TCONS_00052077 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052077
Unique NameTCONS_00052077
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1793

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052077 ID=TCONS_00052077|Name=TCONS_00052077|organism=Clytia hemisphaerica|type=transcript|length=1793bp
tgaaaaattaaatacttgcaacatcaaaaagtttgaactcacttttttat
gatggttgTCAGATGGTAGATGCGGCACCCAAATGGTTGTAGTTGGATAA
GAACTGTTTAGCTTTTATACAacgGGAAGGCGAAAGATGGCAAAGATGTG
ATTATGGAAAAGGAGATCCACGAGTATATTTTCGATGGAATGAATAAAGA
TATTCGTCCTGAAATCAAACATGGAGTTCCTACACATGTCCATTTCGATA
TGAAGCTACAGAAAATTGTCAACTTGgatgtcaagcatcaacaattTGTT
GTCAATACATTCATCAAAATGaGATGGGTTGATCCACAGTTGCGATGGAA
CAAGACAAAGTACGAAGGAATCGAATCCATCAATGTTGGATCCAGTCTTA
TTTGGACGCCCGACATCGTTCTTTATAACGCAGCCAATGAGGACAGTTTT
GCTCATACTGATGTTTACAAGACCAAAGCATTAGTATCTCACACAGGAGA
AGTGNGAGCCAATGAGGACAGTTTTGCTCATACTGATGTTTACAAGACCA
AAGCATTAGTATCCCATACAGGAGAAGTTCTTTGGTCAGCACCCGTCATG
TGGAGAGTGTCTTGTGAATTTGATATCACCTGGTTTCCACTTGATCGTCA
GGAATGTACAATGAAATTTGGATCGTGGTCTTACATGAACAATCAAATGA
GATTGTCATTATGGTATGACGTCAGTCAATCAGTCAACGAAATCGGACAC
AGTCATTTTATGGTGAAAAGTGGTGAATGGGATATCAATGATGTCGAAAT
CAACCAAGAAGAAGTTCCTTACCCTTGCTGTCAACAACCTTTCTCCACTA
TCCAATACACCATCACGTTAAACCGCATGGTGCTATACTATTTCCTATAC
ATCATTATGCCTTTAGTGTCACAGATCTTGGTCTTTTTCTGTATCTTTCA
TATCCCGTATGGGGTTGGAGATCGGATGAGTTTTGGTGTCACCATTCTTC
TTGGAATCACTGTGTATCTGTTGGTGATATCAGAAAAGTTGCCTGAGAAG
TCTGATAATAAACCGATGCTGGGTTTATGTTTCATTGCTGAATTCTACAT
CTTGAGTATCTCACTCATTTTCGCCTGCTTGAATATCAAATTAGCCAGCA
AGACCACCCCGCCACCTGTTTTTCTGCTTCATTTATGTTCGCTTAAGGAT
GTATGTCATTCTGGTGGAAACGGCGTGTCATCAGAGAATTTGTTACAAAT
GGCACCGATGCATGGTTCATCTGGTTATCTCCATGGTGATGGCGAGTCCC
AGTCTCCTGAAGCTCCGATTGTCCAGAAGAAACGTTATGCACCATCGCCA
GAGCAATGTAAAGAGCAATGGGAGAAAATTTCATTGTATCTCGATCGTGT
ATTCTTTTATGTGTTTTGTGGAACAGCTCTTTTGATCCCTCTCATTGTTG
CTGCGTCTCTTGACCGAAAGATGCTTGGTGTTGTTTAAACCTTGGTTGGT
ATTCTCGATAAGATGAAATTCACATACACAATTTAATTTTACACAATACG
TTTTATCAACGTACATACAACACTGCTTGGATTCAATGGCAGGTCTCTAA
CTACTTGTCTAGGTCACACTTCTCATAAAATTGTGCCTAGTCTTTTTCTG
GCCACTATTATTTGGATGTATTTGGATTCTTAGACACCAATTTGAAGTTG
TATATGTCCTGGGATGTTGTGATGAAGTTCAAGCGAAATGAAATGGTTCG
AGAGTAAAAGTATTAAAAAGCcaaacctttaccacgccttctN
Run BLAST on NCBI

transcript from alignment at scaffold_21:27268..34259-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052077 ID=TCONS_00052077|Name=TCONS_00052077|organism=Clytia hemisphaerica|type=transcript|length=6992bp|location=Sequence derived from alignment at scaffold_21:27268..34259- (Clytia hemisphaerica)
