TCONS_00052083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052083
Unique NameTCONS_00052083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2666

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052083 ID=TCONS_00052083|Name=TCONS_00052083|organism=Clytia hemisphaerica|type=transcript|length=2666bp
TTCATCCGCGATAGTGAAACATCAAAAAATACCATAGAAAGAACTTAAAG
ATTGAATAAGATTTGAAGCGAGAAATATTGAAATCAAAATGAGGGTTTTG
TGTGTAATTTTGATATTGGAATCTTATATCATTGGAGTAGTTCTTGCAAA
TACCGGGGCTAGATTCACCgatacaaaaaataacaaaaagattGCCGCCG
GTGAAGACGATAAATATGTCAGTTTGAAAGGTTTAACGGAAGTGCAATGT
GTTGGTCATTGCACATTAACTGATGATTGCCATTCTGTGAATCACCATAG
TGATGACCAGATCTGTCTGGTGATTGATGAACCATTGGAAGGTGATTCTC
ATTTGATTGATGCTCATGgatggaaatatttcaagaagaCAAGAATAACA
AAAGAGGATGAAATCTCAACAAAGAATAACTTTGAAATAACAAATGCGTT
CAAACCAAACCCAAACAAGATCGTCAACTTTCTACCTTACCTAAAAGAAG
AATGGGAATTAACTTTCAATATCATAATCTATGGaaaatcagatcaaaac
aaaagtgGAATTTTCACAATGGCAAAAGAATTAACTGCTCAAAATAAATT
GTTAAACATTTATGTTATCACTTCCACCGATCAAAAGATTCGAGTTTACA
CAAAAGAGATGTCTTATTCTTTCAAGTTTGAATACAACAAATGGCATACT
ATCAAATTTACCCAACGTTCAAGTCCGATAAATGATCCGCTACAAACCCA
CGTAAGATCTCTGGTCGTTGATGGTATGTACGTCAACAAAATGCTTATCA
AACTACCAGAAGTCTCGGAGAACTTGATTTGTTTTGCTGGTTCACCTCAT
CACCTTGCGTTGAACGGTCGCGTCCGAAATTTGACGTTTAAACAAGATGG
CCTTCCGCATCGAAACATTCGACCAAAGCATAACTACATCTCAAACAACA
TCGATCCTTGGTACAGAGAATGGTACGTGAGGTTCACTCTGGTGATACAC
TCAATAGATTTCACCGATTCTAGCAGTTATCAACGGAAAGGTTACCATAA
TGTCATTCATTTCACAACTGGAGTAAACGACGGGTCAATGGGCACAAGAA
TCGTTTCAGCATTTATCAAAGATACCGGGACAACCATTTTAGGTGCAGAA
TATATGGCTAATGGGCAATGGAAACAAATATTCGTAAGTTACACGTTTGA
TCTTGATCGCGAATATCGtattgaatttaaaagttttgaatctCAAAATA
ACCCTGCAGCAAACATTATTCAGTTTTGGGTTGATGGATTAATGAACCCA
AACACTGTTACTAATTTCCAACCTATAATTCAAGGGACAGTGATAATATA
CGTCAGCGATCCTTGGTATAAACCTGCTGATGCGACACTTTTTGGTCTTG
AATATGGACCATTGGAATAATAAAAAACTTGAGTCCAATTGTTTTATCGC
GCACTCTTTTTTTTGCTACTATGTGGAAAACATGCCCGAGGGGGGCACTG
GCCTTGACGACCGACGGAAACGTGATTTGACCCTGTCAAATATCTCTTGA
GTCTGAAAAAAGGGACCTTGATCAGCGGCACATCCCcttaattttgccta
agtaactcCTCCCCTGGGATACCATGTCAGTGCAAATAGAATAATTCCCT
TCTTGGTAGCTTCCACATTGTagcaaaaaaattgtacatttaAAGCGATT
CAGAACAGGAACTTTATAAACGATGAGCAACCTCTATATCAAAATATAGC
AAGAGGGATATGTGCAGCCTACAAGCGAATGGACTCTGATGATAAATAAA
ATTATAAGGCTTCGGACAAAAACCTCCACTAAACTTAAAGTTAAAGAATT
GATTgaactttgatttcaaaaaagaattcttCTAAAACCAAGAGATGTAA
GCGATGTAAACGAGTGGAAATGGAAAGAGTGCTACCAACAtcataatttt
tctttaatccACCGACAACACCGGCTTCCTATATTCGTTAATTTTCATCG
