TCONS_00052280 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052280
Unique NameTCONS_00052280
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2241

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052280 ID=TCONS_00052280|Name=TCONS_00052280|organism=Clytia hemisphaerica|type=transcript|length=2241bp
tttaatttttcaggaacTAAAGAATAACTTTACAATGAAAAAATGAGTAC
AGTCAGGGCGGCCGCCAAGACTTTCGATCACAAACCATTGAATATTGGTC
CAAAACCTTATGGAGGTAGCaacaataataataaagctAAGCCAGTTAAA
AAGCCTAGCTTTCTTGCTGCGAATGAAAATTTACCTAAAGGAACTAAACC
AGTAATTTCTGCTAATGAACTATCAACTTTCAAacttaaaagctcaaaaa
cgCCCAATGGTGGACCAACGCCCAATGGAGTGTCTACAGATGATAAATCA
GAactaaaaaatgtaaatttaaaACCGCCCGTTCAAAGACAACAAGAGAA
AGATAAAACACGGGCGGTGAACAAAACACCGCCCACAGTGCCTAAAAAGC
CGCCCACGGATGATGAGTTAAAAGTGAAAGTCGTTGAAGACAAATCTGCA
GACcagattaaaaatgaaaaagaacgtGCTTCACTGCCTACTGGATCTGT
GCGGAACAGTAAattaaaactatttgaaaaattagcGGCAGGTGAGGACG
AACCGTTGCCTGTTCGGCGACGTAACACGAAAAGTGGTGGAAGTTTTGCT
TCAAACTCGTCTTCCGAACCAGGAAGTCCTCCCAAATTATCGACATTTAA
AAAACCACAACCGGGAAAAAAACCAGACTCTTTGCCGAGGAAATTGGATC
CACAGACTTTATCCATTCATCAGCCTATCCCAGGGCCCAAACCTCCAAAA
CCAATACCTGCTGTTCGACCACTGAACACTTCCAGTGAACCTGTCGTACC
AACAGAAACAGCATTAAAATCACCGGTATCACCGATAACAAAAGGACCAA
GCCCCGTAGCGGTACCAGCTCCAGTGGCACCATTCGGTGGAAAAGCGCCA
CAACCGCAACCCGTGGCTGATGCTGTGGAGGAAGAGCTTTATGATGATGT
ACAAGCTGTGGCTCCAGTTCAACAATCTTCAGGAGTTCAGATACCTAGTA
CTCAAACTGAATCAGTAACTGGTGAAGTCATTCAAGATGAAATTTATGAT
GACGTTCAAGATCACCCAGTGGCTCAACaagATGAATTATACGATGATGT
AGGTAGCTTTCCACCGCCCCCGCCACCATCGACCGTCACACAGACACCTG
CCCGTCCTGGTCAAGCTCCTACCCCTCCTGTACCTCTTAACAGGGGGCCA
GCTCCACCTGCCCCCATCACTACTGCTTCCAGAGTACCACCATCCATGTT
AAACCGTAATCCGCTGCCGGCACCGATCGGTCAGCTTCCTGCTCCCACCG
GTAGTGGTCCGGCTCCTGAGCAAGGGGAAGAGATATATGACGATGTAGGT
CAGGCACCAGTTGCAGAAGAAATCTACGATGACGTAGGAGGCAATGAACT
AGCGCAAACAGGGCGGCCGCCTATCCAACCACCCTCGACTCTACCAATAG
CAAAGATCGATCATGCACCaattaaaacagaaaaaacttttgggaAATTA
CCCCCGGAAAAGTTCCAGATCCCTTATAACTTGGAGTCCTGGTTAAAAGA
CATTCTAACAGCAAACAAGAATAATTTGAGAAACCTAGACAACAATAGCT
TGATATCACCAACAACTACCACACCAAATGCGATACCACTTCCACCAAGA
ACTATTGGAATTTCTTCGGCTGCCGTAGATGCATCAAACGCTGATGTTAG
TACCAACAATGACGATAAGAAGGataagaagaagaaagaaaaagagaaga
agaaacagGAAAAAGCTGAAGCGAAAGAACGACAACGACGAAATAAAGAA
CTCAGCACCTTCGGTCTGACACTTGATATCTTACAATCACGTCTCGGTGG
TATGTACATCTCATCGAAAGATTTTTCTGTCAAAACCAAACTGCACCTCT
CTTATAAAGCTGGCGATGAACTAACAATGGTTGAAGTAGCGAAACAGTTT
CGATTGAAAGGCAAGATGGTAGTGCAAAATAACCGCGATGGAAAAGTTGG
ATATGTATTAAAATCGGATTTCGGCATACCTGATGATGATCCTGAGGAGa
tCGAACCAGAGCCAGAACCTGTCACACTGACACCAACACCATCTATGAAC
