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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052246 ID=TCONS_00052246|Name=TCONS_00052246|organism=Clytia hemisphaerica|type=transcript|length=2361bp
CCAGAGTCGAAAAGTGAGAACGATTCTCAAAATAAATAATGTGGGCACCG
ACTTTTCCTGCTGATGCCTGATCAAGTTTAgtaaaaaaagaacagaaaca
aaaaagaatgaacactTTGAATATAATTGGTGTTGTGATCCTTGTGTCAG
TGTCTATTGGAACTGTTTACTTTTATATGTTCAACTCACGTGATTCCTAT
GACGTATCTTACTCTCCGGACTCGGGTGGTTCAGAAGACCACATCCTTGA
AAAAGCTCGAAAGATGATCATTCAAAGCATCCGAGGGTCGAACATTACGT
CACAACCAGTCATTGCCAACAAGAGAAATGATTTACTTTACAACAAACAG
AACACCCCTTCtctacagaaaaaatcaattagAGATCGGCTAGGTATGAT
AGCTTATATACCACACTCTCTCCAACATGCGCACCAGTTTCTAGTCTTGT
TACATGGGTCATGGAAATACATTGTTGACCACCAAAAGGAGTTATtccca
aataacaataatcttGATTCGTTAAATGACCTAGACCTTTTGGCTTTCTG
TCATCCAAGTATTTGTAAAGAACTCGCCCATGTGTGCACTGTTATTTCAA
ACTTACAAGAAATTACAGCCACGACTGTGCAGCGCTGCTGGGCCGTCATT
CAACCATTCGAAATTGACATTCCCTACGGGCCTCTCAACTCGTTCATCAT
GTTTAATCGCACGGATATTGGCGAGTTGAAAACTCGTTATAAGTACATAC
TGAGAACAGATAATGATGTCTTTGTAACGCCAGCCATGTTTAAACTGAAA
CCTAAAGTCTTTCTTCACGGCCACGGAGGATACAGCGACCCATTCAATAT
GGCGCGGTTAAAACAAGTGGCGGCGCGGTTACACATGACGCACCGGGGGC
GCCACGCTATTGGTTCAACCTGGTGCGGAGAAACGGCTCAGTTTCTAAAA
CTTGCCAAAAGGACTTTGGAAGTGACCCGATATGTCTGGTTGAACGAGTT
TGATCCAAACGCGAAAGGACTGGAAACGattccttttgataaaaaccGCG
AGGGAGAGTGGATTCGATGGTGGAGACCTGTTTCTttactctacggtgga
gagatcACACTCAATCACATGATCACGGATATTTCGGAGAAGAATCAAGG
AAAATTCGATTCTTCGTCCTGCGATACTGTCAGTGTGTGGACCACGCCAC
ATATTCATTGCTGGCACAATGATTGTGAATTCCAGAAATTCAAATTCTCT
AAATATCTAAACATTGCTATATACGGGCGTGCCAGTGAGACACTCCCTGG
CACCATAGTGCATCGGattgttgaaaatatttattcacaAGACGTCAGTA
AAATGAACTTGCAGCAGTACTCACAGTATATTGCTTGGAATTCCGTCTCC
AAATACCTTCGTAAACGATTCGTTTaactttttaaacaaattttagattt
tagtgGTTTTAATCCTTAGAAAAACAcgagcttttgaatttttttttaac
gcATAATGTGTCAAAAGTAAATAAGgtcaaatggttgttttttaaACTGT
ACTGATCAATGGCTTTTCAAACCCTTTCAATTTACCTTTTCCTTCAAAGT
TTTGCCTACTGACAAATTCTTACAACaagctacacgtttttataagaaca
aactaaagtAAGAACACGATGcgtcgatggtcaaaatattaagaacaatt
tcagaacattttaaaactttaaaatacccaatttcttataaaattgcaCA
AGCTGGTGTAAATTGAAAATAAGTAAAGGTTAAGAACATgatcttaaaac
tcaaaatttgagAACCTTCAAAAGATCTCAAAGATTTCTCATGagaatgt
tcttttaaaaagcgtgtataagtATCAGTTTGTTTCTATTGAAGACAAAC
TTTCAATTGCAAGAAGTCATCAagttttaccaatatttttccCTTATATA
AGTCTAATtggtgaggttaagtaaatcggtatcacgacgacggacgaaaa
taTCAGTCtggtgagtttcaaccaatcaaatttcgtattttcactagcct
gtTACATTTTCGTCCGCCTCGTGATTATCCCagtatacttaacctcacta
ttacTTCATCTTCGTGACGTTAACATTCAACAGATGTTTTTTATTACTCC
TTTCAGaggtttttatcaaaaaattttccagcATATATTCGCATTTATCA
