGTAGCAAGTTTATAAAGCAATAGATAAACGAATGAATAAAGTTGCGAG
TTTATAAAGCAATGCATTAAACGAGTGAATAAAGTAGCGAATTAGCAAGT
TGATAAAGCAGTAGATAAACAAATGAATGAAGCTATGTAGCAAGTTTATA
AAGCAATAGATACACGAATGAATGAAGTAGCAAAATATGTGTTTTCTTAA
AGTTTTTTAGCTTCGCATTTTTGAGTTAGGAAATCTTTTTGGGTCGCTAA
ACTTAAATTTCGCTATAATTCGAACCCTGCACTTAATGATTTATTTTTCT
CTTCTAGATCATCTGTGACTACATAACGCAGAAGAAAATTGGTAAGTCTC
CCTAAGTAACCCTCTTAGAGCAACATCCTGAAAAAAATCCTTAAACACGG
TGTAGTCTTAACTTAAGTAACTTCTATTGATATTATAAGTGCAATTTTGT
ATTGTGTTATTTTCATTGGTATTTGCATGTTTTTTTTTCAGGTCCCCTGA
ATCTACCTACTTGGATTGTTTTGTCACCCATCTACATTTGGGGATTGGTA
TTTTTCACAAGACCTCATAAGGTATCTCCTTTTTAGCTCAATTAGTTGAG
TAATATATGTGTCCCAATGGTGTTTTTACCTGAAAATCAGACCGGTCTTA
GACAATCTTTTAAAAGAGCTGGTAAATTACTGGTAAAAATAGTATTAGTA
CCAAAAGGCCACTACTAGAAAGTCCAGTTAATTTAGCAGCTATTTTGAAA
GGTCCGACTCCAGACCAGCCTTTATCGCCCTGTTATAACAATATTGTTAT
GTAATCTTAAATAACAAACACTTACAAACAGCCTAATGATTGGCCATGGT
CGGTCAAACGAGCAGCTGTGATCTACAAGCAACTAGGACTGTTCGAAATT
AGATTTTCTGGAAGGTTCTGAAGGCTGATCTAAAACAAAAATTTGATGCT
ACTAGACCGCTTGTTATACTGCACAGGCCAGGCCAATTCTTTGGTACTTT
AGATTGCTTGGGGAGTTACAAATTAATAAACCTCAAAAAAAGACAAATGT
GTGAAGTGTCACCAAAGAATCTTTAAAGTATGATGGCTGTGAAAAGAGAA
AATATATTATTGTATTTTTGTAGGAGGAGAGATTTCTGTTTCCAATTTAC
CCTTTGGTCATCTTCAGTGCAGTTTTCGCTTTGTCAAAAATACAGGTAGG
AGAATGCTTTTTTTCATGTTTATATATTTCAACGCTTTGTACAATGAACT
AATATGCAGCAAAGCATTTCTTTCCAGTCATAAAATTTTAAATCACTGAC
TCTTTTTTATAGGAATTATATCATCATTTGTTGAGTGCAAAAAATAAGCT
TCAACACTATTCTGATAGCTCAAATTGGCTTGCAATATTTGTTTTTATGG
TTTACACAATATTTTCATTGTCAAGATCTTCTGCACTTTATATTGGTGAG
TGTTAAAATTCAAAAACAGATGAAATTTATATCACATATTCTACAATATA
GTATGGGGCAAACGCTTAGGTCCTGGGACATCTTTTACCTTAAGGGAAGA
AATTTTTGCAGAATTTGATTTTCGTGGTTCACAGCTCAAAATTCAGAAGT
TTTGCAAAATTTATTGGCTGTGGAGAGGAATTTTTGTTTAAAATATGGCT
TATTTTGGCCCAAAAAACACCAATTCTATAGGTGATTTTTTAAATCATGA
GGATATTCTTGTTTCGTGGAATTTAATTTAAAAAATTTCTACCCTTAAGG
TTTGCGGCGCAACCAAACCTGGTCCATTTCAAAGAATGAAGTAGAAGAGT
TTTTCATGAGGAGGGTTTTTTGCTAAGGCCTAGGAAATTTTTTTGCGACT
CAAAAACTGGAAAAGTTTAATTTAATTTTTCCCATTTTGTTAGGTTATCA
TGCTCCTCTGGATGTTTATCCAGAACTAACAAACCTGGTGACTCCTTATG
ACCCAGACACAAAACCAATGTTTCATTCTGAGAAAAAGATCAATGTGTGT
GTTGGCAGGGAATGGTATCGTTTTCCGAGCAGTTTCTTTCTTCCGGAAAA
GTAGGTTCACTATGCAATGTGTTTTTCAGGAATTACTGATTGTCTTATAT
CCAGGAATTTCCACTAATTCCCATGTTTAGAGTTTCCAGGAATTTCTTTA
AAATGTTCAATTCAATCAATAAAATCCTAAAGTAAAACCCATTTTACAAA
CAAAATTTGAAACTGTCAGTTTTGTTGAAACCTCATTTATATTCTCGATG
ATCTTGAGGTGACTTAATGTACTTCTTCTTCTTCAGCTGGGAGCTTCACT
TTGTTAAGTCTCAGTTTGCTGGTCAATTACCACAGCCATATCAACAAGGG
GCTGATGCAACCAAAATCATTCCACGTAACATGAATGATATGAATAGAGA
AGAGTTCAGTCGTTATGTAAGTAGAATTTATTCTTTTTAAATATGAGACC
CCCCCCAGCAGACCTTCAATTCACGTAATCACGCAAATTTTTTTCCCAAA
TTCACACATTCACACAATGTTTTTTTGCAATTCACGCAAAGCTTTCCGCT
TCACGCATTCACACCAACTGCAGGGGGCCTCTTTGATTTACAAAGATTAC
ATTTTAGATTAATGTTGAAAAGTGTCATCTGCTGATTGATCTTGATTTGC
CAACTGCAAGTGAACATGAGAAGAACTATTCCCAAATAAAGAACAAGTGG
CAAATTATATATTCAAAGAAATTTTTGGATGCATCAAGGTGTGATTTTCT
TCTTTACTTTTACTTTCATCCACTCATTCCCATGTAGAGTTTTACAGAAA
AAGTCAAGCAAATTATAAATTTAGTAGATATTTGTGATGTATGAAGGACA
TATTTTTCACTTCTGCTATTCCATCGCGCCGAATGGGGTTTCCTAATTTT
GACGTTCGAATCATAAACGTCAAAAAGACGGAGGTAAAACGTTCGAAATC
ACGTCAGAAATGGCGCGCGGGTCATATTTAACGATTTAACCCACTGTAAT
ATCACTTTTTTAGGTGTTTATAATCACTTTTAATTATGAAATGTATATAT
TTCTGAAAAATGCAATAATTTGTCTACCATTTGGTTTTTATTTGGACTCT
TAACTCCAAAGATTTGTGTACTACTACAGCCTCTGAACTTCACTGACTTT
TTTAACAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTA
