TCONS_00052447 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052447
Unique NameTCONS_00052447
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2088

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052447 ID=TCONS_00052447|Name=TCONS_00052447|organism=Clytia hemisphaerica|type=transcript|length=2088bp
ATTTAgtgtaaaaaataattaaaatgtcAACATCAAAGACTCCAGATATA
GAGAAAGATGTTCAAAATGTGGATGATGCAAGATCGAAATTGGAAGATAT
TTTGaatgatatttttgataaaaatgaagatggACAAACTCCAGCTAATA
ATCTTGGTGATGATAAAGCAAAAAGagTGAATCCAACTTCATATACACCa
accaaaaaaaacttctctgGTCGTTATGCTAGaaagaacaagaaaaagaa
agacttatttcaaaatgAATCCtacaataaaaaacaaaaacCTAGTTACG
TTCTTAAACTGTACGATCGTCGAATCAATTTGGCACGTTTCAACGAGAAA
GCATCTTTGTACAAGATGTTGCgtgattggatgaaaaataaACCATCTTA
TGAAATGGACGACGATGAGGCTGAACTACAAAGCAGTAACAAAAAGAAGG
TTACCCAGATGCATCAAGAGTGAAGAAGATCAACGTTTGCCTTCTGTTAT
TGTTACTAAAACAGATAATATTGAAGAGGTGTTGGGTACCGAAGAAAACA
TAGAGTTTCTCAAACAAGACAACATGTTACGTTGGCGCACTGTCAGGCAG
AGttggAAGAATCATtcatttcaacaacaacagaaaGACATACCATCCCT
TGCTCTCCTCAAAACAATGATACCGAAATAACTGTCGGATGAAATAGAAG
AGAGTGGACTGTTGATTGGCTGGAGATCTATTGGCTGCTGTGAGATGGTG
CAGTCCTGGTTCCTGATTGGCTACAAACTATATTATAAGGCTACTCTTTT
CGTTCGCCATTGGTTATTGGTTAAGTGAATAAAGAGATTGATCAGGCATT
GGTTCATATGCATTAATAATTGACACAAGTGTAAAGTGGATCTTTCAGTT
AAAGATCACTGCTCACTGTGTTATGATAACTAATGGGattattaacattt
attaacATTAGCTTTAAAGTTGATGGTTGATTTGGACAAAATGATCGAAA
TTCCCATTCAGAATTTAATAAACATGGCACAACATAATCATGGTATGCTT
GTAACAGTTACTAAAACACGGATTCTGAGTATTGAACGTTCTGCAAAATA
TACTAATCCAATCCATCTATGTTTGTTTATTAATCATCTTTAATGAGTAC
TCAAGACTCAATTAGTAGGTGAAGCCGATGACTAGAGTTGAATCTCTGTA
CGATTTAAAGCCAATTACAcgtttttgttataagaacattcaaaattttt
gaagcctttggatataactttttgagttttaagcctaaaaatgttctcaa
catgttcttattttttgagcatttttgtccattttcctaagaaactgGGT
ATTCAGAGTCCTcaaaggcttaaaatgttcttaacttgttcttaacattt
tggccatcaaagctttatgttcttatatagtttgttcttataaaaaaact
tttatctcCTACATGAGTTGTTCGACCTTCGTTGTTTTCATACACACGCT
GGATTGGAAGTAACGTCGTAAAACACGGACACAAAAAAGGGCTAGATCCA
ATCCGTTAAATGTGGCGTGAGTTAAAGGCATCACTTTTGCTTGCATGGGA
AGGGTCGAAGCTTCCTCTCCAGCTTTCagcttgaaattcaatgttgaAAT