ACCTTTTTAACATATGTATTCTaagagagaaatttttaatatattttaca
GATTTATATAGCtataattataattattatCATTAATATATTTACGGAGA
AAATTATTTCCTGAAAAGTTCAAAGACAATTATTCAACTTGAATATCAAA
CTGGAATAAAG Run BLAST on NCBI protein sequence of TCONS_00052246-protein >TCONS_00052246-protein ID=TCONS_00052246-protein|Name=TCONS_00052246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
MNTLNIIGVVILVSVSIGTVYFYMFNSRDSYDVSYSPDSGGSEDHILEKA
RKMIIQSIRGSNITSQPVIANKRNDLLYNKQNTPSLQKKSIRDRLGMIAY
IPHSLQHAHQFLVLLHGSWKYIVDHQKELFPNNNNLDSLNDLDLLAFCHP
SICKELAHVCTVISNLQEITATTVQRCWAVIQPFEIDIPYGPLNSFIMFN
RTDIGELKTRYKYILRTDNDVFVTPAMFKLKPKVFLHGHGGYSDPFNMAR
LKQVAARLHMTHRGRHAIGSTWCGETAQFLKLAKRTLEVTRYVWLNEFDP
NAKGLETIPFDKNREGEWIRWWRPVSLLYGGEITLNHMITDISEKNQGKF
DSSSCDTVSVWTTPHIHCWHNDCEFQKFKFSKYLNIAIYGRASETLPGTI
VHRIVENIYSQDVSKMNLQQYSQYIAWNSVSKYLRKRFV Run BLAST on NCBI transcript from alignment at scaffold_213:504596..520421+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052246 ID=TCONS_00052246|Name=TCONS_00052246|organism=Clytia hemisphaerica|type=transcript|length=15826bp|location=Sequence derived from alignment at scaffold_213:504596..520421+ (Clytia hemisphaerica)
CCAGAGTCGAAAAGTGAGAACGATTCTCAAAATAAATAATGTGGGCACCG
ACTTTTCCTGCTGATGCCTGATCAAGTTTAGTAAGTATAAATTAGGCTAT
TCCATTTCTAACCATCATAGGGCCATCGACACTTTTCCAGGGAGGGGGCG
GTGTTGGACTGGATACTTTTTCCAAGaggtttttgttcatttttcatatt
ttccagcagtaatatagaccttttttcaaagaggccaccctgttgaataa
ttatgtagtccagccaaaaaacaatgataaaaccatacataattattaca
atatgcatgatacagtaattatgcatggctctatcattgtttttatggct
ggactacataaatTATTCAACAGCAACAGGTGACAGggcgtcctctttga
aaaaagacattcggctaaagcttcagatgcatccggctggactttttttc
aagttgaataGTGACCGGTGAaagcttcttcgtaaagacgaaagacatgt
atctatttttcggatccggtatgcgggaatagtgtcaggacctgcaggcg
acctggtagggttgggtatgggtgtggtttgggtgtggttatgtaccaga
ttggctaggaattgggttattaacagttagggttagggttggagctcgaa
acaagcactcttttgtgattttctcttagtacagtctggtctgcagtttg
tacaatataaatagctgTCAGAAGCACTATCCCAGCATGagtccgtggcg
cagtggataaggcaatgggtttcaaaacatcggtactttgcatttagtgg
gttcgaatcccaccggtggcgatctgtcggtaagtcattcagtaagttag
aaaacatagataataactcacaaagaaccagaaagtcagaaaaactacga
acagtATACTTACTTCAGTATACTTcagtttgatttgatgatattcATCT
GTCCAGCTCGTTGAGCCCAACACGTATTATTTGATCGAGAAGAGCATTTG
ATTCAGCCAATCTTGTTTGTCGCGACGTAGTGTGAGGTTCGTCGGGTATA
GAGCACAGATATTTATCGAGTCGTTTCTTGAAGGAATCTTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGTACAGCTAAGCTCTCACAAATAAA
TTTGCGAAAGCTACTTCGTTCGATTGTTCGTAGTTCGCATTTTCGACCAT
GACGGCTTGTAGTTGAAGACAAGACACCACCTTTTACAGTGCCATCTCCT
TCGgtgtggctgaaatttggtactatACCCTCTAGTATTGACCAAATATA
AATAATTCTGTATCTCTCTCTCCTCCTTTGTAGAGAatacattttcaaca
ttttcaattgtTCCCAATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTTA
ACCTTGAAAATAGGAattgatttcggacgggacaatTTTCCTGTAAAAAT
AGGTATTGTATTAAAACCACTACTGGAACAAAAAGAGTGGAAGACTCTCA
AGTATTTTCTATTTGGAATAGTAGTATATTTACTTGTATACTTACTTATA
ATATgtagaaagaaaaagtttagcaaaacttgaaataaaacagattttta
tgaaaatgatttggGACGGGACAGGAAAAATTTAGTGCAAATCACcctga
aaaaagatgaaaaaggtgatacagatttttaagatttattCTAATTTGAG
GAAGGCCTTTATACAAACAATTTCAGGCTGTTCTACAACTTCCTTACTTC
CTCAAtacatttttctgatgtattctAGCCTTtagttttgcaaattttgt
cgGTCCGAAATCATTTTCGATATCTACATGCCAATCAAAAGAATGCAACA
AAAAAAGGATTTCACTAAGTTTAGTGATACTTAAATATCACCTGTTACAA
CCCTTATAATATGTGATACTCTctacagttttgattttttttaccaccaa
tTTACCATTTTCATACGCTCTAACAGCTCCATGAGcccctatatctttat
tattagGCCTTAAAAGGTGGTGTCACAGGTACATTTCCATGAAATATAGG
CTATAGACTGTCATAGAAAAGTAGagttatgtttaaaaaatgaactttat
ttttcatgatttcggACGGCACACGGTACAGATTTAGCGCAAATCGCcct
ctcgtttacccaaacgcttcaatttcgcgtaggcttaggggtcaagacta
gaacccccaatacgagacatttgcctgaccgaaaaaaaatcatcatcatc
atcaattttgttaattgtcagaatcgtttttcactggaaatacgcaactt
tctgaagtttcgttgtttttcggttgtgcttcattttaaaaataacgaag
atgaaaagttaccatcaatcccgcgagtaaaagaaagtattccgactagt
ctacgaaaagtatatgcaaaatatatgcataaaactgacaaaatcctttc
tttttatgcttaggtgcatcaccatcgatcctgacttgacaatggagaac
caaatttgacaatgcataattattacgagcagccgagaaagtttgtgtga
cgcaaaaattgcgcgataaacagggggggtcagtactaaaatgtaagaca
tatattcaattcaattcaattcaaagtaatttattcgcctgcatatcatt
aaaaatttacatattttaagtttgtataaattagggGAGGAATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTCTCGAATTTCTTCGATCGTGGTTAAATCA
GAGAATGAGGGGTGGAAGTAGTTGTACCtgaaacttttttcatcaaGCTC
ATAGCAAATACTAAAAGGGAAAAGATCGCAGTTGCAGTTAACGCATAATC
CGACTTGTGGATAGTTTATTGAGAAAGGGATATTGCATTCATGGTGAAAC
CATTTCTGACAGTAGTCACAAAAAAAGGAAGGAGCTCCTTCCGCTAATTC
CTCACATACCGCACAAATTAGGTCCATCTATGGCAAATAGAATAAgtttt
aaaattctcaaaatatcaagtaaataaaagttttaagttcgaatgagtac
taaaaggattttcgctaatttttgacatacccccacctatttttcgaaaa
tgttattttagtatacatgtactaaaattattttgagcaatttaacatag
ataccacccattttttggccttttacgggtttaaatttaccaaaatgggg
tcattgttacaaacctagtcgaatttagcgcatcaatctgcaaaataata
taattttattactaaactgtgctaaactgtacataaaaatatttttaaaa
agtatttattaaaaaattggaaaaattctgaaagatttctgaagattttt
tcgaaaattcctgaaaaaaaaaatttttcctggaaaaaaaatttttttcc
aaaattgttaaaaaaatgctccattttggctgattttagaacaaaatact
aagatttttaaattatttctttaagggaccaccctttttggtattttagt
acacatggtactaaaattatttttgagcttttttgcagtaccaccacgtc
actaaatgtcatgatGTCTGAGATTTTAGTACCCGCCCCCCCCCCtgcga
taaacgaagccctagaaaaacgcccactgaaaattgaaactaggaattta
ttgaatattttcacTAGATAATATATTTCCTTGACAAGTTAAAAATTGTA
