TCONS_00051995 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051995
Unique NameTCONS_00051995
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051995 ID=TCONS_00051995|Name=TCONS_00051995|organism=Clytia hemisphaerica|type=transcript|length=2108bp
tTCTAGTGTTGGCATTGCTGAAAGTAAATGTTGGTGTCCAAGACTGTCAG
TTGTGTTCAATGTTCTTCTCTCTGCAAGAATCACAGCATCATTCTTGAGT
AACATATCTGACTGCGATGAAACATTCAATTATTGGGAACCAACACATTA
CCTGATGTATGGATCTGGCTTTCAAACCTGGGAGTATTCTCCAGAATATG
CAATCAGGTCTTATGCCTACCTGTACTTCTATACCATGCCAGCAAAGATT
ATCAAAAATCTATTTCTGGCAAATAAGATAACTGTCTTTTATTATGTTCG
GTTTATCCTTGGAATTATATGTGCAGCTTGCGAAACATACTTTTTCAACT
CACTTTTGAATCAATTTGGAAAACACGTTGCAAgaatgtattttcttttt
gcCATAATCAATACTGGAATGTTTATATCTTCAACAGCTTTTCTACCAAG
CTCATTTGCTATGTATTCAGGCTTGCTTGCTTTTGGTGGATGGTTTGATA
GAAACAATGCTgtAGCAATATTTGGTATTGCCATAGGAACCCTACTTGGT
TGGCCTTTTTTTGCCATTCTTGGgGTTCCCATTGCATTTGATATCATTTT
TCGTCAAGGTAACCTgtggaagttcattctatggtctGGTGCAATCTTCC
TTGCCATTATGATTCCTATGGTTTCTCTCGACAGCCACTACTATGGAAAA
CAAGTGATAGCTCCACTAAACATTTTCCTGTACAATGTTTTTGGACAAGG
AGGGCCAGATCTTTATGGTGTAGAATCTTGgacattttatttcataaatg
GGTTTTTAAACTTCAATGTCACCTTCATTATGGCTTTGCTCTCCCTTCCA
ATATGTATCATCTGTGACTACATAACGCAGAAGAAAATTGgtccCCTGAA
TCTACCTACTTGGATTGTTTTGTCACCCATCTACATTTGGGGATTGGTAT
TTTTCACAAGACCTCATAAGGAGGAGAGATTTCTGTTTCCAATTTACCCT
TTGGTCATCTTCAGTGCAGTTTTCGCTTTGTCAAAAATACAGGAATTATA
TCATCATTTGTTGAGTGCAAAAAATAAGCTTCAACACTATTCTGATAGCT
CAAATTGGCTTgcaatatttgtttttatgGTTTACACAATATTTTCATTG
TCAAGATCTTCTGCACTTTATATTGGTTATCATGCTCCTCTGGATGTTTA
TCCAGAACTAACAAACCTGGTGACTCCTTATGACCCAGACACAAAACCAA
TGTTTCATTCTGAGAAAAAGATCAATGTGTGTGTTGGCAGGGAATGGTAT
CGTTTTCCGAGCAGTTTCTTTCTTCCGGAAAActGGGAGCTTCACTTTGT
TAAGTCTCAGTTTGCTGGTCAATTACCACAGCCATATCAACAAGGGGCTG
ATGCAACCAAAATCATTCCACGTAACATGAATGATATGAATAGAGAAGAG
TTCAGTCGTTATattaatgttgaaaagtgTCATCTGCTGATTGATCTTGA
TTTGCCAACTGCAAGTGAACATGAGAAGAACTATTCCCAAATAAAGAACA
AGTGGCAAATTAtatattcaaagaaatttttggaTGCATCAAGGTCGCAT
CAGCTTTACAGAGCATTCTATGTACCATTTCTATCAGAGAAACATTGCac
ttttgttgactacaatatATTAAGAAGAATCAATATGACACCAAAGAGGA
AAGCTTAGCATAACATAATAATAATATTCTGCTGTTGTTGTTTGTGAGCT
TGTTGAGTTGCTTCAATACTGGCTGTCATTGAGCAATGATTTCTTAAAAC
AACATTGGCAAAGTACACTCCTACTTTGCCAATGTTGTTTTAAGAAATCA
TTGCCCAATGCTTTATATCAGTACTGTCTAAAGAGCATTATTTTCACTCT
CAGCTTTTGTATTAAATATTTTATCTTGTGTCAGCctatttataaacaaa
attaaTCACGAGATAATTTTTATAGGATATtttgaatttggatattttct
agCCCTTAAATTATGTATCaggtttttggaaaatttgtaggaatctattt
tatatattttattaaaatttcaaataatatgAACAAAAGATTGTTTGGTT
GGTGGGTT
Run BLAST on NCBI

transcript from alignment at scaffold_208:74927..85454-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051995 ID=TCONS_00051995|Name=TCONS_00051995|organism=Clytia hemisphaerica|type=transcript|length=10528bp|location=Sequence derived from alignment at scaffold_208:74927..85454- (Clytia hemisphaerica)