TGAAAAATTAAATACTTGCAACATCAAAAAGTTTGAACTCACTTTTTTAT
GATGGTTGTCAGATGGTAGATGCGGCACCCAAATGGTTGTAGTTGGATAA
GAACTGTTTAGCTTTTATACAGTAAGTAAACAAGTTTAAACCTACCTGAT
AATGATTGAATTTCCCTTGATATTTAAAAATGCATTTTAAACGTGGAAAA
GTTTTGGTTGTGAATTTAAGGACATTTTCTTGCACGTGCTTTTTAAGATC
GACCGACCGCCTCACTTTGTAGACCGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
CCGCCTCACTTTGTAGACCGACCGGCCACCTCACTTTGTAGACCGATCGA
CCGCCTCACTTTGTAGACCGACCGACCGCCTCACTTTGTAGAACGACCAA
CCGCCTCACTTTGTAGAACGACCGACCGCCTCACTTTGTAGACAGACCGA
CTCACTTTGTAGGCAGACCAACTCACTTTGTAGACAGACCGACTCACCCT
TTAGACTGACCGACTCACTTTTTAGACTAACCGACTCACTTTTTAGAGAA
CGACCGACTCAATTATTAGACCGCCCGACTCACTTTTTAGACCGACCGAC
TCACTTTTTAGAACGACCGACAGACTCACTTTTTAAACCGACCGACTCAC
TTTTTAGACCGACCGACCCTCTTTTTAGACCGACCGACTCACTTTTTAGA
ACGACCGACTCGCTTTTTAGAACGACCGACCGACTCACCTTTTAGAATCT
AAATGTCCAAATTCACAACCAAAAGGTTTTTCATGTTTAAAATGCACGTT
TGTTTAGATTTAATATTCAAAGATAATCGACCGACATGATACAATATATC
ATTATCGGTCGACATTTTCTTCCACATGTGTATAAAATGTGGAAAACTTT
CCGCTGTGAATTTGGACATTTTCTTCCCCCTGTGCGTGTAAAATGTGGAA
AACTTTCACTTTTGTCGGTCATAAACTTGACATTTTCTTTCACGTGCGTT
TAAAACGTGGAAAACTTTTGGTTGTGAATTTGGACGTTTTCTTCCCTGTG
CGTTTAAAATGTGGAAAACTTTCAATTTTGTCGTAAACTTGACATTTTCT
TCCACGTGCGTTTAAAACGTGGAAATTTTTGCTGTGAATTGATGTGTTCA
ACAACACTCTACTCGGCGGGTGCGACGCCGGGTGACGGCTAGTCTAAGAT
TCTAAGGGGCTTTCCAAACTTTTTTCAGAACAACAAATAGGTCAAAATTT
TAATTGTCCCAATTTTTTACCCAAGTTCTTAAATCTAGCCACATCGATTT
AATTTTTTGCCTCGAATTTCTGACGATGTCTGATATTTGACCTTTTCTGA
GATACCCTAGGTCTGCTTCATTTTCTTCGCTAGTTTGTCCTAAGGGGTGA
AATATACCGCCCGTTGAGCTCCATTCTACATTCTACTATAATTTTTGTTG
GAATCATATTTTATACAATTATTATAGAAATAGTAGAATAAAAATATTTA
GTTGTTTTATTATTTTTGTTATGTTCGAACTTGATTTGCCCGTAGGATAT
TTTCTTTGTTTTTAATTTGAACATTGACCTGAACATCATGTTAGTTATCA
TGAATAACCCAAAAAAATAAAAAAAATATTTCTATGAGGCTAGTTCCTTC
AGAAGCTCGAGGCAAAATAAGTCATCATAACTGGTTACACCGTTGAGCAA
ATCTAATGGCTCCAAACTGGTGGTTTCACTACCTAAATACTTTTACTTTT
ATATACGTCACCTTTGAATTGGCAAACTGTGATGTTGGACGTAAGTCATT
TTTTTATTGCAGTGTCTATCAATTTTATCCAATAAAGATTCTGGCTTTCA
TTCCTACACCTTGAACGTTTCCCAAATTACGAAATTTCATGGTTAAGCCT
GTTCAAAAAACACCCCTGTCTCATAGACCCGCTGGACCTATCGTCCCACT
GGAAATAATTTAGCCAAAATTTCGTCTCAGTCGAAAAATACCATACAATA
TGAACCCCACTGGAAAAATGACTTTGATTTAATTCCCATTGTAAAATTTA
TGTAAAAAAATTGCACTACAAAATCATACCCATTGGATTTTTATATTTTA
TTTTATATTGGAACAAAATCTCTTTCTTTTTTTAAAAGACGGGAAGGCGA
AAGATGGCAAAGATGTGATTATGGAAAAGGAGATCCACGAGTATATTTTC
GATGGAATGAATAAAGATATTCGTCCTGAAATCAAACATGGAGTTCCTAC