CATAACTCCGAGTTTCATGCTCTCCTAGCAATCGTCAGATGTCTAGGAGA
GCATGAAACTTGGAGTTAGTTATGTACAATTTTTAACTTGTCAAGGAAAT
ATATTATCTAATGGAAGCTCTATCTTTGATTTTCTCTGGTATTGAGCACT
TTACGCATTAAATTGTTCACCAAACAattaattgaatatttcactaatga
agtatcaaactttttgttttttgtaattattataaattcataatttttaa
ataacaaTCAAATAAAGgtgaaatcatattcaaagagtgctcgataaaac
caaccaggagtagagcttctttaatcaaaaatacatttcaaaaccaaaaa
atttaaattatccataactcggagtttcatgctctaagcaatcatcagat
gtaactaaaaaattaaaaagctgtgtGAAAACATATGTTACAAAGTTGGT
AAAATGCTGATTAAAAAGtcgtaaaaaagtgaaaaaatcgtaaaacTAAG
AATTGTCACGAAGGACATCAAATGTGTCCGGAGGGAcgtctttaaagttt
tttaaaaagaatttgctCATATGACGGCACGTGGAGATTAGTtcggttct
tttgtttataagtttgtctttgtattgtattttatgatgtcatcaaaaat
tttggtaGAAAGTGTCAATTTAgtgataaaaatgacaaaagaaaatgtca
ctCCTTTTCTTGCTCTAAAAGCATCTCTACAGATTTTCCAAGGCTAAAGA
CTGTAAATTTGTATCCTTTTGTACAATGTGCATCACTTTcagtataataa
atctttttggAGGAATTTGACTTGCGATTattataatttcaatatttttt
aaatatttttgcaagAAAGTGTCATTTTTTGTCAGCATTCTGAcatgtaa
aaagaaaagatattaACAAGATGTTACTAGCCATTACCTTACAATTCTCC
TGGTTTTAAGCTATTATATGATGTTGGTTACTGGATTGgattgtttggtt
tggttaTTGAATTTATTCTGGTCTTacttattctggtctgtaaatttttg
aAGTAGGAAAGGAGAAAAGCAAGATGGCGGCTGATTTAATTAAAAAGCAG
TAGATTTTCACTTTGTGTCGGAAAACGGCAATTGTGACAAAAGTTTTGTG
ACAATATTAAATCTAAGTTTATTAAATCATCAATGAAAGATTGTAGCACC
TTATTATAATGAAATTTTAAGTgtcaattaacaaaattaagGACAAAAAG
TGGTACCCCAACAAGTATCCCAATTGGTGCACCAATTGGGGTACcatgct
ttttaaaataacccaatatcttttggcattggcaatcaaatataatatat
tatatatacattatatttcttttatcaaaaatcaaaaattcattcattca
ttttcattccagaaaaataaaaataaaagacgcccccgtcttttactctt
gTCTAATTTCAGATCTCTGGACATGCAAAAAACGCctgtccgcccaatat
ccacccaatcatcttaaattcactttcaatcgtcctttgactttcaaaaa
atagtatttaaaaactatgaatttataataattacaaaaaacaaaaagtt
tgatactttattagtgaaatattcaataaattcctattttaaattttcag
tgggcgtttttctagcactttgtttatcgcgcaattttgcgtcacacaaa
ttTTCTCGGCcgcttgtaataattatgcattgccaaatttggttctccat
tgtcaagtcaagATCAATGGTGatgtcacctaagcataaaaaagaaagga
tttcgttaGTTTTCTGTATATATTagtttgcgagatattctattcgccat
GTTTTAagcgcacgtggaagaaaaagCCATAGACTTTTAGTAGACTAGTc
cgaatactttcttttactcgcagGATTGATgttaacttttcatcttcgtt
atttttaaaatgaagcacaaccgaagaaaaaaacgaaacttcagaaagtt
gcgtatttccagtgtgtagacgattctgacaattaacgaaattgatgatt
tttttcagtcagGCAAaggtctcgtattgggggttctagtcttgacccct
aaacctacgcgagattgaagcgtttgggtaaatgAGACGAAACtcgaaaa
aagctggtgttttgaagcgcttctgTGCAATCGAAATATCGCTCTTtgTG
ACACACTGTTTGTCAGATAgccccaagttagagcagtttaCAGTAATAAG
GGGGTCATCAAACCAGACTATCCCACTCAATACAATCAATAAATTTTCCA
GTCGATTACAAAGCAATAACCAATCAATGGATCTGATATCGATTGATTCT
GATACCGTAAGTTGGTGTAATGTAGACATCACTGTTCTAAATGACCCTGC
TGACCCACCGGACTTTATGAACACCAGACACTCAAAGTTCGGCGTTATGT