TTCTAGTGTTGGCATTGCTGAAAGTAAATGTTGGTGTCCAAGACTGTCAG
TTGTGTTCAATGTTCTTCTCTCTGCAAGAATCACAGCATCATTCTTGAGT
AACATATCTGACTGCGATGAAACATTCAATTATTGGGAACCAGTAAGACA
TGATTTTCCTAGTTTCTTAACCTTCAGACACTTANTAAATGTTGGTGTCC
AAGACTGTCAGTTGTGTTCAATGTTCTTCTCTCTGCAAGAATCACAGCAT
CATTCTTGAGTAACATATCTGACTGCGATGAAACATTCAATTATTGGGAA
CCAGTAAGACATGATTTTCCTAGTTTCTTAACCTTCAGACCCTTAGGATG
ATGAAAATTAGTTTCTTTTATATGGAATTCCTATCAAAACTTTTTAAGAG
AATTTAGTCCTAGGGCCCCGTTTTCATCAGTTTTTATTTGACGTTGCATC
AATAAGAGATGTTGAAGTGCTCTCCGAGAAATTTTTTAAAAACCTCCAAA
GATGAATAATGAAGGGAAATCACAAGAAAGAAAAAATCAAAGAACAACGA
TAAATTTTTAACGTTTTCGAGCACTTTCTGAAAGCAACTTTTTTATCCAA
TTGAGCATAACTTTTGATCCAATGAATCAAATTTAATAAATGACCCATCA
AAATTTAAGTCTTATCTGTTTTTCTCCAATGAAATAGGAATTGTTCTTTT
AGATTTCAAGAAAATTAGTTTTAAAGAGGGAAACTTTTTTGTGGCGCACC
CGGTATTATTAACCTTAATCGTTATCTTTATAGACACATTACCTGATGTA
TGGATCTGGCTTTCAAACCTGGGAGTATTCTCCAGAATATGCAATCAGGT
CTTATGCCTACCTGTACTTCTATACCATGCCAGCAAAGATTATCAAAAAT
CTATTTCTGGCAAATAAGGTAAGTTTCAACCTCGAGAAAAGTCTTTAAAC
TAAAAGTCTTTAATAATAAAATCAGATAAAACCATGTTATAAATGAACAT
GGATGCGGTTTTTTTATCCTTCTGAATGGCTTAACTAAATTCAAATTTTT
TTCTTGTAGTCTAGAGAGTTTGATAAAATTCTTTGGATTTCTTTGAGAAT
TTTCATTTTTCCTCTTAGATAACTGTCTTTTATTATGTTCGGTTTATCCT
TGGAATTATATGTGCAGCTTGCGAAACATACTTTTTCAAGTAAGTCTGAC
TTTGATTAGATACATAAAAGTTTTCTAGAAGGTCAAAGCTTTCGTTATTT
TTATTATATTATTAATACTTTTATCTCTGAGAACAATTTTGTTGAACTGG
TACTTTGCTGTTGTATTTTATTAAAATTAATTGGAAATATCATAAATGGC
TTTCAGCAACGCCAACACTTCATGCAATTGTTTTGAATAAAAGTTATATT
TTCTGTTAAATTTAAGGTATCTTTAGTGTGGTACGAACTCTGACTATTTT
AAAGAAAAAATATTTATGATTTATTAAATCGTATTTTGCAGCTCACTTTT
GAATCAATTTGGAAAACACGTTGCAAGAATGTATTTTCTTTTTGCCATAA
TCAATACTGGAATGTTTATATCTTCAACAGGTATTTTTAAAAGCTTGTCC
CACTATTTTTCCAACAACATTGATTTGCTTCATTTTTCATTAGCTTGCCA
TATTTTCTCAATTAAGGGCTACTCTCTAATAAGTGCCTATGCTCTAAACC
CTGAGTTTTGAAACAACAATTGTGTAATCACAAGCGATCTGAAGTACAAA
TGAAATGGTGCATTCTTGAAATGTTCTTGAACTAGCGTCTGAGAATGTTC
CAGAACGCTCAAGAATGTTCGCTCGAAAACTCAATAAGAACGTTTGTGAA
CGCTTTGGAACATTCAGAAATGGTTGTTAACCTTCTTCTTCTTGAATGTT
CTAAGACATTCTTAAAAGGGAATGATCGAGAACATTCAAGAACGTACTCT
AGCGTTCTTGGAAATAGATATGTTCCATATTTTTCCTCTAATTTAACTGG
ATCGTTCCATTCTTTTTGTAATCTTTACAATTTTCACGGAATTTAATTTC
GTTATTTTTACAGTAAATCTGCGACATTAAATTCTGCAAGATTAAATTCT
GCGATACATGAATATTCTCATGATTTATAAAAACGGCTAAAAATTGGTCT
TTTTAGGGCAAAATAGGCCATAATTTAAACAAAAAATCCTCTTAACGGCA
AAATTAAATTTTGTGACAATTTCTTTCTGCTGAAATTTCTTTCCTTAAGG
TAATAAACGTTGCACCAGGCTGCCCCTTAAAATTACAGAAGTTGAATAAG
TGAATAAGCGCCCAGCCCTTATCTGAGGAAATAAAGCCTATCCTATTTAT
GTTATTGGAATTTATCTCAATATATAGTTGTTGTTGACTTTGAATAAAGT
TTGAACTTTTAAAATTCTTTTTAGCTTTTCTACCAAGCTCATTTGCTATG
TATTCAGGCTTGCTTGCTTTTGGTGGATGGTTTGATAGAAACAATGCTGT
GAGTTATCCATTCTCAATGTAGCCATTTTTTAATAACTTCTATTTTTTAT
ACAACCTAACGACCTAAAGAAAATACACTTGGTTTTAAAAATGAATAGTA
