TCONS_00052237 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052237
Unique NameTCONS_00052237
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1868

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052237 ID=TCONS_00052237|Name=TCONS_00052237|organism=Clytia hemisphaerica|type=transcript|length=1868bp
ATTTTACGTCATATTTCTACTTTAGCTAACCAACTCTAAAAGCCATCAAT
CAAACCCACTTTATGGATGCAACGTGTATTCTTGATGCCAATCCTGTTTC
GTTGCACGGGGTCTCAGGTGTGATTTGTCTAGTCTCTGTCTGGGTTGTTG
GTAGTACCTCTTAGATATCTAGCTGTAAAGTATTCATTCTATCGAAAATG
GCTCGTGGAGGTAAAGGACGAAAGATTTCTGGCGGAAACGATGGAGTCGT
TTATGAATCAGGTCCAAGCGAATCCAGTGGTGGCATTGGACTATTCaata
ttttaatcttttttctcGCAACAACTTCCATTGCCATTAATGTTGGAATA
ATTTATGGTGCCATTCCAATCCAAGGATGTGAAGGACCAGAAGGAAAACC
TGGTAGACAAGGACCTGCAGGACCCCAAGGGGTAGCTGGACCCATTGGCC
CTGAAGGACCaaaaggtgatgcaggagatgaAGGACCCACTGGACCCCAA
GGAGATGAAGGAGCTCAAGGACCAAAAGGAGATGCTGGAGAAGCTGGGCC
TGAAGGACCAGCAGGATCAAAAGGTGATGCTGGGGCTGATGGTGCACCAG
GTGCTGATGGAAAAGATGGAGCTGCAGGAAAAGACGGAGCTGAAGGACCT
GTTGGACCAATCGGCGCTGCTGGAAAAGATGGTGAACAAGgTTCACAAGG
ACCAGCCGGACCTGCTGGGCCACCAGGACCACAAGGACCACAAGgaCCCC
AAGGAGAAACTGGAACCCAAGGACCCGCTGGAGAACAAGGAACTGCCGGA
GAACAAGGTCAACCTGGACAGCAGGGAGAACGTGGACCAGAAGGTGCTGC
TGGCCAACCCGCTGAGGCCTAAGTCTTTTCGATTGAATTGAAAAGTACAT
TTTTCACGAAGATGTTGTAAAAACCAAAGATTGGGAATATTTTTATTGTA
gagtttctttttgaaaaaactttttagtaTGTGTTTGTTGGTTTAGGTGA
TAAATGTTTTTTCGAgttctttcaaaaacttttaggcAAGCTAGAGAGAG
CTTCTATGTATGCCTTGGATAACTTAGCCTCTTCATTCCCAACTGAAAAT
TGTGATGAGAGCTTTTGATATGTATAAACTTTCGCTGTCTTTTTGTAGAG
TTATAGAATTTGTTTAGAGATTTAAagtatttgtttattttttagaattt
atctATTATAATTagtatttgaaaatgaaattctcCTTGCTTTTTAGttg
tattcttactttttagttattttttaaatgaaacgtCTAACGTTATAGTT
AAGTTTGGTAGAAATTTggtagaaacttttttttaattcatttcaaaatt
caagataATAATGGTTCAATCTTGCActttgaaattaatttaaaaacaag
tttctttttgatTAACGATTCAGTTTTTGATTGAGGTGTAGGGATTTGCA
GAGATTTTAATGGAGGTTTATTTCGCTAGATCTAAGCTTTAATAACAAGA
GCGATATGCAAGGTCACCAAATCTTACAATTTTCCATGTGAGTTGAGCGA
AGGTTTCATCATGGCGAAACCACATAACCCTCTTATCTCTGTAAGCATAA
TCCATAAGGCTTTTTTATAATGTTTTATTGACGGCTTAttaaaaacctca
atttttttgttttataaaaaaaagaatttttattacTATTTAGATAGCTT
TAATACAGCGCcgataaaatatatatttaccaagactttgttaaaaaaat
acgCCTCAAGTTACTTGCTTTCGTTAAGTTTATTTTTAGTCCCTTTCTGT
AAACTGCAAATCTCAAAAGAAAGCTTTGTATAtataatcacatgataacg
agtgcaattcgaggaaag
Run BLAST on NCBI

transcript from alignment at scaffold_213:411258..421228+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052237 ID=TCONS_00052237|Name=TCONS_00052237|organism=Clytia hemisphaerica|type=transcript|length=9971bp|location=Sequence derived from alignment at scaffold_213:411258..421228+ (Clytia hemisphaerica)
ATTTTACGTCATATTTCTACTTTAGCTAACCAACTCTAAAAGCCATCAAT