GCTGAGTGTTTGTGTGAGTGATCCGAAAAAATATCTTAATGACTTTTAAA
CTAAATAGTAGAGGACATGTTGCTCTCGTGTATAGCGTGGGCCTTTGTAA
TAttagtttaaaaaaatgaagaaattgagaaaatgaACAAATCAAGAAAA
TGACAACTTCTTCTCACCATCATAACAATTATGGTTACGTTTTGTCAATA
TCTTTTTTGAAACCccatgaaaacatattttgtttttaagttcctttctt
tttcttcttcttgtttttGTACCATGAAATGTACTATAAGTTGAATGTGC
TGAACTGGTTTCCTTGGTGAATGTGTTCAGCTTTGGCAATTTACAGTAAC
TTTTAAACTAACGTTTTTGGGTATCGATTGAACTTTTTCATAATCTCTCA
TTTCTTTTACCTGGAAGCCTACATAGACCTTGAGTGAT
Run BLAST on NCBI

transcript from alignment at scaffold_214:67570..85805+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052447 ID=TCONS_00052447|Name=TCONS_00052447|organism=Clytia hemisphaerica|type=transcript|length=18236bp|location=Sequence derived from alignment at scaffold_214:67570..85805+ (Clytia hemisphaerica)
ATTTAgtgtaaaaaataattaaaatgtcAACATCAAAGACTCCAGATATA
GAGAAAGATGTTCAAAATGTGGATGATGCAAGATCGAAATTGGAAGATAT
TTTGaatgatatttttgataaaaatgaagatgggTAAGTAATGTTATTGT
ATTATAANTTTTTGTGAAAATATACCTGTTTTTTTACCTTTTAGGCCCTT
TTAACATTTCTTTGGCATACTCTTTCTTATTATAGAACCGCAGCAGAAAA
TTTAATTATACGCTTTCAACTTAAACTTGGAAAAGCACAATGAAAATAGT
GAGGTcaggtagcacataaaaacgtaagaatacttcagatggtgattaaa
gcatgaaatttggcacagatgatccttagagggtctaaaacttaaNtgat
aaaaatgaagatgggTAAGTAATGTTATTGTATTATAACTTACGATGTAC
TGGAGTAGAATCCTGTCATACTGTATAAAATCACTAAGGAAGAAAACAAT
TCTCATGTAAAGTTGTTGTCCaaaacttttaatatttttggtaTAACTTT
TTGGTATAACAATTTTCTGCTGCCAAACGGAATGAATACCCAATATTTAG
TATAACAGTAGAAGTTTCTAAGATTCGTTATTTGGTAATTATCTTTTTGT
GACCCTTACCCTAGGAGATTTTCAGACAGGAATTACAATATATAACTTCT
TATAACATGCTACTAAAACCATTCTTTCCCTTTCTCATTTCCAGACAAAC
TCCAGCTAATAATCTTGGTGATGATAAAGCAAAAAGGTAGGTACCTCTCT
TAGAGAGAGGTTTAAACCTTTTATAATCCTAATTGATAAATAATTTCAGA
TGTTATTTGATGGTATTATAGCTCACAgtatatttgaaatattgtttctt
ttctttagagTGAATCCAACTTCATATACACCaaccaaaaaaaacttctc
tgGTATAGCCTTTTTTGATCGCAGAAAATTTGTTCTACTTTAAAGCATag
accgttgaaaagataaactTAGAGcactataagaaaaaaaaatctaaaac
tttcAAGCAATGAagacgaaaaatgaaaaagtgaaattttttatcCCTTG
GTACTAGTACATCCATTTTTGGCACAGAGGTACAGGTATTTCAGACTTTA
GTTGACAAAGTTGATTAGAGACATCATATAAATGTTTTTCAATATAATAT
