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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052239 ID=TCONS_00052239|Name=TCONS_00052239|organism=Clytia hemisphaerica|type=transcript|length=2853bp
caaaaagcttcaaaataacATCTGCTTGAAGTTGAAAATCTTTTCACTTT
GCTCTAGCTTCAATAAATGTTCTTTCTCTTCTACTTTTTTGGTAGAGATC
AAAAACAGAGCAAGAAGAACGGTTATAGAAAAAGATAAAGCAGCATGGCT
ACAACAGATAACTTTGAAGGTATTGATCCGGCCTTAATCCGTCAAGAACA
AGCTTTAGAAGAATACGGTTTAATCGATCGAGTTCGGCTGTCTGAACCTT
TGTCGGGAGAAGATCCGAGTACCGCGACAAAAAGTAACAATTTCTTCTAT
ACTTACTCCTTAAAAGGAGATGGACGACGAACAACCATCGTATGTGTGAT
CTTTGTTCTTCTGTTTGTGGGTTGGACTGGTTACACTTTGTGTGAAGTCA
TCCTCCAACCTGCTGAGAATGGAAAGAAAACAGCAGAACAACATCATGAT
CATATTAGCAAATATTCTCATCCAGTTTGCGGCAAAATACAATGTGCAGG
CGATTGTTCAGAAAAGAAGCGTTCTCGTCGTGTGGTTAGCGGCGCCGATG
TTCGACACGGGGACTGGCCCTGGATGGCCGGCCTCACATTGGATAAGAAG
TTTCGGTGTGGAGGAGTTCTTGTCAATGAGTTGCATGTGCTGACGTCAGC
TCATTGTCTCTACCGAAGAGGAGAGAAATTGGACTCGAATCAAATTCAAA
TATTCCTCGGGAGTGTCCATCGCTCAGAAGAAAAACTCGAACCATCGAAA
GTAAGGCTTGCAGTAAAAGATTTGATCATACACAAACAGTTTGATCCAAA
AACTTTGGAAAATGATATTGCACTGGTGAAATTAACAGATGATGTGACTT
TCTCAAAGTCTATCCAGCCTGTTTGTTTACCAAAATATTCTGCTGATGCA
CCCGGTTACATGCTGGGTTGGGGTAAGTTCAAACCAGACGGTCCTCTTTC
ACCAAAGCTTCAACAAGTGAAAATGCCACTGGTCACCAATCAACAATGTC
AAAAGCagaacaacaaaattttcaggCGAGTCAAGGTTCACTCAGAAAAT
CACATTTGCATTGGTCATGGTGCGCAAAGTCCTGAATACGCATGTGCAGG
AGATAGTGGGAGTGGTTTCTTTCAACAGAAAAAAGGGATGTGGTTTCTAC
AAGGCTTGGTTTCCTGGATTGATCCCTCTTGCAATTCAACCCTTCACAAT
ACTTACACCGTGTTAACAAATGTTGCTAAATACGAAAATTGGATAGGTGA
AAACATACACCTTTAAGAAATATTTCATGGCCTGGCTtcaaaactgtaaa
aaaatttagagtaagtaagtaagtaatgaATTTATTTGTCATAATAAGCT
AGACGAGCGACCACATCAACTAAGGAGGCTGCATGCTACTGTTGCAAGAA
AAAATAGCccgggggtactacccttgctgactgacgggggtgctccgctg
aggtttgaaaaatggacctagttgggactcgttttttcaaaaattttgcc
gaaattttcagtgaccctgaatgggactgaaattccaaaattttttcaaa
tattacctACGAGAGAATTGTGTATTAACCCAAGGTTTTGCATGAGACGG
AACTTCTTTTAACTTTGAGGGGATTAATGTGTTATTTTAAGCTCCGTTTA
AAGTGAGTCTGAATGTTATTTATCAAAGGTCATGGGAAGTTTTCTAAACA
GTCTTCTTTGTCAAGAAGTTGGGAGTTTGAGCCCCCATCCCTGACGACGG
GACCTACGTTTGTGGACTGAATTAATTTTCCTGAAACTGTACATAGAAAC
GTGTAGTTTTCAACAATTCCAGACTGTTGTATAAAACTCCTGCATTCTGA
ATAGGGTGTTTAAGTTTTTTCCCTAAACACTTCCATCAAAGATTTTGTAG
CGTGTCTTACTCAGTCTTATTTCCTTTGATTACTGAGAGAGTTTCAAgtc
