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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052037 ID=TCONS_00052037|Name=TCONS_00052037|organism=Clytia hemisphaerica|type=transcript|length=877bp
ATGGTATCATGATAAGCAAAAGGTCTATAAAACTCCTGTTCATTACGGTG
CTGACTCCTTCATACGGgtgaaagaagatttttttgttattcaatCCGTG
CGGGTGAAAGTTGTTTATATcggttagggtcagggttggagtgCATTTCT
CTTTCCATAATTTCTCATATAGCTGTTCCCTTGATCTCCCGACTTTGACT
TTGCTCTACTAAAGCACTAAAAAAGCCTATAAGATTGAACTTCGATTGTT
TGATTTGTtcaaaaagtttgattgatcAGGTCTGGTTCATATAAACTTTT
TATACAGACTGTGCGTGTGGCGGCGGCACAAGAAGGTAAAGTAAATATGG
AAAACAGAAAAAGCACAATAACCcgtgaaaaaatttaattttacctGTTA
GCATTTTGTTCCGCAATTCCATTGATATTCCCATCTCTATTCTCCTCAGC
ACTCTCATCGTGTGATTGATCAGTAGTATCAGCAACATTGTCACTGTCAT
CATCagtatcatcatcatcatgttCTCCCCTCAGCAGACTATCTGAACTT
TCAGTAACATCTTGATCTTGTtgttcatcaataaaatttccTGACTGGTT
GATACTATTGCTAACATTGCTGCTACAGTGACCAGGGACAGATTGCATGC
TTGCCTCACTCTCTTGTACTTGTTGTAATTCATTTCTATTGCTTTCCCCG
AACAGTTCCTCAAATTCTTTACGATTTCTTATTTCAGTAGCAGGATTGAC
AGCTTTGTTTCTGCATATTGAACAAGGACAGTGTACATGTGCTTTATCCG
ATTCAATTATCAAATTTCAAGTCTGGAGATTATTAAATTCGTGCATGCGC
TTTAGCCGACATATTTCCTGGTCAGAC Run BLAST on NCBI transcript from alignment at scaffold_208:402593..403469 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052037 ID=TCONS_00052037|Name=TCONS_00052037|organism=Clytia hemisphaerica|type=transcript|length=877bp|location=Sequence derived from alignment at scaffold_208:402593..403469 (Clytia hemisphaerica)
GTCTGACCAGGAAATATGTCGGCTAAAGCGCATGCACGAATTTAATAATC
TCCAGACTTGAAATTTGATAATTGAATCGGATAAAGCACATGTACACTGT
CCTTGTTCAATATGCAGAAACAAAGCTGTCAATCCTGCTACTGAAATAAG
AAATCGTAAAGAATTTGAGGAACTGTTCGGGGAAAGCAATAGAAATGAAT
TACAACAAGTACAAGAGAGTGAGGCAAGCATGCAATCTGTCCCTGGTCAC
TGTAGCAGCAATGTTAGCAATAGTATCAACCAGTCAggaaattttattga
tgaacaACAAGATCAAGATGTTACTGAAAGTTCAGATAGTCTGCTGAGGG
GAGaacatgatgatgatgatactGATGATGACAGTGACAATGTTGCTGAT
ACTACTGATCAATCACACGATGAGAGTGCTGAGGAGAATAGAGATGGGAA
TATCAATGGAATTGCGGAACAAAATGCTAACaggtaaaattaaatttttt
cacgGGTTATTGTGCTTTTTCTGTTTTCCATATTTACTTTACCTTCTTGT
GCCGCCGCCACACGCACAGTCTGTATAAAAAGTTTATATGAACCAGACCT
gatcaatcaaactttttgaACAAATCAAACAATCGAAGTTCAATCTTATA
GGCTTTTTTAGTGCTTTAGTAGAGCAAAGTCAAAGTCGGGAGATCAAGGG
AACAGCTATATGAGAAATTATGGAAAGAGAAATGcactccaaccctgacc
ctaaccgATATAAACAACTTTCACCCGCACGGattgaataacaaaaaaat
cttctttcacCCGTATGAAGGAGTCAGCACCGTAATGAACAGGAGTTTTA
TAGACCTTTTGCTTATCATGATACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052037-exon-scaffold_208-1491911889:402593..403469 | TCONS_00052037-exon-scaffold_208-1491911889:402593..403469 | Clytia hemisphaerica | exon |
| TCONS_00052037-exon-scaffold_208-1510915933:402593..403469 | TCONS_00052037-exon-scaffold_208-1510915933:402593..403469 | Clytia hemisphaerica | exon |
| TCONS_00052037-exon-scaffold_208-1575043694:402593..403469 | TCONS_00052037-exon-scaffold_208-1575043694:402593..403469 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_208 | supercontig | scaffold_208:402593..403469 . |
Blast
The following BLAST results are available for this feature:
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