TCONS_00052361 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052361
Unique NameTCONS_00052361
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2561

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052361 ID=TCONS_00052361|Name=TCONS_00052361|organism=Clytia hemisphaerica|type=transcript|length=2561bp
TTCAGGTaaacataaaaatgtaaaaaatcatGCTAAAAACATTCTTACAG
TTATACGGTACATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCAC
GGCCATGGCTGCACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATC
CATCACAACTCTACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCA
AATCATGATGTTTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGA
CACCCTTCAACGAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATA
TTCTTGGCTTGGAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTC
CAAGGATTCAAGGAAGGTGATCGTGTAATGGCTTTATTAGCAGGAATGGA
TTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCATATCAAC
TCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTTGGTGCAC
GCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTAAAGGATT
ACCAGGAACTCAAGTCATTGCTACAGCAGGTAGTGCAGCAAAACTGGAGA
AAGCGAAATCGTTGGGAGCAGATGTCTTAGTGAATTACAAAGAAGAGAAA
TTCTCTGAAAGAGTCATGGATGCAACAAACAAGCAAGGTGTTGACATCAT
TCTTGACCCTGTTGGAGGTTCAAACGTTGATCAGAACCTTGCCAGCATTG
CTATGGATGGTCGTTGGGTTTTGTATGGACTGATGGGTGGTCCTAAAGCA
TCGAATGACAAATTTCTTGCTCTGATGCTCCGCAAACGTGTCCAGTTACT
TAGTTCTACTTTAAGAGCGAGGTCGCTCGATTACAAAAAAGATTTGGTGG
ACTCATTTGAAAATCATGCATTGGAAAAATTCGTTTCTGGTGAATATAAG
CCCATCATCGACAGTATCACGACACTCGATGGAGTTGCCGATGCCCATAG
AAGAATGGATGCCAACCTCAATAGCGGTAAAATCATCATGAAAGTGTCAG
ATAGTCTCCTAGCAAAGGATGAGCTTTAGTCAATACATTTGTTGCAATTT
ATTTAGGGTTTTTTTAACAACAGTTTTATAATCAGTTATAATTATTCTTT
ATTGATAATTTTACTAGAGAATTCgtgaaattcttttattttacaatcct
aggtatttatttaaaaaatatttttgactatttttgaagTACGACTACTA
CCATAGTTAAACTGCCTTTGTCCTCTAGTAACCAGCTGTTATCGCCAGTT
AAAAATAGCCGAAACTCAGGTCCGTAATTTCCATTCGTTgttcacatgac
taaaggttaaatctcaaaattagtacctcacaaaatttaaagttttactg
tggtggtcatctttgagattgagattgccctttttcatgtagaggaatag
tcaatcgttttcatatgacaaaaaggccaatctcaaaagcagaaaaaaat
tgcaagatttccaattttccaagacactgattttgagattgaacctttag
tcatgtggaCGACGGTATCATTTCCATAAAACCCATTCTGGTTATCCGAA
AGTCTTGGCAGCCTCGTTTCGTCTTCTGAAGTTTTCATCATTCTTGAAAG
TCCACGCAAGTCCTTTGTCCGTGATGAAAATATCCCATGGTTTTCTTATC
TATATTTTAATTTCTCTCCTGGTTCTTTGCTCTCCATTATAATACGTTCA
AGATGACTTGTACCTGATCCAAAAGTGCAATCTTTGATTTTAATAAGAAG
CAAACCAACTATACCGAACAAAAAGATTGCAGGGAAAGCAACAATGAtga
ttttgataaatcttttgTCATTAGCACTGAACAGTTGCACTGGCTTTTTC
TCTAGCATTCCACTGTCGATAAGTTCTTTGTTCTAAGGAAGCAAAAGAAa
ccttttttattagaattttggATTATATTCGGCTTGTTCTCATTTTTGAA
GGCTCTGTCGAAGGATATGTAACTTAAATTAAAGGCGATAACTTTTTTTT
CGCTGAaaataaagttttcaaaatcttctttttcacaaaagtcttcattc
ttcttcaattttcttttcatacGTTCTAGTTTTTCAGctcaattaaaaat
gaagaaataaataagtttttgagaaaaaaaggaagcATAAGCAAAATCAG
AAATTTCGATCCCGAACTCACAATTTCAATATTTGGAGCATCCATGTAAG
CCTCCAAGAAAGCCTTATTCATCATAATCAAAGTTTCATTGATGGCTGTA
AACCCAATCGATTGGGAATCAAATTTATGCTCGATACCAACTTTGACGTC
ATTTCCTAACCGACTGATATCATCTGCTTTGATTTTATACGTCATATCAT
CAATCGCAAAAGCTGAAATACATTAATCgGCTCTCATCATATCTTCAAAC
GAGGCGTATCCTTAAATCAAAAGAGATGAAAGAATAGATCGTTAATCAAC
AAGGATGACAGATGTCTTCTCGGAGGTATTCCACGATGCAATTTGACTGC
TCTCATGGTGT
Run BLAST on NCBI