ttgaaaatttaaaatttgattaTTAGTAATAGtataggcgagaccaattt
aatttgttgttctacgggcagatcgttagaaaaatatgggtcggtcggta
aaacaagaataaatttttcatttatcagggttggtaaggtaccgaaaata
ttttccaaaaaatatctggatcaacaattcattatttttatgttcgatga
agatcataataagattttagtgtatggaatgcttgattttctaaattttt
caattttttgaattcattttcagctttatcatattcaaattttattctAT
TGTACTGTAGTTGAAATtcaatatcattattttttttatttaagccAAAA
TTAAGTACAGTAGCACAACAAATTGAATTGGTCTCGCGGTCTCGCCTAAT
GTACATAGTAATATTAAGAGGTTTTTATTTACGCTCAATTTTTAACCCAC
CTACAGCAAATTATTtacaacaatttttttattgagATTTTGACGGATTC
ATTTTATATATATTTGGATAGTGTACTTAAGGGTTATTTTATTTCAGTAT
TGACGGTTTGAGCTTATTTATATTGACTTGACAAAGCGTCCAGAGTTGCA
GGTTTTTAGTTGAAATGGGACTTACATTTTCTCATTCAGTTTTGAGAGCT
TTTGCAAGTCCTTTCGTGATCACTTCGCCTACGGCGTTTATTGGATAATT
TATACTGTAAGTTATTTCAACAGATTTTATTTGAGTTATATATTTATGAT
TTGATATTAAGAttaagtactctcgggtacttaatagccgggggggcccc
gctaattaatttttcgaaaattttccacccaggacattcttattccaccc
ccccccccgcttattgatttttgggaattttttttttgaaagttctctct
ttt Run BLAST on NCBI transcript from alignment at scaffold_213:422499..429857+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052239 ID=TCONS_00052239|Name=TCONS_00052239|organism=Clytia hemisphaerica|type=transcript|length=7359bp|location=Sequence derived from alignment at scaffold_213:422499..429857+ (Clytia hemisphaerica)
caaaaagcttcaaaataacATCTGCTTGAAGTTGAAAATCTTTTCACTTT
GCTCTAGCTTCAATAAATGTTCTTTCTCTTCTACTTTTTTGGTAGAGATC
AAAAACAGAGCAAGAAGAACGGTTATAGAAAAAGATAAAGGTATaaagtt
ttcatatttttggctttttttatttgaaagtggTTATTGGCAGCGCTTCT
TGTAAAAAACAGAACATCACCCAAAATACGACAATGATTTATTTGTCATT
TCAAAGATCGCGCACATGTGTCTATTTTGCTGATGCTCTCTTTTTCAAAT
AGATTTTTAAGCAGTCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAA
AgggtataaaaacaaaaagcttcaaaataacATCTGCTTGAAGTTGAAAA
TCTTTTCACTTTGCTCTAGCTTCAATAAATGTTCTTTCTCTTCTACTTTT
TTGGTAGAGATCAAAAACAGAGCAAGAAGAACGGTTATAGAAAAAGATAA
AGGTATaaagttttcatatttttggctttttttatttgaaagtggTTATT
GGCAGCGCTTCTTGTAAAAAACAGAACATCACCCAAAATACGACAATGAT
TTATTTGTCATTTCAAAGATCGCGCACATGTGTCTATTTTGCTGATGCTC
TCTTTTTCAAATAGATTTTTAAGCAGTCTAATAAACAATTTGATCACGGG
AAATTTGCATTTATTTAGATTCatccaaattttcaataagttgAACTATA
ATTATGCTTTGGCATTTTGggatttcattttaatttaaaaatgttGTCAT
TTTACTCGTTgtttatttaataatttttttttattttgttccaGCAGCAT
GGCTACAACAGATAACTTTGAAGGTATTGATCCGGCCTTAATCCGTCAAG
AACAAGCTTTAGAAGAATACGGTTTAATCGATCGAGTTCGGCTGTCTGAA
