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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052230 ID=TCONS_00052230|Name=TCONS_00052230|organism=Clytia hemisphaerica|type=transcript|length=677bp
CTTGGGAATGAGCTATTGCTTCAGGTTTGGCCTTTAATTAAGAACAagGG
TTACAAACTTGATTCAATTAGTTGCTACTTATAGCATTTGGGAAAAATGA
ATCTTAAGATATGTTTATTATCATATTTTGTGGTAGTAGCAATGCTTCAT
AAGTTCTCACAAGcGATGAGTGTGGAAGATATGTGGAAAGTGATCGAAGA
CGGTGACGCTGAACGGGAAAAGAAACATTTGCCCATTGACGGGGCCGCTG
ACCGTGAGATTGAACCAGGGCACGAGCATCCAAAAATCATCGAATATGAT
ATCTCGTACAACGAGACAGAGGAGCAAGCGAAACGCGATTTCATTGACAA
AAGAGGATCTGATTTACCCACCCTAATCTCATGGCATCTCTCCTTGTGGA
GTACTCGTATAGTTCCGTGGGTGCTTGACCACTCAGGAGGGTATTTCTCA
GTTGAGGAGCAGAAAATAATTCAAGAATCATTCGACCAGATTTCGGGGAA
AGTTTCATGTTTATCATTCCGTCAAAAAATATCGAGTGACAAACAATGGC
TTAGAATCTATAAGGGTGCTGGATGCCATTCAGGCATTGgtcgaaaatat
tggacaacATCTTCTACCGATGTTTCGTTGGGAAATGGCTGTATCAAAAC
TTCCATTGTTGTACATGAGTTCCTACA Run BLAST on NCBI protein sequence of TCONS_00052230-protein >TCONS_00052230-protein ID=TCONS_00052230-protein|Name=TCONS_00052230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
MNLKICLLSYFVVVAMLHKFSQAMSVEDMWKVIEDGDAEREKKHLPIDGA
ADREIEPGHEHPKIIEYDISYNETEEQAKRDFIDKRGSDLPTLISWHLSL
WSTRIVPWVLDHSGGYFSVEEQKIIQESFDQISGKVSCLSFRQKISSDKQ
WLRIYKGAGCHSGIGRKYWTTSSTDVSLGNGCIKTSIVVHEFL Run BLAST on NCBI transcript from alignment at scaffold_213:244777..257963+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052230 ID=TCONS_00052230|Name=TCONS_00052230|organism=Clytia hemisphaerica|type=transcript|length=13187bp|location=Sequence derived from alignment at scaffold_213:244777..257963+ (Clytia hemisphaerica)
CTTGGGAATGAGCTATTGCTTCAGGTTTGGCCTTTAATTAAGAACAaggt
aagaacaattttaggctcgaagtgccaaaaaatagGATCAGATTTGcgtc
attaaaaatttactggttcttataaaaaagagtgtgaTGTTATTATTGCG
GACAGATAGCCAAGAACATAAATCTTGTATCCAGTGTTTACATCAATTTC
ATGTCACCGGAAAAACACGATTGTTTAGCTTTTAGCACTCTCTTCATTAA
GTATTCATTCAAGTTTTATTGAAATGGAAATCTAGAAATGGTGTGCGAAT
TTTTGTTTGGAAGGGTTTGTTACTTATTGAGATTTCTACAGGTCTTTAAT
TGTGTTAAGTAGGGTTTGTAGCTTATTTGAGATAAGGTGCTAAATTCTAC
TTTCATAATTACCAATAAAAGACGagcatctttattttattagcAACTAA
AGCTTTCGTCAAAGTGTAAATTCAAAGTCACATTAAGAAGTTTGGGACTT
CTATTGATCTGCGAATTTAATGTGTTGgtttataaaatcttttttaattt
aatatttttcaatttttggaaaatatcgaGTATAATAGCGTTGAATAGTA
GCGTGTAGTAGCAACCGTACATAGTGAaaaggtagagcattcgacgGTGT
ACACGGTTCACGGTTCAATCGCTGGCCGGGTCACACCAAATACTTATGTG
GTACAAAGTGATAAttgatacctctctgcttgatgttcagcaatcaagag
aatgatcaagggttagtggagcaatccaggaaTAAAGAGTGGCGGtttcc
cctaccttcgggtggaCAGCTGTAGAAAGCGCCCATCTTAATATGGATGG
GAGTTCTGAAAGCATTGCTGATTATTCTCTATTGTGTTTAAGACCAGTAG
CCTTTTCGTCCAAACGTTTctaattttaatcaaaaaatttaaaagtcatA