GACGTAGCTACCAGTAACGTTAACATGATCGAAACTTTTGATGACGAGGG
TGACGATATATATGACGAATGTGGAACCGCCCTTCCACCTGTTGTTGCCG
CCCCGCCTGTACCAAACACACCCCGACCACAATTTGCAGGT
Run BLAST on NCBI

transcript from alignment at scaffold_213:1049699..1062573+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052280 ID=TCONS_00052280|Name=TCONS_00052280|organism=Clytia hemisphaerica|type=transcript|length=12875bp|location=Sequence derived from alignment at scaffold_213:1049699..1062573+ (Clytia hemisphaerica)
tttaatttttcaggaacTAAAGAATAACTTTACAATGAAAAAATGAGTAC
AGTCAGGGCGGCCGCCAAGACTTTCGATCACAAACCATTGAATATTGGTC
CAAAACCTTATGGAGGTAGCaacaataataataaagctAAGCCAGTTAAA
AAGCCTAGCTTTCTTGCTGCGAATGAAAATTTACCTAAAGGAACTAAACC
AGTAATTTCTGCTAATGAACTATCAACTTTCAAacttaaaagctcaaaaa
cgCCCAATGGTGGACCAACGCCCAATGGAGTGTCTACAGATGATAAATCA
GAactaaaaaatgtaaatttaaaACCGCCCGTTCAAAGACAACAAGAGAA
AGATAAAACACGGGCGGTGAACAAAACACCGCCCACAGTGCCTAAAAAGC
CGCCCACGGATGATGAGTTAAAAGTGAAAGTCGTTGAAGACAAATCTGCA
GACcagattaaaaatgaaaaagaacgtGCTTCACTGCCTACTGGATCTGT
GCGGAACAGTAAattaaaactatttgaaaaattagcGGCAGGTGAGGACG
AACCGTTGCCTGTTCGGCGACGTAACACGAAAAGTGGTGGAAGTTTTGCT
TCAAACTCGTCTTCCGAACCAGGAAGTCCTCCCAAATTATCGACATTTAA
AAAACCACAACCGGGAAAAAAACCAGACTCTTTGCCGAGGAAATTGGATC
CACAGACTTTATCCATTCATCAGGTATGCCTTTAACATTATATATAGTGT
GTCCGAAAGAAAAACGtaacaaattttgtttaaagTAAAACCACTAAAAC
CCTCATAATAGCTTAGTTTTACTAATAATACTGCTAGCTATAATATCACA
GTTCTTTCCGTCCCAGACGGTCTTCAGAAAAGTATAAAGACTTCTCAGCC
TtagaattttaaaaagaaattcagcaaaatattgaaaatcttgGTTTATT
TTTTGTGTTAATTCTATTTTCAAACTCAGAGTAAGAACTTGGCTTTGACT
TTGCTTTTTATTCACTGAAAATGAATTCATTTACTGTtgcaattgatttt
ttttaaaccagagatGTATAGTAACAAAAGTAACATTGTCAAATTCATaa
tatttatgacgtaatgtgtCTTATACGGAAACAACCAAGGTAGTACGGtt
ttttgtcactaattttgagattaagCAATAAAACTAGTTGTGAATACCCG
GGCTTTTTTTGGTACTCCcgtaaaacattacgtcatgaatatcaatgAAC
TGTATTTTGCGCCGCGCTTTTTTGTTGCTCTCCGCCGTTTGGTCTCGGTA
AGAAACAAACCCATTTTTGACCTGCGTTTCCTTCGAGGaagtttttttta
ggttttctgaagttcttttttcgaattttaGTCTTTTTGCAATTCATGAT
AATTAAACcagcctgaaaatatttttccaaacaaaGATCGATACCAAGCT
CTAACTCACTTTATCTTTACTCCTCGCCTGCAAAAACGTATTTGTTTACC
TTCCCTACGTTTTTATATACAATGGTTGAGCACGCCTTTTTTCGGGCCtc
ttctgagaactttgaaTTACGGAAAGCTATATTATAGAACGtaataaaat
tagatttttatcTTTATATAAAGCAGCCTATCCCAGGGCCCAAACCTCCA
AAACCAATACCTGCTGTTCGACCACTGAACACTTCCAGTGAACCTGTCGT
ACCAACAGAAACAGCATTAAAATCACCGGTATCACCGATAACAAAAGGAC
CAAGCCCCGTAGCGGTACCAGCTCCAGTGGCACCATTCGGTGGAAAAGCG
CCACAACCGCAACCCGTGGCTGATGCTGTGGAGGAAGAGCTTTATGATGA
TGTACAAGCTGTGGCTCCAGTTCAACAATCTTCAGGAGTTCAGATACCTA
GTACTCAAACTGAATCAGTAACTGGTGAAGTCATTCAAGATGAAATTTAT