ATGTACTGTTAAAACTTTCTGTTGAATTAAGCATCCTCGACAAACAGACA
GGCTTCTTTGAAGGGTCTTCCTGCATAATTAACTTAAAAAAAAGGGTTGA
CCTTGGCAACAAAAACATGTTTGAATAAGGCTCATTTCATATTTTTCTTT
CAGGTAGCAATATTTGGTATTGCCATAGGAACCCTACTTGGTTGGCCTTT
TTTTGCCATTCTTGGGTATGAAACGGGTCTAAATTTGATCCTTTTTACTT
TTCAAAATACTTCACATAAAAGCACAATTTATGTTTTAGATTTTTATTTT
TTTCCATTTCTGTCACTGTGTAGAAGGTTGAATATTCTTTTTTCTTTGTA
TTTTAGGGTTCCCATTGCATTTGATATCATTTTTCGTCAAGGTAACCTGT
GGAAGTTCATTCTATGGTCTGGTGCAATCTTCCTTGCCATTATGGTACGA
TTTGATAACATTCTTTTGTACCCACTATCTACTGGATACGTTAATAAAAG
TTTGAATTATTTTTAATGTTTTCTCTATGTTGTCCAGATCAGTAAAAATT
ATCTAGAGTAAATTTTCAAGTCAAAAATTTCTTAGAATTTAATCAAATTT
TAGCTCTTATTTCTCTGCCTCTTCTTTCTAGATTCCTATGGTTTCTCTCG
ACAGCCACTACTATGGAAAACAAGTGATAGCTCCACTAAACATTTTCCTG
TACAATGTTTTTGGACAAGGAGGGCCAGATCTTTATGGTAATAAATTTTA
CGCATTATTACAACCTTACACAGCCCTTGAAATTCAAGTAAAAGTAAGTC
GGCACGTAAGTGCCGTCCAAATCCGGCCGAAGGCCGGCAAAATTTTGCCG
ACCTAAGCTTGTTTTTAGGTCGGCAATGCCGATCTGAGCTATATTTTAGG
TCGGCAAAGTTGTTTAAAGGCTACGGCAATGGGGAGAAGACAAACCGTGG
ACCCCCGATATGGACCCCCAATATGGACCCCCTCAAAAACGGCAAGAAAT
ACCAAAAACAGCTCTGAACAACTCTAGTTTGAAATAATTTATGTCTATTT
GCACTTCCAATATCACATTGAGTACGATAAGTCTTTTTTAAGATTTATTC
CGAGTTATTCCGAGTTATTCGAACTTAACATTCTGCTGAGTTTGATCTTT
TACTTGAGCTGCTCTGCTCAGTCCAAACAAATATGGATATACTCAAGAAC
AATGTTTTTTGGCTTAACAAACCATAGATTGAGACATGAGTTACAACTCA
AATAACCCGAACTTTCATAATATTACCCATATTGTTTGCCTCTGAAAAAA
GATTTCGTGGATGATGATACCTACAAAAAGTCCCTCCTATGATAATAAAC
TTTTATTTTCTAGAGGAAGTTATACTAGCAACTCGAACACTCCTAAATGT
AACTTTTCAATGTAACTCGGGCCTCATGTGCCATCTGAGAGAGCTCATTA
GCTTCTGACTGACGTCATTTTATATCCGCTTACACTACCAGCATCACATT
GGGTATAGTTCTATTATTTTGTGATTTTGTCTTAACAGANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTAAAACAACCCTCTCTGAGAAGTCACAAGCTTCTGATTGGTGTCTTTT
TATATCCATTCACACTATCTACATCACTTTCGGTATAATAAATATTTTGA
ATGTGTTTGTCTTAAGAGACGTCATATTTTAAGATTCTGTCAATATTTTT
CTCAAATATCAACATTGTGTCAACATTTCAACAATAGAACAAATCACCCT
GAACGAACTGAATTTATGTCTAAATAACAGAATGTAACATGTAACTCTAT
AACTGTTGTAATATGTTTATATTATCTAGGACGACTATAATATAGCACAA
ATAACTACCTATTTAATGTTGGGAAATACCCACAATGCTTTTCTCGCCAT
TTAAAGGGGGTCCTCCATTAGGGGTCCATATTGGTGGTCCATATTGGGGT
CCATATTGGGGGTCCATATCAGGGGTCCACGGTTTGTCTTCTCCCTACGG
CAATGTTTGTTTTTTTATTTGAGTGCGATATGGTTCTTATTAGAGACTTT
CTCTTTTAATACTTTTTGCTGTTAAGGTCGGCTTTGCTGACCTAAAAGAT
AACTTATGGTCGGCTGCCGAGAGAATCAATGAATATGGTCGGCAATGAAC
TGCCGACCATACGCACTCTTTGGTCGGCTTTTAGGTCGGCACTGCCGAAT
GCCGACCTGAAATTCGAGGGCTGCTTACATGTCCCTTGGCTTTGATGGGC
TAATGACTTATTTTAAATTGAATCTTGTCTTTACATCTGTAAGAAAGACG
TAATTTCTTTTATCAACATTACTTTTGTTTTAGAATTTTTACCATATTTC
TATTTTAGGTGTAGAATCTTGGACATTTTATTTCATAAATGGGTTTTTAA
ACTTCAATGTCACCTTCATTATGGCTTTGCTCTCCCTTCCAATATGTGTA
AGTCCAGTTTGTTCATTAAAACTGAAGTTAATTTAGTTTTAGCCAATCCG
CCTTATCTCATAAATCCATGTTTAGGAAGATTTTTTCACCGTTTGCGAAG
CATTTTTAGTATTTTGCAATGTTGTTTGAAAGAAAGTGCAAAAGTATCTT