AACCTTGAGTATATGGCCTGTGTTGTAGTACTGTATCCAATCTCTATTCT
TAACTTTGGGACAGTCTAGAAACTTTAAAAAAGGTcagatttggctaaaa
tttgggATGATTCTTGGATGTTCTTTTCACCAAAAACGATGCTAAAACTT
TGGGGTACTGAAGGCCTAAAACTGTTTGGATTCAGCGCTAAAACTTGTCA
CACTTGCTCTGAGGCTATTTTTTTTAGGCCTCGGGAGGAGTTCTGATTGC
TAAAATTGTCCCTataggataaattttcgcggggatttaatttcgcggat
ggcactaatggaaccctggtaaaaattcttgataagttcttgataagatc
ttatcaagaaactttgcAAGTTCTTGTTCAGTTTCTTACTACGAACGTGC
CAAGATCCTttaagatctttaaagatctgaTAAGATTCTTTTGTGAGATG
CTAATAAGATTCTTGTCTGTTAAAGCGATTCAAGATTCTTACCGAATCTT
AGAACAACTATCCTTGGATGAAATCTTTAACTTAACCACGCGAGATAGTT
TTGATCAGCGTTACATCGATTCAAGATTCTTACCGAATCCTAGGTCAACT
ATCCTTGGTGACTAGGTGACTAGCCTCGGTGAGCTCCAAACCCCTGACCC
AAGAACTTTTGTAGTGACGAGTAAACAGTCtaactgacgagttaggctaa
ctgtctaGATCGCTATTTATCCGGTAATGTAGTCCACCCCATTGTATTCT
TCGCCCTTACTTGTCAGCGCTAAATTACTCATTGTGGTGTATACAATATA
GACTCTGTTGTGTAGCAATCTACTAATTTGCCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATATG
AAATCtacatattttgtagaataatAATTCTACCCTATATACCCTATTTG
TATGGTTGTatgtaaatttgatatttaaattctttaaaaaaattcaaaat
cgaaGATTTTATCATAACCACAAATTTACGAGTTATTGTGTTTATTCAAC
AAGATTCTTAACCCGAACTTAATAAGAAACACTAAGAATCTTAAAGTTTC
TTTGCATATTTGTCaattaagatttggaaagtctctttataagaacttga
taagaaacgctaagaatcttaaagtttctttgcatatttgtcaattaaga
tttggaaagtctctttataagaacttgataagaaacgctaagaatcttaa
agtttctttgcatatttgtcaattaagatttggaaagtctctttataaga
aacacaaaGAATCTTAAACTATTTTATGGTTGCAAGATTTCATAAGATTT
CATATAAGATTCTTCTTAAGAACTTAATAAGAAACTTAAATTTTCTTACT
ATGAATGTGTGCGAAGAATCTTGACAATTCTTAACAATTTCTTGACacga
tctttaaagatctttttgtaataagaaattttcaagattNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAatctttgtaagatcttacaaagatCTC
TTAAGATTCTTACTtgttaaagatctttaaagatctttaacgatcttttc
agatcttatcaagaatttttaccaggaAGCAGTGCTGATTGGTAGACAAT
ACTTTCATGCTCTTTTGATATTTACTGCCAAATTTGCATGTTGGTTGTCA
ATGATGCTTCTTTGGTGATagtaaacattaaaaaagtaatttatttgaca
tttttgagattttttttaatatatcgCGGAAAGGCCTTTCCAGATTTcta
ttgggacttaatttcgcagatGACACACGAATTTTAATCTCCGCGAAATT
TTGTGTAGTCGAGTCCAGTGCGGTGAACACGCTATCGGATTTTTAAATAC
TCGATCTCAACTAATATATGATGATATTTATTGTTTCAATTAGCCCTCGG
AACGATTTGAAAGTTACTGCAGAAGTCAAATTACGCTACTTTTTTATCGA
AAGTAAAtttgttgtaaaaatatttgaaatcggTACTGTATTGTGAAAGA
AAATTATAATCACAGATGAatgaaatttgattctttttcagtttaaaGAA
GGCTGGTTAAATAAATAACCCTGATTTCTCATTTGTTCCTTACGGTTTTT
ATTAATATGCTAATGTTAATGCGAGAAAAGTTTAATAAGTGAGCTTTAAG
CTTTCTATCTATTGCGGTTTGTCACTGTTTCAGCATAGCTGGTTTTCATT
TAAAACACCCACGGAATTCTTTACAGTATACCTAACAGTTATATAACCat
ggatatttttttaaataaaattgactCTCACTCGCTCTTTTTCTCTCTAT
GAATTTAGGATGGTAATATCACGTACGCATTTTATAGAACTGACAACTTA
TCTTTAGTGGTAGTATGGTTTAGCGAGACCTCCTTCTTCGATATGTGATT
TTCCTCATTTCTTAGAGTCTAGAATATGGAATAGGGGACGCAAGTTCTGC
