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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052013 ID=TCONS_00052013|Name=TCONS_00052013|organism=Clytia hemisphaerica|type=transcript|length=1345bp
TACCACCTCTCCTGTTATCAAGATTACACACGTCCGGAGACTGTTCAAAA
ACCGATGGAACCTTACAAAAAAATCGAGCTTGAAGCATTTCATCTTGTAA
TAGAAAAATGTCACGACATGAtctacaaacaaacaaacaaaatgcaTGAC
CTAACAATTTTGATGTCTGAATACCTTAGGGTTCGAGGCATCACCATTAA
CAATCCAACGAAGAAGAATCTGCGAAGGaacattgaaaaaactttcggaG
AAAAGATAACATTTGTAAACGCTTCAAATAAACTTTTTCTATATCCATCT
AATATAACAAATGAACAAATATTTAAGGAACTTTATAAAACTCAAGACGA
CAATCAAGTTATAATAAATGCTGCCAAGATAATGGAGATCAACAGTTTAA
AGGATGACATACCTTGGCCTCCACAACCTGAAGACCTCGAACCAGATGCG
TTTAAAATTCCAAACCAACTGGGAAAGTTTTTACTCCGATTATTTGGGAA
TAAATCTCCTGAAGATGCAAGCAACCAAAGTTCAAGATATCAGCATTCAA
TCGCACAAGATTTGATATACACAGAAACTGCTGGAAGAGTAAAGACTCTG
AAAAGTCTGTTACTGCAATGTGTGGTAAAATCACTGACCAACAACGTTGA
AATCATCACGATTCTCAATCGTTTGGGTCATGGTGTATCATACTCTACTC
TGTCAGAAATGTTAACCGAAAATGCATACAAGATAGCCGATCAACAAGCA
TTTGCTGATGTTATTCTACCCGAAACTCTCGCCAAAGTCTTGTTCGCTAT
ATATGTTGCCGATAACATTGATAGAAATGAAGAGACACTACCATTTCTTG
TTTCCTATAATCGTGCGTTATTTTTTCTATGTTTAACTTTGCAAATCAAA
ATTGTAAAtctaaattcgtttttttcaaactaACAAGTTTTTCATCTCTA
TTTCAAATATTGTAGGTTATGGAACCACTCACAAAGTCAACAACCTTATC
ATTCAAAAGAGCCAAGGTTCGTTCACAGACGTTGCAAGACGAAAATCAGA
CCCAAAAACAAAACGTGGACAAGGATCATTCAAGGCGAATCAAGAAACCC
CCAGCGTCGAGTATGTCAAAACCAAACGTATTGGTCCGCCAACAGCAGAG
TTCGTTGAAAATGAAGAGAGTGCACTTTTGATTGACGACGTAAATCAACG
TCATTTCCTTTGGTGTTTGATGCGTCACAATGATAGCGTACCTTACATTG
TACCAAGCATGACTGGTTTTCAGATTTCTATTTGCAACAAGATACCAACC
TTGAAATCCAACATCGCATACCTTGATTGTATCTATGCATCTGCC Run BLAST on NCBI protein sequence of TCONS_00052013-protein >TCONS_00052013-protein ID=TCONS_00052013-protein|Name=TCONS_00052013-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
YHLSCYQDYTRPETVQKPMEPYKKIELEAFHLVIEKCHDMIYKQTNKMHD
LTILMSEYLRVRGITINNPTKKNLRRNIEKTFGEKITFVNASNKLFLYPS
NITNEQIFKELYKTQDDNQVIINAAKIMEINSLKDDIPWPPQPEDLEPDA
FKIPNQLGKFLLRLFGNKSPEDASNQSSRYQHSIAQDLIYTETAGRVKTL
KSLLLQCVVKSLTNNVEIITILNRLGHGVSYSTLSEMLTENAYKIADQQA
FADVILPETLAKVLFAIYVADNIDRNEETLPFLVSYNRALFFLCLTLQIK
IVNLNSFFSN Run BLAST on NCBI transcript from alignment at scaffold_208:161054..162398 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052013 ID=TCONS_00052013|Name=TCONS_00052013|organism=Clytia hemisphaerica|type=transcript|length=1345bp|location=Sequence derived from alignment at scaffold_208:161054..162398 (Clytia hemisphaerica)
GGCAGATGCATAGATACAATCAAGGTATGCGATGTTGGATTTCAAGGTTG
GTATCTTGTTGCAAATAGAAATCTGAAAACCAGTCATGCTTGGTACAATG
TAAGGTACGCTATCATTGTGACGCATCAAACACCAAAGGAAATGACGTTG
ATTTACGTCGTCAATCAAAAGTGCACTCTCTTCATTTTCAACGAACTCTG
CTGTTGGCGGACCAATACGTTTGGTTTTGACATACTCGACGCTGGGGGTT
TCTTGATTCGCCTTGAATGATCCTTGTCCACGTTTTGTTTTTGGGTCTGA
TTTTCGTCTTGCAACGTCTGTGAACGAACCTTGGCTCTTTTGAATGATAA
GGTTGTTGACTTTGTGAGTGGTTCCATAACCTACAATATTTGAAATAGAG
ATGAAAAACTTGTtagtttgaaaaaaacgaatttagaTTTACAATTTTGA