TGGATGAGGACTTTTTAACACCGGACAATCTCAACATCGGATTTTAGTCC
ggtgtatcattttttaatttaaggAAACTTTTTGTCCAGTGTCCAGCATC
CAGAAGTTCAAAAaatgaacaataaaaaaaaaaaaaaaacaccggAGCTA
ACACCCCAGACAAAAGGTTTCCGGTGTGGCTGTGGGATACTTTTTGGCAC
CGGACAAACACACCAAACTGTCAGTTGCGTTGGCAGGGTCGTATTCTGAC
AATGATCTTTAGAGAAGAGCTCGGATTTATTATATTATTGTTATTGGTCG
GAAACCCTGATAAGATTGAAGCTTTATTTCTTTGTGTGGTGGTCAGAGGG
GAAAATCAGAGATTCCAACTTTATTATTTTTCCTATCTCTGAAAATTTTC
TGAGtcttcaagaatattttcaaaattcttttgaaaaattcataattttt
aaaggCCATCTTCAAAACTTATTAGCAAGCCAAGACAAAATAATCttgta
aaaaatgacattttttaaaggtttcttACCAAGTGGTAACAGCCAATTGT
GCCAAAAAGAGAAGTAATACAGATATTGTGAACCGCTACAAAGATTTTAG
TTGctgattctttttttattctgtAGGAGGAAACCTTAAATTTTGGCAgt
gaaaactttaaaatcagATCAGTCAATCAAAGGTTTATgttaaaaaactg
aaattttgacctacccaaaattaaaaaaattcattaaaaacagtGAGCAA
AACGTTAACTCTCTCTCTGTTAATTAACAGTCTAATAGCCctaaaatgat
taaatttttcaattggAAACAGTGAAATGGCTGATTTTAGGTCCCTCGAA
GCTCAGAAAGGTGAAAATTTCCACTTAAAATTCCAGTttgatagctaaaa
acataaACATATCACCCAAAAATTAATAGAGCCTCTCAAAATGCCATGAT
TTCATACTTTGTAGCCATAAGTNtgatagctaaaaacataaACATATCAC
CCAAAAATTAATAGAGCCTCTCAAAATGCCATGATTTCATACTTTGTAGc
cataagttttttttttccgcCTTAGTTGGTTAGTCAAtggttttttgttt
gaaatatatCATTATCAAGCATGGATAACAATTCCAAAATGGCTGCTCCA
GACCCATCTTATACCCatataattttgatttccctaAAGTATTTCCAGAA
TATAACAGTATTaaattatatacttttttattgCCATTTAAGAGTTTCTG
CACAAAATACTTcattttagcaggaatttcaaaacCGGGATTctgtttcc
ataatggtggataaAGACACATCCATGACCctaatgattttgatttccct
gtaGTATTTCTAGAATACTATCACTACAAAAAGAAATTGGGTCAAGATTT
ATACTCATTTTGTAGAGCAGAGGtctttaaatgacatcatttttggctaa
agattatgttttctagctaaaaagtgatttttaagacacaattacaaatt
tttgagaaacgttgaaaactgaaaattcattttgaTAGAAGACCtcattg
aagacttccatctcttaaaatttcaaacatgTGAGTTTATCAGTTTAAAT
GTTATTGACTtacaaaattggctttaaaagCGTTTTGCTACCCAGATCTG
GCTTAAAACGGCTTATTTGGTTAACTATTGAATTATCACAACACATTATG
TACATCTTAGTGATTTTAAACATGAAggataaaatgaaataaaaacatta
gtAGGGTAGATTTTCTTGAGACGCTggttaaaatattaaattaCCCATGT
TTAAGGTTTCTATGATGATTCGTTTAGGGCCCAAACTGGTACATTTTTTA
ACCAAATGGGATTCCTTTTGTTGTTCCTTTATGAAATTTAGtacaacaaa
taaaaaaaataagatttacattcattttgaCATATCACAGGCTTGAGAAG
acctaaaaatgccatttttcccAGTTATTACCTGCAAATCAGTACACCCA
GGGGGTGCAGCCGATTCTTGACTTCTGACCTTATAAAAAAGTTGTGCAGA
AtgcctttttttttctttttataagcaacaaCGTTTATCAGCATCTAAGA
CCAGGATTCAGTGAAAAATAACCATATCATAAGCATATATCATTGAGCCT
TCATATCATTGGCCACGAGTTGTgaaatttcaagatatttcaAGATCTTT
TATCAAGTATTTAGAGTTTGAAAAGTGATCAATCTTTTTGGGAATAACAA
TCTTTTTAGTTAGAAATTGACGTTTCAGGgctattttcatctgatgtcaT
GCTTATTCatttaaaaagacaacaatttAAAGGCGTCGATTAATAAAATT
AGACCCACAAATGTTgctttttttggctttttctaacttttcaaaaaact
