TCONS_00052374 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052374
Unique NameTCONS_00052374
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1100

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052374 ID=TCONS_00052374|Name=TCONS_00052374|organism=Clytia hemisphaerica|type=transcript|length=1100bp
ACATCTGCATCAGTTGCCCTTCCTGGTATCAAGCTTAAATCAGACATCAC
AAGTAACTGCTAAGTAAATATCTAtgacaaataaataaaaatatcaataa
tttgGTAATGTCATTAagaaaaggagtattattgagGTCACATAGAAAAT
CAATCAGCGAGATGGATATGAAAACAAGAAATGCAAACACCTTAGATGGA
ACATATACAAAGGAGAAGAAAGaaacaaagaaaatcattGAAAAGGATGA
AgccagtcctcaaaaacaaaataaacacaACAAAAGtaaaaggaaatcaa
aagaaaccaagaaacaacatcaacaacaacaacaaaacaatagaGAAACA
AGCATTCCAATAGCACAAAGTACGCTCATTCAAACACCAATTGCCACAGC
TAAAGAGAAGAAACTATCTATAAGCATGATCGATGCaagtgattttttga
aaattgaaaatcNGTTGCCACAGCCAAAGAGAAGAAACTATCTATAAGCA
TGATCAATGAAAGTGGtatagattttttgaaaaatgaaaatcaaaatgag
aaaaaaaagatgCCAGTATCTTCACAAGAGAACATTGATTCCTTGATGGA
ATATAAATATAAAGTTGAACGACTGTGTGGTATACTTGGTCAATTTCAAG
AACAACATCATGAAGTTGTCAATAATTATCAAAAAGTAATCAAAGAAAAC
AAAGAATCAAGGGAGAAATTGAACCTAACACTTTTCGAATTGGAATCCGA
TAAATACCTACTGCAGCAAAATGTTCAAGAACTGACAGAAGAAAACCTGA
AGAAGAGCACCGAAATCGAATCATTAAAACAGAGAATAGAGGAATTGGAA
AAAGAAAGAGCAGAGCACATGGAAAAGGAACAACAAAGGGAACGCGAGGA
AACGGAACGACTGAAAGCTTTGGAATTGGAAAGGGAAAAAGAGGAACagg
aaaggaaagaaaaagaggaaaaagaagaaaaagaaaaagcgcAGAGAAAT
ATTACAGGTTTgtgatttgattgattgattgattgattgattgattgatt
gattgattgattgattgattgattgattgattgattgattgattgattgt
Run BLAST on NCBI

protein sequence of TCONS_00052374-protein

>TCONS_00052374-protein ID=TCONS_00052374-protein|Name=TCONS_00052374-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MINESGIDFLKNENQNEKKKMPVSSQENIDSLMEYKYKVERLCGILGQFQ
EQHHEVVNNYQKVIKENKESREKLNLTLFELESDKYLLQQNVQELTEENL
KKSTEIESLKQRIEELEKERAEHMEKEQQREREETERLKALELEREKEEQ
ERKEKEEKEEKEKAQRNITGL
Run BLAST on NCBI

transcript from alignment at scaffold_213:938475..947885-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052374 ID=TCONS_00052374|Name=TCONS_00052374|organism=Clytia hemisphaerica|type=transcript|length=9411bp|location=Sequence derived from alignment at scaffold_213:938475..947885- (Clytia hemisphaerica)