CCTTTGTCGGGAGAAGATCCGAGTACCGCGACAAAAAGTAACAATTTCTT
CTATACTTACTCCTTAAAAGGAGATGGACGACGAACAACCATCGTATGTG
TGATCTTTGTTCTTCTGTTTGTGGGTTGGACTGGTTACACTTTGTGTGAA
GTCATCCTCCAACCTGCTGAGAATGGAAAGAAAACAGCAGAACAACATCA
TGATCATATTAGCAAATATTCTCATCCAGTTTGCGGCAAAATACAATGTG
CAGGTATTGTGGTAttattgttttctatttttctcttATGTAGGGCCTAT
GTAGTGCGTCTGAAAGAAAGTGGAACaaattgaatttaaagaaaaagcct
caaaatgttaaCCTCCATATAACGAGATCTTTGCATTGTCGATAAGTTTC
ATTGGCCTTTATAAATACAAAACTTATGAGGGCTTTTccatattcaaaat
ctgatttttGTGACAACATTGTATTATTCAGCGTTTTGTTACTAGTAGGG
GGTTCGGAGCAttgatttataaagcccgaagtgctagatatcgtgcttta
agccatcgcaagCAAAAAAAACGAATATCGGAGGATTTCCTACTTAACCA
CGACACACTTTTCAGccgaagcacgacatctagcccttcggagtAGCTGG
TATGTGTGAATAGATTTTCTTCTGaaataaaaacgaaaatgataaaaaat
atgggTTAGAAAAAGGGTGAAAAGGCAACTCTTTTTTTAATGCACACTAA
CTCGACCAGCAATAAGACATAAATAAAGTTGGAATTTACCCCTTGTTTTT
GTTCGTTCATAATGAGGATTGATAATCCACATTGTGGGTAAGAAAATACT
TTCTATTAGACTACCTACGTGCGTATCTTATTGTTTTGAGGTATATTATG
ATATTAATTATCACCTGCGTCTTTTCAGTgctaaattattattttatatt
ttaccaaCTGCCTTTTAGGGGACCGCACCCTCttttattagcgagtttat
atattcgagataaatcgagggggacagtataaagcaaagttgacatgtct
ccaaaatcaccgtccactttgctcgacgacggtaaaaacaccaaaataac
gtcgtctgtttaggtgagcaaaggcgatatagagccgtacatcaactatc
gtttttgttttgtatcatttcacttacTGTCGCCCtagatatcctccgat
acataaactcggtattatctTTACTGGtgccaaaaaacaatttttatttt
tccggaaCTATCGATCGTTTTTATGTGACCGAAAAAGTTTATCAATCGCA
CCTCTTTCGTCCCaaagtttttaaagatttcaaGAGCGTGTTTTGGCAAC
TAAGTATTAGTCAGCGAAGGGAGGAACTTTTGCATCAAAACAAGAATTTG
AAGATATATAAACAGTTCCTGTGAATTCTTTCAGAAATTGTTTCATAACT
AGGCTCATAAAATGATCTTACTAGATTATTTGTACTCCATCGGTGAATAC
TTTGgcgtgtttttctttttcaaacattttgtcGTTTGGACCCTCTAGCT
TTGGGAAGAGTTTTCACAAATGTTACAATTAATATTCTCAATAGTATTTA
GAAAACAGTATGATTGGGTTCAGTATACTTAGCTGTGTAAGTTttattat
gtttaaaaaaattgcaagaacAATGAGATCAACCGATAGAAAACGTACTG
TTTCGCCATTATAAGCTTTCTTTCCTTCCAATAGGCGATTGTTCAGAAAA
GAAGCGTTCTCGTCGTGTGGTTAGCGGCGCCGATGTTCGACACGGGGACT
GGCCCTGGATGGCCGGCCTCACATTGGATAAGAAGTTTCGGTGTGGAGGA
GTTCTTGTCAATGAGTTGCATGTGCTGACGTCAGCTCATTGTCTCTACCG
AAGAGGAGAGAAATTGGACTCGAATCAAATTCAAATATTCCTCGGTAttg
tttttcaatcaaataCTTCTTTTGCTCTTATTTCACTACTACTCCATTat
atttgaaaatctttctgCATGGCAAAGTACCAATGCAAGAAACGAACAGT
GCGCAGCGATTGAAATactattcaaaaactttatgCGAGCccactttttt
tcttcagaaataattaaatattttaagaacTTGAGGCTCGATTCTCGTAA