GATGACGTTCAAGATCACCCAGTGGCTCAACaaggtacacatttttttat
tagtaaccaaagaaaagaaattttcacggaataaattttcgcggaattta
atttcgcggttttttaacaaatccgtgaaattaaattccgcgaaacaagA
ATATTCTCATGATTTATAGAATCACCTATAGAATTGGtgtttttagggca
aaataagccatactttaaacaaaaattcctcccaaccgcgaaatttttaA
TGCCGCGAAAATTTCtctccgcgaaaatttcttcccttaaggtagcaaTC
AAAGAAATTCAAGGCTAGAATTTATAATGTTCCTTAAAAACTCtttaccc
agctgacacacaacgttgttcaacgttcatctaatgttatatggacgttg
tgaacattagatggacgttgaaacaacgttgtgtgccagctgtgTAAATA
AATCATTTAAACTTCTTCGAAACATGAATATGGTTGTTCTGAGTAAGAAA
ATTGCTGTTGAAATCGAGGGTTCTGGTGTTGATAAGCAActtattttggt
cattttgtGGGCTGAACCCTTAGCAACTCTGCTGATGCtataaaaaaatt
ggaaccaCATAATGGTACAAAGTAATTCCCTTTAAGTCTGAGGGAGAAAG
TTTAACTTtaagagaaacattttttgacGGCAAGAGATTTAGGTGGGCTG
GGCGACTCGCCGATTCTGTAgtactaattcagacatattagaaataaagc
aaaaagtaatggatggaacaaattttagtcgtctagaaacctttgtgcac
taactccaagtGTCAATAttacaattataatttttcccgctcaaaaaata
ttcttgaaaaagaaatgtgtgtggatttgtgtgataaaatcttttcattt
gagttgattttgtttcgagagttttttgttgcttgataaattgttttctc
gctacgcaaatttctgcgtagctagccggggattctataaggccaatcgt
ttatacaaactaaattccGTAGCAATAATCGTACTATCATATGACGCCTA
TACTATtgtattaaagtctgtccagatataattggcagtggaaacaagaa
tgcctgtaacttttgatagtcaaatataattatggaaattttttttgctt
gttttagagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctaaaacaag
caaaaaaaatttccataattatatttgactatcaaaagttgcaggcattc
ttgtttccactgccaattatatctggacagactttaaatgTATTATAAAG
ACTCCAGTTTACCAATTCCGCTGCAAAGATTTTTTATGGAACTGGTAAAT
Attggggatgagctggagtttttacaagatacttcactaattggtcattt
aaagtgatagagatgacgcgttctttagaaaaagtaatgagatNGCAAAG
ATCGATCATGCACCaattaaaacagaaaaaacttttgggaAATTACCCCC
GGAAAAGTTCCAGGTAGGAAATACATCTCATTTGGAAAAACAAAATCGAA
TAAGGGAACTTATCGAATAAAAGAGTGTCGTTTAAGGGAATTTCTTGTTG
ATGGTGACTTTCAATAATATCGAATAATNacaaccaaatcaaaaaagagc
ttgtaaaactccagcttgtccctccCAAATATTGAGCACTCTTTTTGAGA
TTTGAACATATAGCCATATGAATGTAAAACTGGCTTGTTATCATTTTTCA
GATGAATTATACGATGATGTAGGTAGCTTTCCACCGCCCCCGCCACCATC
GACCGTCACACAGACACCTGCCCGTCCTGGTCAAGCTCCTACCCCTCCTG
TACCTCTTAACAGGGGGCCAGCTCCACCTGCCCCCATCACTACTGCTTCC
AGAGTACCACCATCCATGTTAAACCGTAATCCGCTGCCGGCACCGATCGG
TCAGCTTCCTGCTCCCACCGGTAGTGGTCCGGCTCCTGAGCAAGGGGAAG
AGATATATGACGATGTAGGTCAGGTAAGTGATAATTCAAGTATGTTCTTT
CCAAACTTCTCCCTAGTCCCTTAGTTCGTTTTTTAATGATTCTGATGACG
CTtatctgaatcgcagacctctatataTATATGTTTGCGATAAAGAAATT
CTTGTCGCTTGACGATGAGCAGAAGATACCTTTTAATCACAGGCTAAGCT
TTAATGTCATGAGAAAGAATGATAAAAAGccaaatatgtttttttttgtc
aaaaccaTAAAACATTTGAAACTGATGGCATAGAGTCTCTTTTAatgaat
tacacgtttttttataagaacatccaaaattttttaagccttcggatgtt
cttaactttttcagatttaagtctaaaaatgttcttaataagttcttatt