ACATCTGCATCAGTTGCCCTTCCTGGTATCAAGCTTAAATCAGACATCAC AAGTAACTGCTAAGTAAGTAAGTAGTAATCTAACTTTAATTTTGAGGCAA CCTGATTTACAAGAAATGGACAATCCATGATGACTGATGCACAGTTTTGA ATTGGTTTACAGATTTGGTTTCTATAAGATTGGAGTTAAATTTCAGCGAT TGTTAAAAAGAATTTTATTTTGCTAACTTCTCTTTATGTTTTTAGATATC TATGACAAATAAATAAAAATATCAATAATTTGGTAATGTCATTAAGAAAA GGAGTATTATTGAGGTCACATAGAAAATCAATCAGCGAGATGGATATGAA AACAAGAAATGCAAACACCTTAGATGGAACATATACAAAGGAGAAGAAAG GTATTTTCATAACTATTGGTAGTAATTTATTACACTTATTTTAATATCCT GAATGCACTATACACATAGTATAAAACTATAGCATGCAAGGTTTTGTGTT CAATTGCTGGCTAGGGAATACCAAAGAATTCAAAATAGAACTTGATTTCT CACTGCTTTAAATGCTCATTAATTAAAGAGAAGCATCATCAGTGGTAAAT AAAGGAAGAAAGTATTGCGCCATTCCCTAGATATCCATGTAAAGAGGAGT CTTTGGGTCATCACTGGTAATAATGAATAAGGTTTTACACTTTTTTTCTT CCCTAGAAACAAAGAAAATCATTGAAAAGGATGAAGCCAGTCCTCAAAAA CAAAATAAACACAACAAAAGTAAAAGGAAATCAAAAGAAACCAAGAAACA ACATCAACAACAACAACAAAACAATAGAGAAACAAGCATTCCAATAGCAC AAAGTACGCTCATTCAAACACCAATTGCCACAGCTAAAGAGAAGAAACTA TCTATAAGCATGATCGATGCAAGTGATTTTTTGAAAATTGAAAATCNGTT GCCACAGCCAAAGAGAAGAAACTATCTATAAGCATGATCAATGAAAGTGG TATAGATTTTTTGAAAAATGAAAATCAAAATGAGAAAAAAAAGGTATGCG ATATTTTTAGTGTTTTTGATGCAACTTTCCAATCAATGGCCCTTTTTTCC TTTTTTAAAGTTTTCTTTTCTCTTTTTTCAAGTTGACTAGATCAAAAATT TTCACCTGCCTGATTTTTTGGCTTTTATTTCGATTTCATGCCTAGTGAAA AGACCAACTTTGTGAATTTCTTTTCTGTTGGGCCAGGGAGAAATTCTGTT CTAATAACACCAAAATGAGGATTGCATGTTCAGAATGCAAAAATGGGCGT TAAAAAAGGAAATCATAGATTTTCATATTTGAATAAAAAATGGACAAACA GTTAAGTTTGAGTTCCATCTGTTGATCGTGAATTTTTATTAAAATATTTA CTTCTTCAAGCTACAGTGGAAGCTCTCTAATTCGACGTTCTACTATTCGA TAAGCTCCCGTTTTCGATGAAAATTTGAAGTCCCTTGAAGGTTTTTCGCT CTCTTATTCGATTTCTAGCGTGTAAAAAGGCCTTTAGGACGGGAGTTCGA AATTCAAATTTTCGATTTTTTTGCGTTTGAATTATAATTTCGAAATTCGA TTCCTCAAAACTTTTCAAAACAGGCAAATATCGAAAGTATCTNTTATAAT TTCGAAATTCGATTCCTCAAAACTTTTCAAAACAGGCAAATATCGAAAGT TTTCTTCCGAAGAACTTAGGTTAGGTTCAGCAAGAACTTAGACATTTGTC CTGATTCGCGTTCAAACCAATCGAGTCTCGCTTATATTTTTCTTTCTCAG CTCTATAATTCGATATTTACCTCGTGTTTATCGGATTAGGGAGACTTCCT ACTATTCGATACGCTCCCGTATTCGATGAAAATCCGATTCCCCTTGAAAA TCGAATTAGAGAGCGTCAACTGTATATACTGAAGATGAAGAATTGAAATG AAATATTATAACTAACACTTTTTTTTTTTTAATATAAAGTATGAACATTC GAAGTCATGTATAATTTAATTTGTACTTTGGACTTTTCACATTCAAGTTT TAAAGATGATTTTCTACCGGTATCAGTAATTAGGTAATTAGGCTTCCTTT TCGACGGTATTACGGTATTTGACCCAAATTTTTGTCGGTATGACGGTATT TAAGACCCCTGAAAATTCAAAAACGTTCTAATAGGCGTCAATTTTCTTAG TCTTTTTTTCGTGGTGAGTCTCCGATTTTGACATCTAAAGCGGAAAAGCG GAAAAATGAATTTCCAGGAGTTACAAAAAAGGAGTTAAAATAGTTAAAAT ATATTCTCAACTTCAGTTGAGTTAGAATCTGAGAATGTGTGTGTGTGTGT CTGTGTGTCTGTCTGTGTGTATGTCCCAAAACTTTGGGGCAGCCTGGAGA CTTTAAAAATTGTTCGATTTGGCTGAAATTTGGCACACTTGTTCCTTGGG GGAATATCTGGAGGTTTTTTTTTTTATTTAGATTTTTGGGGCCTGGGCAA GAGTTTTTTGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTC AAAAATTGTTCGATTTGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAA TATCTGGGGGTATTTTTTTCATTTTTTGAAAATTTTGATTTTTGGGGCCT GGGCAAGAGTTTTTTGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGA GACTTCAAAAATTGTTCGATTTGGCTGAAATTTTGCACACTTGTTCCTTG GGTGAATATCTGGAGGTTTTTTTTTTTAATTTTTTGAAAATTTTGATTTT TGGGGCCTGGGCAAGAGTTTTTTGCCAAAACGAGGCTAAAACTTTGGGGC AGCCTGGAGACTTCAAAAATTGTTCAATTTGGCTGAAATTTTGCACACTT GTTCCTTGGGTGAATATCTGGGGATACTTTTTGCATTTTTCAAAATTTTT TGATTTTTGGGGCCTGGGAACGAGTTTTTTGCCAAAACGAGGCTAAAGCT TTGGAGCAGTCTACAGGCCTCCAAAATGATCGGATTTGGTTGAAATCTGG CACACTTATTCATTGGGTGAATATCTGGGGGTCTACAATTGGGCCTATGA ATGATTTGAAGCCACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTCGACT ATTAATAAAGTCCCTTACCTTTCTCTAAATAGCTTGGACTTTTCCGAACC CTCCGTTTATTAGGCAGTAATAACAGAGCAATTAATTACATATTAGTAGA TTAGAGTAATAGATTGAGTGGCTCTGAAAAAAATAACTCTCACATCTTTA TCTCTTTCGTCGGCAGGTTTTTGAGACATTGCCAGACACAATTGAAGAAA TTGAAGAACTGATTTGTGAAGAAGAAGCAAGCCTGAATTGCCAATTTGAA ACTAACCCAGAGGTAGATCATCTTTTCTTTATCTNGATTAGTTTTTTCTG ATTTTTTGCACAAAGATGCATAGCTATAAACCCTCGAATGTGACGGAGCC CGATTTTCGGAAAAAAAATTTTTGGCCAAATTTGAGCCAAAAAACGGCTT AAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTGTTCT GATTTTTTGTATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCACG CAGATTTTTGCAAAAAAAATTTTTTGGCTCAAAAAACGCATGTTTATCTA TAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTC ATTTTTTTTATGAGATAGATTTTTTTTTGCCCACGAGGGCTTACTTTTGA AGAATATGTGTGTTTAGACATGAAATTTTGGCTACTTGCAGCGTGTTTTT ATAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATCAATTACT TAGGTATTAGCTTTTCTCGAGGTTCGCGCGTTCATTTTTTATGATTTTTT GCACAAAGATGCATAACTATAAACCCTCGAATGTGACGGAGCTCGATTTA TGAAAAAAGAATTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAAA CGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGATTT TTTATATTTGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCAAGCAG ATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAACGCACGTTTATCTATAA GAATCATTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCATT TTTTTATGAGATAGATGTTTTTTTGCTCATGAGGGCTTACTTTTGATGAA CATGTGTGTTTAGACATGAAATTTTGGCTGCTTGGCGTGTTTTTATAGAA AAACTGCCCAAATTCGATATTTTTTTACAAGCACATTATCAATTACTTAG GTATTAATTACTTAGGTAATTACTCTAGGTTGGCGCTTTCATTCTTTATG ATTTTTTGCACAAAGATGCATAACTACAAACCCTCGAATATGACGGAGCC TGATTTTCGGGAAAAAAATTTGGGCAAAATTGGGCCAAAAAACGGCTAAA AAACGGGTGTGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGTATGT AAGTAGGGAAAAGATGGCTCAAGCAGATTTTTGTAAAAAACGAATTTATC AGCTCAAATAACGCACGTTTATCTATAAGAATCACTATTAATAAGCATAC ATCAATGTTCTTAGTCAAATTACTCAATTTTTTTTATGAGATAGATGNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATTTTGGTTTCT AAACGCTTTTTTTATAAGAAACAAACGACTAATTTTAATAGATCGTCACT