TCONS_00052235 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052235
Unique NameTCONS_00052235
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2004

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052235 ID=TCONS_00052235|Name=TCONS_00052235|organism=Clytia hemisphaerica|type=transcript|length=2004bp
CTCAATCTTGAAGGTAACCGGAAACTTGATTTTACGTCATATTTCTACTT
TAGCTAACCAACTCTAAAAGCCATCAATCAAACCCACTTTATGGATGCAA
CGTGTATTCTTGATGCCAATCCTGTTTCGTTGCACGGGGTCTCAGGTGTG
ATTTGTCTAGTCTCTGTCTGGGTTGTTGGTAGTACCTCTTAGATATCTAG
CTGTAAAGTATTCATTCTATCGAAAATGGCTCGTGGAGGTAAAGGACGAA
AGATTTCTGGCGGAAACGATGGAGTCGTTTATGAATCAGGTCCAAGCGAA
TCCAGTGGTGGCATTGGACTATTCaatattttaatcttttttctcGCAAC
AACTTCCATTGCCATTAATGTTGGAATAATTTATGGTGCCATTCCAATCC
AAGGATGTGAAGGACCAGAAGGAAAACCTGGTAGACAAGGACCTGCAGGA
CCCCAAGGGGTAGCTGGACCCATTGGCCCTGAAGGACCaaaaggtgatgc
aggagatgaAGGACCCACTGGACCCCAAGGAGATGAAGGAGCTCAAGGAC
CAAAAGGAGATGCTGGAGAAGCTGGGCCTGAAGGACCAGCAGGATCAAAA
GGTGATGCTGGGGCTGATGGTGCACCAGGTGCTGATGGAAAAGATGGAGC
TGCAGGAAAAGACGGAGCTGAAGGACCTGTTGGACCAATCGGCGCTGCTG
GAAAAGATGGTGAACAAGgTTCACAAGGACCAGCCGGACCTGCTGGGCCA
CCAGGACCACAAGGACCACAAGGTGAGGAAGGACCACAAGGCAAGCGTGG
AGAACGTGGTCCACCAGGACCACCGGGACCTGAAGGGCCAGAAGGACCTG
AGGGGCCGCAAGGAAAACAAGGATTGAGAGgaCCCCAAGGAGAAACTGGA
ACCCAAGGACCCGCTGGAGAACAAGGAACTGCCGGAGAACAAGGTCAACC
TGGACAGCAGGGAGAACGTGGACCAGAAGGTGCTGCTGGCCAACCCGCTG
AGGCCTAAGTCTTTTCGATTGAATTGAAAAGTACATTTTTCACGAAGATG
TTGTAAAAACCAAAGATTGGGAATATTTTTATTGTAgagtttctttttga
aaaaactttttagtaTGTGTTTGTTGGTTTAGGTGATAAATGTTTTTTCG
AgttctttcaaaaacttttaggcAAGCTAGAGAGAGCTTCTATGTATGCC
TTGGATAACTTAGCCTCTTCATTCCCAACTGAAAATTGTGATGAGAGCTT
TTGATATGTATAAACTTTCGCTGTCTTTTTGTAGAGTTATAGAATTTGTT
TAGAGATTTAAagtatttgtttattttttagaatttatctATTATAATTa
gtatttgaaaatgaaattctcCTTGCTTTTTAGttgtattcttacttttt
agttattttttaaatgaaacgtCTAACGTTATAGTTAAGTTTGGTAGAAA
TTTggtagaaacttttttttaattcatttcaaaattcaagataATAATGG
TTCAATCTTGCActttgaaattaatttaaaaacaagtttctttttgatTA
ACGATTCAGTTTTTGATTGAGGTGTAGGGATTTGCAGAGATTTTAATGGA
GGTTTATTTCGCTAGATCTAAGCTTTAATAACAAGAGCGATATGCAAGGT
CACCAAATCTTACAATTTTCCATGTGAGTTGAGCGAAGGTTTCATCATGG
CGAAACCACATAACCCTCTTATCTCTGTAAGCATAATCCATAAGGCTTTT
TTATAATGTTTTATTGACGGCTTAttaaaaacctcaatttttttgtttta
taaaaaaaagaatttttattacTATTTAGATAGCTTTAATACAGCGCcga
taaaatatatatttaccaagactttgttaaaaaaatacgCCTCAAGTTAC
TTGCTTTCGTTAAGTTTATTTTTAGTCCCTTTCTGTAAACTGCAAATCTC
AAAAGAAAGCTTTGTATAtataatcacatgataacgagtgcaattcgagg
aaag
Run BLAST on NCBI

transcript from alignment at scaffold_213:411230..421228+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052235 ID=TCONS_00052235|Name=TCONS_00052235|organism=Clytia hemisphaerica|type=transcript|length=9999bp|location=Sequence derived from alignment at scaffold_213:411230..421228+ (Clytia hemisphaerica)
CTCAATCTTGAAGGTAACCGGAAACTTGATTTTACGTCATATTTCTACTT