ACTGTAATTTATACAATGGTATTtacttaactcgaacaagtttccaagtc
ccttcagttaacaatgccttataaaccttactccataactcaaaatttcc
ttaaaatcttgaaaaatttattGTAATTTATGATTTTGTTACTTTAGGTC
GTTATGCTAGaaagaacaagaaaaagaaagacttatttcaaaatggtagg
TTGGGGTTAACCTATTGTATCAGCAAGACTAAGATATCTGCTTCTATCTC
TATTGAAGATTTTAAGAAATCTTTCACTTGCGAACGGACCGAAACATCAA
TGCACTCTTCCACACTTAATCTTAGACTTGCAGTCTATTTTACGGTCGAA
AGGCATCATGGGGACTCAGGACCACCTTGCTCTGATAACGGCAAGATAAC
GGCTAATTGTTGCTCTATAATTTCGGAGAAGCTTTTTCCGTCACACCAAC
AGGAAAGTAGTACTTGATGCAGTACCAAATAAATTGACCATTGCATTAGA
AAAAGTGATCGAGTAGTGGCACTTTTAGGATATACTTTCCTAAAAACTct
tatcaaattttgatttaaaccTGAAAACAGTGAAGGACTTTGAggtcaat
tttccaaaatggGTTTTTTCGATCGTCAAAAAGTAATACAGTTTCATTTT
CTTAgttaaaatcttcaattttctttattcACAGAATCCtacaataaaaa
acaaaaacgtaagtttccaaatattttctttctttctttaattcaAGATT
TCCTGACCTTTTTTATCTTCCAATCTCGGAAAACCATTATGAAAGTAGTA
TTAGAGTCCCTTCCCCACTccttttttcctggaaaatgaGAACTAGAAAT
CTTTTTTAGGAAAGTCAGGGGGTATTAAAGGTTTGAAAAGCATTATTTCT
CAtttgaaatttatcttttttaaagTCTCGACTTTCCGTTCATGGACACT
AGGTTAAAATTGGATAACCTGCAAAACAATTTGTCATTTTCCTTGTCCTT
CCTTGTGGATTATCGGTACGAGTCTAAAATCAACATACCGAAATTCCAGT
ACTGTCAAGAAAATCCGCTAAAGCAGGATTTTTAGTTCGGGATGTTAGAA
CATAGCTTTTATCACAGGCTTGAATATATTTACAGGGAAtcatttttttt
cgggacacactgTAGACCATACCGAAAACCCAAAAGGATTCCATCTAGAT
AACTTGTgcttatgtttttttgtttttgatgattttttgtatctttgaat
tatttatatCATCAGAGTGAGTTGtaccatttttttttcttttacaccTT
ATATACATCTCTACATACCGGTTTTCAGCAAGGTAAGATTTATTTCTGCT
AAATTTGTTTCTGCTAATCTGCTTTTAAAAACACAATTGTATTATCTCTC
AGTTATAATCGAGGTCATTTTCAACCATGGAAATTATTAGCCCTCAAAGT
AAACGACCTACTGTAGGTGCGGCTCTTAAGTGTCCTTTTCCAAGCTTCTA
ANATCAGccctcaaggtaaacgacctactGTAGGTGCGGCTCTTAAGTGT
CCTTTTCCAAGCTTCTAAAAGTGCGCTgcaagggtcgaaatgagcgaATA
TGAGAAAAAGTACACTCTAAGGATGTAAAATTGGGAAAATCGTCCCAATT
TTCACCTTCAAATGGTCaaaaccttttaagaaaatgcaacgtaagggtcg
attttttgcTCGAATTTACTCAAATctggctaaattttctctgctCTGTA
AGGGTTTCGTTTTAAAGTCCCCGGGCCTTTCCTTCAAGATCAATGTTACT
TTTAATGGACTTTTAAGAAGAAGAACCTTGACtaataaaattattttcca
ataaATCCTATCCCTCAAGCATGTTCAAATGACATTTATTTTAAGCGTTT
GTGTCTCTAAAAAAAGATGTTACTGTATAATAGAAACTGTATAGGTATAC