atcAAAGACATTTtacaaagaaagtttttgatttcgacatttttgctaaa
ttctttATTAcagatatttgttttttgtgtCCACATGCTTTGAGTAAACA
GAGCAAAAGCCTTTTTTAAgaaatataagaatataagaaaTGATAAGAAG
TTTAAAGGTAATTATGGTCAGAATAAATCGGTCTTTTtccactttttata
aaatagcaCAACGGccaaagaatatttttaaaatatttcttgtgtaCTGT
ATCTGATTTGCACTTCTTGTTTTTAAAGGGAATCTTATCTTATTCCAGTG
acttttttgccattttttcattttttagtcaagttaaaacaaaacaagaa
cAAGAATTTAGGATTACAGTATTTAAATGCCTCATATTATCTTCCAGgta
aaaaaagaacagaaacaaaaaagaatgaacactTTGAATATAATTGGTGT
TGTGATCCTTGTGTCAGTGTCTATTGGAACTGTTTACTTTTATATGTTCA
ACTCACGTGATTCCTATGGTAAGTCTTTTTCTGATGCTTAATTGTTCGta
cattcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg
ttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgtt
aagttatatcgccagaggtttTCATCTTCTTGCTTACTAGCTATATGGAA
AACTATGTGTTACAAAGGTTACTAAATTCTTATATTtcacttcttttttt
aattcatcaTTTTCAGACGTATCTTACTCTCCGGACTCGGGTGGTTCAGA
AGACCACATCCTTGAAAAAGCTCGAAAGATGATCATTCAAAGCATCCGAG
GGTCGAACATTACGTCACAACCAGTCATTGCCAACAAGAGAAATGATTTA
CTTTACAACAAACAGAACACCCCTTCtctacagaaaaaatcaattagAGA
TCGGCTAGGTATGATAGCTTATATACCACACTCTCTCCAACATGCGCACC
AGTTTCTAGTCTTGTTACATGGGTCATGGAAATACATTGTTGACCACCAA
AAGGAGTTATtcccaaataacaataatcttGATTCGTTAAATGACCTAGA
CCTTTTGGCTTTCTGTCATCCAAGTATTTGTAAAGAACTCGCCCATGTGT
GCACTGTTATTTCAAACTTACAAGAAATTACAGCCACGACTGTGCAGCGC
TGCTGGGCCGTCATTCAACCATTCGAAATTGACATTCCCTACGGGCCTCT
CAACTCGTTCATCATGTTTAATCGCACGGATATTGGCGAGTTGAAAACTC
GTTATAAGTACATACTGAGAACAGATAATGATGTCTTTGTAACGCCAGCC
ATGTTTAAACTGAAACCTAAAGTCTTTCTTCACGGCCACGGAGGATACAG
CGACCCATTCAATATGGCGCGGTTAAAACAAGTGGCGGCGCGGTTACACA
TGACGCACCGGGGGCGCCACGCTATTGGTTCAACCTGGTGCGGAGAAACG
GCTCAGTTTCTAAAACTTGCCAAAAGGACTTTGGAAGTGACCCGATATGT
CTGGTTGAACGAGTTTGATCCAAACGCGAAAGGACTGGAAACGattcctt
ttgataaaaaccGCGAGGGAGAGTGGATTCGATGGTGGAGACCTGTTTCT
ttactctacggtggagagatcACACTCAATCACATGATCACGGATATTTC
GGAGAAGAATCAAGGAAAATTCGATTCTTCGTCCTGCGATACTGTCAGTG
TGTGGACCACGCCACATATTCATTGCTGGCACAATGATTGTGAATTCCAG
AAATTCAAATTCTCTAAATATCTAAACATTGCTATATACGGGCGTGCCAG
TGAGACACTCCCTGGCACCATAGTGCATCGGattgttgaaaatatttatt
cacaAGACGTCAGTAAAATGAACTTGCAGCAGTACTCACAGTATATTGCT
TGGAATTCCGTCTCCAAATACCTTCGTAAACGATTCGTTTaactttttaa
acaaattttagattttagtgGTTTTAATCCTTAGAAAAACAcgagctttt
gaatttttttttaacgcATAATGTGTCAAAAGTAAATAAGgtcaaatggt
tgttttttaaACTGTACTGATCAATGGCTTTTCAAACCCTTTCAATTTAC
CTTTTCCTTCAAAGTTTTGCCTACTGACAAATTCTTACAACaagctacac
gtttttataagaacaaactaaagtAAGAACACGATGcgtcgatggtcaaa
atattaagaacaatttcagaacattttaaaactttaaaatacccaatttc
ttataaaattgcaCAAGCTGGTGTAAATTGAAAATAAGTAAAGGTTAAGA
ACATgatcttaaaactcaaaatttgagAACCTTCAAAAGATCTCAAAGAT