TTTGAAACGGGTTCACTTTAGAAGAAGGCGTGACTTTTTACTAGTTAGGA
TTGTATATTTCTTTGTATCCCAGAAACCTGGTGTCGACAATCCGTTTGTT
GAATCTGACGTTTCCGATTTTTATGGTGGTTATGGCTTTAGCAACGGATT
TTATTCCCAGAAGGAGGCTTGGCACAGTTTTCTGTACTTATGTTTTGATT
GCTTAAGAAATCTCAAAGAAAGAAATCATATAACACGTAATGACATTTGG
GAATTCTCTAGAGATGATGTGCCCATACTTCGGACATCGCCCTCCTTCGA
ATGTTTCAATGGTGTTCCCTTTACGAAAAAGGAAGTCGTATTATAGAGAC
AAATTTCGAGATAAAAAACTACCAATATCTTCTTTCAGGTATCTTGAAGT
CACATAAAAAGGGAAATtaatatcgaaaaaaaaatttacttcaaaaaaca
ttttccacGATCAAAGTTCCTTTTTGGTTCTGATCAAAAACTACCGGATG
ACCGTTGACCCAGAAAAAAGTATCAGGGTTTGTTGGCTAACTGTGTCCGA
AATTATGTGAACTTTTAatgaattcgttttttttttattgtaaagaggaa
aggcaagCTTGAAATTtggtaggctacgtcatatctgcCTTTGCTCCGGG
CGTAAAACTCTTCCTAAgacctaaaagcctggagctgtctattgtgtaga
ctagaaatttggtatataactttttaaatttgagaaCTGGTTGAATTTgc
ttttgaaaaagtccaaaaacacgtcaaaaatggGGTATCACTGTGCTATT
GAGAATCAAACCAGGATTTCTCTAAAGAAATATGAAGTACATTTAAATCT
CGCTCTCTTTTTACCTGGAGTTTTGCACTGAGCCAATATAAGAATAAATT
TATGAAAGCTCCGATGaactcccagctggcacacaacgttgtttctacgt
ttttctaacgttcacaacgtccatataacgttagataaacgttgaaacaa
cgttgtgtgccagctgggctggTATAAAATTCATTTACGTTACCATCTTC
AAGCATTCCTCTTATTCAAGatagagtgatatcgtttgcttactcatcaa
ttttaatttacaagcttttctcatTGAATTGACagggatgtggagcaaga
ttgatcagaaaagaaatttttttgtttgtttattcagcaccaAATCGAAC
ACAATTTAACAATACAGTAGGCAAACACCgacctgatatgaaacgggaac
actaatGTAAAACTTTAAAGTCTAGTCACTGGGTGCGTGGTCAAGTGGTA
GCGTATTCTCCGCCTGGCTGTGGATATTTGTGTATTCAAGCCCCACGGAA
ATTATAATGCATAGCGAGGTCGTCTCTTGTATCGCCAATCGATGCAGGTG
CAATCTTGCGTCCAAGAAGAGCGAGCTCTTAGGATGGATGGGACATTGCA
CCCTAACATAAATAGTTCgataaaagaaaactttccGATAATGTATACCA
AAAAAATATGGTATTGTGAAGAATTTTTATAGAATCCTGGAGTTATTAGT
TTTTTCGCANTTCgataaaagaaaactttccGATAATGTATACCAAAAAA
ATATGGTATTGTGAAGAATTTTTATAGAATCCTGGAGTAATTAGTTTTTT
CGCATTTGAGTAGAGGCAGCGAAAGAGTGTTATTAAAATTCTAATTTCTT
TTCGAAGATAATAATCTCATACTTTCTGCATAAGTAGTAAAAGTATTTTG
CTCAAGGTGGGTATTATTAGCTCTCCAATATAGCTCGCCTGGTATTTCAG
TTATGAAAAGGGGCATTTTCTTGAAGGTATTTGGATTAGTTAATACTAAT
GTGGATTTTTTAGAGTGTTTTATCATTCATTTGATCAGCGCTCATTCTTC
AAAGGTTTCAACGAATTAAAGGAGAAAGGTATGATACAGTGTCATCATTC
GTGAAGATTTTTTTGGTGCAGGAAAAATATGGAATGGAATGAGGTTGAAG
TCGTTTGTTTATGTTTGTAGAAAAAAAGAGTGACGAGTTATGTATACTGT
TGTATACTGTAGGACAAAGATTTCTCCTGTCTTGGCGTTTGTTACTCTTT
GTTGAAACTCTGCTTAGAAGTATGTTATAGAGAAGTATCAAACAATATCA
CATCTGCGTCTTAAGAAGCTTAAAGAGatcattaaaaaaagtttaacaaa
agACTCCTCCTCGTATTAATGAACTCGCTTAAATGttttatatgaaaaat
gaaTGGTAATCTATATCTCGGCATGATATTTTTCCTATAATCCTACCTAT
ATAGATAGTATTAAACTACGGATTAAGTGCTATATTGCGNTGATATTTTT
CCTATAATCCTACCAATATAGATATTATTAAACTACGGATTAAGTGCTTT
ATTGCAAATTCGAATATTCTAGTGAAGCCGAAGTAGCTAGAGGCCGGTAT
AGTTTCTTATACAAGATAGTGACGACCAGTgcaatgatttttatgaaatt
tctgGAGTTGAAATTATCtatttaaagtctgttcacgataagtgtgcact