ACATGTCCATTTCGATATGAAGCTACAGAAAATTGTCAACTTGGTAAGTG
TAATAGATTTGCAACATCATACTCTAAGGTCTCAAATAAGCGTCTTCGCG
GTCATTAGATTTTGAAAAAAAAATTAAAAATTTCTTCATATAGCTGATAT
CAGCTAGATAACTTGATCAGTTATATATATAACTGACCTGGCGATCTAAA
GTTTATCGTATGGTGTCCAAAAAAACTTGACTCGATCAACGGCAGAGCAA
AATGTTAAAATAGGAAAATACGGAAGCTTTATGATTAACCCAAGTTTGAT
TTTCTAAGCTAAGCAGGATTAAGCTATTAGTCCTTATTAGACTGATTAGA
TAGAGAAAAATAATTGAAATATCCTTTGTTGATTTTCAAGGGCTAGTGTC
AGCATGCGACTAGTAGTTTTAATTTTAAATCCTTTGACCGTTGTTTTGTC
TAGTTGACTTTTAAGTATGACTCAATCTCATAAGCAGATTTAAGGCTTTA
AGATCATAAATAACTATTTGAGTGCGTTGTCAATCAATTCAGTTCATACA
TTAAAAGCATAAAGCATGGAGAGTGTCCCAAAAAACCCATTTGCCCATTT
TGGAAATATATGTTTTGCAAATGCTTACGAGTTGAAGTACGTTCATTTGA
AAAATACACCTGTTTGAATGTCCGAATCCTCTAAGGTGATTTCCGATGAA
GTTCATTATTAAACCGACAACATCTCTGATCAAATGCCAATCTCTGTATC
TCCATGACATTTCCTTTGCTTGGCTTCATCTTTCTTACTAATATTTCAGT
TTTTCAAAAATCGGATTATAACTCTATCCGTCTATAATCGGATTTGATAA
ACAAATAAACTACAAATGAAAATATTTTTCTGTTTGTTTATTTAGGATGT
CAAGCATCAACAATTTGTTGTCAATACATTCATCAAAATGGTAATTATTT
TCCACAAGTCCATGGGTATCTTTTAAATGCTTTTAAAGATGCTTTATTGA
ATTTAAAATCTCATTAGGGGCTAGAAGTGACTCCTTAGAAATGTAAGATA
ATTTTAAACGCTCCTTATTTGCCATAATTTACCTAGTCTGAATCGCAGAC
ATCTGTAGATATACTTCCTTTATATCTATAAGAAATCTTTTTCGCTAGAG
GATGAGCATCAGAAGCCTATAATTTACCATATCGTTATTAACTATTTAAA
TATTGTCAGCTCGATCTAAGATTTTAAAGCAGTATACCCAGTTCGTAACT
CTTTCCATGCCTCAGCGTTTACATCAGCCTGTCTCAAGAGCTCTCATGTA
GTAAGATGATAAAAAAACAAAGACCAAGTCTATGTTGGCGTGGGTCAAGT
TTACGTAGGCATGGGTCTCACCACGTCTCTTCGTAAACGTGTAATAGAAA
ACAATTTTCGCGACACTATGAAATTTCTTCTTCTTTAGAGATGGGTTGAT
CCACAGTTGCGATGGAACAAGACAAAGTACGAAGGAATCGAATCCATCAA
TGTTGGATCCAGTCTTATTTGGACGCCCGACATCGTTCTTTATAACGCGT
AAGTTTGTAATATTATAGCTTAGACAACCGTTGGTTGCTAGCCCATACCG
TGCACGGTTTTTCGGCAGCAAAATAATGAAAGATCGCATGACGGGCTGTA
CAGATAGAGGGGACCTAGGCAAAGGAGAATTAGAGCATAGCGTAACCGAA
TCATTTTTCAGATCATGGAGGGAATGGGCTCTTCCAGAAAAAAAATTGTA
TAAGGGGGGTGGAGGATAACAATTTTCAGTGATTTACCCCCCGGACAAAG
TGACTTATGGCCCCCGGACAAGGGGTTTTACCCCCGGAAAAGCTTCAGTT
GACCCCCCGGACAATCCAAATTACCCCCTGACAGAGCAAATTTACCCCCG
GCCAAGGCAAATTTTGATGATTTTTCTCTACCCCCTTCCGGACAATATAT
CCTCCACCCGGGGTGTACGACCATTTTCTGGAAGAACCCTATCACAATTC
ATCCAAACTTCAGATTCACCCTTGATTTGAGTTTATCAAAGAATCCGTTA
AAATCTTCTGAGAGAGTCAGTACCTTCCGTGTAGCTGCAGAAAGGTCGTT
GAAATTTGAAATCATCGCCATCGGCATTTTCTCTTTTCGTCCTATGTAGA
GCCAATGAGGACAGTTTTGCTCATACTGATGTTTACAAGACCAAAGCATT
AGTATCTCACACAGGAGAAGTGNGAGCCAATGAGGACAGTTTTGCTCATA
CTGATGTTTACAAGACCAAAGCATTAGTATCCCATACAGGAGAAGTTCTT
TGGTCAGCACCCGTCATGTGGAGAGTGTCTTGTGAATTTGATATCACCTG