TAGCTAACCAACTCTAAAAGCCATCAATCAAACCCACTTTATGGATGCAA
CGTGTATTCTTGATGCCAATCCTGTTTCGTTGCACGGGGTCTCAGGTGTG
ATTTGTCTAGTCTCTGTCTGGGTTGTTGGTAGTACCTCTTAGATATCTAG
CTGTAAAGTATTCATTCTATCGAAAATGGCTCGTGGAGGTAAAGGACGAA
AGATTTCTGGCGGAAACGATGGAGTCGTTTATGAATCAGGTCCAAGCGAA
TCCAGTGGTGGCATTGGACTATTCaatattttaatcttttttctcGCAAC
AACTTCCATTGCCATTAATGTTGGAATAATTTATGGTGCCATTCCAATCC
AAGGTAACTATTAATCATATTTCATATAAATTTCAGATTTCCAATAGTTG
ATTTGGGTATTTACTCCACTTGTAAGCAAGGCAAGGCCAcaaatcacaaa
taacttgtgttcgcgTTGTTGGATCGACTGATAATTgttctaaattttca
gattattttgagtCGGGAAGTTGCAAAATTGTCGGAATTTTATCCATTTC
CATCCTTCGCTTCACCTGTCATCTTTACTTCAATCACATTCATTGTTTTA
ctgaaaaatacaatttcaaattttggagaTGATATTAAACCCTTTCCCTA
GTTATCATAAAAACAGAGAAAACCACAGAAAACGTCAAAAGGACTTTGCG
GGGCATTGAAGAAGGGGTATAAAGTAGTGTAGTATCAGGAGCCTAAAACC
CATGCTTTGGTGGTGAAGGTAAGGCTTGaacaacataaaaaaaaacagca
taatcacaatagaccttttttcaaagaggacgtcctgttgaataattatg
tagtccagtcattaaaacaatgatagagccatgcataattactgtatcat
gcatattgtaataattttgcatggttttatcattgtttttctgctgaact
acataattattcaacagggtggcctctttgaaaaaagacttATGGCTAAA
TCTTCATGATGCACTGACAAGCACGGagacagaaaattttttgaaacttt
tcaatactTCACCCCGGCTCGAACCTACAAGTTTCCGATTACAAAACACG
TAGTCCATACCACACTGGGCCACGACGGCTGCTGATTTTCCGAAATTCAA
GGTTATTTATAGAGTGACATACATAGTATATCAGGGTTGCCACGTCTGCC
GAAATTGTCTGGAATTTAGCAAAAGTCTGGAAATGTCTGGTAAGTCTGGA
AAAAGTCTGGAAATAGCATACCTGTCTGGAAAAAGTCTGGAAATAGAGAA
ACATACATACTGGGAATAACCTGTACTGTTAACTTTATTATCTTTGTTAA
AGACAACCTTAGAATTTTGGtttttgcacgtttttttactTGTATATACT
TTGTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATATACTTTGTCACT
TATAAAAAAGTCTGGAAAATATTGGTGTTTTTTACCTAAAGTCTGGAAAA
ATTTGgcgattttaagcaaaaatatcTGGAAAATATTGAGGTTTTTGGGC
AAaagtctggaattttgaaagtttcctaCCCGTGGCAACCCTGTATATAC
GGGTGAACAGACCTCACaagttaggctaactgttatgatcGCCATTCCTC
CAGGAAGACCCCACATACAGGTGCACCACCGGGAGGGTGCACAGCCGTCT
GGGTGCATGTTTGGGATGAGCAGCAGGCTGGCGCCTATCCCTAACAAAAC
GCTGCGCTCGCCTATTTTGCGCACAATATTTTGCCCGCGCGGTGTACTTG
CAAGGCCGGTGCATCATGAAGATTTAGCCATaggtgaaaaaaggtctata
cagtcatagcgtcagcctgggtttagatCCCAGGCAAAAActaggtcccc
cctgagttttaagtcgccccaaagatttatgaaatttgttaGCCCCtagg
acttttgaccctagacacttcaaaaaattgatccagtaaatAAGGGTTTT
CCAATGCAAATTGCAttcagttctaagtttaagataaaatattttgcaca
ctttctataaaaatattgcgccgcaggcaaaaatttaattgagtaattga
agccaactattgaaaacaagctgaattattttagccgTTAGTGATTAGAT
TTTAGCTCTCCCCANaagctgaattattttagccgTTAGTGATTAGTTTT
TAGCTCTCCCcaagtacataggtcccccaaaaaagtggtgtacttccagc
cccctctttttggggaaaaatttAGGATGTGACCCCCTAACCCaaggggg
gctgacgctatgttaCAGACAAGTTTGATTCTGTTAAATTGTCAACCTTG
TCCCAGTATACTTCTTACCAGGTTTTATGAGGTTGATTAATTTTGTATTA
TATATACCTTTAATATTAAATTATATATAAAAAAATTATATCTTTAATAC
TGATGAATATAGTCTTGAGTTTGCATGTTTTCAATTTAATTTTCCATAGG
ATGTGAAGGACCAGAAGGAAAACCTGGTAGACAAGGTATGATATATTTTT
TCGAAGTTAGAACGTAACTGAGAAAAGAGGATCTTTCCAACAAGTTCTCA
CTTTTAACAAGTCTCTTTAAGTTAAACCCTATAACTCAAACAAGTTTGCT