GCTACAGTCTAGTGCCACTAGCGGTTATTGTTTTCAATTATTTATTTTAT
TTATTTATAAAACCAAATTTACTCTAATTTATTGCCCCTATTGTAAGTAT
TTTAGTTGCTATCAAAAAAAATTTGATTGGCGCAAAATAGAACGCGCGCG
AAAAAACAATGCAATGACTTCTTCTCTGAGATGACAAAAATCGCAACACC
AATTTGGTGCGATGCATAATTGTTATATTATCCTATAAACCTCTCGTACA
TTTCACTTGTAGGTCGCATCAGCTTTACAGAGCATTCTATGTACCATTTC
TATCAGAGAAACATTGCACTTTTGTTGACTACAATATATTAAGAAGAATC
AATATGACACCAAAGAGGAAAGCTTAGCATAACATAATAATAATATTCTG
CTGTTGTTGTTTGTGAGCTTGTTGAGTTGCTTCAATACTGGCTGTCATTG
AGCAATGATTTCTTAAAACAACATTGGCAAAGTACACTCCTACTTTGCCA
ATGTTGTTTTAAGAAATCATTGCCCAATGCTTTATATCAGTACTGTCTAA
AGAGCATTATTTTCACTCTCAGCTTTTGTATTAAATATTTTATCTTGTGT
CAGCCTATTTATAAACAAAATTAATCACGAGATAATTTTTATAGGATATT
TTGAATTTGGATATTTTCTAGCCCTTAAATTATGTATCAGGTTTTTGGAA
AATTTGTAGGAATCTATTTTATATATTTTATTAAAATTTCAAATAATATG
AACAAAAGATTGTTTGGTTGGTGGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032911XLOC_032911Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051994-exon-scaffold_208-1575043694:85332..85453TCONS_00051994-exon-scaffold_208-1575043694:85332..85453Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:85152..85170TCONS_00051994-exon-scaffold_208-1575043694:85152..85170Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:84537..84671TCONS_00051994-exon-scaffold_208-1575043694:84537..84671Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:84266..84336TCONS_00051994-exon-scaffold_208-1575043694:84266..84336Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:83875..83963TCONS_00051994-exon-scaffold_208-1575043694:83875..83963Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:82957..83030TCONS_00051994-exon-scaffold_208-1575043694:82957..83030Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:82640..82701TCONS_00051994-exon-scaffold_208-1575043694:82640..82701Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:82411..82498TCONS_00051994-exon-scaffold_208-1575043694:82411..82498Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:82118..82223TCONS_00051994-exon-scaffold_208-1575043694:82118..82223Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:80208..80296TCONS_00051994-exon-scaffold_208-1575043694:80208..80296Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:79313..79346TCONS_00051994-exon-scaffold_208-1575043694:79313..79346Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:79083..79162TCONS_00051994-exon-scaffold_208-1575043694:79083..79162Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:78459..78530TCONS_00051994-exon-scaffold_208-1575043694:78459..78530Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:78209..78341TCONS_00051994-exon-scaffold_208-1575043694:78209..78341Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:77604..77760TCONS_00051994-exon-scaffold_208-1575043694:77604..77760Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:77238..77367TCONS_00051994-exon-scaffold_208-1575043694:77238..77367Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:76916..77046TCONS_00051994-exon-scaffold_208-1575043694:76916..77046Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1575043694:74927..75441TCONS_00051994-exon-scaffold_208-1575043694:74927..75441Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:85332..85453TCONS_00051994-exon-scaffold_208-1510915933:85332..85453Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:85152..85170TCONS_00051994-exon-scaffold_208-1510915933:85152..85170Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:84537..84671TCONS_00051994-exon-scaffold_208-1510915933:84537..84671Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:84266..84336TCONS_00051994-exon-scaffold_208-1510915933:84266..84336Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:83875..83963TCONS_00051994-exon-scaffold_208-1510915933:83875..83963Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:82957..83030TCONS_00051994-exon-scaffold_208-1510915933:82957..83030Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:82640..82701TCONS_00051994-exon-scaffold_208-1510915933:82640..82701Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:82411..82498TCONS_00051994-exon-scaffold_208-1510915933:82411..82498Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:82118..82223TCONS_00051994-exon-scaffold_208-1510915933:82118..82223Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:80208..80296TCONS_00051994-exon-scaffold_208-1510915933:80208..80296Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:79313..79346TCONS_00051994-exon-scaffold_208-1510915933:79313..79346Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:79083..79162TCONS_00051994-exon-scaffold_208-1510915933:79083..79162Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:78459..78530TCONS_00051994-exon-scaffold_208-1510915933:78459..78530Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:78209..78341TCONS_00051994-exon-scaffold_208-1510915933:78209..78341Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:77604..77760TCONS_00051994-exon-scaffold_208-1510915933:77604..77760Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:77238..77367TCONS_00051994-exon-scaffold_208-1510915933:77238..77367Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:76916..77046TCONS_00051994-exon-scaffold_208-1510915933:76916..77046Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1510915933:74927..75441TCONS_00051994-exon-scaffold_208-1510915933:74927..75441Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:85332..85453TCONS_00051994-exon-scaffold_208-1491911889:85332..85453Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:85152..85170TCONS_00051994-exon-scaffold_208-1491911889:85152..85170Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:84537..84671TCONS_00051994-exon-scaffold_208-1491911889:84537..84671Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:84266..84336TCONS_00051994-exon-scaffold_208-1491911889:84266..84336Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:83875..83963TCONS_00051994-exon-scaffold_208-1491911889:83875..83963Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:82957..83030TCONS_00051994-exon-scaffold_208-1491911889:82957..83030Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:82640..82701TCONS_00051994-exon-scaffold_208-1491911889:82640..82701Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:82411..82498TCONS_00051994-exon-scaffold_208-1491911889:82411..82498Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:82118..82223TCONS_00051994-exon-scaffold_208-1491911889:82118..82223Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:80208..80296TCONS_00051994-exon-scaffold_208-1491911889:80208..80296Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