CACGGTATTTTAAACACGGGAAACCCGTCACCTTTTTTATTCCAACACCG
AAACACGGACAAAATGGGTCAATACCAAAACTCCGCCCTAACCTTGCGCC
ACACGGAGAGGCTATTATTGTTATTGTGAAATATTGCTCAAAGGAATTAA
TATCATATGGTGAGAACGAATGGAAAGTTATTTCAACAACGAAATAGGTA
CCATGAACACACAATATCCCCAGGTTGAAGATGAAAACATGTTAGATTAt
ttaatttcatatttttatttatttgttactTTTGTTGCGAGTTGAATGAA
ATTGGCGTTTGTCTTCACAGCTTGATATGTATTATTCATACGCTGTGACA
CTACGAAATGAGGTGTAATGACACAGGGCACTTTTCAATTatttaaaata
tgtaaaatgcactataaattcaattttcaacactCGCTTCAGTGGGCATT
CCATCTTTCTACAATTGCTGCAAGTGCCTCAAACGAGGgatggtttttcc
aaatcgtgGGTTGCATCTGCGGGACGTAGAGACGTAAAAATACTTTACTG
TGTAAAAGTTAGAGTGGGAGCATTATTAGagctttataataaaaaaatta
aaaaaattaaaaattcttcGGTGAATCGATGTAAAACTCTAGTTTTCAAA
GATTCAAGACTCAGGC
Run BLAST on NCBI

protein sequence of TCONS_00052083-protein

>TCONS_00052083-protein ID=TCONS_00052083-protein|Name=TCONS_00052083-protein|organism=Clytia hemisphaerica|type=polypeptide|length=443bp
MRVLCVILILESYIIGVVLANTGARFTDTKNNKKIAAGEDDKYVSLKGLT
EVQCVGHCTLTDDCHSVNHHSDDQICLVIDEPLEGDSHLIDAHGWKYFKK
TRITKEDEISTKNNFEITNAFKPNPNKIVNFLPYLKEEWELTFNIIIYGK
SDQNKSGIFTMAKELTAQNKLLNIYVITSTDQKIRVYTKEMSYSFKFEYN
KWHTIKFTQRSSPINDPLQTHVRSLVVDGMYVNKMLIKLPEVSENLICFA
GSPHHLALNGRVRNLTFKQDGLPHRNIRPKHNYISNNIDPWYREWYVRFT
LVIHSIDFTDSSSYQRKGYHNVIHFTTGVNDGSMGTRIVSAFIKDTGTTI
LGAEYMANGQWKQIFVSYTFDLDREYRIEFKSFESQNNPAANIIQFWVDG
LMNPNTVTNFQPIIQGTVIIYVSDPWYKPADATLFGLEYGPLE
Run BLAST on NCBI

transcript from alignment at scaffold_21:107590..111950-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052083 ID=TCONS_00052083|Name=TCONS_00052083|organism=Clytia hemisphaerica|type=transcript|length=4361bp|location=Sequence derived from alignment at scaffold_21:107590..111950- (Clytia hemisphaerica)
TTCATCCGCGATAGTGAAACATCAAAAAATACCATAGAAAGAACTTAAAG ATTGAATAAGATTTGAAGCGAGAAATATTGAAATCAAAATGAGGGTTTTG TGTGTAATTTTGATATTGGAATCTTATATCATTGGAGTAGTTCTTGCAAA TACCGGGGCTAGATTCACCGATACAAAAAATAACAAAAAGATTGCCGCCG GTGAAGACGATAAATATGTCAGTTTGAAAGGTTTAACGGAAGTGCAATGT GTTGGTCATTGCACATTAACTGATGATTGCCATTCTGTGAATCACCATAG TGATGACCAGATCTGTCTGGTGATTGATGAACCATTGGAAGGTGATTCTC ATTTGATTGATGCTCATGGATGGAAATATTTCAAGAAGACAAGAATAACA AAAGAGGTATAGCTGATACTTTTTATGCTATAGTCAAATACAAATTACCA ACTAAAACTAAAACCAAAGCCAACTGTTTTTTTTTGCCGAAAATAGTTTA CAGCCGGTAGAGTTTACCAGTCTTCTTCGGGACTCTACTGTTGATTTTTT CAGTATACCGCTATTACGGCTGTGAACTCTGCGCATATAATATTCTCCCG ACTTTACTATCCCTGTAAACATCGTCTACTATTATTTTAATATCATGGGA