protein sequence of TCONS_00052361-protein

>TCONS_00052361-protein ID=TCONS_00052361-protein|Name=TCONS_00052361-protein|organism=Clytia hemisphaerica|type=polypeptide|length=349bp
MLKTFLQLYGTLVVRNLAYSTSTTAMAAHMRAVRIKSFGDPSQLYIEDQE
PIPQLASNHDVLLHVAATALNRADTLQRKGGYNPPKGASDILGLEASGVI
EKIGSNVQGFKEGDRVMALLAGMDYISAAAIPEVWLTAYQLLHKVSAIQP
NERVLVHAAGSGVGTAAIQLIKGLPGTQVIATAGSAAKLEKAKSLGADVL
VNYKEEKFSERVMDATNKQGVDIILDPVGGSNVDQNLASIAMDGRWVLYG
LMGGPKASNDKFLALMLRKRVQLLSSTLRARSLDYKKDLVDSFENHALEK
FVSGEYKPIIDSITTLDGVADAHRRMDANLNSGKIIMKVSDSLLAKDEL
Run BLAST on NCBI

transcript from alignment at scaffold_213:696029..704764-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052361 ID=TCONS_00052361|Name=TCONS_00052361|organism=Clytia hemisphaerica|type=transcript|length=8736bp|location=Sequence derived from alignment at scaffold_213:696029..704764- (Clytia hemisphaerica)
TTCAGGTAAACATAAAAATGTAAAAAATCATGCTAAAAACATTCTTACAG TTATACGGTACATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCAC GGCCATGGCTGCACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATC CATCACAACTCTACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCA AATCATGATGTTTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGA CACCCTTCAACGAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATA TTCTTGGCTTGGAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTC CAAGGATTCAAGTGAGAATAAATAAACATTGCCCTCGTTCATAAACACGT AGTTTTAAGATATGTACAGCGAAGTCTCCGTAATTCGAGCCTCTATAACT CGAATGAGACTCTTTAACTCGAAAATGTTTTTTGTCCCTTTTGGTAACAA TGCCTTATAAACCAATATCCATAACTCGAAATTTCTTTAAATGCTTTCTA CGGGAATAAAGGGAGCTTGTTTTAGGCAGTGTCTTCATGCTGAGTCAGAT AAAGTAAAGCTACTTTTTTACGCAACAATATCCTGCAAACAAGTGAAAGA TCGAAAGTTGTTTCGAGATGTGACCTCACATTCTATTATTTTTGTAAACA AAAAAATAGCAAAGTTGATTTCGAGCAAATTTACAATCGAATATTTTGAT CATAAGATGGAAAACGTTCTACTTGTTATAAACATAAAAAACATTCGAAA GAGTATCAGTAAAGGTCCCTTTATTTGAGGAATGTTTTTTTGCTCAATGT ATTTTCATTTTTTTAAACCTTTTTCTAATCTTGTCGCACTTGTTTTTACT ACATCAGCATCATCAGACCTTTCATTCTTAAAACAAAACCTTAAAACTCT TGGACAATTCTCAGAAGAAATAGTTTTTCCTTATCATCTTCTGATTTCTC TTTTGTAGGGAAGGTGATCGTGTAATGGCTTTATTAGCAGGTATTTTCGC CCATAAAATAGCCCTTTTTATACTTTTAAAAATGTCGTTTCCAAATTTTT TGTGCTGTGATCTTTGTGACATATCTGTAAAGGTTTATGCATTTGCTTAT GTCTCTCAGTTTGTCTGTATTCGTTTATTTTCTTCTACTAGAACATAGAA GTCCATTTTATTCAATCTTTTACGTCTACTGGTAGCAAATGCATAAACCT TTAAAATATTTATTTACTAACCTTTTTTCACGATCTGGTGGTGGCTATGC CGAATATGTATCCGTACCCTATCAACAACTCATCCATATTCCCAAAGGAA TGGATTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCATAT CAACTCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTTGGT GCACGCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTAAAG GATTACCAGGAACTCAAGTCATTGCTACAGCAGGTAGCGATAAACTTCGC ATTTCGTTTCTGTCAACAGCTAATTTCTTTAGATTAAGGATTATTATTTT TAAGTAGGAAAATATTGATTTACCTTATTGGAACTAATTTTCATGGGAAT TTATTTCAGCGTTTTCTGAACCCGCGAAATATATTTTTTTTCCAAATTTA TCGAGAAATTTGAAAAATCTCTAAAAAAATTTATGAAATTTGTCCAAAAA AGTACAAAACCGCGAAAATTAAAACCCGTGAAATGCAATATTTCCGATTT TTTTTTTTCGACCGCGAATAAGTTTCCGCGAAAATTAGTTCCAATAAGGT AATTACTTTCAATAACTTATCGCAATTACGTGACCGGGTAGCTACCGACT GTAGAGCATTTACCTAGTAATCCAAGGCTTGTGAATTCGATCCCCGGCTA ACGCCAACTCAGCGAATGAGTACGAAGCTTAAGATTATGTAAGTAACTGG GAGCTTATAGTAGGTGTGTCACATCTCAGTATTCATTCGATCATTCAGGT