CAAACCCACTTTATGGATGCAACGTGTATTCTTGATGCCAATCCTGTTTC
GTTGCACGGGGTCTCAGGTGTGATTTGTCTAGTCTCTGTCTGGGTTGTTG
GTAGTACCTCTTAGATATCTAGCTGTAAAGTATTCATTCTATCGAAAATG
GCTCGTGGAGGTAAAGGACGAAAGATTTCTGGCGGAAACGATGGAGTCGT
TTATGAATCAGGTCCAAGCGAATCCAGTGGTGGCATTGGACTATTCaata
ttttaatcttttttctcGCAACAACTTCCATTGCCATTAATGTTGGAATA
ATTTATGGTGCCATTCCAATCCAAGGTAACTATTAATCATATTTCATATA
AATTTCAGATTTCCAATAGTTGATTTGGGTATTTACTCCACTTGTAAGCA
AGGCAAGGCCAcaaatcacaaataacttgtgttcgcgTTGTTGGATCGAC
TGATAATTgttctaaattttcagattattttgagtCGGGAAGTTGCAAAA
TTGTCGGAATTTTATCCATTTCCATCCTTCGCTTCACCTGTCATCTTTAC
TTCAATCACATTCATTGTTTTActgaaaaatacaatttcaaattttggag
aTGATATTAAACCCTTTCCCTAGTTATCATAAAAACAGAGAAAACCACAG
AAAACGTCAAAAGGACTTTGCGGGGCATTGAAGAAGGGGTATAAAGTAGT
GTAGTATCAGGAGCCTAAAACCCATGCTTTGGTGGTGAAGGTAAGGCTTG
aacaacataaaaaaaaacagcataatcacaatagaccttttttcaaagag
gacgtcctgttgaataattatgtagtccagtcattaaaacaatgatagag
ccatgcataattactgtatcatgcatattgtaataattttgcatggtttt
atcattgtttttctgctgaactacataattattcaacagggtggcctctt
tgaaaaaagacttATGGCTAAATCTTCATGATGCACTGACAAGCACGGag
acagaaaattttttgaaacttttcaatactTCACCCCGGCTCGAACCTAC
AAGTTTCCGATTACAAAACACGTAGTCCATACCACACTGGGCCACGACGG
CTGCTGATTTTCCGAAATTCAAGGTTATTTATAGAGTGACATACATAGTA
TATCAGGGTTGCCACGTCTGCCGAAATTGTCTGGAATTTAGCAAAAGTCT
GGAAATGTCTGGTAAGTCTGGAAAAAGTCTGGAAATAGCATACCTGTCTG
GAAAAAGTCTGGAAATAGAGAAACATACATACTGGGAATAACCTGTACTG
TTAACTTTATTATCTTTGTTAAAGACAACCTTAGAATTTTGGtttttgca
cgtttttttactTGTATATACTTTGTCACNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTGTATATACTTTGTCACTTATAAAAAAGTCTGGAAAATATTGGTGT
TTTTTACCTAAAGTCTGGAAAAATTTGgcgattttaagcaaaaatatcTG
GAAAATATTGAGGTTTTTGGGCAAaagtctggaattttgaaagtttccta
CCCGTGGCAACCCTGTATATACGGGTGAACAGACCTCACaagttaggcta
actgttatgatcGCCATTCCTCCAGGAAGACCCCACATACAGGTGCACCA
CCGGGAGGGTGCACAGCCGTCTGGGTGCATGTTTGGGATGAGCAGCAGGC
TGGCGCCTATCCCTAACAAAACGCTGCGCTCGCCTATTTTGCGCACAATA
TTTTGCCCGCGCGGTGTACTTGCAAGGCCGGTGCATCATGAAGATTTAGC
CATaggtgaaaaaaggtctatacagtcatagcgtcagcctgggtttagat
CCCAGGCAAAAActaggtcccccctgagttttaagtcgccccaaagattt
atgaaatttgttaGCCCCtaggacttttgaccctagacacttcaaaaaat
tgatccagtaaatAAGGGTTTTCCAATGCAAATTGCAttcagttctaagt
ttaagataaaatattttgcacactttctataaaaatattgcgccgcaggc
aaaaatttaattgagtaattgaagccaactattgaaaacaagctgaatta
ttttagccgTTAGTGATTAGATTTTAGCTCTCCCCANaagctgaattatt
ttagccgTTAGTGATTAGTTTTTAGCTCTCCCcaagtacataggtccccc
aaaaaagtggtgtacttccagccccctctttttggggaaaaatttAGGAT
GTGACCCCCTAACCCaaggggggctgacgctatgttaCAGACAAGTTTGA
TTCTGTTAAATTGTCAACCTTGTCCCAGTATACTTCTTACCAGGTTTTAT
GAGGTTGATTAATTTTGTATTATATATACCTTTAATATTAAATTATATAT
AAAAAAATTATATCTTTAATACTGATGAATATAGTCTTGAGTTTGCATGT
TTTCAATTTAATTTTCCATAGGATGTGAAGGACCAGAAGGAAAACCTGGT
AGACAAGGTATGATATATTTTTTCGAAGTTAGAACGTAACTGAGAAAAGA