CTTTGGAAACTATTCTCCTTCTTGAAATTGAATGAAGGGGAAATGATTTT GGGAGGTTTGAAATATTAAAGTCCCCAGCGCTTACTTCCCTTTCTCTTAT CAAAGAGACCCGGAGTGCTGGGTATGTGCGGACGGAGAGTTGCAAAAATT AGAAAATTTTTAGTTTTAAAGAAAGAATTGTGAAAAATCCCACCTATGGA TAGGACGTTTTTCAAAAATAGAAGAGAATTTTCTAAGGGTCATTTTTTCA CTAGGATTTGGTCTCTCCTAAGCCTTTTCCTTAGTTATAGGAGGTCAAAG AGACGAATATGACCAAATCATCGATTCTCAATGCTCTTAAAGTCTTAAAT GAAATCTTTTTTTGATTCAGGATGAAATCTCAACAAAGAATAACTTTGAA ATAACAAATGGTAAGTCTACTGAATAAACTATGAGCATCTTAAATCTGTG TTACTATCCTCCTTTCTTAAGCTTTTGAAGCAATATTTCTTAGGTTACGT GTATACCAAAATTGTAATTCCGTTTCAAACATTTTTGACTACATTGAGAA TCTCCTATCCCGAGAGTCGCACTTCTACTTATCACACTTGTTCGGCAGAT AGTTGGTCAATGTGCATTATTCACTTGACTGTAAGTAACATTAGAGCTCG ACTTAAGTTTACGCTAAGATAATTAAATTTTCTTCATTAGCGTTCAAACC AAACCCAAACAAGATCGTCAACTTTCTACCTTACCTAAAAGAAGAATGGG AATTAACTTTCAATATCATAATCTATGGAAAATCAGATCAAAACAAAAGT GGAATTTTCACAATGGCAAAAGAATTAACTGCTCAAAATAAATTGTTAAA CATTTATGTTATCACTTCCACCGATCAAAAGATTCGAGTTTACACAAAAG AGATGTCTTATTCTTTCAAGTTTGAATACAACAAATGGCATACTATCAAA TTTACCCAACGTTCAAGTCCGATAAATGATCCGCTACAAACCCACGTAAG ATCTCTGGTCGTTGATGGTATGTACGTCAACAAAATGCTTATCAAACTAC CAGAAGTCTCGGAGAACTTGATTTGTTTTGCTGGTTCACCTCATCACCTT GCGTTGAACGGTCGCGTCCGAAATTTGACGTTTAAACAAGATGGCCTTCC GCATCGTAAGATTCTTTGTTTTTATTGGATGTTGAGAAATTTAGAATTGA ACCAAAACCCCCTATAATACAACTTTTCGACCGTAGCCACCAATTGCCGC GCGGGCATTTTTTGTCCGCTTTATCTCACTAAAACCGTCCCAGTCCTTTT TTCGCACCTATAGACGATAGAAAAATGTGTCAAAAAAGGATTGGATCGAT TTTAGGGGGTAATTAAATAATTTAGTGGCACGCGTCTGACCGCGCGACTA CGGTCGAAAAGGTGTATCAATCAAGTATTTTACTTAGATTTTAAGAAGTT AATTTATATATAAATACTTAATAAATGACTAAATGACTTTTTTAATAGAG AGCACGTTTTTGATTCCTGCGAGTTTGGTCTATGTAATCTTAAGTAGAAG TGTAGCCGCATAACTTGTAATCACTCAAAATTGTTCGTTATAAGAAAACT TTGATTGCATGGTCAGGTGTATGTATAAAGGCTCTTTATTATTTTTTTAA TTTATGTGTTGGTAAGTTTCACAAACTTTAGTGGCTTCAGAAAGATTTTA GCTTCCAAGATTTTAAGCCTAAAGGACATTCTTTCACAACAATCCCTGTA AAAATAATAATTTCTTTATTTTATTGTTTCTAGGAAACATTCGACCAAAG CATAACTACATCTCAAACAACATCGATCCTTGGTACAGAGNTCACAAACT TTAGAGGCTTCAGAAAGATTTTAGCTTCCAAGATTTTAAGCCTAAAGGAC ATTCTTTCACAACAATCCCTGTAAAAATAATAATTTCTTTATTTTATTGT TTCTAGGAAACATTCGACCAAAGCATAACTACATCTCAAACAACATCGAT CCTTGGTACAGAGAATGGTACGTGAGGTTCACTCTGGTGATACACTCAAT AGATTTCACCGATTCTAGCAGTTATCAACGGAAAGGTTACCATAATGTCA TTCATTTCACAACTGGAGTAAACGACGGGTCAATGGGCACAAGAATCGTT TCAGCATTTATCAAAGATACCGGGACAACCATTTTAGGTGCAGAATATAT GGCTAATGGGCAATGGAAACAAATATTCGTAAGTTACACGTTTGATCTTG ATCGCGAATATCGTATTGAATTTAAAAGTTTTGAATCTCAAAATAACCCT