ATAGCGCGAATAGAAAAGTGCTATTTTCTCTCACTCCTGGCTCCTAAGAC AGCCATCAGATGAATATACTTACCTCGATGAAGATGTACAAATTTACTTC CAGCCTGCTTCTCCGTCTCAAAATTCAGCAAAATAATGAACATTTCAAAA AGCCTTGCTTCGACCACTGTTACTTTACCCAGCTGTCACATAACGTTGTT TTAACGTTCAAATAACGTTATATGGACGTTGTAAACGTTAGATAAACGTT AAAAGAACGTTGTGTGCCAGCTGGGTTTACCCATATTTGATTTTGCCATT CTCTCACACTGCTTCTTAAAGTGTTCGTCATAAATAGAATTGTAAAACGT TCTTCACAATGCATTTCAGGTAGTGCAGCAAAACTGGAGAAAGCGAAATC GTTGGGAGCAGATGTCTTAGTGAATTACAAAGAAGAGAAATTCTCTGAAA GAGTCATGGATGCAACAAACAGTAACTTATTATGATCCTTTTTTCTCTGA TTTTACGTACATTTCAAATGTTGGAAATATCCTTGCAAGAATTTTAGGTT CCAATTCTAATTTATATTTTTTCTAAACGACTAAAAATGAAATATCTTAC TCCAACTTGTTTTCTCCTGTTGTTAATCTAGGGAGATAGAATTTAGCAGT CAAATCTCTTCCAAACATCGAAAATGGTGTCAATGTGACTTTTGTGGTGA GGTAAACTTGTCAAAATTAGAATTATATTTGATATTTATATCTTTTCTTG TAGAGCAAGGTGTTGACATCATTCTTGACCCTGTTGGAGGTTCAAACGTT GATCAGAACCTTGCCAGCATTGCTATGGATGGTCGTTGGGTTTTGTATGG ACTGATGGGTGGTCCTAAAGCATCGAATGACAAATTTCTTGCTCTGATGC TCCGCAAACGTGTCCAGTTACTTAGTTCTACTTTAAGAGCGAGGTCGCTC GATGTGAGTATATCTTCAGTGATCAAAGTTCTTCCTCACAGAATTTTTTT CAAAGTTTTCCGTCTCAGTTAGAAATGGTTATTTAGCAAGAAAAAGTAAT TTTATTCACTAGAATAATTCCATCAGAAAGAAATCTCGTATTAAAACTGT GTTTATGGCTGATTTTACATTTAGAGTTGCTTTAATTAACAAATTTTAGT GCCTTTCTAGCCAATCTAGGGGGTAAAAAGTCAGAAAATTTTCTGTCCTT CGGCCTCAACCATGGTGGGGCCTGTGGGTGTCACTGTATACCGAAATATC TCTATCAACAAATTTTCCGTCTCACAGAAAAAAACTGCTTTGACCACTGT ATCTTTTATCATAAAGGTCGGTATACAATTTTGTGCGAAAATGAGCAAAA AGTGAGCTGTTGTTTTTTTTAAAATCAAATAATACATCACCTTAAGCTTA ACTTTTGAACTGTTTGACTATGATGCTTTGTGAATTCCTCGCAATTCATT TACTTACTATTCTAAAATAGTAGCTTTTCATAATCACATTCACTAAACAT GGTATTTTCCATTCTAAATAGCATCTGGCTATTCCATTTAATACTCATAG GTATTTGGGGAGTGGACGAACCTTCTTTCAAAAATTCTTGAAATCCTGGA AATTGGGGGGGATTGTCGGATTACCCCCCACCNATAATCCTTCATCCGAA CTTCACCTTTTAAGTACAAAAAAGATTTGGTGGACTCATTTGAAAATCAT GCATTGGAAAAATTCGTTTCTGGTGAATATAAGCCCATCATCGACAGTAT CACGACACTCGATGGAGTTGCCGATGCCCATAGAAGAATGGATGCCAACC TCAATAGCGGTAAAATCATCATGAAAGTGTCAGATAGTCTCCTAGCAAAG GATGAGCTTTAGTCAATACATTTGTTGCAATTTATTTAGGGTTTTTTTAA CAACAGTTTTATAATCAGTTATAATTATTCTTTATTGATAATTTTACTAG AGAATTCGTGAAATTCTTTTATTTTACAATCCTAGGTATTTATTTAAAAA ATATTTTTGACTATTTTTGAAGTACGACTACTACCATAGTTAAACTGCCT TTGTCCTCTAGTAACCAGCTGTTATCGCCAGTTAAAAATAGCCGAAACTC AGGTCCGTAATTTCCATTCGTTGTTCACATGACTAAAGGTTAAATCTCAA AATTAGTACCTCACAAAATTTAAAGTTTTACTGTGGTGGTCATCTTTGAG ATTGAGATTGCCCTTTTTCATGTAGAGGAATAGTCAATCGTTTTCATATG ACAAAAAGGCCAATCTCAAAAGCAGAAAAAAATTGCAAGATTTCCAATTT TCCAAGACACTGATTTTGAGATTGAACCTTTAGTCATGTGGACGACGGTA TCATTTCCATAAAACCCATTCTGGTTATCCGAAAGTCTTGGCAGCCTCGT TTCGTCTTCTGAAGTTTTCATCATTCTTGAAAGTCCACGCAAGTCCTTTG TCCGTGATGAAAATATCCCATGGTTTTCTTATCTATATTTTAATTTCTCT CCTGGTTCTTTGCTCTCCATTATAATACGTTCAAGATGACTTGTACCTGA TCCAAAAGTGCAATCTTTGATTTTAATAAGAAGCAAACCAACTATACCGA ACAAAAAGATTGCAGGGAAAGCAACAATGATGATTTTGATAAATCTTTTG TCATTAGCACTGAACAGTTGCACTGGCTTTTTCTCTAGCATTCCACTGTC GATAAGTTCTTTGTTCTAAGGAAGCAAAAGAAACCTTTTTTATTAGAATT TTGGATTATATTCGGCTTGTTCTCATTTTTGAAGGCTCTGTCGAAGGATA TGTAACTTAAATTAAAGGCGATAACTTTTTTTTCGCTGAAAATAAAGTTT TCAAAATCTTCTTTTTCACAAAAGTCTTCATTCTTCTTCAATTTTCTTTT CATACGTTCTAGTTTTTCAGCTCAATTAAAAATGAAGAAATAAATAAGTT TTTGAGAAAAAAAGGAAGCATAAGCAAAATCAGAAATTTCGATCCCGAAC TCACAATTTCAATATTTGGAGCATCCATGTAAGCCTCCAAGAAAGCCTTA