CAATGCATTTCTCTAGAAAAGCGAAGTAAGACTTAGGCTGTTGTGTGAGA
TTGTAGACAAAGCTAAGTTAGTGAGTTTCTAAAACAATAGACAGATAAAT
TAAGAAAGTTTTGAAGTAGCGAGTTTATAAAGCAATAGATAAACGAATGA
ATGAAGCAGCGAAGTAGCGAGTTTACAAAGGAATAGATAAACGAGTGAAT
AAAGTAGCTATGTAGCAAGTTTATAAAGCAATAGATACACGAATGAATGA
AGCAGCAAAGTAGCGAGTTTATAAAGCAATAGATACACGAATGAATGAAG
CAGCAAAGTAGTGAGTTTATAAAGCAATAGATACACGAATGAATGAAGCA
GCAAAGTAGCGAGTTTATAAAGCAATAGATAAACGAGTGAATAAAGTAGC
TAAGTAGCAAGTTTATAAAGCAATAGATAAACGAATGAATAAAGTTGCGA
GTTTATAAAGCAATGCATTAAACGAGTGAATAAAGTAGCGAATTAGCAAG
TTGATAAAGCAGTAGATAAACAAATGAATGAAGCTATGTAGCAAGTTTAT
AAAGCAATAGATACACGAATGAATGAAGTAGCAAAATATGTGTTTTCTTA
AAGTTTTTTAGCTTCGCATTTTTGAGTTAGGAAATCTTTTTGGGTCGCTA
AACTTAAATTTCGCTATAATTCGAACCCTGCACTTAATGATTTATTTTTC
TCTTCTAGATCATCTGTGACTACATAACGCAGAAGAAAATTGGTAAGTCT
CCCTAAGTAACCCTCTTAGAGCAACATCCTGAAAAAAATCCTTAAACACG
GTGTAGTCTTAACTTAAGTAACTTCTATTGATATTATAAGTGCAATTTTG
TATTGTGTTATTTTCATTGGTATTTGCATGTTTTTTTTTCAGGTCCCCTG
AATCTACCTACTTGGATTGTTTTGTCACCCATCTACATTTGGGGATTGGT
ATTTTTCACAAGACCTCATAAGGTATCTCCTTTTTAGCTCAATTAGTTGA
GTAATATATGTGTCCCAATGGTGTTTTTACCTGAAAATCAGACCGGTCTT
AGACAATCTTTTAAAAGAGCTGGTAAATTACTGGTAAAAATAGTATTAGT
ACCAAAAGGCCACTACTAGAAAGTCCAGTTAATTTAGCAGCTATTTTGAA
AGGTCCGACTCCAGACCAGCCTTTATCGCCCTGTTATAACAATATTGTTA
TGTAATCTTAAATAACAAACACTTACAAACAGCCTAATGATTGGCCATGG
TCGGTCAAACGAGCAGCTGTGATCTACAAGCAACTAGGACTGTTCGAAAT
TAGATTTTCTGGAAGGTTCTGAAGGCTGATCTAAAACAAAAATTTGATGC
TACTAGACCGCTTGTTATACTGCACAGGCCAGGCCAATTCTTTGGTACTT
TAGATTGCTTGGGGAGTTACAAATTAATAAACCTCAAAAAAAGACAAATG
TGTGAAGTGTCACCAAAGAATCTTTAAAGTATGATGGCTGTGAAAAGAGA
AAATATATTATTGTATTTTTGTAGGAGGAGAGATTTCTGTTTCCAATTTA
CCCTTTGGTCATCTTCAGTGCAGTTTTCGCTTTGTCAAAAATACAGGTAG
GAGAATGCTTTTTTTCATGTTTATATATTTCAACGCTTTGTACAATGAAC
TAATATGCAGCAAAGCATTTCTTTCCAGTCATAAAATTTTAAATCACTGA
CTCTTTTTTATAGGAATTATATCATCATTTGTTGAGTGCAAAAAATAAGC
TTCAACACTATTCTGATAGCTCAAATTGGCTTGCAATATTTGTTTTTATG
GTTTACACAATATTTTCATTGTCAAGATCTTCTGCACTTTATATTGGTGA
GTGTTAAAATTCAAAAACAGATGAAATTTATATCACATATTCTACAATAT
AGTATGGGGCAAACGCTTAGGTCCTGGGACATCTTTTACCTTAAGGGAAG
AAATTTTTGCAGAATTTGATTTTCGTGGTTCACAGCTCAAAATTCAGAAG
TTTTGCAAAATTTATTGGCTGTGGAGAGGAATTTTTGTTTAAAATATGGC
TTATTTTGGCCCAAAAAACACCAATTCTATAGGTGATTTTTTAAATCATG
AGGATATTCTTGTTTCGTGGAATTTAATTTAAAAAATTTCTACCCTTAAG
GTTTGCGGCGCAACCAAACCTGGTCCATTTCAAAGAATGAAGTAGAAGAG
TTTTTCATGAGGAGGGTTTTTTGCTAAGGCCTAGGAAATTTTTTTGCGAC
TCAAAAACTGGAAAAGTTTAATTTAATTTTTCCCATTTTGTTAGGTTATC
ATGCTCCTCTGGATGTTTATCCAGAACTAACAAACCTGGTGACTCCTTAT
GACCCAGACACAAAACCAATGTTTCATTCTGAGAAAAAGATCAATGTGTG
TGTTGGCAGGGAATGGTATCGTTTTCCGAGCAGTTTCTTTCTTCCGGAAA
AGTAGGTTCACTATGCAATGTGTTTTTCAGGAATTACTGATTGTCTTATA
TCCAGGAATTTCCACTAATTCCCATGTTTAGAGTTTCCAGGAATTTCTTT
AAAATGTTCAATTCAATCAATAAAATCCTAAAGTAAAACCCATTTTACAA