GTTTTGACACAGTTACGTAAGCTAAATAAGACTCTCATAAGTTTCAAAGC
ATATACTGATTTTCGGTTTTCGGTTGACATAAGGCCATTTTATCTTGAAA
ATCTTATGCGAATACGTATTATTACAGAAAATCTTATACAAATGCCTTTG
TTACAGTGTTCCAAGGTTcaagtttctttcttttcaaacgGATTTTCATC
TTTCCATGTTAAATAATATTTGTTTCAAATTTACTTCAGCgaaattcaat
caaatataTTGAATCTTAGCTAAATAATTTCCTTTGTGAAGAAAGCTTCG
CTTCGACCACAAACGAGGTATAANccactagatcaaaagttaaggggtgg
tacaggatcAGCccctgaaccgcccctaaaagcataggttgaatagggtt
ataAGATAAGGTAGTTTCTTTTTTCACTCGGTTGTATGTTATTATGAAAA
TCCAACTTTTCCATTTGAAACTTTAGGGAGTGTCCATCGCTCAGAAGAAA
AACTCGAACCATCGAAAGTAAGGCTTGCAGTAAAAGATTTGATCATACAC
AAACAGTTTGATCCAAAAACTTTGGAAAATGATATTGCACTGGTGAAATT
AACAGATGATGTGACTTTCTCAAAGTCTATCCAGCCTGTTTGTTTACCAA
AATATTCTGCTGATGCACCCGGTTACATGCTGGGTAAGGCTTATATccaa
atgttttaattttttttatcaatgggctcttccagaaaaaaaaccattAT
AGGGGATGGAAGATATTTTGTCTAGGGGTATCgaaaaaatcccgaaaaac
TGTCATGTCCATAAGGTGAATTTGTAATGTCCAGGGGTGAATTTTAGTGA
CCAGGGGGTCGAATTGATGTTTGCTCAGGGGTAAAACGCGTGTCCAGgag
gtgaaaaattgaaacgtCCAGGGGCAGATCATTAAAAAAATAGTATACCT
TCCAcccccatgaacgaattttttctggatGAGCCCAATCAAAAGACTTC
TACAAGCATCGATCAATTACTTGTTCGATACCTTGACATTAACAAAATTG
TAAGATGATCCCTTACTACCTCCCGCATAAAACTcaatatacccctgtct
cgctGAGTGCTTGGCATCTAGATTTCAAAAGTGGTTGCTAAGAAGACATT
CCACTATTTTCTAATTTGATTCACCAGATTCAACTCTGGACGACTTCACT
ATCATTGCCAGAAAATTTTTCCATCGTGGCGATTTGTTCCCATTAAACCT
TGCTATGACATTGGTTTTTTAAAAGCGGTTATTATTGAAGAAAACGTACG
ttatacatatatttttcaacaGGTTGGGGTAAGTTCAAACCAGACGGTCC
TCTTTCACCAAAGCTTCAACAAGTGAAAATGCCACTGGTCACCAATCAAC
AATGTCAAAAGCagaacaacaaaattttcaggCGAGTCAAGGTTCACTCA
GAAAATCACATTTGCATTGGTCATGGTGCGCAAAGTCCTGAATACGCATG
TGCAGGAGATAGTGGGAGTGGTTTCTTTCAACAGAAAAAAGGGATGTGGT
TTCTACAAGGCTTGGTTTCCTGGATTGATCCCTCTTGCAATTCAACCCTT
CACAATACTTACACCGTGTTAACAAATGTTGCTAAATACGAAAATTGGAT
AGGTGAAAACATACACCTTTAAGAAATATTTCATGGCCTGGCTtcaaaac
tgtaaaaaaatttagagtaagtaagtaagtaatgaATTTATTTGTCATAA
TAAGCTAGACGAGCGACCACATCAACTAAGGAGGCTGCATGCTACTGTTG
CAAGAAAAAATAGCccgggggtactacccttgctgactgacgggggtgct
ccgctgaggtttgaaaaatggacctagttgggactcgttttttcaaaaat
tttgccgaaattttcagtgaccctgaatgggactgaaattccaaaatttt
ttcaaatattacctACGAGAGAATTGTGTATTAACCCAAGGTTTTGCATG
AGACGGAACTTCTTTTAACTTTGAGGGGATTAATGTGTTATTTTAAGCTC
CGTTTAAAGTGAGTCTGAATGTTATTTATCAAAGGTCATGGGAAGTTTTC
TAAACAGTCTTCTTTGTCAAGAAGTTGGGAGTTTGAGCCCCCATCCCTGA
CGACGGGACCTACGTTTGTGGACTGAATTAATTTTCCTGAAACTGTACAT