TTTGCAAAGTTAAACATAGAAAAAATAACGCACGATTATAGGAAACAAGA
AATGGTAGTGTCTCTTCATTTCTATCAATGTTATCGGCAACATATATAGC
GAACAAGACTTTGGCGAGAGTTTCGGGTAGAATAACATCAGCAAATGCTT
GTTGATCGGCTATCTTGTATGCATTTTCGGTTAACATTTCTGACAGAGTA
GAGTATGATACACCATGACCCAAACGATTGAGAATCGTGATGATTTCAAC
GTTGTTGGTCAGTGATTTTACCACACATTGCAGTAACAGACTTTTCAGAG
TCTTTACTCTTCCAGCAGTTTCTGTGTATATCAAATCTTGTGCGATTGAA
TGCTGATATCTTGAACTTTGGTTGCTTGCATCTTCAGGAGATTTATTCCC
AAATAATCGGAGTAAAAACTTTCCCAGTTGGTTTGGAATTTTAAACGCAT
CTGGTTCGAGGTCTTCAGGTTGTGGAGGCCAAGGTATGTCATCCTTTAAA
CTGTTGATCTCCATTATCTTGGCAGCATTTATTATAACTTGATTGTCGTC
TTGAGTTTTATAAAGTTCCTTAAATATTTGTTCATTTGTTATATTAGATG
GATATAGAAAAAGTTTATTTGAAGCGTTTACAAATGTTATCTTTTCtccg
aaagttttttcaatgttCCTTCGCAGATTCTTCTTCGTTGGATTGTTAAT
GGTGATGCCTCGAACCCTAAGGTATTCAGACATCAAAATTGTTAGGTCAt
gcattttgtttgtttgtttgtagaTCATGTCGTGACATTTTTCTATTACA
AGATGAAATGCTTCAAGCTCGATTTTTTTGTAAGGTTCCATCGGTTTTTG
AACAGTCTCCGGACGTGTGTAATCTTGATAACAGGAGAGGTGGTA Coding sequence (CDS) from alignment at scaffold_208:161054..162398 >TCONS_00052013 ID=TCONS_00052013|Name=TCONS_00052013|organism=Clytia hemisphaerica|type=CDS|length=933bp|location=Sequence derived from alignment at scaffold_208:161054..162398 (Clytia hemisphaerica)
TtagtttgaaaaaaacgaatttagaTTTACAATTTTGATTTGCAAAGTTA
AACATAGAAAAAATAACGCACGATTATAGGAAACAAGAAATGGTAGTGTC
TCTTCATTTCTATCAATGTTATCGGCAACATATATAGCGAACAAGACTTT
GGCGAGAGTTTCGGGTAGAATAACATCAGCAAATGCTTGTTGATCGGCTA
TCTTGTATGCATTTTCGGTTAACATTTCTGACAGAGTAGAGTATGATACA
CCATGACCCAAACGATTGAGAATCGTGATGATTTCAACGTTGTTGGTCAG
TGATTTTACCACACATTGCAGTAACAGACTTTTCAGAGTCTTTACTCTTC
CAGCAGTTTCTGTGTATATCAAATCTTGTGCGATTGAATGCTGATATCTT
GAACTTTGGTTGCTTGCATCTTCAGGAGATTTATTCCCAAATAATCGGAG
TAAAAACTTTCCCAGTTGGTTTGGAATTTTAAACGCATCTGGTTCGAGGT
CTTCAGGTTGTGGAGGCCAAGGTATGTCATCCTTTAAACTGTTGATCTCC
ATTATCTTGGCAGCATTTATTATAACTTGATTGTCGTCTTGAGTTTTATA
AAGTTCCTTAAATATTTGTTCATTTGTTATATTAGATGGATATAGAAAAA
GTTTATTTGAAGCGTTTACAAATGTTATCTTTTCtccgaaagttttttca
atgttCCTTCGCAGATTCTTCTTCGTTGGATTGTTAATGGTGATGCCTCG
AACCCTAAGGTATTCAGACATCAAAATTGTTAGGTCAtgcattttgtttg
tttgtttgtagaTCATGTCGTGACATTTTTCTATTACAAGATGAAATGCT
TCAAGCTCGATTTTTTTGTAAGGTTCCATCGGTTTTTGAACAGTCTCCGG
ACGTGTGTAATCTTGATAACAGGAGAGGTGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052013-exon-scaffold_208-1491911889:161054..162398 | TCONS_00052013-exon-scaffold_208-1491911889:161054..162398 | Clytia hemisphaerica | exon |
| TCONS_00052013-exon-scaffold_208-1510915933:161054..162398 | TCONS_00052013-exon-scaffold_208-1510915933:161054..162398 | Clytia hemisphaerica | exon |
| TCONS_00052013-exon-scaffold_208-1575043694:161054..162398 | TCONS_00052013-exon-scaffold_208-1575043694:161054..162398 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_208 | supercontig | scaffold_208:161054..162398 . |
Blast
The following BLAST results are available for this feature:
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