TTCATCATAATCAAAGTTTCATTGATGGCTGTAAACCCAATCGATTGGGA ATCAAATTTATGCTCGATACCAACTTTGACGTCATTTCCTAACCGACTGA TATCATCTGCTTTGATTTTATACGTCATATCATCAATCGCAAAAGCTGAA ATACATTAATCGTAAGTTATACCTTAAGGAAACTAATTTTAGCGGGAACT AGTTTTCGCGATCGAAAAAAAATTCCAAAAAATCGCATTTCTCCGGAATT AATTTTCGAGGTTTTGCCTTATTTTGGACACATTTCTTTCCTTTTCCTAG GGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCCCAGAAAAAACTGAATAATTTTTTGT AGGATTTGATTGGGTCAATGAGACAAAAAAAACAAACAGCGCTGATCTCT TCCAGTTCCAAAAATGTATAACATCATGCAGGTTTGAGGACGCGCTCACC TGTCTAAATCCAATTTTCTGTTGGTAGGTCGTCTGCCATTCAAAATTTTA CAAAATTGCTCATATTTTCATAAAAAATAAAGNAAGTTTCATTGATGGCT GTAAACCCAATCGATTGGGAATCAAATTTATGCTCGATACCAACTTTGAC GTCATTTCCTAACCGACTGATATCATCTGCTTTGATTTTATACGTCATAT CATCAATCGCAAAAGCTGAAATACATTAATCGTAAGTTATACCTTAAGGA AACTAATTTTAGCGGGAACTAGTTTTCGCGATCGAAAAAAAATTCCAAAA AATCGCATTTCTCCGGAATTAATTTTCGAGGTTTTGCCTTATTTTGGACA CATTTCTTTCCTTTTCCTAGGGATCTTTCAATTTTTTAAATGAAAAATAG CCAAATTTTATGATTCGAGGATCTAATTTTCGCGCTTTTGTCAAAAACCG CGAAAATTAGTTCCCGCTAAAATTAGTTCTCTCAAAATAGACTATAAGGA CACACTTACTTATCCCTGCAATGAAGATGTAAAGTCCAATTTTAAGATAA GTATCATTTTGAAAATAGATGTTGATCAATCAATCAACCTATCTTCAACG AGTGCTGAATGTTGAAAACTTAAAGATCGCTGTGGAACTTATCTGAGGAA ATACGGTTCTGTAATTGGAGCTCTTTCTAATTACCTCACTTTGAAGGTAG TATACTCTCTTTGTTTCATAAAAACCAATAGATTTTTTATCAGACTCTAC TGTTCTTATTTTTTTGCACTTTGAGCCTCAAATTCTTCTTATTATGTTCT TATTACAAGGTGAAATAGAGGTATTTTAGGTTTTATACCTAATTTTTACT ACTTCGACCTCTTAATTGCTAAAAATTGAGGAATTTTAGGCTCAGCATTG TTCATAAAATTGTTACCTTACTTTGAGCCTCATTGTTCTTATAAAACAGA GTATTTAAGTATTTTCTTTGGTTAGGGCTTTTTGAGTAGAATAATTATTT ACCTTCAATATTTCCTTTTTTCAGGGCTCTCATCATATCTTCAAACGAGG CGTATCCTTAAATCAAAAGAGATGAAAGAATAGATCGTTAATCAACAAGG ATGACAGATGTCTTCTCGGAGGTACTTTACTATGCATACACATTTTGTTA TAAGAACATCCAAAATTTTGAAGCTTTTAGATGTTCTTAACTTTTTGAGT TTTAAGCTTAACATGTCCCAAGCCTGTTTTTATTTTCACTATTTTGTGAG TATATTTGTCATTTTCCTAAGAAAATAGGTGTTTTAGTGTCTACAAAGCC TTAAAATGTTCTTAACTTGTTCTTAACATTTTGGCCCTCGAAGCCTTTAT ATGTTCTTATATAGTTTGTTCTTATAAAAAAAACGTGTATTATTTGATAA CCAAAATTAAAAACTTGCATTGGCATGATCAATATTCAGAATTTTATCTC TTCTGGTAGATAGAGGAAAAAATCCTATTTTCTTGTGGAATAGAGAAATC TTTTCTACCCTTGATGATTCGAATTCATCAATGGGCTCTTCCAGAAAATG TCAGTACATGGGGGTAGAGGATATATTGTCCGGGGAGTAGCGAAAAATCA TCAAAATTTGCCCTGTCCGGGGGGGGGGGGGGGAAANNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCCCCCATATTCAAATTATTTCTGGAAAAGCCCAAT TACCAGTTCATCAATGAATCTTGAAAACTATTCTTTTTCGATACTGTTTA ACTTGGTTGTATTAGTAAAAGAATCTATCTATCTTTAGACGATTAAAGAG TCCTTTCCCTTCTCTTCTGCTACCATATGGAATTAGTACACGTTTTTTTA TAAGAATAGTGTAATTCCATTTCATCATGGATATTCTTAATTTTTTTGGG AAAATCGTCCTAAAATATTCTTACAGCATTCTTAGGTTAGGATCCTAATT CAGACTAGATTTAACATTTAGTACATACGTCTCAAGCATAAAATGGCATT TTTGTGAAAGGATAAGCCTTACTTGGGGGTAATTGTAATTAATGCTCTAA AAATGACATTCTTAACCCGAGTAGAAAAATTTCATGATGGTGATATTCTT AGCATTATTCTTAATTTTTAGGCCATTTTCATCATGGACATTCTAATAAA GAGTATTCTTATAAAACAAATAGCGTTTTCCACATAGTAGCAAAGAAGAG TGCACACTTAAAACAAATGTACTTTAGAAATCTTATTTACTTACGAATAG GTATTCCACGATGCAATTTGACTGCTCTCATGGTGT

Coding sequence (CDS) from alignment at scaffold_213:696029..704764-

>TCONS_00052361 ID=TCONS_00052361|Name=TCONS_00052361|organism=Clytia hemisphaerica|type=CDS|length=6300bp|location=Sequence derived from alignment at scaffold_213:696029..704764- (Clytia hemisphaerica)