GTTTCCACTTGATCGTCAGGTATGTAGAAACCGGTTTTAGGGCTCTTTTT
AACCTCAATAGACCTTTTCATAAATTACGTTACGAACATCACTTGCCTCG
TTTTGAAATTATTGCCATGGTGATTAACTTCCAGCGGATTTTATTAAAAC
TACTTCCTATTCATAAAAAAATCATGTCTCAAGAGACATAATCACCATGG
TAATTGTTTGAATACGAAGCAAGTGATGTTCGTGACGTAATTTATGAAAA
GGTCAATTTCGAACATTCTATCTGAGTCGTCTTGGGTAGCTCTGTAGCAT
ATATTAGTAAAATTTTGACACAGACAAAAGTGCAAATAGATGTTTTTATG
ACCCTCTAATTGGTTGTAACGCAAATCGAACCTTCACAAATCAATCCTAT
AATGGCTCACAATAAGACAATGGTCCCATCAACTGTATCGACTTGGACCT
TTTGAAAACAAAATCTTTGTAATCAGAAAGCCAACCCTATTGAAGAGGAT
TATGCATGCAAATTATTCATGTGAAATTTCCTTAGATATGAATTTGGACT
TTTTTCTTACTGACTTTAGTTGGTTAGACATTGTAAAAACGAAATTCAAA
ATTTCAACTTGTGCTAATAGCGAATTTGTCAGGTGAAATCGTTAAGTAAC
TCTGATATGTAAATCTCCTGTGCAAGAAGATAAGCAAGTACTTCCTTTCC
TATATTCCTTTTCCCAGGAATGTACAATGAAATTTGGATCGTGGTCTTAC
ATGAACAATCAAATGAGATTGTCATTATGGTATGACGTCAGTCAATCAGT
CAACGAAATCGGACACAGTAAGTTTTCATGTTATTGACACTGCTGTTTAG
CTGGGCGACTAAATTTAAACACCCCTTCTCACAGACCCGGTAGGATCTTT
TCAGCCAATGGGGATAAAAAGTCAGAAAATTCAGTGGGGATGGGGAAATA
ATTATTTTGCAGTGAAGATTGGTTTATTTGATTATTTTCGTTGGGGACAA
AAATTGGGGGATAATTTTCCACCGGGGACGATTTTTCAAGTGGGAAGGCG
GGTTCTAGTGGGTCTGTGAGAAGGGGGTGTTTTTAAATGTTTGAGTGAAT
CCTCACCCAAGCATTTCTATTGCCATTATCATGGACCTAATTTGACTCGT
GTTGTTTATTGCAACTCTAAAAATATCTTGATTTTTCTTTTGAGATATAA
AGGGAATTTCATTTGTTTTTTTCCAAAAATTAAGATATTTGACGTGTTTG
ACTATAGAATTTTGACTCTAGCTTTCAAATTCTTTCTTCATCTTTTTCAG
GTCATTTTATGGTGAAAAGTGGTGAATGGGATATCAATGATGTCGAAATC
AACCAAGAAGAAGTTCCTTACCCTTGCTGTCAACAACCTTTCTCCACTAT
CCAATACACCATCACGTTAAACCGCATGGTGCTATACTATTTCCTATACA
TCATTATGCCTTTAGTGTCACAGATCTTGGTCTTTTTCTGTATCTTTCAT
ATCCCGTATGGGGTTGGAGATCGGATGAGTTTTGGTGTCACCATTCTTCT
TGGAATCACTGTGTATCTGTTGGTGATATCAGAAAAGTTGCCTGAGAAGT
CTGATAATAAACCGATGCTGGGTTTATGTTTCATTGCTGAATTCTACATC
TTGAGTATCTCACTCATTTTCGCCTGCTTGAATATCAAATTAGCCAGCAA
GACCACCCCGCCACCTGTTTTTCTGCTTCATTTATGTTCGCTTAAGGATG
TATGTCATTCTGGTGGAAACGGCGTGTCATCAGAGAATTTGTTACAAATG
GCACCGATGCATGGTTCATCTGGTTATCTCCATGGTGATGGCGAGTCCCA
GTCTCCTGAAGCTCCGATTGTCCAGAAGAAACGTTATGCACCATCGCCAG
AGCAATGTAAAGAGCAATGGGAGAAAATTTCATTGTATCTCGATCGTGTA
TTCTTTTATGTGTTTTGTGGAACAGCTCTTTTGATCCCTCTCATTGTTGC
TGCGTCTCTTGACCGAAAGATGCTTGGTGTTGTTTAAACCTTGGTTGGTA
TTCTCGATAAGATGAAATTCACATACACAATTTAATTTTACACAATACGT
TTTATCAACGTACATACAACACTGCTTGGATTCAATGGCAGGTCTCTAAC
TACTTGTCTAGGTCACACTTCTCATAAAATTGTGCCTAGTCTTTTTCTGG
CCACTATTATTTGGATGTATTTGGATTCTTAGACACCAATTTGAAGTTGT
ATATGTCCTGGGATGTTGTGATGAAGTTCAAGCGAAATGAAATGGTTCGA