TGTCCCTTCAGTTAACTTTGCAGAACTATGCCTTATAAAATTCTTATGGA
GACTTGAATAGCACAGACTTCAGAGCAAATTATTCTTTGTTTTTAAATGA
CAACCTTTCTGTTTGCAGGACCTGCAGGACCCCAAGGGGTAGCTGGACCC
ATTGGCCCTGAAGGTAATTATTTGTAATTTAAAGATATTGAAAATATCTA
TCTATTGTTGCTTGATCTTACTGGATATTTTTTTACCTGGTAGACCATAT
ATTTTATAAAGCATTTTATTAACTGACACTTGGTTCATCATTTTGTTGCT
TTTCAGCCTTTCTAATTCCAGGCCAttttcatgccctttaagcatccggt
tatcggacgctgcccctcttgaaattactaaaattttgataaaaaccgta
aaaacagcctttttagtggaaaaacataagaaaaagtGCCTTGCCTTTCt
agggggggtttcatggttggcggaggagcggaatcggcccttttttcgga
cggagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNcggaattacggaaattgggttctctga
cggagacggaaaattagacaattttagtgcggaaaaacggaatttagcaa
aaagatttgcggaatttcggaattagtaaaagatattcaaaatttgcgga
attttcaacaaaaatattgaatttcaaaggaattttcggtgacagaattt
tggttcaatttaagacgatTTGACGGAATTTGGAGAAAAATTTGACGGAA
TTGCGAAAttgggtaccccctgaaacccccccccctttctaaaatatggc
ctgaatTCATATTTATTTACATCAGCAAAAAATTCTGGGTTCAATACTGT
AGTAGAGTAAGCACTTTCACATTGGCAAAGACAAATTTAAGGCAGGATTT
GCTTCGGCAAGATTTGCATCCGCAATAGCCAAATGCTGACGCAAATTAGA
ATggctctttttattttattacttCTGATTAATAATATTAGTAAGTTGTG
ATACACTGCAGATCAGAAGTTTTCCTATTTTTATTTTGGTATACAGTGGT
TTAAAATTCAGTAAATTATTTCATTCCTTTAGGACCaaaaggtgatgcag
gagatgaAGGTATGCTAAATACATtctgtcaaatatttttcttacttcAA
AATAAGAACTGACAGGCTTGATTTGGCATTTTTGTAAAGCaattttttga
tagttttataAACACAAAACCAACATTCATAAATCATAACTCGTTAATCA
TAACTCATAAATCATAATGTTTTTACTACAGGACCCACTGGACCCCAAGG
AGATGAAGGAGCTCAAGGACCAAAAGGAGATGCTGGAGAAGCTGGGCCTG
AAGGACCAGCAGGATCAAAAGGTTTGAATTGTTTAATGACCCTGAATGAC
CTCCACACATTTATTAATTTACTGTAGAAATTTATAAGCAATCAAAGGAA
AAGGTAGAGCATTCAGCTAAGGTGCAAATTTGTGAAAGTTGGTTCTGTAA
AGATTTCTGAAATATTGATTCACTTAAGTTCaatttttcgtcaaaattta
TAGGTGATGCTGGGGCTGATGGTGCACCAGGTGCTGATGGAAAAGATGGT
TAGTAAATTATTCCCTGCGCATTATTCAAATTTGCCAACATTTGCTATAC
CACCTCATATGTGATAGGTCGTTTTGACAGgtttaatataaaaaaaatga
atttattttctaatgaaccaaatttgataaatgacttATCATTATCAAAG
TCTTTCTTTTTTCCAatgaaaaatgtttaaattgatgaaaaaattcaatt
caaaaagtttaaCTTACTCCTTGCACAACTAGTCCATGTTCCTTATTTAA
TGACATCTTTACactttttggttcaatttaaaaACTTACGCTTGATTTaa
taaatcaccaaaatttgaaGGATATGTTGAGGCTGACTCTAATTTTTCTC
TCTAACTAAATACAGGAGCTGCAGGAAAAGACGGAGCTGAAGGACCTGTT
GGACCAATCGGCGCTGCTGGAAAAGATGGTGAACAAGGTGAACTTTCAAT
CATTTTCACTGTCATCTTTAAAATAATGGTTGTAGGAAAATAAGAgcttt
tttaaaataatatgtGGCTTTTAGTCAAAACCtaacaacaaattaaaaat
tCCGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAATGATTGGATATAGTTAGCATACTTAGAacattttagcaaa
aaaataagGACATTCAATTCTCAGCCAAAATTCACTGGtttctataaaaa
aagagtgtagagtgaattcatcaaaattatatttattaattCTATATCAA
GTAAGGGAAGTAAGGGTTGATTAATCTTAACGttgatatattttttgata
atgactattaaattttttcttctttctaggTTCACAAGGACCAGCCGGAC
CTGCTGGGCCACCAGGACCACAAGGACCACAAGGTTTGACCTAAATTTTA
ATTGGTATTTAAGTTACTTTATCTTCAGAATGTTACTGCTAttgattttt
ttgtctgtttaaacctaaaaacctaaaaagggtaaattgaaattaaattg
