TCONS_00052038 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052038
Unique NameTCONS_00052038
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length145

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052038 ID=TCONS_00052038|Name=TCONS_00052038|organism=Clytia hemisphaerica|type=transcript|length=145bp
TTTCCAGCTGGCTAATTCAAGGAACAGCTCAATCTTTCGATCtttgtcca
gaaaaaaaaaacttaatctcGACCGGAACAGCTCCAGATTTCCAGCTAGT
TGGCTACAGGAACAGCTCCCAAGTTCTATATCAGTTGTGAAAATT
Run BLAST on NCBI

transcript from alignment at scaffold_208:502227..502371

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052038 ID=TCONS_00052038|Name=TCONS_00052038|organism=Clytia hemisphaerica|type=transcript|length=145bp|location=Sequence derived from alignment at scaffold_208:502227..502371 (Clytia hemisphaerica)
AATTTTCACAACTGATATAGAACTTGGGAGCTGTTCCTGTAGCCAACTAG
CTGGAAATCTGGAGCTGTTCCGGTCgagattaagttttttttttctggac
aaaGATCGAAAGATTGAGCTGTTCCTTGAATTAGCCAGCTGGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032954XLOC_032954Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052038-exon-scaffold_208-1491911889:502227..502371TCONS_00052038-exon-scaffold_208-1491911889:502227..502371Clytia hemisphaericaexon
TCONS_00052038-exon-scaffold_208-1510915933:502227..502371TCONS_00052038-exon-scaffold_208-1510915933:502227..502371Clytia hemisphaericaexon
TCONS_00052038-exon-scaffold_208-1575043694:502227..502371TCONS_00052038-exon-scaffold_208-1575043694:502227..502371Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_208supercontigscaffold_208:502227..502371 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052038 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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