GAGTAAAAGTATTAAAAAGCCAAACCTTTACCACGCCTTCTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032983XLOC_032983Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052077-exon-scaffold_21-1575043694:34139..34259TCONS_00052077-exon-scaffold_21-1575043694:34139..34259Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1575043694:31917..32071TCONS_00052077-exon-scaffold_21-1575043694:31917..32071Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1575043694:31020..31064TCONS_00052077-exon-scaffold_21-1575043694:31020..31064Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1575043694:30412..30521TCONS_00052077-exon-scaffold_21-1575043694:30412..30521Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1575043694:29591..29810TCONS_00052077-exon-scaffold_21-1575043694:29591..29810Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1575043694:28793..28892TCONS_00052077-exon-scaffold_21-1575043694:28793..28892Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1575043694:27268..28309TCONS_00052077-exon-scaffold_21-1575043694:27268..28309Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1510915933:34139..34259TCONS_00052077-exon-scaffold_21-1510915933:34139..34259Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1510915933:31917..32071TCONS_00052077-exon-scaffold_21-1510915933:31917..32071Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1510915933:31020..31064TCONS_00052077-exon-scaffold_21-1510915933:31020..31064Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1510915933:30412..30521TCONS_00052077-exon-scaffold_21-1510915933:30412..30521Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1510915933:29591..29810TCONS_00052077-exon-scaffold_21-1510915933:29591..29810Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1510915933:28793..28892TCONS_00052077-exon-scaffold_21-1510915933:28793..28892Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1510915933:27268..28309TCONS_00052077-exon-scaffold_21-1510915933:27268..28309Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1491911889:34139..34259TCONS_00052077-exon-scaffold_21-1491911889:34139..34259Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1491911889:31917..32071TCONS_00052077-exon-scaffold_21-1491911889:31917..32071Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1491911889:31020..31064TCONS_00052077-exon-scaffold_21-1491911889:31020..31064Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1491911889:30412..30521TCONS_00052077-exon-scaffold_21-1491911889:30412..30521Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1491911889:29591..29810TCONS_00052077-exon-scaffold_21-1491911889:29591..29810Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1491911889:28793..28892TCONS_00052077-exon-scaffold_21-1491911889:28793..28892Clytia hemisphaericaexon