ttcgccattttgtgagtaattttgTGCGTTTtactaagaaatcgggtgtt
ttagagtccacaacgccttaaaatgctcttaatttgttcttaacattttt
gctatcgaagccttgttcttacatagtttgtttttataaagaaacatgTA
TCTAGTCAGCAATaaatttcatatatttttttttcattacagGCACCAGT
TGCAGAAGAAATCTACGATGACGTAGGAGGCAATGAACTAGCGCAAACAG
GGCGGCCGCCTATCCAACCACCCTCGACTCTACCAATAGCAAAGATCGAT
CATGCACCaattaaaacagaaaaaacttttgggaAATTACCCCCGGAAAA
GTTCCAGGTAGGAAATACATCTCATTTGGAAAAACAAAATCGAATAAGGG
AACTTATCGAATAAAAGAGTGTCGTTTAAGGGAATTTCTTGTTGATGGTG
ACTTTCAATaatatcgaataatggagcgcaTCGAATAgcagaacgtcgaa
ttagagagcctCAACTCTACCATTTAGACGTTATTCTTGTCTTTATTGCG
CTCTCTCTCAGCACTTGTCTAAAGACTCCAATCAAAGATAGCGTATATAG
ATTTGTTTGGGTTTTTAAATACAAAATGTCAGTATTTGGAGCTGACACCT
AATCTCAATATGCTTTCTTAGAGAATGTTTTGACCGCTTTTTAGATCCCT
TATAACTTGGAGTCCTGGTTAAAAGACATTCTAACAGCAAACAAGAATAA
TTTGAGAAACCTAGACAACAATAGCTTGATATCACCAACAACTACCACAC
CAAATGCGATACCACTTCCACCAAGAACTATTGGAATTTCTTCGGCTGCC
GTAGATGCATCAAACGCTGATGTTAGGTATGATTTTTCTTGTATACTAAA
AGGGGTTGAGGGCACTTAGATTAAAGGCTCTGAACATaccaaatttttcg
attttacaccaacttaaatggcaatttctgcattttaaaaagattaatgt
ataactttataactttatatgtcctgttaaacctaccttttaagaattta
aaaatcgaaaaattgaaatgaaaaaattaaatgaagaagaaaacgaagag
tttttcgaagaagagtatttcacctttcaaagccctaatctcggtaaaaa
tcaaacattttgaattctttttggtTCAtttctatttagtatctaaaaat
acaatttcgaaaaatttttgtggaagtatctttcctttaaaatctccaaa
aacctaatttttggcaattttcttcaccaaatttccatacgaaaacagct
attttccgaaaaaatctaaataaagaaattatttgtcattaacttagaaa
aagtttgaaacaataaaatgatttccccgaggtgattaggctttttttgt
gaaaagaatatgaatagcgtcgttatgacgtttaaTTAAGGTCCCTCCaa
gtaattacttaaattcactttttcaaaggcagtttgttcttaaacatgtc
aaagaagcgaaaacataaggttttatcttcaaattctaaaattgattttt
cactttgaccagagcccttaaggtgCAATTTGTCTCATGACCGGAGCCCT
CAAACGATTTACAAGCCGAAACATTCAAAATATAAAGCGGAAAACAAGCT
CCGAAAAAGTGAATCTTTTAAGATCATTCAAATTAAAATGATGTGATCAT
TTTTATGTACCTGATAATGTATGAACACCGAAAAGTTTCgaaagaaatga
aattgaatttttaaatttttgttttaatccaATATGACATGGCACACTTT
GACATAAGGTCATTTTTTCTTGTATGGCTTAAATCTTAAGTTAAAGATGA
TGcatatttttggaatttgttttcTGCTTTATATTTGGATTAAATGGGTA
CCAGTTATGTTATAATGTGTAAGGttttactttactttactttatgggca
gaaagtttcgcgatgCGAATTATGGTttttagccgaaatttcacagatag
aactttcgcgaattcatataaaatttacctttttttgttacaaaaactca
taaaacacgcaaaaatttagcaaacagtgcaaaactgagtaggaaaattt
atttttcgcgaaaaaaaaactttcgcgtttttcaggtttaatttcttacc
tggcagaaactttcgtggAAAAGGATTAAaatcgcgaaaaacgcgaaagt
ttctgcccttaaagtactCAGTCCCGGGGTAGTccgaatcgcagacctct
acaaaaccgcaggtagtataaGTAGTAAGAAACCGTTAGTGGGAGCCAGT
AGCCTAGTCCCGGGAGTACTAGGGTTGCTGACGGGTATTTGCCGCCTGAC
TTTTAACTTTTGGACCCTTTGCGGTACTAAAAAGgtggaaaaaaggaaat