ATTTGTGTTCTGAATGATTGTTTAATGGTCACGCCCACTTATATATCAAT TATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACTTG TTATTTCTATAAAATGAAATATCTGATCTTTTCCTTCTTGATTTGCTCTT TCTGCTCAGGTTGTCTTCCTGGATTAAAATCAAAGAACAAAGTATCAACG ACTTCTACAACTTCCATTGACTAATAATTTCTGGATAGAATTAAGAGCTC TAGCTTATTTTAACTTCCTCTTAGTTAACCCGAAAAAATCCTCAATTAGT ACAGCCATTCGAACAAATTCCACTTACAGTTGAAATTGAGATCAGATCAG AGAGAGAGATGGGTGAATTTAAATTACTGTTTGAATAGACCTTAAAGTAA TCCATCTAGATGGGATCTGGATAAAAGGCATGACATGGAGGGAGGGCTTT CACGATTATCGGAGGACCTTTCTTGATCCTTTTTCTATACACAGCCTCGG AATTTGAAAATAAATATAACACGATAAAAAACAAAAAAGATTTTGATACA AAAATATATCACTCACGATTCACATCTTTATATATATGATAGTACCGTTT TCGTGTATCACCAGTCAAACAATACCAAAGCTCCCATACGATTTTTGTCT TGATTGTCTCATTTTCCGATGACTTACCTAAAGAAAAATTATTCAAAATA CAAGATTTTCACTAGTAGTCATTTAGAAAACGGGTGGGATTGAAATTTAA GACTGGGCTTCGGGTTTACTATAACCCTATAAAGTTGAAGAAAGGAGAAA TATTGAAGCACCCTCTAAGACCCTCTAACTACCATTGAACAATAAACCAT TGAAATCAAATGTGAAATGAACAAATTTGTAAAATTGCTCACTTTGAACA AAACACAAAGTGGAAAAGGAGTTTTGGAAAAACCCTTTACTCACAAATAA CAGTCAAACGACGAACGAATGAAATGATGTGAAAAACAACCATAAAAAGT CCCGTTGCTCACCAACATTCAAACAACAAATGAACAACGTTGGGGAAAAA ATTTTAATTGCCTGTTGTTCGTCAACACCACAAACAACGAGTGAACAACG CTAAAAATCATTTTTAAAAAGACGCTCGAACAACGAGTGAACAACAGTGT AAAAAAAGCTTCGAAAATAGCGTTGTTCACCGACACTTAAACAACGGGTG AACAACATAGGGGAAAAGCTTTGAGGAAAGCGTTGTTCACTGACATTCGA ACAACGGGTGAACGACAGCTTAAAAAAAAATTCGAAAAGAGCGTTGCTCA CCGACACTAGCCTATCGACTAAGTGTTGATTGCTAAAATGAACTTTATGA CTGTTGATCATCGACGGGTAACAACGGGTTTTCGACGCCTAGCGTCGATG ATCAACGACTAAACTACGCAGATGTCCCCGAGCGACGGATAATGGGTTAG CAGTGGAAGAAGTTCCACCGAGGCTGTAGAGACGGGTGATAAATTGATGA TATGTTTTTGGCAAACTCAAGATTTTCATGTATAAAATTTTTATATTTTT AGATGCCAGTATCTTCACAAGAGAACATTGATTCCTTGATGGAATATAAA TATAAAGTTGAACGACTGTGTGGTATACTTGGTCAATTTCAAGAACAACA TCATGAAGTTGTCAATAATTATCAAAAAGTAATCAAAGGTAAAATTTTCC TTACTGTTCCCGAATTATTATCCCTACAGAGCGGATTCAAACAGTGTGAG AGAAATGATGAATCGGATTTCCAAATTGGATGATCGAGAGACTAAANCAG GGGGGGTCAAGCCTCAGGGTACTAAAGCATAGCCGGTGGGGTGGGTGTTT TTCCAAAAAAAATTTGATAAGTACCCGGGTACTTTTTNNCAAGATAATTT AAGGGCTTTGAGACTTTAAGTATTGTTAAAAACCTGTGACATTTTTATTC TATCATTGGATGGTTAAAAATAAGTTACTTCTAGCATAAAATTTGACACG AAGAACAGATAAAAACACATTCTGCCATATAAAAATATCATCGATGAAAA GAAAGTTTTAAATTGTTTTATATTGTTGATGTAATATCAAAACATAAAAA GACCTGCCAAGAAAAAGAAATTTAGGGAAAAGTTTTGAAGTGAAAGTGAA AGCCAAGGTCCTGTTTTGTTTGTTTATAATGACTTCTCTAAGACATTCTG GGTGGGCACTCACAACAAAGCTCAATGAAGTATAACAAATGGAGTTTAGA TTAAAAGTGTTACAGATTCTCGTTTTCGATCGTTTTTAAAGTGAATTTTA CTTGGGTCTATTGCAACTGGTTATATTTAGTTTATATTAGTTTCTTATTT