ACAAAATGAACGTGTAAAACGGACAACATTtatcttctgaccagccacca
gaaccgttggaaaaccaacggatccggcgagactcgaactcacaaccatg
ccattcgcgggcatttgctctaccattgagctacgggtcTATGTGGAACC
CGAGGATTCAATTGCCGCTTGGTAAAgctggaagtgaattcttgtctact
gactGGTCAGAATTGGGAGAAAATAGGCATGGTTGTGAGTTGAATAGGCA
TGGttgagttcgagtctcgccggatccgttggtttcccaacggttctggt
ggctggtcagaagacaacattagagcgactgtattcaggACAACATTTac
ctttttttatcttttaatcaTTATCTAGTTACGTTCTTAAACTGTACGAT
CGTCGAATCAATTTGGCACGTTTCAACGAGAAAGCATCTTTGTACAAGAT
GTTGCgtgattggatgaaaaataaACCATCTTATGAAATGGACGACGATG
AGGCTGAACTACAAAGCAGTAACAAAAAGAAGGTATGTCGAGGCAATGAA
GAAATTATGatttgtatatgtaatcacatgataacgagtgcaattcgaga
ataattgcacaagtgatttttttttattggacctaccccggcggaggtcc
tttaaattaaccgttgtatgttcgttcgttcgttcgttcgttagttacca
gcttttctcgagattggctcattagttttttctgattttttgcacaaaga
tgcataactataaaccctcgaatgtgacggagcccgattttcggaaaaca
atctttttggccaaatttgagccaaaaaagggctaaaaaacgggtttttt
ggactaaattggatcattaattttttctgaatttttgtatgaaagtaggg
taccatcataggtaaaagttggctcaagcagatttttgcaaaaaaatttt
tggctcaaaaaacgtatgttatctataagaatcactattaataagcatac
atcaatgttcttagtcaaattactcatttttttatgagatagatgttttt
tttttgctcatgagggcttacttttgatgaatatgtgtgtttagacatga
aattttggctgcttggcgtgtttttatagaaaaactgcccaaattcgata
tttttttataagaacattatcaATTANTTTATAGAAAAACTgcccaaatt
cgatattttttaattagcacattatcaattacttaggtattagctttacT
CAagctttcattctttatgatttttgcacaaagatgcatttattggacct
accccggcggaggtcctttaaattaaccgttgtatgttcgttcgttcgtt
cgttcgttagttaccagcttttctcgagattggctcattagttttttctg
attttttgcacaaagatgcataactNNNNNNNNNNNNNNNNNNNNNNcaa
tgtgacggagcccgattttcgaaaaaaaaaatttgggggcaaatttgggc
caaaaaaaggctaaaaaacgggttttttggactttgtgaaaaattggatc
attaattttttcagattttttgtatgaaagtaggtaaaagatggctcaag
cagatttttgtaaaaaacgaatttttcagctcaaataacgcacgtttatc
tataagaatcactattaataagcatacatcaatgttcttagtcaaattac
tcaattttttttatgagatagatgtttttttgcttgcttgaatatgaaag
aatatttaaagagcatgaaattttggtttctaaacggttttttttataag
aaacaaacgactaattttaatagatcgtcactatttgtgttctgaataaT
TGTTTGATGGTCACGCTCACTTAGacatcaattatatatgtgttaaatgc
ataaccaggtaggtccattaaagtatcacttgttaatttcccgagtccga