cttttttcttttacctataacttttgaaggaattcttcaatctttagaaa
tttggtatcattggaaagatattagtgagtgaaacaatttgaaataaaaa
aagtctttaaaaaaattataaaaacgaagatgaaaataaagaagagaaaa
atgaagatcttgtagaaaagtgctataactttcattttcactggagagat
tctttgatcttagaaagtcatcactgtgaagaaatttcactaagatgttt
attcaaaataaagttatgatacataggtaataagtgattgaccccaaaaa
acagcaaaaaaactgcagaaaactgcagaaaacagcgtttttagacgtca
attaaagtctgttcacgataagtgtgcactcttttttcttttacctataa
cttttgaaggaattcttcaatctttataaatttggtatcgttgggaagat
atttgtgagtggaacaatttgaaataaaaaagtctctaaaaaaattctaa
aaacgaagatgaaaatgaagaagaaaaaaatgaagatcttgtagagaagt
gctgtaactttcatttttattggagagattttttgatcttaggaggtcat
cactgtgaaaaaatttttctaaaatatttattcaagataaagttatgata
caaagtttataagtgattgaccccaaaaaacagcagaaaacaggagaaaa
cagcgtttttagacgtcaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttg
agaaattttttcacagtgatgacgttcgatgatcaaggattcgcttcagt
gaaaatgatagttatagcacttttctacaagatcttaatttttttcttct
tcattttcatcttcatttttagaacttttttatcgatttttttactccaa
attgtttcactcactaatatctttccaatgataccaaatttataaagatt
gaagaattccttcaaaagttataggtaaatcaaaaaagagtgcacactta
tcgtgaatagactttagcttataactttgtttaatatcttttgactgaat
tattatttttgagaattttttcacagtgatgacgttcgatgatcaaggat
tcacttcagtgaaaatgatagttatagcacttttttacgaaatcttcatt
tttttcttcttcattttcatcttcatttttagaatttttataaagatttt
tttattttaaattgctacattcactaatatctttccaatgataccaaatt
tacaaagattgaagaattctttcaaaagttataggtaaaagaaaaaagag
tgcacacttatcgtgaatagactttaaattgGTTTTGCTTTATGAATTTG
AGCTTTTTGTATGTGATTGTACTAAACCTGACTTTAAGTTTTTTACCTCA
AAAGGATCAGCCCCGGAAAAACCAAATAGTCTTTTAAGAGAAACCTTTTT
GACGGTCAGCTCTTATTTTTTCAGTACTTTgcttttcaaaatgttcttat
tcttattctttacttttatCCTTATTTAGAGACCTTAACCCTTAGTTTAG
TAAGGCTTAGGATTCTTCTTGCATTGTTCCTGGTCCTTTTGTATTTTGTG
AGCCCTATGCTCTTACAAAATTGTTCTCAATGAAAGAGAAAGACTGTACT
ATTAGACAGAAAGCTAGAAAATCTAGCTCGGTAAAAATATCCAGATATTT
TTCAACAGAGAAGGGAGGTAGACCAGACCGATCTCTGTATGTAGTCTATG
GAAAAATTCAATACAGGCTTATCCTATGTCAGTATAGCGCGTTCATAAAT
TTTATCTTCTTTTTACAGGGTTACAAACTTGATTCAATTAGTTGCTACTT
ATAGCATTTGGGAAAAATGAATCTTAAGATATGTTTATTATCATATTTTG
TGGTAGTAGCAATGCTTCATAAGTTCTCACAAGGTATGTTTGAGTAAATT
TCTATCAATTCCATTATCATCActcagatttcaaaaatatttaaccGCAA
TATTATACATATCATACATCTGATGATCGTCTCTGGAGCGAAACAGTCTG
TAatgttttaattctttaaagaaaaataaattttgaccgCAATATTATAT
CAACACCCTTAAACACCCTAGCGCCATAAAGGAGTTGGTTACGATTTTAT
TTGGGTCATATGGTTCTAAATTTCTGTATTTGTGAGCTAGCCGATACctt
tatacatttttttgcagTGTTCCAATTAAAGTTCGATATTGATATCATTG
ATCATAGAGGACTATCCGAAACTTCTTTCAGTTCTAGTAACGgcgattga
cgtcaaaaatgtcccactttttttgtatttttgtccgTCAATGACGAgcg
tctttctttttaatttaagcGATGAGTGTGGAAGATATGTGGAAAGTGAT
CGAAGACGGTGACGCTGAACGGGAAAAGAAACATTTGCCCATTGACGGGG
CCGCTGACCGTGAGATTGAACCAGGTAACGTTTCACATTCActcaacgtt