TACAAAAAAGATTTGGTGGACTCATTTGAAAATCATGCATTGGAAAAATT
CGTTTCTGGTGAATATAAGCCCATCATCGACAGTATCACGACACTCGATG
GAGTTGCCGATGCCCATAGAAGAATGGATGCCAACCTCAATAGCGGTAAA
ATCATCATGAAAGTGTCAGATAGTCTCCTAGCAAAGGATGAGCTTTAGAG
CAAGGTGTTGACATCATTCTTGACCCTGTTGGAGGTTCAAACGTTGATCA
GAACCTTGCCAGCATTGCTATGGATGGTCGTTGGGTTTTGTATGGACTGA
TGGGTGGTCCTAAAGCATCGAATGACAAATTTCTTGCTCTGATGCTCCGC
AAACGTGTCCAGTTACTTAGTTCTACTTTAAGAGCGAGGTCGCTCGATGT
AGTGCAGCAAAACTGGAGAAAGCGAAATCGTTGGGAGCAGATGTCTTAGT
GAATTACAAAGAAGAGAAATTCTCTGAAAGAGTCATGGATGCAACAAACA
GAATGGATTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCA
TATCAACTCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTT
GGTGCACGCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTA
AAGGATTACCAGGAACTCAAGTCATTGCTACAGCAGGGAAGGTGATCGTG
TAATGGCTTTATTAGCAGATGCTAAAAACATTCTTACAGTTATACGGTAC
ATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCACGGCCATGGCTG
CACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATCCATCACAACTC
TACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCAAATCATGATGT
TTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGACACCCTTCAAC
GAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATATTCTTGGCTTG
GAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTCCAAGGATTCAA
TACAAAAAAGATTTGGTGGACTCATTTGAAAATCATGCATTGGAAAAATT
CGTTTCTGGTGAATATAAGCCCATCATCGACAGTATCACGACACTCGATG
GAGTTGCCGATGCCCATAGAAGAATGGATGCCAACCTCAATAGCGGTAAA
ATCATCATGAAAGTGTCAGATAGTCTCCTAGCAAAGGATGAGCTTTAGAG
CAAGGTGTTGACATCATTCTTGACCCTGTTGGAGGTTCAAACGTTGATCA
GAACCTTGCCAGCATTGCTATGGATGGTCGTTGGGTTTTGTATGGACTGA
TGGGTGGTCCTAAAGCATCGAATGACAAATTTCTTGCTCTGATGCTCCGC
AAACGTGTCCAGTTACTTAGTTCTACTTTAAGAGCGAGGTCGCTCGATGT
AGTGCAGCAAAACTGGAGAAAGCGAAATCGTTGGGAGCAGATGTCTTAGT
GAATTACAAAGAAGAGAAATTCTCTGAAAGAGTCATGGATGCAACAAACA
GAATGGATTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCA
TATCAACTCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTT
GGTGCACGCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTA
AAGGATTACCAGGAACTCAAGTCATTGCTACAGCAGGGAAGGTGATCGTG
TAATGGCTTTATTAGCAGATGCTAAAAACATTCTTACAGTTATACGGTAC
ATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCACGGCCATGGCTG
CACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATCCATCACAACTC
TACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCAAATCATGATGT
TTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGACACCCTTCAAC
GAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATATTCTTGGCTTG
GAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTCCAAGGATTCAA
TACAAAAAAGATTTGGTGGACTCATTTGAAAATCATGCATTGGAAAAATT
CGTTTCTGGTGAATATAAGCCCATCATCGACAGTATCACGACACTCGATG
GAGTTGCCGATGCCCATAGAAGAATGGATGCCAACCTCAATAGCGGTAAA
ATCATCATGAAAGTGTCAGATAGTCTCCTAGCAAAGGATGAGCTTTAGAG
CAAGGTGTTGACATCATTCTTGACCCTGTTGGAGGTTCAAACGTTGATCA
GAACCTTGCCAGCATTGCTATGGATGGTCGTTGGGTTTTGTATGGACTGA
TGGGTGGTCCTAAAGCATCGAATGACAAATTTCTTGCTCTGATGCTCCGC
AAACGTGTCCAGTTACTTAGTTCTACTTTAAGAGCGAGGTCGCTCGATGT
AGTGCAGCAAAACTGGAGAAAGCGAAATCGTTGGGAGCAGATGTCTTAGT
GAATTACAAAGAAGAGAAATTCTCTGAAAGAGTCATGGATGCAACAAACA
GAATGGATTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCA
TATCAACTCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTT
GGTGCACGCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTA
AAGGATTACCAGGAACTCAAGTCATTGCTACAGCAGGGAAGGTGATCGTG
TAATGGCTTTATTAGCAGATGCTAAAAACATTCTTACAGTTATACGGTAC
ATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCACGGCCATGGCTG
CACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATCCATCACAACTC
TACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCAAATCATGATGT
TTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGACACCCTTCAAC
GAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATATTCTTGGCTTG
GAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTCCAAGGATTCAA
TACAAAAAAGATTTGGTGGACTCATTTGAAAATCATGCATTGGAAAAATT
CGTTTCTGGTGAATATAAGCCCATCATCGACAGTATCACGACACTCGATG
GAGTTGCCGATGCCCATAGAAGAATGGATGCCAACCTCAATAGCGGTAAA
ATCATCATGAAAGTGTCAGATAGTCTCCTAGCAAAGGATGAGCTTTAGAG
CAAGGTGTTGACATCATTCTTGACCCTGTTGGAGGTTCAAACGTTGATCA
GAACCTTGCCAGCATTGCTATGGATGGTCGTTGGGTTTTGTATGGACTGA
TGGGTGGTCCTAAAGCATCGAATGACAAATTTCTTGCTCTGATGCTCCGC
AAACGTGTCCAGTTACTTAGTTCTACTTTAAGAGCGAGGTCGCTCGATGT
AGTGCAGCAAAACTGGAGAAAGCGAAATCGTTGGGAGCAGATGTCTTAGT
GAATTACAAAGAAGAGAAATTCTCTGAAAGAGTCATGGATGCAACAAACA
GAATGGATTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCA
TATCAACTCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTT
GGTGCACGCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTA
AAGGATTACCAGGAACTCAAGTCATTGCTACAGCAGGGAAGGTGATCGTG
TAATGGCTTTATTAGCAGATGCTAAAAACATTCTTACAGTTATACGGTAC
ATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCACGGCCATGGCTG
CACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATCCATCACAACTC
TACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCAAATCATGATGT
TTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGACACCCTTCAAC
GAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATATTCTTGGCTTG
GAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTCCAAGGATTCAA
TACAAAAAAGATTTGGTGGACTCATTTGAAAATCATGCATTGGAAAAATT
CGTTTCTGGTGAATATAAGCCCATCATCGACAGTATCACGACACTCGATG
GAGTTGCCGATGCCCATAGAAGAATGGATGCCAACCTCAATAGCGGTAAA
ATCATCATGAAAGTGTCAGATAGTCTCCTAGCAAAGGATGAGCTTTAGAG
CAAGGTGTTGACATCATTCTTGACCCTGTTGGAGGTTCAAACGTTGATCA
GAACCTTGCCAGCATTGCTATGGATGGTCGTTGGGTTTTGTATGGACTGA
TGGGTGGTCCTAAAGCATCGAATGACAAATTTCTTGCTCTGATGCTCCGC
AAACGTGTCCAGTTACTTAGTTCTACTTTAAGAGCGAGGTCGCTCGATGT
AGTGCAGCAAAACTGGAGAAAGCGAAATCGTTGGGAGCAGATGTCTTAGT
GAATTACAAAGAAGAGAAATTCTCTGAAAGAGTCATGGATGCAACAAACA
GAATGGATTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCA
TATCAACTCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTT
GGTGCACGCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTA
AAGGATTACCAGGAACTCAAGTCATTGCTACAGCAGGGAAGGTGATCGTG
TAATGGCTTTATTAGCAGATGCTAAAAACATTCTTACAGTTATACGGTAC
ATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCACGGCCATGGCTG
CACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATCCATCACAACTC
TACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCAAATCATGATGT
TTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGACACCCTTCAAC
GAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATATTCTTGGCTTG
GAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTCCAAGGATTCAA
TACAAAAAAGATTTGGTGGACTCATTTGAAAATCATGCATTGGAAAAATT
CGTTTCTGGTGAATATAAGCCCATCATCGACAGTATCACGACACTCGATG