TTCTCATGagaatgttcttttaaaaagcgtgtataagtATCAGTTTGTTT
CTATTGAAGACAAACTTTCAATTGCAAGAAGTCATCAagttttaccaata
tttttccCTTATATAAGTCTAATtggtgaggttaagtaaatcggtatcac
gacgacggacgaaaataTCAGTCtggtgagtttcaaccaatcaaatttcg
tattttcactagcctgtTACATTTTCGTCCGCCTCGTGATTATCCCagta
tacttaacctcactattacTTCATCTTCGTGACGTTAACATTCAACAGAT
GTTTTTTATTACTCCTTTCAGaggtttttatcaaaaaattttccagcATA
TATTCGCATTTATCAACCTTTTTAACATATGTATTCTaagagagaaattt
ttaatatattttacaGATTTATATAGCtataattataattattatCATTA
ATATATTTACGGAGAAAATTATTTCCTGAAAAGTTCAAAGACAATTATTC
AACTTGAATATCAAACTGGAATAAAG Coding sequence (CDS) from alignment at scaffold_213:504596..520421+ >TCONS_00052246 ID=TCONS_00052246|Name=TCONS_00052246|organism=Clytia hemisphaerica|type=CDS|length=2640bp|location=Sequence derived from alignment at scaffold_213:504596..520421+ (Clytia hemisphaerica)
atgaacactTTGAATATAATTGGTGTTGTGATCCTTGTGTCAGTGTCTAT
TGGAACTGTTTACTTTTATATGTTCAACTCACGTGATTCCTATGACGTAT
CTTACTCTCCGGACTCGGGTGGTTCAGAAGACCACATCCTTGAAAAAGCT
CGAAAGATGATCATTCAAAGCATCCGAGGGTCGAACATTACGTCACAACC
AGTCATTGCCAACAAGAGAAATGATTTACTTTACAACAAACAGAACACCC
CTTCtctacagaaaaaatcaattagAGATCGGCTAGGTATGATAGCTTAT
ATACCACACTCTCTCCAACATGCGCACCAGTTTCTAGTCTTGTTACATGG
GTCATGGAAATACATTGTTGACCACCAAAAGGAGTTATtcccaaataaca
ataatcttGATTCGTTAAATGACCTAGACCTTTTGGCTTTCTGTCATCCA
AGTATTTGTAAAGAACTCGCCCATGTGTGCACTGTTATTTCAAACTTACA
AGAAATTACAGCCACGACTGTGCAGCGCTGCTGGGCCGTCATTCAACCAT
TCGAAATTGACATTCCCTACGGGCCTCTCAACTCGTTCATCATGTTTAAT
CGCACGGATATTGGCGAGTTGAAAACTCGTTATAAGTACATACTGAGAAC
AGATAATGATGTCTTTGTAACGCCAGCCATGTTTAAACTGAAACCTAAAG
TCTTTCTTCACGGCCACGGAGGATACAGCGACCCATTCAATATGGCGCGG
TTAAAACAAGTGGCGGCGCGGTTACACATGACGCACCGGGGGCGCCACGC
TATTGGTTCAACCTGGTGCGGAGAAACGGCTCAGTTTCTAAAACTTGCCA
AAAGGACTTTGGAAGTGACCCGATATGTCTGGTTGAACGAGTTTGATCCA
AACGCGAAAGGACTGGAAACGattccttttgataaaaaccGCGAGGGAGA
GTGGATTCGATGGTGGAGACCTGTTTCTttactctacggtggagagatcA
CACTCAATCACATGATCACGGATATTTCGGAGAAGAATCAAGGAAAATTC
GATTCTTCGTCCTGCGATACTGTCAGTGTGTGGACCACGCCACATATTCA
TTGCTGGCACAATGATTGTGAATTCCAGAAATTCAAATTCTCTAAATATC
TAAACATTGCTATATACGGGCGTGCCAGTGAGACACTCCCTGGCACCATA
GTGCATCGGattgttgaaaatatttattcacaAGACGTCAGTAAAATGAA
CTTGCAGCAGTACTCACAGTATATTGCTTGGAATTCCGTCTCCAAATACC
TTCGTAAACGATTCGTTTaaatgaacactTTGAATATAATTGGTGTTGTG
ATCCTTGTGTCAGTGTCTATTGGAACTGTTTACTTTTATATGTTCAACTC
ACGTGATTCCTATGACGTATCTTACTCTCCGGACTCGGGTGGTTCAGAAG
ACCACATCCTTGAAAAAGCTCGAAAGATGATCATTCAAAGCATCCGAGGG
TCGAACATTACGTCACAACCAGTCATTGCCAACAAGAGAAATGATTTACT
TTACAACAAACAGAACACCCCTTCtctacagaaaaaatcaattagAGATC
GGCTAGGTATGATAGCTTATATACCACACTCTCTCCAACATGCGCACCAG