ACAAAATTTGAAACTGTCAGTTTTGTTGAAACCTCATTTATATTCTCGAT
GATCTTGAGGTGACTTAATGTACTTCTTCTTCTTCAGCTGGGAGCTTCAC
TTTGTTAAGTCTCAGTTTGCTGGTCAATTACCACAGCCATATCAACAAGG
GGCTGATGCAACCAAAATCATTCCACGTAACATGAATGATATGAATAGAG
AAGAGTTCAGTCGTTATGTAAGTAGAATTTATTCTTTTTAAATATGAGAC
CCCCCCCAGCAGACCTTCAATTCACGTAATCACGCAAATTTTTTTCCCAA
ATTCACACATTCACACAATGTTTTTTTGCAATTCACGCAAAGCTTTCCGC
TTCACGCATTCACACCAACTGCAGGGGGCCTCTTTGATTTACAAAGATTA
CATTTTAGATTAATGTTGAAAAGTGTCATCTGCTGATTGATCTTGATTTG
CCAACTGCAAGTGAACATGAGAAGAACTATTCCCAAATAAAGAACAAGTG
GCAAATTATATATTCAAAGAAATTTTTGGATGCATCAAGGTGTGATTTTC
TTCTTTACTTTTACTTTCATCCACTCATTCCCATGTAGAGTTTTACAGAA
AAAGTCAAGCAAATTATAAATTTAGTAGATATTTGTGATGTATGAAGGAC
ATATTTTTCACTTCTGCTATTCCATCGCGCCGAATGGGGTTTCCTAATTT
TGACGTTCGAATCATAAACGTCAAAAAGACGGAGGTAAAACGTTCGAAAT
CACGTCAGAAATGGCGCGCGGGTCATATTTAACGATTTAACCCACTGTAA
TATCACTTTTTTAGGTGTTTATAATCACTTTTAATTATGAAATGTATATA
TTTCTGAAAAATGCAATAATTTGTCTACCATTTGGTTTTTATTTGGACTC
TTAACTCCAAAGATTTGTGTACTACTACAGCCTCTGAACTTCACTGACTT
TTTTAACAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCT
AGCTACAGTCTAGTGCCACTAGCGGTTATTGTTTTCAATTATTTATTTTA
TTTATTTATAAAACCAAATTTACTCTAATTTATTGCCCCTATTGTAAGTA
TTTTAGTTGCTATCAAAAAAAATTTGATTGGCGCAAAATAGAACGCGCGC
GAAAAAACAATGCAATGACTTCTTCTCTGAGATGACAAAAATCGCAACAC
CAATTTGGTGCGATGCATAATTGTTATATTATCCTATAAACCTCTCGTAC
ATTTCACTTGTAGGTCGCATCAGCTTTACAGAGCATTCTATGTACCATTT
CTATCAGAGAAACATTGCACTTTTGTTGACTACAATATATTAAGAAGAAT
CAATATGACACCAAAGAGGAAAGCTTAGCATAACATAATAATAATATTCT
GCTGTTGTTGTTTGTGAGCTTGTTGAGTTGCTTCAATACTGGCTGTCATT
GAGCAATGATTTCTTAAAACAACATTGGCAAAGTACACTCCTACTTTGCC
AATGTTGTTTTAAGAAATCATTGCCCAATGCTTTATATCAGTACTGTCTA
AAGAGCATTATTTTCACTCTCAGCTTTTGTATTAAATATTTTATCTTGTG
TCAGCCTATTTATAAACAAAATTAATCACGAGATAATTTTTATAGGATAT
TTTGAATTTGGATATTTTCTAGCCCTTAAATTATGTATCAGGTTTTTGGA
AAATTTGTAGGAATCTATTTTATATATTTTATTAAAATTTCAAATAATAT
GAACAAAAGATTGTTTGGTTGGTGGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032911XLOC_032911Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051995-exon-scaffold_208-1575043694:85313..85454TCONS_00051995-exon-scaffold_208-1575043694:85313..85454Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:84537..84671TCONS_00051995-exon-scaffold_208-1575043694:84537..84671Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:84266..84336TCONS_00051995-exon-scaffold_208-1575043694:84266..84336Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:83875..83963TCONS_00051995-exon-scaffold_208-1575043694:83875..83963Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:82957..83030TCONS_00051995-exon-scaffold_208-1575043694:82957..83030Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:82640..82701TCONS_00051995-exon-scaffold_208-1575043694:82640..82701Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