GGATCTTTCCAACAAGTTCTCACTTTTAACAAGTCTCTTTAAGTTAAACC
CTATAACTCAAACAAGTTTGCTTGTCCCTTCAGTTAACTTTGCAGAACTA
TGCCTTATAAAATTCTTATGGAGACTTGAATAGCACAGACTTCAGAGCAA
ATTATTCTTTGTTTTTAAATGACAACCTTTCTGTTTGCAGGACCTGCAGG
ACCCCAAGGGGTAGCTGGACCCATTGGCCCTGAAGGTAATTATTTGTAAT
TTAAAGATATTGAAAATATCTATCTATTGTTGCTTGATCTTACTGGATAT
TTTTTTACCTGGTAGACCATATATTTTATAAAGCATTTTATTAACTGACA
CTTGGTTCATCATTTTGTTGCTTTTCAGCCTTTCTAATTCCAGGCCAttt
tcatgccctttaagcatccggttatcggacgctgcccctcttgaaattac
taaaattttgataaaaaccgtaaaaacagcctttttagtggaaaaacata
agaaaaagtGCCTTGCCTTTCtagggggggtttcatggttggcggaggag
cggaatcggcccttttttcggacggagNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcggaa
ttacggaaattgggttctctgacggagacggaaaattagacaattttagt
gcggaaaaacggaatttagcaaaaagatttgcggaatttcggaattagta
aaagatattcaaaatttgcggaattttcaacaaaaatattgaatttcaaa
ggaattttcggtgacagaattttggttcaatttaagacgatTTGACGGAA
TTTGGAGAAAAATTTGACGGAATTGCGAAAttgggtaccccctgaaaccc
ccccccctttctaaaatatggcctgaatTCATATTTATTTACATCAGCAA
AAAATTCTGGGTTCAATACTGTAGTAGAGTAAGCACTTTCACATTGGCAA
AGACAAATTTAAGGCAGGATTTGCTTCGGCAAGATTTGCATCCGCAATAG
CCAAATGCTGACGCAAATTAGAATggctctttttattttattacttCTGA
TTAATAATATTAGTAAGTTGTGATACACTGCAGATCAGAAGTTTTCCTAT
TTTTATTTTGGTATACAGTGGTTTAAAATTCAGTAAATTATTTCATTCCT
TTAGGACCaaaaggtgatgcaggagatgaAGGTATGCTAAATACATtctg
tcaaatatttttcttacttcAAAATAAGAACTGACAGGCTTGATTTGGCA
TTTTTGTAAAGCaattttttgatagttttataAACACAAAACCAACATTC
ATAAATCATAACTCGTTAATCATAACTCATAAATCATAATGTTTTTACTA
CAGGACCCACTGGACCCCAAGGAGATGAAGGAGCTCAAGGACCAAAAGGA
GATGCTGGAGAAGCTGGGCCTGAAGGACCAGCAGGATCAAAAGGTTTGAA
TTGTTTAATGACCCTGAATGACCTCCACACATTTATTAATTTACTGTAGA
AATTTATAAGCAATCAAAGGAAAAGGTAGAGCATTCAGCTAAGGTGCAAA
TTTGTGAAAGTTGGTTCTGTAAAGATTTCTGAAATATTGATTCACTTAAG
TTCaatttttcgtcaaaatttaTAGGTGATGCTGGGGCTGATGGTGCACC
AGGTGCTGATGGAAAAGATGGTTAGTAAATTATTCCCTGCGCATTATTCA
AATTTGCCAACATTTGCTATACCACCTCATATGTGATAGGTCGTTTTGAC
AGgtttaatataaaaaaaatgaatttattttctaatgaaccaaatttgat
aaatgacttATCATTATCAAAGTCTTTCTTTTTTCCAatgaaaaatgttt
aaattgatgaaaaaattcaattcaaaaagtttaaCTTACTCCTTGCACAA
CTAGTCCATGTTCCTTATTTAATGACATCTTTACactttttggttcaatt
taaaaACTTACGCTTGATTTaataaatcaccaaaatttgaaGGATATGTT
GAGGCTGACTCTAATTTTTCTCTCTAACTAAATACAGGAGCTGCAGGAAA
AGACGGAGCTGAAGGACCTGTTGGACCAATCGGCGCTGCTGGAAAAGATG
GTGAACAAGGTGAACTTTCAATCATTTTCACTGTCATCTTTAAAATAATG
GTTGTAGGAAAATAAGAgcttttttaaaataatatgtGGCTTTTAGTCAA
AACCtaacaacaaattaaaaattCCGACNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGATTGGATATAGTTAGC
ATACTTAGAacattttagcaaaaaaataagGACATTCAATTCTCAGCCAA
AATTCACTGGtttctataaaaaaagagtgtagagtgaattcatcaaaatt
atatttattaattCTATATCAAGTAAGGGAAGTAAGGGTTGATTAATCTT
AACGttgatatattttttgataatgactattaaattttttcttctttcta