catataacgttaagACATGCCTCCGCGAGGAGGCCCTCAGCGGTTTGTGG
TTTggtcaaaatcagtttgaaTACTGAAAGAATACAATTATTAGCACATA
CTTAAGTTTTCCTCGATATGATCCTCCCTTACATCTACTTGTTTCAAAGA
AACGCCCCTCCTAGAGgggaggcgtttattcgaatggggcgtttattaaa
aaattttcttttatggAGAAGCGCTTATTCGAGGGGTCGTTTATTCGAAG
TGGCAACGTGATCTATGGTTTCAAATATCATGATCGATGGGAAATGACGT
ATTCAAGGAGTCCTCCAAGGGCCTCCATAAGCGCACTGCGATCGCTTCTT
TGCTATTGGtcggaagaaaagaaaaacacaatGACTAAATGTTATTCCAC
TTGGACTGACGTAACACGTGCTATTTTTATGACGTTCTCCGAACAGAAAA
GGTTGGATATAACAGAAGATATCGCATGCTCATTAATACGGGCCTTTATA
TAGGTGCCATGGACGTTAGCTGTCTCTGTATTGACGGGAGGTTGGTTTCT
AGACTATAGTGTACGTTATAATCTGAATCCATTTTTTTGTTCCATAGGGC
ACGAGCATCCAAAAATCATCGAATATGATATCTCGTACAACGAGACAGAG
GAGCAAGCGAAACGCGATTTCATTGACAAAAGAGGATCTGATTTACCCAC
CCTAATCTCATGGCATCTCTCCTTGTGGAGTACTCGTATAGTTCCGTGGG
TGCTTGACCACTCAGGAGGGTATTTCTCAGGTTGCTCctctttttatttg
tttaaaaCACCGGTACACCAAATTTCTCAAGATGAGCGCCCTGcacctga
aataaaaaatctccCCTTCAGTAAAAGCCTTGCCCTCAAAGAAAATGCAC
CTAAATTCTCGAAAACCTAAAGATCATTTTATTTGTATGAATTTGTATGG
ATCTCAtttttaattgattgatttGTCGACAAAAATTTCCGTCACTTGCC
AATCTCGTAACTTTTGCCAACGATTTTTCCAACAGATCAACGTCAGTTTT
TTAGAGGAATTAAGATAGGAAAACACCAATAAACTGCCATTAAGTTTTAG
acgaaaaaatttttaaagtaaCCTAAATAATTCGATGAAAAATATTCCTT
GCGGCTAAAATTAATCGACAGTCAAAAAATAAGTGTTGTCATGTGAAAAT
TCATTAAATATCACTGTCGCAAAGTGTATAACATATTAAAATTCATCATA
AATCGGTAAAAAAGGAAAGAAGGAAATTCTCTACCCATAGGGTAATATTA
TCCTGTCAATGGTATGAAAAAAACTTCCAGGGCTATAGTATCGGTTATTT
GGATTTTCGCGGACtcgcactttttttaatattgtcTCTGATTTCCTTTT
AGTTGAGGAGCAGAAAATAATTCAAGAATCATTCGACCAGATTTCGGGGA
AAGTTTCATGTTTATCATTCCGTCAAAAAATATCGAGTGACAAACAATGG
CTTAGAATCTATAAGGGTGCTGGGTAAATACTTACTTGTACTTGCAGCTT
TAGCCGgatcattagcgagtttatgtattcgagataaatcgagggggacg
gtataaagcaaagttgacatgggGCTGAAATCgacgtccactttgctcga
cgacggtaaaaacaccaaaataccgttgtctgtttaggtgagcaaaggcg
atatagagccgtacatcaactatcgactttgttttgtatcgatttcactt
accgtagCCCTCGATATTccccgatacataaactcggtattgttGCGACG
ACAGTCGGCGATCAACGTTTGTATGATCATGTTCCCCTTTCTTCTTCAAA
GCATCTTTATAAAATCGATCCTTAGTGACATTAAGCTTCTTTATAACTTT
AGCCTCGAGTGACTCTATTGGACGACCTTgatttgttcttttgttttgtt
gtcaTCAAACAAAAGTCTTTTTGTCAGCGAACTATTTTGTTGGCGAGCTA
AGTGTCCCAGGTAGCTGGTTTGTTGTTTAAGGACGAACCTTTGTGTCAGA
GGTTTTGCATCTTTGAAGAATCTCATGATTGGTCATCATGTATCTAAATT
CTTCACGTTTGCATCCGTTTCTCATAAGTTTCCTAACATTGAAACGTAGA
TTGAATTGATCCTTTGCATTTGTACCTCTAATGATTTACATATTTAACAT
CAACATAAGGCAGTTCTTGTCAACTTTTTTACGGGGATTTTTACAGggca
taggcgtagcgagataccctacatggtgtccctaataaaagtatcgagtt
tgaacatgcgattgagtaaaaaagtttgtgtgtgttatcgctaaaatata
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNtaggctcattacaaaaggtagttacaacgtataaat
taatcaatagcccttttactattcccctgttgcataaatgtacgtcttta
aaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNaagagggagagcttaaaatacaattttgtgaa
tacacacttaaaactttctactcaatcgcatgttcaaactcgatactttt
attagggacaccctgtataaaatCTATGGacgagagcggtttttacgaca
ctgtaattattgcctttgtttttttttgtttttttttctttattgaaaca
aagacacgtgtacactacgaacatatattacaaaacattacttaaacata
aaatatagtccctcctcCCGCTAGGAACTACTCtattgtctcccgaatag
acgccccccgctcttattaagaccccccccgctaataaaattcgaattat
tcaatattttattacagtgtagatagaccttaagcTTGTTAAAATTGTCC
TTTTTGtcagtattggttcttattttattaCGTGTTCAtctgttaaagtt
tcttttttgttgttgaaatttatatcaatttaaaaaaatctgtcttcaaa
ttaccacCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCCCCCCCctctttccccccccccccccccccgcttattagaatttag
aaaattttcctacccccctgcttattcggaccccccccctcgtctattcg
ggagacaagagtaacgttatatcgccagtttcatcaaaagatattGAATA
TGTCATTAACGTCTGTACTCCCTCGTAAATTTTGCAGggatctcgctacg
cctatgcagGGAGTTAAAATAATCTGAtctcgggtgagttagggcgtgta
tagatttaaaaaaatcacaaatcccaAATTTGCGATCAATAAcacccatt
ctcagggattcacttatggatttttaattgacctataccttaaggtttca
ggaTCCGTAACGGATTGTGACGTAATTAAATAGAAAGtgtgaattatgac
gtcataaatcttAAAATAGCTCTAACTCTATGTACATGTcgaatctttgt
caaatttggaccaaatgcATCTAAATGATGCCTAACTTTCCAagtcaaaa
tgttttttaagattttaatgacgtcagcaaaaaatgcaaaaaatcgaaaa
atgtttaaaaaagttacaattcagttagatgcatctttggttcaaatttg
ggaaaGATTGTACACGTACTTTTAATATTATAGCGATAATACAATTCATG
AAGtcaccaaattcgatcaaattatgacgtcatgattacaatttcttATA
TTATAGATTTTAAGGGGTGAAAATTAATTAGGTTACAACCTGATTACAAC
CTGTGAAATCTTTCATCTTACTTTATTTTCAGATGCCATTCAGGCATTGg
tcgaaaatattggacaacATCTTCTACCGATGTTTCGTTGGGAAATGGCT
GTATCAAAACTTCCATTGTTGTACATGAGTTCCTACA Coding sequence (CDS) from alignment at scaffold_213:244777..257963+ >TCONS_00052230 ID=TCONS_00052230|Name=TCONS_00052230|organism=Clytia hemisphaerica|type=CDS|length=2895bp|location=Sequence derived from alignment at scaffold_213:244777..257963+ (Clytia hemisphaerica)
ATGAATCTTAAGATATGTTTATTATCATATTTTGTGGTAGTAGCAATGCT
TCATAAGTTCTCACAAGcGATGAGTGTGGAAGATATGTGGAAAGTGATCG
AAGACGGTGACGCTGAACGGGAAAAGAAACATTTGCCCATTGACGGGGCC
GCTGACCGTGAGATTGAACCAGGGCACGAGCATCCAAAAATCATCGAATA
TGATATCTCGTACAACGAGACAGAGGAGCAAGCGAAACGCGATTTCATTG
ACAAAAGAGGATCTGATTTACCCACCCTAATCTCATGGCATCTCTCCTTG
TGGAGTACTCGTATAGTTCCGTGGGTGCTTGACCACTCAGGAGGGTATTT
CTCAGTTGAGGAGCAGAAAATAATTCAAGAATCATTCGACCAGATTTCGG
GGAAAGTTTCATGTTTATCATTCCGTCAAAAAATATCGAGTGACAAACAA
TGGCTTAGAATCTATAAGGGTGCTGGATGCCATTCAGGCATTGgtcgaaa
atattggacaacATCTTCTACCGATGTTTCGTTGGGAAATGGCTGTATCA
AAACTTCCATTGTTGTACATGAGTTCCTAATGAATCTTAAGATATGTTTA
TTATCATATTTTGTGGTAGTAGCAATGCTTCATAAGTTCTCACAAGcGAT
GAGTGTGGAAGATATGTGGAAAGTGATCGAAGACGGTGACGCTGAACGGG
AAAAGAAACATTTGCCCATTGACGGGGCCGCTGACCGTGAGATTGAACCA
GGGCACGAGCATCCAAAAATCATCGAATATGATATCTCGTACAACGAGAC