:82411..82498TCONS_00051995-exon-scaffold_208-1575043694:82411..82498Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:82118..82223TCONS_00051995-exon-scaffold_208-1575043694:82118..82223Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:80208..80296TCONS_00051995-exon-scaffold_208-1575043694:80208..80296Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:79313..79346TCONS_00051995-exon-scaffold_208-1575043694:79313..79346Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:79083..79162TCONS_00051995-exon-scaffold_208-1575043694:79083..79162Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:78459..78530TCONS_00051995-exon-scaffold_208-1575043694:78459..78530Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:78209..78341TCONS_00051995-exon-scaffold_208-1575043694:78209..78341Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:77604..77760TCONS_00051995-exon-scaffold_208-1575043694:77604..77760Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:77238..77367TCONS_00051995-exon-scaffold_208-1575043694:77238..77367Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:76916..77046TCONS_00051995-exon-scaffold_208-1575043694:76916..77046Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1575043694:74927..75441TCONS_00051995-exon-scaffold_208-1575043694:74927..75441Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:85313..85454TCONS_00051995-exon-scaffold_208-1510915933:85313..85454Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:84537..84671TCONS_00051995-exon-scaffold_208-1510915933:84537..84671Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:84266..84336TCONS_00051995-exon-scaffold_208-1510915933:84266..84336Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:83875..83963TCONS_00051995-exon-scaffold_208-1510915933:83875..83963Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:82957..83030TCONS_00051995-exon-scaffold_208-1510915933:82957..83030Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:82640..82701TCONS_00051995-exon-scaffold_208-1510915933:82640..82701Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:82411..82498TCONS_00051995-exon-scaffold_208-1510915933:82411..82498Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:82118..82223TCONS_00051995-exon-scaffold_208-1510915933:82118..82223Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:80208..80296TCONS_00051995-exon-scaffold_208-1510915933:80208..80296Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:79313..79346TCONS_00051995-exon-scaffold_208-1510915933:79313..79346Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:79083..79162TCONS_00051995-exon-scaffold_208-1510915933:79083..79162Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