ggTTCACAAGGACCAGCCGGACCTGCTGGGCCACCAGGACCACAAGGACC
ACAAGGTTTGACCTAAATTTTAATTGGTATTTAAGTTACTTTATCTTCAG
AATGTTACTGCTAttgatttttttgtctgtttaaacctaaaaacctaaaa
agggtaaattgaaattaaattgctATTAAAATAATGCTTACTCAAGGTGA
GGAAGGACCACAAGGCAAGCGTGGAGAACGTGGTCCACCAGGACCACCGG
GACCTGAAGGGCCAGAAGGACCTGAGGGGCCGCAAGGAAAACAAGGATTG
AGAGGTGAGGAAGTAGGATGTaatgaatgtttttttaaacaaaacattaA
TATGCATACACATCTTATACTTCCCAAAACCACCTCCTAACTACTAACCA
CCCACAATGTACACTTTTCTCTTAAAAACGAGGGTTGCGAAAATCAAACT
AGTTAGGCAACATTAAACTATTCAGGAGAGTTAGAACAAATCATTTACCT
GCAAGAAAAGTCATTTTACAATACAACTACCATCATCCTTaactatcttt
aaaaaaatgacaactCGATGTgacaaataaaacaaacaaagtcTGATTGT
CTGAGAATGATGGGGGAATGATATGAcaaatagtagggggccaagcctgg
ggtcctGTGACATCtttacgacctagccatttttagtctatttcaaagaa
cagtatataaaaagatatttttgagagggaagacgcggattaggcctggt
aaaactttttgtgaccaaaatagtgacgccataggcaaaactgcaaggaa
aaataaggggtagagaaatagcttattttcaaaagtcaaaataaacaaaa
atgattggtaccatctgatacagcatgaaattctgagcagtAAATTGTAT
TAtcacaactctctgactaacacacacaaagaaatacagcaagttgaagt
tcaaaaacataccgacgtccATGATCAAGACAATAGATTTGATGTTAaat
tacagtagagctgacagttagttggtctaTTAGAGAGCAGAGAGAAATAA
AAAACTCAAACATCATCATGCTTTACACACCTAACAAAACGAATACAGTA
TAGTTTTACAGCTCAACATACCTTTCACTGTACCGGGAATGGTTCTCAGT
CGAGGACCGAAACGtctacaaaatatattttgaaaatgaacaCCATATGA
CAAAATTAACACTCAAGGTTTATGAAAGGATCGATGTTATTACAATACGT
TTTTACTGCTCTTTGATACAATATGGAATACTTTGCGAGTAGACACGAAG
TTGACGTAGCATCAATTTGTTGAATTGCCTTCGAAGCTACAAGGCTCTGA
ATATCCTTACAACTTATTTCATACACTGTACACTTACCAACAACACTTAC
ACCTTATATCATTTCTTTTCAGTTTCTATCTATTTGCCAgaataaatttt
ctttgttgaaaAATCATCTAATGTTATAATTCCTTCATTTTTGTATCATC
TGGTATCATTGTTAATAAATTTGAGTGGACTAAACGTATgctatcttttg
ttttttaggaCCCCAAGGAGAAACTGGAACCCAAGGACCCGCTGGAGAAC
AAGGAACTGCCGGAGAACAAGGTCAACCTGGACAGCAGGGAGAACGTGGA
CCAGAAGGTGCTGCTGGCCAACCCGCTGAGGCCTAAGTCTTTTCGATTGA
ATTGAAAAGTACATTTTTCACGAAGATGTTGTAAAAACCAAAGATTGGGA
ATATTTTTATTGTAgagtttctttttgaaaaaactttttagtaTGTGTTT
GTTGGTTTAGGTGATAAATGTTTTTTCGAgttctttcaaaaacttttagg
cAAGCTAGAGAGAGCTTCTATGTATGCCTTGGATAACTTAGCCTCTTCAT
TCCCAACTGAAAATTGTGATGAGAGCTTTTGATATGTATAAACTTTCGCT
GTCTTTTTGTAGAGTTATAGAATTTGTTTAGAGATTTAAagtatttgttt
attttttagaatttatctATTATAATTagtatttgaaaatgaaattctcC
TTGCTTTTTAGttgtattcttactttttagttattttttaaatgaaacgt
CTAACGTTATAGTTAAGTTTGGTAGAAATTTggtagaaacttttttttaa
ttcatttcaaaattcaagataATAATGGTTCAATCTTGCActttgaaatt
aatttaaaaacaagtttctttttgatTAACGATTCAGTTTTTGATTGAGG
TGTAGGCATTTGCAGAGATTTTAATGGAGGTTTATTTCGCTAGATCTAAG
CTTTAATAACAAGAGCGATATGCAAGGTCACCAANACGTTTTTACCGCTC
TTTGATACAATATGGAATACTTTGCGAGTAGACACGAAGTTGACGTAGCA
TCAATTTGTTGAATTGCCTTCGAAGCTACAAGGCTCTGAATATCCTTACA
ACTTATTTCATACACTGTACACTTACCAACAACACTTACACCTTATATCA
TTTCTTTTCAGTTTCTATCTATTTGCCAgaataaattttctttgttgaaa
AATCATCTAATGTTATAATTCCTTCATTTTTGTATCATCTGGTATCATTG