AGAGGAGCAAGCGAAACGCGATTTCATTGACAAAAGAGGATCTGATTTAC
CCACCCTAATCTCATGGCATCTCTCCTTGTGGAGTACTCGTATAGTTCCG
TGGGTGCTTGACCACTCAGGAGGGTATTTCTCAGTTGAGGAGCAGAAAAT
AATTCAAGAATCATTCGACCAGATTTCGGGGAAAGTTTCATGTTTATCAT
TCCGTCAAAAAATATCGAGTGACAAACAATGGCTTAGAATCTATAAGGGT
GCTGGATGCCATTCAGGCATTGgtcgaaaatattggacaacATCTTCTAC
CGATGTTTCGTTGGGAAATGGCTGTATCAAAACTTCCATTGTTGTACATG
AGTTCCTAATGAATCTTAAGATATGTTTATTATCATATTTTGTGGTAGTA
GCAATGCTTCATAAGTTCTCACAAGcGATGAGTGTGGAAGATATGTGGAA
AGTGATCGAAGACGGTGACGCTGAACGGGAAAAGAAACATTTGCCCATTG
ACGGGGCCGCTGACCGTGAGATTGAACCAGGGCACGAGCATCCAAAAATC
ATCGAATATGATATCTCGTACAACGAGACAGAGGAGCAAGCGAAACGCGA
TTTCATTGACAAAAGAGGATCTGATTTACCCACCCTAATCTCATGGCATC
TCTCCTTGTGGAGTACTCGTATAGTTCCGTGGGTGCTTGACCACTCAGGA
GGGTATTTCTCAGTTGAGGAGCAGAAAATAATTCAAGAATCATTCGACCA
GATTTCGGGGAAAGTTTCATGTTTATCATTCCGTCAAAAAATATCGAGTG
ACAAACAATGGCTTAGAATCTATAAGGGTGCTGGATGCCATTCAGGCATT
GgtcgaaaatattggacaacATCTTCTACCGATGTTTCGTTGGGAAATGG
CTGTATCAAAACTTCCATTGTTGTACATGAGTTCCTAATGAATCTTAAGA
TATGTTTATTATCATATTTTGTGGTAGTAGCAATGCTTCATAAGTTCTCA
CAAGcGATGAGTGTGGAAGATATGTGGAAAGTGATCGAAGACGGTGACGC
TGAACGGGAAAAGAAACATTTGCCCATTGACGGGGCCGCTGACCGTGAGA
TTGAACCAGGGCACGAGCATCCAAAAATCATCGAATATGATATCTCGTAC
AACGAGACAGAGGAGCAAGCGAAACGCGATTTCATTGACAAAAGAGGATC
TGATTTACCCACCCTAATCTCATGGCATCTCTCCTTGTGGAGTACTCGTA
TAGTTCCGTGGGTGCTTGACCACTCAGGAGGGTATTTCTCAGTTGAGGAG
CAGAAAATAATTCAAGAATCATTCGACCAGATTTCGGGGAAAGTTTCATG
TTTATCATTCCGTCAAAAAATATCGAGTGACAAACAATGGCTTAGAATCT
ATAAGGGTGCTGGATGCCATTCAGGCATTGgtcgaaaatattggacaacA
TCTTCTACCGATGTTTCGTTGGGAAATGGCTGTATCAAAACTTCCATTGT
TGTACATGAGTTCCTAATGAATCTTAAGATATGTTTATTATCATATTTTG
TGGTAGTAGCAATGCTTCATAAGTTCTCACAAGcGATGAGTGTGGAAGAT
ATGTGGAAAGTGATCGAAGACGGTGACGCTGAACGGGAAAAGAAACATTT
GCCCATTGACGGGGCCGCTGACCGTGAGATTGAACCAGGGCACGAGCATC
CAAAAATCATCGAATATGATATCTCGTACAACGAGACAGAGGAGCAAGCG
AAACGCGATTTCATTGACAAAAGAGGATCTGATTTACCCACCCTAATCTC
ATGGCATCTCTCCTTGTGGAGTACTCGTATAGTTCCGTGGGTGCTTGACC
ACTCAGGAGGGTATTTCTCAGTTGAGGAGCAGAAAATAATTCAAGAATCA
TTCGACCAGATTTCGGGGAAAGTTTCATGTTTATCATTCCGTCAAAAAAT
ATCGAGTGACAAACAATGGCTTAGAATCTATAAGGGTGCTGGATGCCATT
CAGGCATTGgtcgaaaatattggacaacATCTTCTACCGATGTTTCGTTG
GGAAATGGCTGTATCAAAACTTCCATTGTTGTACATGAGTTCCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052230-exon-scaffold_213-1491911889:244777..244824 | TCONS_00052230-exon-scaffold_213-1491911889:244777..244824 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1510915933:244777..244824 | TCONS_00052230-exon-scaffold_213-1510915933:244777..244824 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1575043694:244777..244824 | TCONS_00052230-exon-scaffold_213-1575043694:244777..244824 