AGAAACGTGTAGTTTTCAACAATTCCAGACTGTTGTATAAAACTCCTGCA
TTCTGAATAGGGTGTTTAAGTTTTTTCCCTAAACACTTCCATCAAAGATT
TTGTAGCGTGTCTTACTCAGTCTTATTTCCTTTGATTACTGAGAGAGTTT
CAAgtcttgaaaatttaaaatttgattaTTAGTAATAGtataggcgagac
caatttaatttgttgttctacgggcagatcgttagaaaaatatgggtcgg
tcggtaaaacaagaataaatttttcatttatcagggttggtaaggtaccg
aaaatattttccaaaaaatatctggatcaacaattcattatttttatgtt
cgatgaagatcataataagattttagtgtatggaatgcttgattttctaa
atttttcaattttttgaattcattttcagctttatcatattcaaatttta
ttctATTGTACTGTAGTTGAAATtcaatatcattattttttttatttaag
ccAAAATTAAGTACAGTAGCACAACAAATTGAATTGGTCTCGCGGTCTCG
CCTAATGTACATAGTAATATTAAGAGGTTTTTATTTACGCTCAATTTTTA
ACCCACCTACAGCAAATTATTtacaacaatttttttattgagATTTTGAC
GGATTCATTTTATATATATTTGGATAGTGTACTTAAGGGTTATTTTATTT
CAGTATTGACGGTTTGAGCTTATTTATATTGACTTGACAAAGCGTCCAGA
GTTGCAGGTTTTTAGTTGAAATGGGACTTACATTTTCTCATTCAGTTTTG
AGAGCTTTTGCAAGTCCTTTCGTGATCACTTCGCCTACGGCGTTTATTGG
ATAATTTATACTGTAAGTTATTTCAACAGATTTTATTTGAGTTATATATT
TATGATTTGATATTAAGAttaagtactctcgggtacttaatagccggggg
ggccccgctaattaatttttcgaaaattttccacccaggacattcttatt
ccacccccccccccgcttattgatttttgggaattttttttttgaaagtt
ctctctttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052239-exon-scaffold_213-1491911889:422499..422638 | TCONS_00052239-exon-scaffold_213-1491911889:422499..422638 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1510915933:422499..422638 | TCONS_00052239-exon-scaffold_213-1510915933:422499..422638 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1575043694:422499..422638 | TCONS_00052239-exon-scaffold_213-1575043694:422499..422638 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1491911889:424343..424701 | TCONS_00052239-exon-scaffold_213-1491911889:424343..424701 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1510915933:424343..424701 | TCONS_00052239-exon-scaffold_213-1510915933:424343..424701 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1575043694:424343..424701 | TCONS_00052239-exon-scaffold_213-1575043694:424343..424701 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1491911889:426183..426392 | TCONS_00052239-exon-scaffold_213-1491911889:426183..426392 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1510915933:426183..426392 | TCONS_00052239-exon-scaffold_213-1510915933:426183..426392 