aaggacgaggaaaattcgaaacaaaacaaTCACGAGTGAAATTTTCGAAG
TCTaagagttattatgtgattacgagctaatcgcactaCTTTTTCCCCGT
TAGGAAAAGTAAATTCCACTTAAAgtcatatttttctcttctctctatgt
ttttcttttattgttgtttatagattttatttctctcaaaatgaatctcg
aatgcaattaaaacgttcgatgaaaaaaactataagaaaaaaacattaaa
gtcaattttgtaaacatttgcgctgcattgaagagtgtgatttacgatta
attgctctctacaggatgcgattaacgattaattgctctctttgaaggag
cgccaaataagaaaaaataactcatcatGCGATTAAGTTCTAAACTTCGC
CTGCAAATCGAGCACGACTTCGTCTCGttatttttctcctttattAACAA
TCTGCTGTTTCATCTGGGGTGTCGAATTTAGTGATCCGTAGCGCCCGTAA
AAAAAGGCTGTCAATGCTGTACTTGAATAATATTGTGGGGACATGGAGCA
ACTGCCCCCTTCAGTAGCTCAGAAGACAAACTATCCAAGATaattcttga
tttcttttttagtgAGGGGCTGTCAGGCTGCACACTTTCGCCTCTCTAGT
CTTGGTCTGACTTCTACACTAATGAGTTACTACCTTGTCAATTTTAAACA
AATCCCGAATTTGATTACTTTGAAAATTAAAGCTTAAACCAAGACTAATT
TTTTCGACCAAAACTTTTCGTCATCTTTTCTATCAAAGTGGTTGCTTTCC
TAATTTAATTTACTGGAAACAAAGCAATTCTTTTTTAAACTATTCTAAAT
TCCCTCTTAATCCCACTAAATCACCTGAAAATATTTCCCTTGAGTAACTT
GAGTAAGTGATCATTATTCTTTTTCTGCAGGACACGTCTAATGAGCATCA
TGTATATGAGTAAGctattctttcatattttctttcgataattttctcat
tttttgtttGGTCGCACAATAATTCACTCCATTGTCTTTAGCAGTGTTCA
AATGCCCGTGTTCGATTATTGTCACATCAAATTTTCGTTTCCGTCACAAC
AAAGATCGGTCGAATCTACTTGTTCATGGTAactggctatcgaagccttt
tGCTCTTttacagtttgtttttttagGTTACCCAGATGCATCAAGAGTGA
AGAAGATCAACGTTTGCCTTCTGTTATTGTTACTAAAACAGATAATATTG
AAGAGGTAATTATCTATCTTCGCCTTTCAATTCCTCGTAATAAGCTTTTG
ATACAATGTGCTTTTCAGTTTGATAAGAAAAGTTCCTTGTTATAATTCAA
GGGTGCTTCACAGATTTATCCGTGTTATTAAATAgtatattaagcagata
ttcgacaagaaaaatcggatatcgaaaattattcagtcgagcttgatgat
attcgCTGAGTCGAATATCATTAAAGCGACAAAAGTTACGactccgacca
tttttgaaattaCGATAATTCAGTATTCGGATGTAGCTTTTACGGCTGAC
TTCATTTGGTTCTTACGTAATTGATACCATATACCTTTGAGTGGGGTCTC
CAATGAACTTTCAGGGAAAAATAATACATGTCTGTCTCATTTACGCGTGT
TTCATTTTCACCACAAACACACGGTCGAAATGAAGAGTAACGaagaatca
aaattgaaaagcCAAACCATAATTTTACTTCATATATTATATGTAAAACC
CCCTCCATGTCTCTCTACGCGTGTTGATGCTAAACCGCAACTATTATAGA
TATTTCACATAACTTTTCCTACAAAGAGACGATCAATATTTTTTACTAGA
GTCTAATAATTTAAATCTTTTTAGATATGTTGTCAAATCATAAAACATTC
TTTAAACACAAAAGATATTCACTCACCCGACAACAATTTACCACGCCCCA
GATCCCCTTACGGTTTCATAAAATTTAGACGATGTGGATTTGCCAGGAGT