GCAGCAAACATTATTCAGTTTTGGGTTGATGGATTAATGAACCCAAACAC TGTTACTAATTTCCAACCTATAATTCAAGGGACAGTGATAATATACGTCA GCGATCCTTGGTATAAACCTGCTGATGCGACACTTTTTGGTCTTGAATAT GGACCATTGGAATAATAAAAAACTTGAGTCCAATTGTTTTATCGCGCACT CTTTTTTTTGCTACTATGTGGAAAACATGCCCGAGGGGGGCACTGGCCTT GACGACCGACGGAAACGTGATTTGACCCTGTCAAATATCTCTTGAGTCTG AAAAAAGGGACCTTGATCAGCGGCACATCCCCTTAATTTTGCCTAAGTAA CTCCTCCCCTGGGATACCATGTCAGTGCAAATAGAATAATTCCCTTCTTG GTAGCTTCCACATTGTAGCAAAAAAATTGTACATTTAAAGCGATTCAGAA CAGGAACTTTATAAACGATGAGCAACCTCTATATCAAAATATAGCAAGAG GGATATGTGCAGCCTACAAGCGAATGGACTCTGATGATAAATAAAATTAT AAGGCTTCGGACAAAAACCTCCACTAAACTTAAAGTTAAAGAATTGATTG AACTTTGATTTCAAAAAAGAATTCTTCTAAAACCAAGAGATGTAAGCGAT GTAAACGAGTGGAAATGGAAAGAGTGCTACCAACATCATAATTTTTCTTT AATCCACCGACAACACCGGCTTCCTATATTCGTTAATTTTCATCGCACGG TATTTTAAACACGGGAAACCCGTCACCTTTTTTATTCCAACACCGAAACA CGGACAAAATGGGTCAATACCAAAACTCCGCCCTAACCTTGCGCCACACG GAGAGGCTATTATTGTTATTGTGAAATATTGCTCAAAGGAATTAATATCA TATGGTGAGAACGAATGGAAAGTTATTTCAACAACGAAATAGGTACCATG AACACACAATATCCCCAGGTTGAAGATGAAAACATGTTAGATTATTTAAT TTCATATTTTTATTTATTTGTTACTTTTGTTGCGAGTTGAATGAAATTGG CGTTTGTCTTCACAGCTTGATATGTATTATTCATACGCTGTGACACTACG AAATGAGGTGTAATGACACAGGGCACTTTTCAATTATTTAAAATATGTAA AATGCACTATAAATTCAATTTTCAACACTCGCTTCAGTGGGCATTCCATC TTTCTACAATTGCTGCAAGTGCCTCAAACGAGGGATGGTTTTTCCAAATC GTGGGTTGCATCTGCGGGACGTAGAGACGTAAAAATACTTTACTGTGTAA AAGTTAGAGTGGGAGCATTATTAGAGCTTTATAATAAAAAAATTAAAAAA ATTAAAAATTCTTCGGTGAATCGATGTAAAACTCTAGTTTTCAAAGATTC AAGACTCAGGC

Coding sequence (CDS) from alignment at scaffold_21:107590..111950-

>TCONS_00052083 ID=TCONS_00052083|Name=TCONS_00052083|organism=Clytia hemisphaerica|type=CDS|length=5328bp|location=Sequence derived from alignment at scaffold_21:107590..111950- (Clytia hemisphaerica)
GAAACATTCGACCAAAGCATAACTACATCTCAAACAACATCGATCCTTGG
TACAGAGAATGGTACGTGAGGTTCACTCTGGTGATACACTCAATAGATTT
CACCGATTCTAGCAGTTATCAACGGAAAGGTTACCATAATGTCATTCATT
TCACAACTGGAGTAAACGACGGGTCAATGGGCACAAGAATCGTTTCAGCA
TTTATCAAAGATACCGGGACAACCATTTTAGGTGCAGAATATATGGCTAA
TGGGCAATGGAAACAAATATTCGTAAGTTACACGTTTGATCTTGATCGCG
AATATCGTATTGAATTTAAAAGTTTTGAATCTCAAAATAACCCTGCAGCA
AACATTATTCAGTTTTGGGTTGATGGATTAATGAACCCAAACACTGTTAC
TAATTTCCAACCTATAATTCAAGGGACAGTGATAATATACGTCAGCGATC
CTTGGTATAAACCTGCTGATGCGACACTTTTTGGTCTTGAATATGGACCA
TTGGAATAACGTTCAAACCAAACCCAAACAAGATCGTCAACTTTCTACCT
TACCTAAAAGAAGAATGGGAATTAACTTTCAATATCATAATCTATGGAAA