ctATTAAAATAATGCTTACTCAAGGTGAGGAAGGACCACAAGGCAAGCGT
GGAGAACGTGGTCCACCAGGACCACCGGGACCTGAAGGGCCAGAAGGACC
TGAGGGGCCGCAAGGAAAACAAGGATTGAGAGGTGAGGAAGTAGGATGTa
atgaatgtttttttaaacaaaacattaATATGCATACACATCTTATACTT
CCCAAAACCACCTCCTAACTACTAACCACCCACAATGTACACTTTTCTCT
TAAAAACGAGGGTTGCGAAAATCAAACTAGTTAGGCAACATTAAACTATT
CAGGAGAGTTAGAACAAATCATTTACCTGCAAGAAAAGTCATTTTACAAT
ACAACTACCATCATCCTTaactatctttaaaaaaatgacaactCGATGTg
acaaataaaacaaacaaagtcTGATTGTCTGAGAATGATGGGGGAATGAT
ATGAcaaatagtagggggccaagcctggggtcctGTGACATCtttacgac
ctagccatttttagtctatttcaaagaacagtatataaaaagatattttt
gagagggaagacgcggattaggcctggtaaaactttttgtgaccaaaata
gtgacgccataggcaaaactgcaaggaaaaataaggggtagagaaatagc
ttattttcaaaagtcaaaataaacaaaaatgattggtaccatctgataca
gcatgaaattctgagcagtAAATTGTATTAtcacaactctctgactaaca
cacacaaagaaatacagcaagttgaagttcaaaaacataccgacgtccAT
GATCAAGACAATAGATTTGATGTTAaattacagtagagctgacagttagt
tggtctaTTAGAGAGCAGAGAGAAATAAAAAACTCAAACATCATCATGCT
TTACACACCTAACAAAACGAATACAGTATAGTTTTACAGCTCAACATACC
TTTCACTGTACCGGGAATGGTTCTCAGTCGAGGACCGAAACGtctacaaa
atatattttgaaaatgaacaCCATATGACAAAATTAACACTCAAGGTTTA
TGAAAGGATCGATGTTATTACAATACGTTTTTACTGCTCTTTGATACAAT
ATGGAATACTTTGCGAGTAGACACGAAGTTGACGTAGCATCAATTTGTTG
AATTGCCTTCGAAGCTACAAGGCTCTGAATATCCTTACAACTTATTTCAT
ACACTGTACACTTACCAACAACACTTACACCTTATATCATTTCTTTTCAG
TTTCTATCTATTTGCCAgaataaattttctttgttgaaaAATCATCTAAT
GTTATAATTCCTTCATTTTTGTATCATCTGGTATCATTGTTAATAAATTT
GAGTGGACTAAACGTATgctatcttttgttttttaggaCCCCAAGGAGAA
ACTGGAACCCAAGGACCCGCTGGAGAACAAGGAACTGCCGGAGAACAAGG
TCAACCTGGACAGCAGGGAGAACGTGGACCAGAAGGTGCTGCTGGCCAAC
CCGCTGAGGCCTAAGTCTTTTCGATTGAATTGAAAAGTACATTTTTCACG
AAGATGTTGTAAAAACCAAAGATTGGGAATATTTTTATTGTAgagtttct
ttttgaaaaaactttttagtaTGTGTTTGTTGGTTTAGGTGATAAATGTT
TTTTCGAgttctttcaaaaacttttaggcAAGCTAGAGAGAGCTTCTATG
TATGCCTTGGATAACTTAGCCTCTTCATTCCCAACTGAAAATTGTGATGA
GAGCTTTTGATATGTATAAACTTTCGCTGTCTTTTTGTAGAGTTATAGAA
TTTGTTTAGAGATTTAAagtatttgtttattttttagaatttatctATTA
TAATTagtatttgaaaatgaaattctcCTTGCTTTTTAGttgtattctta
ctttttagttattttttaaatgaaacgtCTAACGTTATAGTTAAGTTTGG
TAGAAATTTggtagaaacttttttttaattcatttcaaaattcaagataA
TAATGGTTCAATCTTGCActttgaaattaatttaaaaacaagtttctttt
tgatTAACGATTCAGTTTTTGATTGAGGTGTAGGCATTTGCAGAGATTTT
AATGGAGGTTTATTTCGCTAGATCTAAGCTTTAATAACAAGAGCGATATG
CAAGGTCACCAANACGTTTTTACCGCTCTTTGATACAATATGGAATACTT
TGCGAGTAGACACGAAGTTGACGTAGCATCAATTTGTTGAATTGCCTTCG
AAGCTACAAGGCTCTGAATATCCTTACAACTTATTTCATACACTGTACAC
TTACCAACAACACTTACACCTTATATCATTTCTTTTCAGTTTCTATCTAT
TTGCCAgaataaattttctttgttgaaaAATCATCTAATGTTATAATTCC
TTCATTTTTGTATCATCTGGTATCATTGTTAATAAATTTGAGTGGACTAA
ACGTATgctatcttttgttttttaggaCCCCAAGGAGAAACTGGAACCCA
AGGACCCGCTGGAGAACAAGGAACTGCCGGAGAACAAGGTCAACCTGGAC
AGCAGGGAGAACGTGGACCAGAAGGTGCTGCTGGCCAACCCGCTGAGGCC
TAAGTCTTTTCGATTGAATTGAAAAGTACATTTTTCACGAAGATGTTGTA
AAAACCAAAGATTGGGAATATTTTTATTGTAgagtttctttttgaaaaaa