tttcacTATCCCTTATTGGGACTCATTTTACCCAAATTCGTTCtgaggtt
ttaatttttttagattttttcaaccCTTACAGGGACTACCAGGttccaaa
aaggcaccctaaAGGGCGACACAAACCTGTACAATTCCAGTAAAAATGCA
GAATTTTAAATCTTTGCTAAGGGTAAATAAGATAGAGACGCGTCCCCGTG
AAAGCTTGGGTAGTCTGAAAACTCTTCATAAActcgaaaatgaaaaaaag
agcaGCGAGCAAAAGGTGGGTGGGTGGCCTTTCTACCTAAATATGAGGcc
ctttttagagattttttgttttgggaACCCCTCACTTTATTAAGGTTGAT
GCAGTGGTTCAATCACTGNttttaatttttttagattttttcaaccCTTA
CAGGGACTACCAGGTTCGAAAAAGGCACCCTAAAGGGCGACACAAACCTG
TACAATTCCAGTAAAAATGCAGAATTTTAAATCTTTGCTAAGGGTAAATA
AGATAGAGACGCGTCCCCGTGAAAGCTTGGGTAGTCTGAAAACTCTTCAT
AAActcgaaaatgaaaaaaagagcaGCGAGCAAAAGGTGGGTGGGTGGCC
TTTCTACCTAAATATGAGGccctttttagagattttttgttttgggaACC
CCTCACTTTATTAAGGTTAATGCAGTGGTTCAATCACTGTGCCAGCTTGA
AAGCGGTCTAGGTTGGAAATTCCGAGTTACGGAGATTGGTTTATAAGCCA
TTGTTAGCTGAAGGAACCAGAAAAGTAGTTCGAGTTAAGAGtctcgagtt
atgaagactctGCTGTACCGTGTGTTACCTCACACTCAAATATCTAACTT
TATGGATACTGGCTTACAAGGGTTTGTTAACTAAAGAGACCAGTAAACTT
TCccgctcgaccaatcaaatcacagacacgtgaccataatattttgattt
gcgtaGTATTGGAGTATGCCTTTAAAAACTAGTGAAAGATtagcactgca
acgacttcttctaAAAGCGCTAATTTTACGAAAGGAGCAATGCGAGGATT
TAGCGCCGAAAGTGGAGCGATCTGAGGGAACACGAGAATTGGTGGTGTCA
TGTAGTCATGCACGAACCACTAAaaaacactgaattttcaaaaatgttaa
gCCATATAGTGACCAATTTAGTAGACCGCGCGCACATTTCAACAAGCAAG
ATTATACTTCGTGGCATTGTAATAATAtcgaaattggcccgctcccttta
gagctttaacgtgggcggccgccaatccgccatcggaatatcagataagg
cATTGTAATAATATCGACGATTTCTTTCGCATAGTACCAACAATGACGAT
AAGAAGGataagaagaagaaagaaaaagagaagaagaaacagGAAAAAGC
TGAAGCGAAAGAACGACAACGACGAAATAAAGAACTCAGCACCTTCGGTG
TAAGTGAGCTAGATTTCGGGCAACATTGATTAACCTTGATTAACGAGCAA
ACTAGATTAACGAGCAAACTAGACGAGGAAACTTAAGGCAATTTAACCCT
ATAGCACCTTTGTATCTTCCACAGTAGACACCCCTTATGTATTTAATTAA
CCAAAAACTTCCTCCATAGTTCAATGAATCAatcgtgtgaaaatgataat
tatactaGATGAAATTTATTGGTAATTTCCTGGTAAGGGTTGTAAAAATG
GTAGAGTCATTCCTATTGTAATCCCCAGTTGGCACCCCTATGTATTTAGT
TAACCAGAATTTTTCTCCATAAGCGAAGTCACCAGGTATACAGGGTTAGG
ATACGCTAAGGAAAACTATAAGGTCGTGGTCGTGATGTTGTATGTACAAG
TACATTTGACGCTCTCTGAATCGGGGAATGTGATTTTCATCAATTAAGGC
agcatatcgaatagtagagtttcttttatgagagtttcttgtggACGGTA
ACTTTCAAtaattatcgaataatagagcgtatcgaatagtaaacgtcgaa
ttacagaGCGTCGACTActactttttacaaaaacaatATTATCCCATAAC
AGTTATTGTATCTTCATAGTTTAACAACTAAGTTACTGTCTATTCGTATT
ATACATACGACTCCAGGTTAGATTTAGAgcagagaaaaaatatttcaaga
actcgaaaaacaaaataattctaCTACATGTGACCGGTTAAAAATGGTAC
TGCTTAGTCGCATATAGCCTATACTAGatgtcacccgcgttttttctact
caatatctattccactttgcgactttttcgaatgttttgagcccacgTTT
TCGGGCTCagaacattcgattttttgacgtcacttttaacttttaaaGCT
CATGCAGTagcgaaaaaatcgaatttgcgtcaaagcacttgaaaggatTC