TTAATAAATTTGAGTGGACTAAACGTATgctatcttttgttttttaggaC
CCCAAGGAGAAACTGGAACCCAAGGACCCGCTGGAGAACAAGGAACTGCC
GGAGAACAAGGTCAACCTGGACAGCAGGGAGAACGTGGACCAGAAGGTGC
TGCTGGCCAACCCGCTGAGGCCTAAGTCTTTTCGATTGAATTGAAAAGTA
CATTTTTCACGAAGATGTTGTAAAAACCAAAGATTGGGAATATTTTTATT
GTAgagtttctttttgaaaaaactttttagtaTGTGTTTGTTGGTTTAGG
TGATAAATGTTTTTTCGAgttctttcaaaaacttttaggcAAGCTAGAGA
GAGCTTCTATGTATGCCTTGGATAACTTAGCCTCTTCATTCCCAACTGAA
AATTGTGATGAGAGCTTTTGATATGTATAAACTTTCGCTGTCTTTTTGTA
GAGTTATAGAATTTGTTTAGAGATTTAAagtatttgtttattttttagaa
tttatctATTATAATTagtatttgaaaatgaaattctcCTTGCTTTTTAG
ttgtattcttactttttagttattttttaaatgaaacgtCTAACGTTATA
GTTAAGTTTGGTAGAAATTTggtagaaacttttttttaattcatttcaaa
attcaagataATAATGGTTCAATCTTGCActttgaaattaatttaaaaac
aagtttctttttgatTAACGATTCAGTTTTTGATTGAGGTGTAGGGATTT
GCAGAGATTTTAATGGAGGTTTATTTCGCTAGATCTAAGCTTTAATAACA
AGAGCGATATGCAAGGTCACCAAATCTTACAATTTTCCATGTGAGTTGAG
CGAAGGTTTCATCATGGCGAAACCACATAACCCTCTTATCTCTGTAAGCA
TAATCCATAAGGCTTTTTTATAATGTTTTATTGACGGCTTAttaaaaacc
tcaatttttttgttttataaaaaaaagaatttttattacTATTTAGATAG
CTTTAATACAGCGCcgataaaatatatatttaccaagactttgttaaaaa
aatacgCCTCAAGTTACTTGCTTTCGTTAAGTTTATTTTTAGTCCCTTTC
TGTAAACTGCAAATCTCAAAAGAAAGCTTTGTATAtataatcacatgata
acgagtgcaattcgaggaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033060XLOC_033060Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052237-exon-scaffold_213-1491911889:411258..411632TCONS_00052237-exon-scaffold_213-1491911889:411258..411632Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:411258..411632TCONS_00052237-exon-scaffold_213-1510915933:411258..411632Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:411258..411632TCONS_00052237-exon-scaffold_213-1575043694:411258..411632Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:413879..413914TCONS_00052237-exon-scaffold_213-1491911889:413879..413914Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:413879..413914TCONS_00052237-exon-scaffold_213-1510915933:413879..413914Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:413879..413914TCONS_00052237-exon-scaffold_213-1575043694:413879..413914Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:414148..414192TCONS_00052237-exon-scaffold_213-1491911889:414148..414192Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:414148..414192TCONS_00052237-exon-scaffold_213-1510915933:414148..414192Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:414148..414192TCONS_00052237-exon-scaffold_213-1575043694:414148..414192Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:415262..415288TCONS_00052237-exon-scaffold_213-1491911889:415262..415288Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