TTCACGCTTCTCTATCGATATATAAATGaaaagtagttgcttataagaaa
agtctacacgtttttttttcaataagaacatccaaaatttctgaagccct
tggatgttcttaactttttgagttttgtaagcctaaaaatgttcttagca
tgttcttatttttgccattttttgaatatttttgtccctttccttaagaa
attaggtgtttcACGaagccctaaaatgttcttaacttgttcttaacatt
tttgccatcgaagccttatgttcttatatagtttgttcttataaaaaagt
ctaGGTCGTCTGTTAAAATTTTAGCACATTTTAGCACATAATATAGGGTA
TTGTTTTCATAAGTGTTTATCCCTCTCAATCAGGTGTTGGGTACCGAAGA
AAACATAGAGTTTCTCAAACAAGACAACATGTTACGTTGGCGCACTGTCA
GGCAGAGGTATGTTTGATTCTTACTATTTTTGAACAGCTCTATCTTTAAT
ATCTTGTATAATAGAGCTGACATTATACGCCGCGTAAGAAATTTGACGAA
GGAAATCACATGCGCGGATTTTCTCGTAACGATTACGGtggtatatcttt
ttttgaacgGCTTTTCAATTCTTATGCGCGGTATCTTTTTCAATCCAAAC
CGTGTGGGCTTTTCCCAAAATATTCTATTTTTATGGTTTTGTACCTTTAT
TTAATATGCCCTTTCGATCCAAATCATAtgggaaaatttgaattttaacg
GGAATGGTATTGCTTTACATTATTAATTGGTTGGTTCTGTTTGTGGTAAA
CTCCTAACCCTTAATCCAATAATCGAGGTTTAAAGAGTTACATTTTCTTT
TGTgtatgaatttcaaaaaaaaatctgttatTTCTTCAAATCATGATCCT
ACTTATTCTAATTCCATCTATTTACAAAGAAATCCttttatttataattt
atatTACATGTTACTAAAAAATTTGTTCGTTAAATGCACACAAAAAAGTT
TCCCGCACCCTTTCAACGCCATCTTTCTTTAAACATATTTCTTACTGCGC
TCACTTGAAGAAGTTGAGTTACTCCCTTCATGTTTGCTTGGCAGCTGCCT
AAAATAATCTTGAAAATCGCTTTCGTATTGCATATCCCGTCTTTCGACAT
TTCTAGCGCTCGGTAGTACTTCAGGTCCTCTTCGCGAGCGAAACGGGAAA
AGATCTGTACACTCAGCCTGTGAGCACGGTGTTGAGTTGGTACTAGTCCG
TGATGGGAAATTCTCACTTCTCGGAGAAGGGTATGACCTCGGTGTGGAGC
AACAATGGCACCCACCTGAGCCTCCGCCACATGATGAGCTATGATGATAA
GGGCGGCCGCCCGTGTTTTGTTTACTTCCGAGATATCGTCTTGCGTTGAG
AGCGGGCAGTGAGGCGAAATGTGCGGGTGTAAGACGACTGTAGCGTGGAA
AGGGATATGGATGATATGGTATCAGGTATCCTGAAAGGAAGATGAAAAAG
CTTTTGCTTAGAGATAATTTAAAAGTTATAGTTCATAATAATCAAATACA
GTCGGCATAGTTATGGCATACTgttctgaattatttttctctTCAATGAA
ATCCTTGATTTCCTTTCGcaatttaatttaatgttcTATTTCTAATAAAG
TATAATAGAAAAATCtaatttgtttcaattttttctgaagaattttttaa
tttgattaaatctgtgaattcattttgaatttgtatatgatttctttaaa
gaataaatgactgaaagaaaattcagaattttcaaaatatcatttgTCTT
TCTTTTGGTTGCTATGATGCCTTAAACAATAGAATCCTAATAGATATGAT
TCGTGATTTTAAATAAGATATTTCGTCTACGGGAGGTTGTGGACACTACA
CGGAAATGAGTATCGATTATCGAACTAGCCATATCTAaaagttttattgt