:78459..78530TCONS_00051995-exon-scaffold_208-1510915933:78459..78530Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:78209..78341TCONS_00051995-exon-scaffold_208-1510915933:78209..78341Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:77604..77760TCONS_00051995-exon-scaffold_208-1510915933:77604..77760Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:77238..77367TCONS_00051995-exon-scaffold_208-1510915933:77238..77367Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:76916..77046TCONS_00051995-exon-scaffold_208-1510915933:76916..77046Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1510915933:74927..75441TCONS_00051995-exon-scaffold_208-1510915933:74927..75441Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:85313..85454TCONS_00051995-exon-scaffold_208-1491911889:85313..85454Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:84537..84671TCONS_00051995-exon-scaffold_208-1491911889:84537..84671Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:84266..84336TCONS_00051995-exon-scaffold_208-1491911889:84266..84336Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:83875..83963TCONS_00051995-exon-scaffold_208-1491911889:83875..83963Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:82957..83030TCONS_00051995-exon-scaffold_208-1491911889:82957..83030Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:82640..82701TCONS_00051995-exon-scaffold_208-1491911889:82640..82701Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:82411..82498TCONS_00051995-exon-scaffold_208-1491911889:82411..82498Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:82118..82223TCONS_00051995-exon-scaffold_208-1491911889:82118..82223Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:80208..80296TCONS_00051995-exon-scaffold_208-1491911889:80208..80296Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:79313..79346TCONS_00051995-exon-scaffold_208-1491911889:79313..79346Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:79083..79162TCONS_00051995-exon-scaffold_208-1491911889:79083..79162Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:78459..78530TCONS_00051995-exon-scaffold_208-1491911889:78459..78530Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:78209..78341TCONS_00051995-exon-scaffold_208-1491911889:78209..78341Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:77604..77760TCONS_00051995-exon-scaffold_208-1491911889:77604..77760Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:77238..77367TCONS_00051995-exon-scaffold_208-1491911889:77238..77367Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:76916..77046TCONS_00051995-exon-scaffold_208-1491911889:76916..77046Clytia hemisphaericaexon