ATCAGATCAAAACAAAAGTGGAATTTTCACAATGGCAAAAGAATTAACTG
CTCAAAATAAATTGTTAAACATTTATGTTATCACTTCCACCGATCAAAAG
ATTCGAGTTTACACAAAAGAGATGTCTTATTCTTTCAAGTTTGAATACAA
CAAATGGCATACTATCAAATTTACCCAACGTTCAAGTCCGATAAATGATC
CGCTACAAACCCACGTAAGATCTCTGGTCGTTGATGGTATGTACGTCAAC
AAAATGCTTATCAAACTACCAGAAGTCTCGGAGAACTTGATTTGTTTTGC
TGGTTCACCTCATCACCTTGCGTTGAACGGTCGCGTCCGAAATTTGACGT
TTAAACAAGATGGCCTTCCGCATCGATGAAATCTCAACAAAGAATAACTT
TGAAATAACAAATGATGAGGGTTTTGTGTGTAATTTTGATATTGGAATCT
TATATCATTGGAGTAGTTCTTGCAAATACCGGGGCTAGATTCACCGATAC
AAAAAATAACAAAAAGATTGCCGCCGGTGAAGACGATAAATATGTCAGTT
TGAAAGGTTTAACGGAAGTGCAATGTGTTGGTCATTGCACATTAACTGAT
GATTGCCATTCTGTGAATCACCATAGTGATGACCAGATCTGTCTGGTGAT
TGATGAACCATTGGAAGGTGATTCTCATTTGATTGATGCTCATGGATGGA
AATATTTCAAGAAGACAAGAATAACAAAAGAGGAAACATTCGACCAAAGC
ATAACTACATCTCAAACAACATCGATCCTTGGTACAGAGAATGGTACGTG
AGGTTCACTCTGGTGATACACTCAATAGATTTCACCGATTCTAGCAGTTA
TCAACGGAAAGGTTACCATAATGTCATTCATTTCACAACTGGAGTAAACG
ACGGGTCAATGGGCACAAGAATCGTTTCAGCATTTATCAAAGATACCGGG
ACAACCATTTTAGGTGCAGAATATATGGCTAATGGGCAATGGAAACAAAT
ATTCGTAAGTTACACGTTTGATCTTGATCGCGAATATCGTATTGAATTTA
AAAGTTTTGAATCTCAAAATAACCCTGCAGCAAACATTATTCAGTTTTGG
GTTGATGGATTAATGAACCCAAACACTGTTACTAATTTCCAACCTATAAT
TCAAGGGACAGTGATAATATACGTCAGCGATCCTTGGTATAAACCTGCTG
ATGCGACACTTTTTGGTCTTGAATATGGACCATTGGAATAACGTTCAAAC
CAAACCCAAACAAGATCGTCAACTTTCTACCTTACCTAAAAGAAGAATGG
GAATTAACTTTCAATATCATAATCTATGGAAAATCAGATCAAAACAAAAG
TGGAATTTTCACAATGGCAAAAGAATTAACTGCTCAAAATAAATTGTTAA
ACATTTATGTTATCACTTCCACCGATCAAAAGATTCGAGTTTACACAAAA
GAGATGTCTTATTCTTTCAAGTTTGAATACAACAAATGGCATACTATCAA
ATTTACCCAACGTTCAAGTCCGATAAATGATCCGCTACAAACCCACGTAA
GATCTCTGGTCGTTGATGGTATGTACGTCAACAAAATGCTTATCAAACTA
CCAGAAGTCTCGGAGAACTTGATTTGTTTTGCTGGTTCACCTCATCACCT
TGCGTTGAACGGTCGCGTCCGAAATTTGACGTTTAAACAAGATGGCCTTC
CGCATCGATGAAATCTCAACAAAGAATAACTTTGAAATAACAAATGATGA
GGGTTTTGTGTGTAATTTTGATATTGGAATCTTATATCATTGGAGTAGTT
CTTGCAAATACCGGGGCTAGATTCACCGATACAAAAAATAACAAAAAGAT
TGCCGCCGGTGAAGACGATAAATATGTCAGTTTGAAAGGTTTAACGGAAG
TGCAATGTGTTGGTCATTGCACATTAACTGATGATTGCCATTCTGTGAAT
CACCATAGTGATGACCAGATCTGTCTGGTGATTGATGAACCATTGGAAGG
TGATTCTCATTTGATTGATGCTCATGGATGGAAATATTTCAAGAAGACAA
GAATAACAAAAGAGGAAACATTCGACCAAAGCATAACTACATCTCAAACA
ACATCGATCCTTGGTACAGAGAATGGTACGTGAGGTTCACTCTGGTGATA
CACTCAATAGATTTCACCGATTCTAGCAGTTATCAACGGAAAGGTTACCA
TAATGTCATTCATTTCACAACTGGAGTAAACGACGGGTCAATGGGCACAA
GAATCGTTTCAGCATTTATCAAAGATACCGGGACAACCATTTTAGGTGCA