TATTTTTCCGAAATCTTCAAAGTGGAACTAACTAAGAAATGGAATGAAat
atcccggtttttggtgaggtactcGCTAAGCCACATACTACTTATTCGAG
ATTCAACTGTCATGAGTTTCGCGATTCTGAGAAACAAATTGTCATTTGAA
GAACTTTCACTTTAAAAAAACCACTTTCAGATTTTCTCAACTTGACTTAA
CTtaacttttttgacattttctgtTCGGAAATGGCTATTATatcttcagt
ttttttatcTTGTAAAATTATCTCTATAATAGATGTCACTTCACTTCGta
tccatagatttataaagcccgaagggctagatggcgtactcttgctgaaa
agtgtgcaacaatattttttccgatattcattttttttgcctgcgatggc
tcaAAGCATgacatctagcctttcgggctttataTCTATGTTCATATCTC
GGTCAcactctcaaaaaaaatttatctccCAAGTGTAATCAACTCCATTT
CTTATCTCTATAATAGCTATCACTCGATATCTTGGTCACTCGGCATTTTT
ATCTCCCAAGTGTAATTGACACCATTTCTTATCTCTACCATAGCTGACAC
TTGATATCTTACAATCACGTCTCGGTGGTATGTACATCTCATCGAAAGAT
TTTTCTGTCAAAACCAAACTGCACCTCTCTTATAAAGCTGGCGATGAACT
AACAATGGTTGAAGTAGCGAAACAGTTTCGATTGAAAGGCAAGATGGTAG
TGCAAAATAACCGCGATGGAAAAGGTACATATATTCGTGCTACGCTCAGA
CCAGAATAATTTTATATTCATCTATTAACATAGGTCATTTTacggtcgaa
atggatcatgggtaatcaggactgattgcgccccgATAACGGTTTCCCGT
TGACTAGAcgcaaaattcttcaaaaaatttcaaaaatttggaccaatTGT
CAGTCGTCATTAGCgtgcagtggtcctgattacccattacgctttgcgac
tgtgaaatggcctattagGGCCCGGTTAGTTTTTTAGGGGACTTGTAATG
AATTTACTGGATTTACACGGGAAATTTCTTCTCGGTGCGTGGCATTTTTT
ACCCTTAACATCGACGAAGTCTTGCTACCGTTTGTTACGGTTGGATGAAT
TTTGTGCCTAGACTAGTGAGGGGAATTGAACGAGTCTCAAggtgattggc
ttaggtttacCCTTAAGGGTAAAGTATTTCTTTCAAGAttctgaaagttt
gaaaaatgtatATTATAACAATgagaaaaaggaaattttaggGGCAAAAT
TTTGGAAAGGGAGATTCGAGTGGTattgatatattttttgttctttcttt
tacAGTTGGATATGTATTAAAATCGGATTTCGGCATACCTGATGATGATC
CTGAGGAGGTTAGGAACTAGTTCTTAGACTGTTTTAAAAGTCTAGCCACG
TAGCCACCAACGTAGCCAAATTATCCaagatcttattttttcaataaatt
tcccAAACCGAATATGTATTTGATGATTTTGGGCGGGAACTcagattttt
acattttacatccCTCCCCCCCTGCTTCcctccaaaacaaaagaaaatct
gatttttcgttctttttctccgaattataaaatttcattttagtgCATTT
TCCGGCCATATTTCTTAACTTAAATCGACTCAAACTTCAGCTCCCCTCCC
GACCAATATCAAAAtacttcctacggcactgcaaACTatgttattcttat
tttttcagatCGAACCAGAGCCAGAACCTGTCACACTGACACCAACACCA
TCTATGAACGACGTAGCTACCAGGTATGATTATTCAACCCAAaaatcgtc
gcatcaaaattaaaaaagctttaagtccatttttgttgttttgagaaaat
cgactttgaatcatttttttttaaatcctgaaaaacctttaacatttgaa
atatttttgtgttaaaaaagccaaaatcgTTTCCACGCTGGCTTTTTTGG
CCTAATCTGATGcgacttaaggcttttttaaccgtaaaaacaaagtgaaa
agtaaattcttatttttctaaaaatttaaaatcaggcCACTTTAAgctct
ctaattcaatttcCAATAAGAGAGCGCATCGAATTGTAGAGCGTCGTTTA
GCAGAATTTCTTATTGACGGTGGCTTTCAATACTATGTTATTATGGAATA
ATGGACCATATCAAATAGTAgaaagtcgaattagagagcgtcaactgtat
aagCAAACAATAGAAGATTCCGCAGTgaactttctttaaattgaaccact
ctgtaattcgaacttccTATTTGAGTTCAAATTAGCGAGAGTTAGCTTTA
CgtacccaggacattcttattccaacccccccccgcttgttttGAGATTT
CTACCAAcccccagctattaggtacccgagagtagacgatgctatcgtcc