tttatagaaattttcattttaaaaacagatttttcattttcatttcgagG
AACCACATAATGGTATTGTTTCCTAAAAGATATTACTAAACTATCGAATA
TAGGAGAGAGATTGTTAATGTAAAATGTAAacgataaaagaatatattaa
tttGGAATGgttttgaccataaaaacaGTCTACAAAACCCTTAGAATCGT
TTCTGATACTGTGACGACAGCATGGTTCTCGGACTACCTTACTGTGAAAT
TAAATCTTTCACTTGATTTTATCTTCTAGATCGTTGACAAAAAGGCTATA
TTAAACTTACATGTAATtttgataataataaaaaaCCAGAAATTCTAATT
CTAAGCCAAAAcacatttcatttaaaaaatgatataaaaatgtCCCGTAC
TAGAttctgaaattcatttttttcataaagtaGCGGGCCAGTAGCCCTTT
acacggaaacacccgaaaaagaCCGTATATCGGTTGACacattaaaataa
atatattttactATTCACTATTCTTAGGTTGAATAAGATGCAAGTCCGTT
TTGGTATAATAAACTTGCATCAAGTTCTTGTCaatttaaaaatacaaata
aataaaaatctgGATAACCCAGTCTCATAGAAATATTTATCATTTCCTTT
TCAATGCAACGTTTCAAAAGCCATCAAtaatcaaattttcaacaataaAA
CTAGTGGGGAACTTCAGCTTTTTTTCGAGGGCTCCACAAGAAAAATTAGA
AGAAGCGTAGGAAAGAAATGAGTCTTACCTTTATCCACTGCTTCTTTGTA
TTGTCTCTTCATTTTCATTCTACGGTTTTGGAACCAGGTTTTAATTTGAC
AGTCGGTCAAGTTCAGCTCATCAGCCAATATCATTCGTTCCGTGTGATTA
AGGTATCGTTTCTCTTGGAAAGAATCTTCAAGTGCTTGTATTTGATCTGG
TGAAAAGGACGTGCGCGGCTTTTTGGCGTCGTTTAGTGACGGTGAATACA
AGGAATGAGCTGTAACAAAGATTAAGGGGTATTTTCTTTATAAATATTCA
CAGTAGACACAACTGTTTGTATTAACCTATTACTACCATAAGACCTAAGT
GTATTTTCCCTAAGTAACGTTGAGTAAAACTGAAAGGATTATCTGCTAAA
ACTAATAATAAGCGAAGAACCTTAAATGCATAGGTCAGCatgaattgctc
aaaataattacTTTCGTTATGGGGGGTAGATAACAAAGTAATCGatcttt
tttttgttgctaaatTGATTGCCAAATGGCTCTGAAACTGAAATTGAAGC
CGAAGTTGAAGCCGAAGCAAGCAGATTCCTAGCATTGATTTATTTAAGAC
ACTTACCATCGGGACAAAGTCGTGAGTAATTTTGAGTCGGTGAAGGATGA
ACTAATGTAGGTGAAAGTGACCGTGATCGAGTACAACCTAACATGGTAGG
TGACATTCTGTCGATGCTTGGATGACGTTGTTTCTCTATATCAATGCCAC
ACAACGACGTATTGGGATGATCATCTTGTAAATATAGAACAGGAGACATT
TGATCCGGCGATGAACCATGACTGGACGATGACGAGCATAAGGACGGCTC
TGATGACGGCATCGGTCCATTATTTGAGGCGGTGGACGATAAACAACTAG
TGCTCCTTAAAACGTTGTTCGATACACTGAATAGAATGTCATCAATACGA
AAACCTTTCTTATTGCCAATACCACCACCACTAGTGTTTATACTGTTACC
AGAACGTTGCGCCTTGCTATAAGATGATCTACAGGCTGGTGTTGGTAACT
CTTGGTTATCGCAATTCAGATTATCAGACACCAATCCATGGTCAAGCATC
ACTTCTTCTCCAGCATCATTCAACACTAATATATCTTTCGACATTCTCTC
ACAGTTGACCAATATCAGGTGAGAATCCACTTGATCTTAAGAGGATGTAC