TATGTTTAGTTTTGCTAATTTACTCTGGTTTATACTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TGTTTTCATGTTTAAAAAATAAGGCAATCAATATACCCGAATGTATTACT GTAAATTACGCCTGGCTTATTAGTTGGGCTAATAGTAAAGGAAAATTAAA ATTAACTGTTATAAGGGTGGGTTTAATTTTGATGAGTGTAGAATTGAGAA AGATTATTAAGTAATAAATTTATTTTTTGTAGGTATAGGGTCTAAGAAGG AAAAGTCCTTAAGTACCCGGGTACTTTTTGGGTTGGTATGGGGTCTAGAA GAGAAAAGTCCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTATAGGGTCTAGAAG GGAAAAGTCATTAAGTACCCGGGTACTTATTTGGGTGGGTGGTATGAGTC AAAAATTTTTTTACATAAGTACCCTCTCTAGGCTATGCTTTAGTACCCTG AGGCTTGACCCCCCCCCCTGGTTCCCGAATTATTATCCCTACAGGAGAGC GGATTCAAATAGTGTGAGAGAAATGATGAATCGGATTTCCAAATTGGATG ATCGAGAGACTCAAAAAACCCATCAAAAGTATCTTTATTGTTTTAAAACT TTTTTTGTGAAGAACCCAGTTTCTACCTGGATTCTAAAACTGATAAATAA CTTGTGTGATTTTTTGGAAAGGCGACTTGGATCATTTTATTTTCAAAACT CTCTTGAGCTTGTTGGGGGAAAGCTACTATTGATGGGTATAATAAGGTAG TGCCCAATCGATTTAATTGTTTCCTTAAAATAAGGACTTTCATACCGTTA CTTGGTACTCTGATGTGGAAAGATGGCACTGTAGTATTTTCCTAATTAAA ACTCTGTACTTCAAACTAACTCTTTCTACAAACGAGAAAACAATGCCATT TAGAGATATTATTTTTGAGATATAAAGAAAGGAGATGCGTGGCACTTTGC TGGCTAAGCAGATTAAAGAAAAGAATAACTCTTGTTTCAAAAATGATGTG GAAGCAAATGGTAGGAGTTAAAAGATGTCCTTTAAAAAAGTAATATTCTT TTAGACAAGTAAAATTTTATTTAAAAATTTTTTTTTTTTAATTTTACTTG TCTAAAAACAACATGGCGATATCTCACTCAAAAAAGTAATAATTGTAATG TTTGAATTTCCTCTATTTTTTTTCACAGAAAACAAAGAATCAAGGGAGAA ATTGAACCTAACACTTTTCGAATTGGAATCCGATAAATACCTACTGCAGC AAAATGTTCAAGAACTGACAGAAGAAAACCTGAAGAAGAGCACCGAAATC GAATCATTAAAACAGAGAATAGAGGAATTGGAAAAAGAAAGAGCAGAGCA CATGGAAAATGAACAACAAAGGGAACGCGAGGAAACGGAACGACTGAAAG CTTTGAAATTGGAAAGGGAAAAAGAAGAAAAAGAAAAAGCGCAGAGAAAT ATTACAGGTTTGTGATTTGATTGANGCACATGGAAAAGGAACAACAAAGG GAACGCGAGGAAACGGAACGACTGAAAGCTTTGGAATTGGAAAGGGAAAA AGAGGAACAGGAAAGGAAAGAAAAAGAGGAAAAAGAAGAAAAAGAAAAAG CGCAGAGAAATATTACAGGTTTGTGATTTGATTGATTGATTGATTGATTG ATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGAT TGATTGATTGT

Coding sequence (CDS) from alignment at scaffold_213:938475..947885-

>TCONS_00052374 ID=TCONS_00052374|Name=TCONS_00052374|organism=Clytia hemisphaerica|type=CDS|length=2064bp|location=Sequence derived from alignment at scaffold_213:938475..947885- (Clytia hemisphaerica)
ATGGAAAAGGAACAACAAAGGGAACGCGAGGAAACGGAACGACTGAAAGC
TTTGGAATTGGAAAGGGAAAAAGAGGAACAGGAAAGGAAAGAAAAAGAGG
AAAAAGAAGAAAAAGAAAAAGCGCAGAGAAATATTACAGGTTTGTGAAAA
ACAAAGAATCAAGGGAGAAATTGAACCTAACACTTTTCGAATTGGAATCC
GATAAATACCTACTGCAGCAAAATGTTCAAGAACTGACAGAAGAAAACCT
GAAGAAGAGCACCGAAATCGAATCATTAAAACAGAGAATAGAGGAATTGG
AAAAAGAAAGAGCAGAGCACATGCCAGTATCTTCACAAGAGAACATTGAT