TTTCTAGTCTTGTTACATGGGTCATGGAAATACATTGTTGACCACCAAAA
GGAGTTATtcccaaataacaataatcttGATTCGTTAAATGACCTAGACC
TTTTGGCTTTCTGTCATCCAAGTATTTGTAAAGAACTCGCCCATGTGTGC
ACTGTTATTTCAAACTTACAAGAAATTACAGCCACGACTGTGCAGCGCTG
CTGGGCCGTCATTCAACCATTCGAAATTGACATTCCCTACGGGCCTCTCA
ACTCGTTCATCATGTTTAATCGCACGGATATTGGCGAGTTGAAAACTCGT
TATAAGTACATACTGAGAACAGATAATGATGTCTTTGTAACGCCAGCCAT
GTTTAAACTGAAACCTAAAGTCTTTCTTCACGGCCACGGAGGATACAGCG
ACCCATTCAATATGGCGCGGTTAAAACAAGTGGCGGCGCGGTTACACATG
ACGCACCGGGGGCGCCACGCTATTGGTTCAACCTGGTGCGGAGAAACGGC
TCAGTTTCTAAAACTTGCCAAAAGGACTTTGGAAGTGACCCGATATGTCT
GGTTGAACGAGTTTGATCCAAACGCGAAAGGACTGGAAACGattcctttt
gataaaaaccGCGAGGGAGAGTGGATTCGATGGTGGAGACCTGTTTCTtt
actctacggtggagagatcACACTCAATCACATGATCACGGATATTTCGG
AGAAGAATCAAGGAAAATTCGATTCTTCGTCCTGCGATACTGTCAGTGTG
TGGACCACGCCACATATTCATTGCTGGCACAATGATTGTGAATTCCAGAA
ATTCAAATTCTCTAAATATCTAAACATTGCTATATACGGGCGTGCCAGTG
AGACACTCCCTGGCACCATAGTGCATCGGattgttgaaaatatttattca
caAGACGTCAGTAAAATGAACTTGCAGCAGTACTCACAGTATATTGCTTG
GAATTCCGTCTCCAAATACCTTCGTAAACGATTCGTTTaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052246-exon-scaffold_213-1491911889:504596..504675 | TCONS_00052246-exon-scaffold_213-1491911889:504596..504675 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1510915933:504596..504675 | TCONS_00052246-exon-scaffold_213-1510915933:504596..504675 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1575043694:504596..504675 | TCONS_00052246-exon-scaffold_213-1575043694:504596..504675 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1491911889:517893..518013 | TCONS_00052246-exon-scaffold_213-1491911889:517893..518013 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1510915933:517893..518013 | TCONS_00052246-exon-scaffold_213-1510915933:517893..518013 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1575043694:517893..518013 | TCONS_00052246-exon-scaffold_213-1575043694:517893..518013 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1491911889:518262..520421 | TCONS_00052246-exon-scaffold_213-1491911889:518262..520421 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1510915933:518262..520421 | TCONS_00052246-exon-scaffold_213-1510915933:518262..520421 | Clytia hemisphaerica | exon |
| TCONS_00052246-exon-scaffold_213-1575043694:518262..520421 | TCONS_00052246-exon-scaffold_213-1575043694:518262..520421 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_213 | supercontig | scaffold_213:504596..520421 + |
Blast
The following BLAST results are available for this feature:
|