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1491911889:252945..253059 | TCONS_00052230-exon-scaffold_213-1491911889:252945..253059 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1510915933:252945..253059 | TCONS_00052230-exon-scaffold_213-1510915933:252945..253059 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1575043694:252945..253059 | TCONS_00052230-exon-scaffold_213-1575043694:252945..253059 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1491911889:253496..253600 | TCONS_00052230-exon-scaffold_213-1491911889:253496..253600 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1510915933:253496..253600 | TCONS_00052230-exon-scaffold_213-1510915933:253496..253600 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1575043694:253496..253600 | TCONS_00052230-exon-scaffold_213-1575043694:253496..253600 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1491911889:254224..254406 | TCONS_00052230-exon-scaffold_213-1491911889:254224..254406 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1510915933:254224..254406 | TCONS_00052230-exon-scaffold_213-1510915933:254224..254406 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1575043694:254224..254406 | TCONS_00052230-exon-scaffold_213-1575043694:254224..254406 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1491911889:255029..255149 | TCONS_00052230-exon-scaffold_213-1491911889:255029..255149 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1510915933:255029..255149 | TCONS_00052230-exon-scaffold_213-1510915933:255029..255149 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1575043694:255029..255149 | TCONS_00052230-exon-scaffold_213-1575043694:255029..255149 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1491911889:257859..257963 | TCONS_00052230-exon-scaffold_213-1491911889:257859..257963 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1510915933:257859..257963 | TCONS_00052230-exon-scaffold_213-1510915933:257859..257963 | Clytia hemisphaerica | exon |
| TCONS_00052230-exon-scaffold_213-1575043694:257859..257963 | TCONS_00052230-exon-scaffold_213-1575043694:257859..257963 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_213 | supercontig | scaffold_213:244777..257963 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004222 | metalloendopeptidase activity |
| GO:0008237 | metallopeptidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004222 |
metalloendopeptidase activity |
| molecular_function |
GO:0008237 |
metallopeptidase activity |
Blast
The following BLAST results are available for this feature:
|