TCCTTGATGGAATATAAATATAAAGTTGAACGACTGTGTGGTATACTTGG
TCAATTTCAAGAACAACATCATGAAGTTGTCAATAATTATCAAAAAGTAA
TCAAAGATGATCAATGAAAGTGGTATAGATTTTTTGAAAAATGAAAATCA
AAATGAGAAAAAAAAGATGGAAAAGGAACAACAAAGGGAACGCGAGGAAA
CGGAACGACTGAAAGCTTTGGAATTGGAAAGGGAAAAAGAGGAACAGGAA
AGGAAAGAAAAAGAGGAAAAAGAAGAAAAAGAAAAAGCGCAGAGAAATAT
TACAGGTTTGTGAAAAACAAAGAATCAAGGGAGAAATTGAACCTAACACT
TTTCGAATTGGAATCCGATAAATACCTACTGCAGCAAAATGTTCAAGAAC
TGACAGAAGAAAACCTGAAGAAGAGCACCGAAATCGAATCATTAAAACAG
AGAATAGAGGAATTGGAAAAAGAAAGAGCAGAGCACATGCCAGTATCTTC
ACAAGAGAACATTGATTCCTTGATGGAATATAAATATAAAGTTGAACGAC
TGTGTGGTATACTTGGTCAATTTCAAGAACAACATCATGAAGTTGTCAAT
AATTATCAAAAAGTAATCAAAGATGATCAATGAAAGTGGTATAGATTTTT
TGAAAAATGAAAATCAAAATGAGAAAAAAAAGATGGAAAAGGAACAACAA
AGGGAACGCGAGGAAACGGAACGACTGAAAGCTTTGGAATTGGAAAGGGA
AAAAGAGGAACAGGAAAGGAAAGAAAAAGAGGAAAAAGAAGAAAAAGAAA
AAGCGCAGAGAAATATTACAGGTTTGTGAAAAACAAAGAATCAAGGGAGA
AATTGAACCTAACACTTTTCGAATTGGAATCCGATAAATACCTACTGCAG
CAAAATGTTCAAGAACTGACAGAAGAAAACCTGAAGAAGAGCACCGAAAT
CGAATCATTAAAACAGAGAATAGAGGAATTGGAAAAAGAAAGAGCAGAGC
ACATGCCAGTATCTTCACAAGAGAACATTGATTCCTTGATGGAATATAAA
TATAAAGTTGAACGACTGTGTGGTATACTTGGTCAATTTCAAGAACAACA
TCATGAAGTTGTCAATAATTATCAAAAAGTAATCAAAGATGATCAATGAA
AGTGGTATAGATTTTTTGAAAAATGAAAATCAAAATGAGAAAAAAAAGAT
GGAAAAGGAACAACAAAGGGAACGCGAGGAAACGGAACGACTGAAAGCTT
TGGAATTGGAAAGGGAAAAAGAGGAACAGGAAAGGAAAGAAAAAGAGGAA
AAAGAAGAAAAAGAAAAAGCGCAGAGAAATATTACAGGTTTGTGAAAAAC
AAAGAATCAAGGGAGAAATTGAACCTAACACTTTTCGAATTGGAATCCGA
TAAATACCTACTGCAGCAAAATGTTCAAGAACTGACAGAAGAAAACCTGA
AGAAGAGCACCGAAATCGAATCATTAAAACAGAGAATAGAGGAATTGGAA
AAAGAAAGAGCAGAGCACATGCCAGTATCTTCACAAGAGAACATTGATTC
CTTGATGGAATATAAATATAAAGTTGAACGACTGTGTGGTATACTTGGTC
AATTTCAAGAACAACATCATGAAGTTGTCAATAATTATCAAAAAGTAATC
AAAGATGATCAATGAAAGTGGTATAGATTTTTTGAAAAATGAAAATCAAA
ATGAGAAAAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033111XLOC_033111Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052374-exon-scaffold_213-1575043694:947819..947885TCONS_00052374-exon-scaffold_213-1575043694:947819..947885Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1575043694:947486..947640TCONS_00052374-exon-scaffold_213-1575043694:947486..947640Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1575043694:946843..947179TCONS_00052374-exon-scaffold_213-1575043694:946843..947179Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1575043694:941198..941333TCONS_00052374-exon-scaffold_213-1575043694:941198..941333Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1575043694:938835