:415262..415288TCONS_00052237-exon-scaffold_213-1510915933:415262..415288Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:415262..415288TCONS_00052237-exon-scaffold_213-1575043694:415262..415288Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:415461..415550TCONS_00052237-exon-scaffold_213-1491911889:415461..415550Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:415461..415550TCONS_00052237-exon-scaffold_213-1510915933:415461..415550Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:415461..415550TCONS_00052237-exon-scaffold_213-1575043694:415461..415550Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:415733..415777TCONS_00052237-exon-scaffold_213-1491911889:415733..415777Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:415733..415777TCONS_00052237-exon-scaffold_213-1510915933:415733..415777Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:415733..415777TCONS_00052237-exon-scaffold_213-1575043694:415733..415777Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:416145..416216TCONS_00052237-exon-scaffold_213-1491911889:416145..416216Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:416145..416216TCONS_00052237-exon-scaffold_213-1510915933:416145..416216Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:416145..416216TCONS_00052237-exon-scaffold_213-1575043694:416145..416216Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:417459..417512TCONS_00052237-exon-scaffold_213-1491911889:417459..417512Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:417459..417512TCONS_00052237-exon-scaffold_213-1510915933:417459..417512Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:417459..417512TCONS_00052237-exon-scaffold_213-1575043694:417459..417512Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1491911889:420105..421228TCONS_00052237-exon-scaffold_213-1491911889:420105..421228Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1510915933:420105..421228TCONS_00052237-exon-scaffold_213-1510915933:420105..421228Clytia hemisphaericaexon
TCONS_00052237-exon-scaffold_213-1575043694:420105..421228TCONS_00052237-exon-scaffold_213-1575043694:420105..421228Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:411258..421228 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.42739	2.4584	0.259494	0.151245	14.2342	8.27583	45.0933	47.0598	24.1989	25.2394	15.911	12.8214	7.49449	6.07119	18.5759	18.9477	22.2189	21.2745	1.46177	4.32025	58.3575	57.1858	62.3401	56.0353	27.1567	40.8123	73.6986	72.826	138.771	104.638
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052237 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top