ctttttagtaTGTGTTTGTTGGTTTAGGTGATAAATGTTTTTTCGAgttc
tttcaaaaacttttaggcAAGCTAGAGAGAGCTTCTATGTATGCCTTGGA
TAACTTAGCCTCTTCATTCCCAACTGAAAATTGTGATGAGAGCTTTTGAT
ATGTATAAACTTTCGCTGTCTTTTTGTAGAGTTATAGAATTTGTTTAGAG
ATTTAAagtatttgtttattttttagaatttatctATTATAATTagtatt
tgaaaatgaaattctcCTTGCTTTTTAGttgtattcttactttttagtta
ttttttaaatgaaacgtCTAACGTTATAGTTAAGTTTGGTAGAAATTTgg
tagaaacttttttttaattcatttcaaaattcaagataATAATGGTTCAA
TCTTGCActttgaaattaatttaaaaacaagtttctttttgatTAACGAT
TCAGTTTTTGATTGAGGTGTAGGGATTTGCAGAGATTTTAATGGAGGTTT
ATTTCGCTAGATCTAAGCTTTAATAACAAGAGCGATATGCAAGGTCACCA
AATCTTACAATTTTCCATGTGAGTTGAGCGAAGGTTTCATCATGGCGAAA
CCACATAACCCTCTTATCTCTGTAAGCATAATCCATAAGGCTTTTTTATA
ATGTTTTATTGACGGCTTAttaaaaacctcaatttttttgttttataaaa
aaaagaatttttattacTATTTAGATAGCTTTAATACAGCGCcgataaaa
tatatatttaccaagactttgttaaaaaaatacgCCTCAAGTTACTTGCT
TTCGTTAAGTTTATTTTTAGTCCCTTTCTGTAAACTGCAAATCTCAAAAG
AAAGCTTTGTATAtataatcacatgataacgagtgcaattcgaggaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033060XLOC_033060Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052235-exon-scaffold_213-1491911889:411230..411632TCONS_00052235-exon-scaffold_213-1491911889:411230..411632Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:411230..411632TCONS_00052235-exon-scaffold_213-1510915933:411230..411632Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:411230..411632TCONS_00052235-exon-scaffold_213-1575043694:411230..411632Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:413879..413914TCONS_00052235-exon-scaffold_213-1491911889:413879..413914Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:413879..413914TCONS_00052235-exon-scaffold_213-1510915933:413879..413914Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:413879..413914TCONS_00052235-exon-scaffold_213-1575043694:413879..413914Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:414148..414192TCONS_00052235-exon-scaffold_213-1491911889:414148..414192Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:414148..414192TCONS_00052235-exon-scaffold_213-1510915933:414148..414192Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:414148..414192TCONS_00052235-exon-scaffold_213-1575043694:414148..414192Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:415262..415288TCONS_00052235-exon-scaffold_213-1491911889:415262..415288Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:415262..415288TCONS_00052235-exon-scaffold_213-1510915933:415262..415288Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:415262..415288TCONS_00052235-exon-scaffold_213-1575043694:415262..415288Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:415461..415550TCONS_00052235-exon-scaffold_213-1491911889:415461..415550Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:415461..415