GAATATATGGCTAATGGGCAATGGAAACAAATATTCGTAAGTTACACGTT
TGATCTTGATCGCGAATATCGTATTGAATTTAAAAGTTTTGAATCTCAAA
ATAACCCTGCAGCAAACATTATTCAGTTTTGGGTTGATGGATTAATGAAC
CCAAACACTGTTACTAATTTCCAACCTATAATTCAAGGGACAGTGATAAT
ATACGTCAGCGATCCTTGGTATAAACCTGCTGATGCGACACTTTTTGGTC
TTGAATATGGACCATTGGAATAACGTTCAAACCAAACCCAAACAAGATCG
TCAACTTTCTACCTTACCTAAAAGAAGAATGGGAATTAACTTTCAATATC
ATAATCTATGGAAAATCAGATCAAAACAAAAGTGGAATTTTCACAATGGC
AAAAGAATTAACTGCTCAAAATAAATTGTTAAACATTTATGTTATCACTT
CCACCGATCAAAAGATTCGAGTTTACACAAAAGAGATGTCTTATTCTTTC
AAGTTTGAATACAACAAATGGCATACTATCAAATTTACCCAACGTTCAAG
TCCGATAAATGATCCGCTACAAACCCACGTAAGATCTCTGGTCGTTGATG
GTATGTACGTCAACAAAATGCTTATCAAACTACCAGAAGTCTCGGAGAAC
TTGATTTGTTTTGCTGGTTCACCTCATCACCTTGCGTTGAACGGTCGCGT
CCGAAATTTGACGTTTAAACAAGATGGCCTTCCGCATCGATGAAATCTCA
ACAAAGAATAACTTTGAAATAACAAATGATGAGGGTTTTGTGTGTAATTT
TGATATTGGAATCTTATATCATTGGAGTAGTTCTTGCAAATACCGGGGCT
AGATTCACCGATACAAAAAATAACAAAAAGATTGCCGCCGGTGAAGACGA
TAAATATGTCAGTTTGAAAGGTTTAACGGAAGTGCAATGTGTTGGTCATT
GCACATTAACTGATGATTGCCATTCTGTGAATCACCATAGTGATGACCAG
ATCTGTCTGGTGATTGATGAACCATTGGAAGGTGATTCTCATTTGATTGA
TGCTCATGGATGGAAATATTTCAAGAAGACAAGAATAACAAAAGAGGAAA
CATTCGACCAAAGCATAACTACATCTCAAACAACATCGATCCTTGGTACA
GAGAATGGTACGTGAGGTTCACTCTGGTGATACACTCAATAGATTTCACC
GATTCTAGCAGTTATCAACGGAAAGGTTACCATAATGTCATTCATTTCAC
AACTGGAGTAAACGACGGGTCAATGGGCACAAGAATCGTTTCAGCATTTA
TCAAAGATACCGGGACAACCATTTTAGGTGCAGAATATATGGCTAATGGG
CAATGGAAACAAATATTCGTAAGTTACACGTTTGATCTTGATCGCGAATA
TCGTATTGAATTTAAAAGTTTTGAATCTCAAAATAACCCTGCAGCAAACA
TTATTCAGTTTTGGGTTGATGGATTAATGAACCCAAACACTGTTACTAAT
TTCCAACCTATAATTCAAGGGACAGTGATAATATACGTCAGCGATCCTTG
GTATAAACCTGCTGATGCGACACTTTTTGGTCTTGAATATGGACCATTGG
AATAACGTTCAAACCAAACCCAAACAAGATCGTCAACTTTCTACCTTACC
TAAAAGAAGAATGGGAATTAACTTTCAATATCATAATCTATGGAAAATCA
GATCAAAACAAAAGTGGAATTTTCACAATGGCAAAAGAATTAACTGCTCA
AAATAAATTGTTAAACATTTATGTTATCACTTCCACCGATCAAAAGATTC
GAGTTTACACAAAAGAGATGTCTTATTCTTTCAAGTTTGAATACAACAAA
TGGCATACTATCAAATTTACCCAACGTTCAAGTCCGATAAATGATCCGCT
ACAAACCCACGTAAGATCTCTGGTCGTTGATGGTATGTACGTCAACAAAA
TGCTTATCAAACTACCAGAAGTCTCGGAGAACTTGATTTGTTTTGCTGGT
TCACCTCATCACCTTGCGTTGAACGGTCGCGTCCGAAATTTGACGTTTAA
ACAAGATGGCCTTCCGCATCGATGAAATCTCAACAAAGAATAACTTTGAA
ATAACAAATGATGAGGGTTTTGTGTGTAATTTTGATATTGGAATCTTATA
TCATTGGAGTAGTTCTTGCAAATACCGGGGCTAGATTCACCGATACAAAA
AATAACAAAAAGATTGCCGCCGGTGAAGACGATAAATATGTCAGTTTGAA