GAGTTGCCGATGCCCATAGAAGAATGGATGCCAACCTCAATAGCGGTAAA
ATCATCATGAAAGTGTCAGATAGTCTCCTAGCAAAGGATGAGCTTTAGAG
CAAGGTGTTGACATCATTCTTGACCCTGTTGGAGGTTCAAACGTTGATCA
GAACCTTGCCAGCATTGCTATGGATGGTCGTTGGGTTTTGTATGGACTGA
TGGGTGGTCCTAAAGCATCGAATGACAAATTTCTTGCTCTGATGCTCCGC
AAACGTGTCCAGTTACTTAGTTCTACTTTAAGAGCGAGGTCGCTCGATGT
AGTGCAGCAAAACTGGAGAAAGCGAAATCGTTGGGAGCAGATGTCTTAGT
GAATTACAAAGAAGAGAAATTCTCTGAAAGAGTCATGGATGCAACAAACA
GAATGGATTACATCAGTGCTGCTGCCATACCGGAAGTTTGGCTAACCGCA
TATCAACTCCTTCACAAAGTCAGTGCTATTCAACCCAATGAGCGGGTTTT
GGTGCACGCAGCAGGAAGTGGAGTGGGAACGGCTGCTATACAGCTTATTA
AAGGATTACCAGGAACTCAAGTCATTGCTACAGCAGGGAAGGTGATCGTG
TAATGGCTTTATTAGCAGATGCTAAAAACATTCTTACAGTTATACGGTAC
ATTGGTTGTACGCAATCTCGCTTATTCCACCTCCACCACGGCCATGGCTG
CACACATGAGAGCGGTCCGCATCAAATCTTTTGGCGATCCATCACAACTC
TACATTGAAGATCAAGAACCGATACCACAGTTGGCTTCAAATCATGATGT
TTTGCTACATGTAGCCGCCACTGCTCTCAACAGGGCGGACACCCTTCAAC
GAAAAGGCGGATATAATCCTCCAAAGGGTGCTTCAGATATTCTTGGCTTG
GAAGCTAGTGGTGTTATTGAGAAGATTGGATCTAATGTCCAAGGATTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033103XLOC_033103Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052361-proteinTCONS_00052361-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052361-exon-scaffold_213-1575043694:704404..704764TCONS_00052361-exon-scaffold_213-1575043694:704404..704764Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1575043694:703725..703756TCONS_00052361-exon-scaffold_213-1575043694:703725..703756Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1575043694:703232..703417TCONS_00052361-exon-scaffold_213-1575043694:703232..703417Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1575043694:702244..702345TCONS_00052361-exon-scaffold_213-1575043694:702244..702345Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1575043694:701762..701961TCONS_00052361-exon-scaffold_213-1575043694:701762..701961Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1575043694:699504..701050TCONS_00052361-exon-scaffold_213-1575043694:699504..701050Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1575043694:697394..697490TCONS_00052361-exon-scaffold_213-1575043694:697394..697490Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1575043694:696029..696064TCONS_00052361-exon-scaffold_213-1575043694:696029..696064Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:704404..704764TCONS_00052361-exon-scaffold_213-1510915933:704404..704764Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:703725..703756TCONS_00052361-exon-scaffold_213-1510915933:703725..703756Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:703232..703417TCONS_00052361-exon-scaffold_213-1510915933:703232..703417Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:702244..702345TCONS_00052361-exon-scaffold_213-1510915933:702244..702345Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:701762..701961TCONS_00052361-exon-scaffold_213-1510915933:701762..701961Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:699504..701050TCONS_00052361-exon-scaffold_213-1510915933:699504..701050Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:697394..697490TCONS_00052361-exon-scaffold_213-1510915933:697394..697490Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1510915933:696029..696064TCONS_00052361-exon-scaffold_213-1510915933:696029..696064Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:704404..704764TCONS_00052361-exon-scaffold_213-1491911889:704404..704764Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:703725..703756TCONS_00052361-exon-scaffold_213-1491911889:703725..703756Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:703232..703417TCONS_00052361-exon-scaffold_213-1491911889:703232..703417Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:702244..702345TCONS_00052361-exon-scaffold_213-1491911889:702244..702345Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:701762..701961TCONS_00052361-exon-scaffold_213-1491911889:701762..701961Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:699504..701050TCONS_00052361-exon-scaffold_213-1491911889:699504..701050Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:697394..697490TCONS_00052361-exon-scaffold_213-1491911889:697394..697490Clytia hemisphaericaexon
TCONS_00052361-exon-scaffold_213-1491911889:696029..696064TCONS_00052361-exon-scaffold_213-1491911889:696029..696064Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:696029..704764 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.9364 27.4522 30.5114 30.9715 6.59593 4.2325 6.45973 6.29968 5.98795 7.07469 4.48098 3.61455 2.76669 2.50481 5.52198 6.55767 9.42972 8.31207 1.09818 3.2717 3.51415 3.62974 12.1524 10.6494 4.96046 5.23455 7.45561 5.25632 9.26207 6.86216
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013154ADH_N
IPR013149ADH_C
IPR014189Quinone_OxRdtase_PIG3
IPR016040NAD(P)-bd_dom
IPR011032GroES-like
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
Blast
BLAST of TCONS_00052361 vs. Swiss-Prot (Human)
Match: QORX (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 1.264e-75
Identity = 150/335 (44.78%), Postives = 205/335 (61.19%), Query Frame = 3
Query:  117 MRAVRIKSFGDPSQLYIED-QEPIPQLASNHDVLLHVAATALNRADTLQRKGGYNPPKGASDILGLEASGVIEKIGSNVQG-FKEGDRVMALLAG---MDYIS-----------------AAAIPEVWLTAYQLLHKVSAIQPNERVLVHAAGSGVGTAAIQLIKGLPGTQVIATAGSAAKLEKAKSLGADVLVNYKEEKFSERVMDATNKQGVDIILDPVGGSNVDQNLASIAMDGRWVLYGLMGGPKASNDKFLALMLRKRVQLLSSTLRARSLDYKKDLVDSFENHALEKF-VSGEYK--PIIDSITTLDGVADAHRRMDANLNSGKIIMKV 1046
            M AV     G P  LY+++  +P P      +VLL VAA+ALNRAD +QR+G Y+PP GAS+ILGLEASG + ++G   QG +K GD  MALL G     Y++                 AAAIPE WLTA+QLLH V  +Q  + VL+HA  SGVGTAAIQL + + G   + TAGS  KL+ A+ LGA    NYK+E FSE  +  T   GV++ILD +GGS  ++N+  +A+DGRWVLYGLMGG    N    + +L KR  L++S LR+R   YK+ LV++F    L  F   G  +  P++D I  +  + +AH+ M+AN N GKI++++
Sbjct:    1 MLAVHFDKPGGPENLYVKEVAKPSP---GEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTR-MAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGGDI-NGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 330          
The following BLAST results are available for this feature:
BLAST of TCONS_00052361 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QORX1.264e-7544.78Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
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