TCONS_00051995-exon-scaffold_208-1491911889:74927..75441TCONS_00051995-exon-scaffold_208-1491911889:74927..75441Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_208supercontigscaffold_208:74927..85454 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.738	13.0213	25.6972	25.9427	7.83501	5.54919	18.8574	19.3474	23.3281	6.6287	5.79179	4.97555	5.30556	12.4131	4.66158	5.88334	6.74862	6.67261	3.48627	3.85517	6.97573	7.26118	13.0185	11.2918	21.0669	5.35078	3.40024	2.93654	21.1165	30.8124
Blast
[Close]
BLAST of TCONS_00051995 vs. Swiss-Prot (Human)
Match: ALG9 (Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens GN=ALG9 PE=1 SV=2)

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 290/565 (51.33%), Postives = 384/565 (67.96%), Query Frame = 2 
Query:   11 GIAESKCWCPRLSVVFNVLLSARITASFLSNISDCDETFNYWEPTHYLMYGSGFQTWEYSPEYAIRSYAYLYFYTMPAKIIKNLFLANKITVFYYVRFILGIICAACETYFFNSLLNQFGKHVARMYFLFAIINTGMFISSTAFLPSSFAMYSGLLAFGGWFDRNNAVAIFGIAIGTLLGWPFFAILGVPIAFDIIFRQGNLWKFILWSGAIFLAIMIPMVSLDSHYYGKQVIAPLNIFLYNVFGQGGPDLYGVESWTFYFINGFLNFNVTFIMALLSLPICIICDYITQK-KIGPLNLPTWIVLSPIYIWGLVFFTRPHKEERFLFPIYPLVIFSAVFALSKIQELYHHLLSAKNKLQHYSDSSNWLAIFVFMVYTIFSLSRSSALYIGYHAPLDVYPELTNLVTPYDPDTKPMFHSEKKINVCVGREWYRFPSSFFLPENWELHFVKSQFAGQLPQPYQQGADATKIIPRNMNDMNREEFSRYINVEKCHLLIDLDLPTASEHEKNYSQIKNKWQIIYSKKFLDASRSHQLYRAFYVPFLSEKHCTFVDYNILRRINMTPKRK 1702
            G    + W P  S  F  LLSAR+ A+ LSNISDCDETFNYWEPTHYL+YG GFQTWEYSP YAIRSYAYL  +  PA     +   NKI VFY++R +L  +   CE YF+ ++  +FG HV+RM   F +++TGMF SS+AFLPSSF MY+ L+A  GW+    ++A+ G+A G +LGWPF A LG+PIAFD++  +     F  WS    +  ++P+V +DS+YYGK VIAPLNI LYNVF   GPDLYG E W FY INGFLNFNV F +ALL LP+  + +Y+ Q+  +  L  P W+ L+P+YIW ++FF +PHKEERFLFP+YPL+      ALS +Q+ YH +   + +L+HY+ +SNWLA+    ++ + S SRS AL+ GYH PLD+YPE   + T     T P     + +NVCVG+EWYRFPSSF LP+NW+L F+ S+F GQLP+P+ +G  AT+I+P +MND N EE SRYI++ KCH L+DLD    +  E  YS  K +W  +  + FLDASRS +L RAFYVPFLS+++  +V+Y IL+       RK
Sbjct:   47 GNKAGQVWAPEGSTAFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGEGFQTWEYSPAYAIRSYAYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTSIAVLGVAAGAILGWPFSAALGLPIAFDLLVMKHRWKSFFHWSLMALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTPHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQKCYHFVFQ-RYRLEHYTVTSNWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVP---EGRPVNVCVGKEWYRFPSSFLLPDNWQLQFIPSEFRGQLPKPFAEGPLATRIVPTDMNDQNLEEPSRYIDISKCHYLVDLDTMRETPREPKYSSNKEEWISLAYRPFLDASRSSKLLRAFYVPFLSDQYTVYVNYTILKPRKAKQIRK 607
The following BLAST results are available for this feature:
BLAST of TCONS_00051995 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALG90.000e+051.33Alpha-1,2-mannosyltransferase ALG9 OS=Homo sapiens... [more]
back to top