..939007TCONS_00052374-exon-scaffold_213-1575043694:938835..939007Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1575043694:938475..938706TCONS_00052374-exon-scaffold_213-1575043694:938475..938706Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1510915933:947819..947885TCONS_00052374-exon-scaffold_213-1510915933:947819..947885Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1510915933:947486..947640TCONS_00052374-exon-scaffold_213-1510915933:947486..947640Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1510915933:946843..947179TCONS_00052374-exon-scaffold_213-1510915933:946843..947179Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1510915933:941198..941333TCONS_00052374-exon-scaffold_213-1510915933:941198..941333Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1510915933:938835..939007TCONS_00052374-exon-scaffold_213-1510915933:938835..939007Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1510915933:938475..938706TCONS_00052374-exon-scaffold_213-1510915933:938475..938706Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1491911889:947819..947885TCONS_00052374-exon-scaffold_213-1491911889:947819..947885Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1491911889:947486..947640TCONS_00052374-exon-scaffold_213-1491911889:947486..947640Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1491911889:946843..947179TCONS_00052374-exon-scaffold_213-1491911889:946843..947179Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1491911889:941198..941333TCONS_00052374-exon-scaffold_213-1491911889:941198..941333Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1491911889:938835..939007TCONS_00052374-exon-scaffold_213-1491911889:938835..939007Clytia hemisphaericaexon
TCONS_00052374-exon-scaffold_213-1491911889:938475..938706TCONS_00052374-exon-scaffold_213-1491911889:938475..938706Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052374-proteinTCONS_00052374-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:938475..947885 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.9833 11.0937 11.0855 8.57734 62.4088 51.2086 18.5373 21.5199 13.8623 13.8675 11.312 11.624 4.77699 5.60317 6.74366 10.3814 11.747 12.373 3.78377 2.9471 6.69724 6.62137 11.781 12.0697 37.7466 35.6548 3.89844 2.24229 10.2408 8.51219
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052374 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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