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1575043694:426183..426392 | TCONS_00052239-exon-scaffold_213-1575043694:426183..426392 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1491911889:427075..427281 | TCONS_00052239-exon-scaffold_213-1491911889:427075..427281 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1510915933:427075..427281 | TCONS_00052239-exon-scaffold_213-1510915933:427075..427281 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1575043694:427075..427281 | TCONS_00052239-exon-scaffold_213-1575043694:427075..427281 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1491911889:427921..429857 | TCONS_00052239-exon-scaffold_213-1491911889:427921..429857 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1510915933:427921..429857 | TCONS_00052239-exon-scaffold_213-1510915933:427921..429857 | Clytia hemisphaerica | exon |
| TCONS_00052239-exon-scaffold_213-1575043694:427921..429857 | TCONS_00052239-exon-scaffold_213-1575043694:427921..429857 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_213 | supercontig | scaffold_213:422499..429857 + |
Blast
BLAST of TCONS_00052239 vs. Swiss-Prot (Human)
Match: PRS48 (Serine protease 48 OS=Homo sapiens GN=PRSS48 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 2.008e-33 Identity = 89/261 (34.10%), Postives = 130/261 (49.81%), Query Frame = 1
Query: 505 CSEKKRSRRVVSGADVRHGDWPWMAGLTLDKKFRCGGVLVNELHVLTSAHCLYRRGEKLDSNQIQIFLGSVHRSEEKLEPSKVRLAVKDLIIHKQFDPKTLENDIALVKLTDDVTFSKSIQPVCLP---KYSADAP-GYMLGWGKFK--PDGPLSPKLQQVKMPLVTNQQCQKQNNKIFRRV----KVHSENHICIGHGAQSPEYACAGDSGSGFFQQKKGMWFLQGLVSWIDPSCNSTLHNTYTVLTNVAKYENWIGENI 1257
C + S RVV G D G WPW L D F CGG LV+E +LT+AHC+ + ++LGS+ + + +V+ V ++IH ++ T D+AL+KL+ VTF+ +I P+CLP K A P ++ GWGK K D LQ+ ++P++ Q C++ N I + V E+ IC G Q+ + +C GDSG G+W G+VSW C +L Y TNV Y+ WI I
Sbjct: 19 CGQPVYSSRVVGGQDAAAGRWPWQVSLHFDHNFICGGSLVSERLILTAAHCIQ---PTWTTFSYTVWLGSITVGDSR---KRVKYYVSKIVIHPKYQDTT--ADVALLKLSSQVTFTSAILPICLPSVTKQLAIPPFCWVTGWGKVKESSDRDYHSALQEAEVPIIDRQACEQLYNPIGIFLPALEPVIKEDKICAGD-TQNMKDSCKGDSGGPLSCHIDGVWIQTGVVSW-GLECGKSLPGVY---TNVIYYQKWINATI 266
The following BLAST results are available for this feature:
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