550TCONS_00052235-exon-scaffold_213-1510915933:415461..415550Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:415461..415550TCONS_00052235-exon-scaffold_213-1575043694:415461..415550Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:415733..415777TCONS_00052235-exon-scaffold_213-1491911889:415733..415777Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:415733..415777TCONS_00052235-exon-scaffold_213-1510915933:415733..415777Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:415733..415777TCONS_00052235-exon-scaffold_213-1575043694:415733..415777Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:416145..416216TCONS_00052235-exon-scaffold_213-1491911889:416145..416216Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:416145..416216TCONS_00052235-exon-scaffold_213-1510915933:416145..416216Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:416145..416216TCONS_00052235-exon-scaffold_213-1575043694:416145..416216Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:417459..417512TCONS_00052235-exon-scaffold_213-1491911889:417459..417512Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:417459..417512TCONS_00052235-exon-scaffold_213-1510915933:417459..417512Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:417459..417512TCONS_00052235-exon-scaffold_213-1575043694:417459..417512Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:417654..417761TCONS_00052235-exon-scaffold_213-1491911889:417654..417761Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:417654..417761TCONS_00052235-exon-scaffold_213-1510915933:417654..417761Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:417654..417761TCONS_00052235-exon-scaffold_213-1575043694:417654..417761Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1491911889:420105..421228TCONS_00052235-exon-scaffold_213-1491911889:420105..421228Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1510915933:420105..421228TCONS_00052235-exon-scaffold_213-1510915933:420105..421228Clytia hemisphaericaexon
TCONS_00052235-exon-scaffold_213-1575043694:420105..421228TCONS_00052235-exon-scaffold_213-1575043694:420105..421228Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:411230..421228 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.62313e-09	4.33765e-09	0	1.31733e-08	6.90671e-08	1.75802e-08	7.99206e-08	8.72554e-09	2.06601e-10	3.34211e-08	3.16412e-08	2.98051e-09	2.17301e-10	0	1.65887e-10	2.9923e-10	2.03e-08	9.52615e-09	2.34143e-10	7.15773e-10	0.503345	9.15613e-05	0.198276	1.09659e-07	3.28876e-07	6.24526e-07	6.97142e-08	3.7494e-07	0.00061962	0.183852
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052235 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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