AGGTTTAACGGAAGTGCAATGTGTTGGTCATTGCACATTAACTGATGATT
GCCATTCTGTGAATCACCATAGTGATGACCAGATCTGTCTGGTGATTGAT
GAACCATTGGAAGGTGATTCTCATTTGATTGATGCTCATGGATGGAAATA
TTTCAAGAAGACAAGAATAACAAAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032988XLOC_032988Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052083-exon-scaffold_21-1575043694:111545..111950TCONS_00052083-exon-scaffold_21-1575043694:111545..111950Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1575043694:110891..110930TCONS_00052083-exon-scaffold_21-1575043694:110891..110930Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1575043694:110146..110610TCONS_00052083-exon-scaffold_21-1575043694:110146..110610Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1575043694:107590..109344TCONS_00052083-exon-scaffold_21-1575043694:107590..109344Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1510915933:111545..111950TCONS_00052083-exon-scaffold_21-1510915933:111545..111950Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1510915933:110891..110930TCONS_00052083-exon-scaffold_21-1510915933:110891..110930Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1510915933:110146..110610TCONS_00052083-exon-scaffold_21-1510915933:110146..110610Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1510915933:107590..109344TCONS_00052083-exon-scaffold_21-1510915933:107590..109344Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1491911889:111545..111950TCONS_00052083-exon-scaffold_21-1491911889:111545..111950Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1491911889:110891..110930TCONS_00052083-exon-scaffold_21-1491911889:110891..110930Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1491911889:110146..110610TCONS_00052083-exon-scaffold_21-1491911889:110146..110610Clytia hemisphaericaexon
TCONS_00052083-exon-scaffold_21-1491911889:107590..109344TCONS_00052083-exon-scaffold_21-1491911889:107590..109344Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052083-proteinTCONS_00052083-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:107590..111950 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.0389448 0 0 0.0428731 0.225961 0.12918 0.162396 0.123635 0 0 0 0 0.585341 0.788768 0 0 1.69515 2.18865 0.685851 1.72011 1.55269 3.49639 0.41516 0.0301845 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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