:79313..79346TCONS_00051994-exon-scaffold_208-1491911889:79313..79346Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:79083..79162TCONS_00051994-exon-scaffold_208-1491911889:79083..79162Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:78459..78530TCONS_00051994-exon-scaffold_208-1491911889:78459..78530Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:78209..78341TCONS_00051994-exon-scaffold_208-1491911889:78209..78341Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:77604..77760TCONS_00051994-exon-scaffold_208-1491911889:77604..77760Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:77238..77367TCONS_00051994-exon-scaffold_208-1491911889:77238..77367Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:76916..77046TCONS_00051994-exon-scaffold_208-1491911889:76916..77046Clytia hemisphaericaexon
TCONS_00051994-exon-scaffold_208-1491911889:74927..75441TCONS_00051994-exon-scaffold_208-1491911889:74927..75441Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_208supercontigscaffold_208:74927..85453 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.3901	25.3664	25.1344	29.3343	14.7339	10.8388	7.37654	7.84733	3.30166	12.3218	10.7945	9.66725	10.9522	5.00279	9.89004	12.4624	13.4906	13.9641	6.67097	7.81279	14.4836	14.2051	26.2998	24.3383	0.0674283	10.6401	7.0006	5.79338	14.156	6.68521
Blast
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BLAST of TCONS_00051994 vs. Swiss-Prot (Human)
Match: ALG9 (Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens GN=ALG9 PE=1 SV=2)

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 290/565 (51.33%), Postives = 384/565 (67.96%), Query Frame = 1 
Query:   10 GIAESKCWCPRLSVVFNVLLSARITASFLSNISDCDETFNYWEPTHYLMYGSGFQTWEYSPEYAIRSYAYLYFYTMPAKIIKNLFLANKITVFYYVRFILGIICAACETYFFNSLLNQFGKHVARMYFLFAIINTGMFISSTAFLPSSFAMYSGLLAFGGWFDRNNAVAIFGIAIGTLLGWPFFAILGVPIAFDIIFRQGNLWKFILWSGAIFLAIMIPMVSLDSHYYGKQVIAPLNIFLYNVFGQGGPDLYGVESWTFYFINGFLNFNVTFIMALLSLPICIICDYITQK-KIGPLNLPTWIVLSPIYIWGLVFFTRPHKEERFLFPIYPLVIFSAVFALSKIQELYHHLLSAKNKLQHYSDSSNWLAIFVFMVYTIFSLSRSSALYIGYHAPLDVYPELTNLVTPYDPDTKPMFHSEKKINVCVGREWYRFPSSFFLPENWELHFVKSQFAGQLPQPYQQGADATKIIPRNMNDMNREEFSRYINVEKCHLLIDLDLPTASEHEKNYSQIKNKWQIIYSKKFLDASRSHQLYRAFYVPFLSEKHCTFVDYNILRRINMTPKRK 1701
            G    + W P  S  F  LLSAR+ A+ LSNISDCDETFNYWEPTHYL+YG GFQTWEYSP YAIRSYAYL  +  PA     +   NKI VFY++R +L  +   CE YF+ ++  +FG HV+RM   F +++TGMF SS+AFLPSSF MY+ L+A  GW+    ++A+ G+A G +LGWPF A LG+PIAFD++  +     F  WS    +  ++P+V +DS+YYGK VIAPLNI LYNVF   GPDLYG E W FY INGFLNFNV F +ALL LP+  + +Y+ Q+  +  L  P W+ L+P+YIW ++FF +PHKEERFLFP+YPL+      ALS +Q+ YH +   + +L+HY+ +SNWLA+    ++ + S SRS AL+ GYH PLD+YPE   + T     T P     + +NVCVG+EWYRFPSSF LP+NW+L F+ S+F GQLP+P+ +G  AT+I+P +MND N EE SRYI++ KCH L+DLD    +  E  YS  K +W  +  + FLDASRS +L RAFYVPFLS+++  +V+Y IL+       RK
Sbjct:   47 GNKAGQVWAPEGSTAFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQ-RYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVP---EGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRK 607
The following BLAST results are available for this feature:
BLAST of TCONS_00051994 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALG90.000e+051.33Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens... [more]
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