TCONS_00052077-exon-scaffold_21-1491911889:27268..28309TCONS_00052077-exon-scaffold_21-1491911889:27268..28309Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:27268..34259 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.190752	0.456379	0.0735051	0.0598925	0.388899	0.31991	1.85916	2.52119	2.98759	2.64542	4.17137	3.10949	5.94508	5.55215	0.32143	0.383265	0.3472	0.636919	6.1525	11.2669	0.322824	0.164965	0.254545	0.132811	3.51598	2.55589	0.229043	0.353462	0.100343	0.316194
Blast
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BLAST of TCONS_00052077 vs. Swiss-Prot (Human)
Match: ACHA3 (Neuronal acetylcholine receptor subunit alpha-3 OS=Homo sapiens GN=CHRNA3 PE=1 SV=4)

HSP 1 Score: 189.504 bits (480), Expect = 1.705e-52
Identity = 109/336 (32.44%), Postives = 180/336 (53.57%), Query Frame = 1 
Query:  157 EKEIHEYIFDGMNKDIRPEIKHGVPTHVHFDMKLQKIVNLDVKHQQFVVNTFIKMRWVDPQLRWNKTKYEGIESINVGSSLIWTPDIVLYNAANEDSFAHTDVYKTKALVSHTGEVXANEDSFAHTDVYKTKALVSHTGEVLWSAPVMWRVSCEFDITWFPLDRQECTMKFGSWSYMNNQMRLSLWYDVSQSVNEIGHSHFMVKSGEWDINDVEINQEEVPYPCCQQPFSTIQYTITLNRMVLYYFLYIIMPLVSQILVFFCIFHIPYGVGDRMSFGVTILLGITVYLLVISEKLPEKSDNKPMLG--LCFIAEFYILSISLIFACLNIKLASKTT 1158
            E  + E +F+  N+ IRP      P  +HF++ + ++V +D  +Q    N ++K  W D +L+WN + Y G E + V +  IW PDIVLYN A                    G+   ++         KTKAL+ +TGEV W  P +++ SC+ D+T+FP D Q CTMKFGSWSY   ++ L L   +  S+N   +     +SGEW I      + ++ Y CC++ +  I Y++ + R+ L+Y + +I+P +    +   +F++P   G++++  +++LL +TV+LLVI+E +P  S   P++G  L F   F  LSI +    LN+   + TT
Sbjct:   35 EHRLFERLFEDYNEIIRPVANVSDPVIIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYNNA-------------------VGDFQVDD---------KTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVL---IGSSMNLKDYW----ESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTT 335
The following BLAST results are available for this feature:
BLAST of TCONS_00052077 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACHA31.705e-5232.44Neuronal acetylcholine receptor subunit alpha-3 OS... [more]
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