atATACTATAATATATTATCaagatataacatagtttgtatacttTAAAA
CGTAATATATTGCGCGGCGGaaaatagagtctgtgtttacgtTTTTAAGA
CAACAGCTACCCCCGAAAAGActtcccgtcttcacgtttgttcctcttag
atgaaactcgtcttagactatagcatagtctacccGAGATTATTAACGAA
AAGTCTGATTCGTGAACTATGTGTCCATCTTTTTGTGTCTTATTTCAGTA
ACGTTAACATGATCGAAACTTTTGATGACGAGGGTGACGATATATATGAC
GAATGTGGAACCGCCCTTCCACCTGTTGTTGCCGCCCCGCCTGTACCAAA
CACACCCCGACCACAATTTGCAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033077XLOC_033077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052280-exon-scaffold_213-1491911889:1049699..1050421TCONS_00052280-exon-scaffold_213-1491911889:1049699..1050421Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1049699..1050421TCONS_00052280-exon-scaffold_213-1510915933:1049699..1050421Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1049699..1050421TCONS_00052280-exon-scaffold_213-1575043694:1049699..1050421Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1051325..1051682TCONS_00052280-exon-scaffold_213-1491911889:1051325..1051682Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1051325..1051682TCONS_00052280-exon-scaffold_213-1510915933:1051325..1051682Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1051325..1051682TCONS_00052280-exon-scaffold_213-1575043694:1051325..1051682Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1054300..1054571TCONS_00052280-exon-scaffold_213-1491911889:1054300..1054571Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1054300..1054571TCONS_00052280-exon-scaffold_213-1510915933:1054300..1054571Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1054300..1054571TCONS_00052280-exon-scaffold_213-1575043694:1054300..1054571Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1055141..1055305TCONS_00052280-exon-scaffold_213-1491911889:1055141..1055305Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1055141..1055305TCONS_00052280-exon-scaffold_213-1510915933:1055141..1055305Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1055141..1055305TCONS_00052280-exon-scaffold_213-1575043694:1055141..1055305Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1055643..1055824TCONS_00052280-exon-scaffold_213-1491911889:1055643..1055824Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1055643..1055824TCONS_00052280-exon-scaffold_213-1510915933:1055643..1055824Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1055643..1055824TCONS_00052280-exon-scaffold_213-1575043694:1055643..1055824Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1058683..1058797TCONS_00052280-exon-scaffold_213-1491911889:1058683..1058797Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1058683..1058797TCONS_00052280-exon-scaffold_213-1510915933:1058683..1058797Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1058683..1058797TCONS_00052280-exon-scaffold_213-1575043694:1058683..1058797Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1060342..1060522TCONS_00052280-exon-scaffold_213-1491911889:1060342..1060522Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1060342..1060522TCONS_00052280-exon-scaffold_213-1510915933:1060342..1060522Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1060342..1060522TCONS_00052280-exon-scaffold_213-1575043694:1060342..1060522Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1061104..1061156TCONS_00052280-exon-scaffold_213-1491911889:1061104..1061156Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1061104..1061156TCONS_00052280-exon-scaffold_213-1510915933:1061104..1061156Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1061104..1061156TCONS_00052280-exon-scaffold_213-1575043694:1061104..1061156Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1061507..1061571TCONS_00052280-exon-scaffold_213-1491911889:1061507..1061571Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1061507..1061571TCONS_00052280-exon-scaffold_213-1510915933:1061507..1061571Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1061507..1061571TCONS_00052280-exon-scaffold_213-1575043694:1061507..1061571Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1491911889:1062447..1062573TCONS_00052280-exon-scaffold_213-1491911889:1062447..1062573Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1510915933:1062447..1062573TCONS_00052280-exon-scaffold_213-1510915933:1062447..1062573Clytia hemisphaericaexon
TCONS_00052280-exon-scaffold_213-1575043694:1062447..1062573TCONS_00052280-exon-scaffold_213-1575043694:1062447..1062573Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:1049699..1062573 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0517772	0.112285	0	14.6258	11.9963	9.51038	9.10934	6.89668	9.43539	9.49965	3.17854	17.4988	21.0721	13.6311	15.8702	11.8648	10.5671	18.3261	25.8178	4.13405	3.28214	2.65915	4.15056	22.4656	18.2936	6.52375	6.57791	7.595	5.94271
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052280 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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