GTTCCCTCACAAAGGTTGAAAGCAGATTAAGATTAGCCCAGAAGCAAATG
TTTCTTTTCCTCATACTTCATCTGANNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNACATATTTTAATCCTTGAAGGGTAAAAAATGTC
TACTACTAACTTTTTAAGAAGAAAGTTTTCTTTCTTTAGTACTGCGTTAT
CTTCATTAAAGATCTTTTCAAATTCAGATATTCCTGAAGATATTGTTTTT
CTGTTAATTCGCCTTTTTCATACTAAAtgcatttagaaaaattagcGAAA
ACCTCAATGGTTTTGTGTATTACTATAAAAATTAAAGCCCTTATCATCTC
TTTTTACGAAAGTTAAAATAAAGAACAGGGCACAATActtatatttaaaa
aactgacttttctTAATTGAACTAAAGACCAACGCCTATTGTAAAAATCA
GCATAGTCTTGACaaacaaaactattttttgcgtTTTATTATCAGTCATA
GAAAATCTTATCATCCCATTCCTGTTCTATTTCTTTTGCATTTGACGAAG
ATTATTCtcgtttcaattttcaaaggaagatAGAGTGAGTAAAAAGGGTA
TGGGGTCATTTGTATATAGTTTCAATAAATTTAATGCGTTCTAAACGTAG
TGCGAGAGCAGACAGGCCAATCCTTTCATCTTGATGGGAGATGAAAATAT
AAGAAAAGGTTAACTATTACATTATCGAAAagtatcaaagaaaaaaatga
tgatcaaataaaatatagatttcatatagaaataatcaaaaagaaattac
tAATTCCAAAAGAACTAATACACTTAACGCGTTTGAATAATTTAGAAGAT
GGATGTCTCCTTGTCTTTAGCAAGGTGTGCTGTGGTTAGTAGATTTTTCT
TATCACTTGTTGCCTCCCATCATCCTAAATTCCATCCTTTGGATgaacct
cccccccccctaatTGCTTCTTTGCCTCATCTTTCGTAAGTGCCTTTTCG
AAAATTCGCAAAAAGATCTTTTTAAGAAAGACATTTAATTCTGCCATGAA
TCTTCTTTGTTCCTGCCTTTCATGACCAAAAGCGTGACCCAAATAGATTG
AAAATGTATCGATCCGAGTGTGTTTTTTCGACCTTTTTTGATCTCCCTAT
CAATCAATATGCATGTTCCTTTGGTCTAGCATTTGTCTTTTGCTTTGTAT
TCTAAAATGAACTGACAGACATTTGTGTAATAAGTAGGGCTGGAACAGGG
GTGTATCAAAACCGAACTGATTGACAGGGCTGTATCAAAAGATTTCTGAT
ACAGGGATGTATCGAAATTGAACTGACATAGGGGTGTATCAAAATTGAAC
TGACACAGGAATAGATCAAAGGAGCACTGATAGACAGGGCTGTTATCAAA
AGAGTAATGTCTAAATGGTGTATCAAAAGTGAGCTGAAACAGCGAAACAA
ACAAGACAAAAGAGCTCTAACACAAGGATGTTTGGGCTATCAAAGGGGGG
TTTGGACAAGTTCGAGATTTATCGTCGATTTTCTCAAACGACAGACGAAA
GCCCTAACATGGGAAAGCAGAACGTGGCTACTGTTGTACTATCATAAACA
AGTCCTTgcctaaaaaaatccaaaaatgtaTCTCATCATTTTGAATCGAG
TCTCtgaattttagatttcaacCTCTTCAGTAGAGGCGTTCGGATTATTT
CTCTAAGTATTAAGAGACAAAATGAAGAacggaattaaaaaaaaaacatg
ttattATAACTGTTACCGCACATAGCATAGGGTAATTTTTGTGGGCCTCG
TTATGGTTAGCAAAATGCATTTTTTGCGCTTCCAATACTTATGCTATGCC
TTTATTGTTGTAATGTATTTTGCATTTATTGCTTGCTTTGATGTAACTTT
GGAGATTAAATGCTTGAAGAATTTGTGAAGGTCAGCATATGCTCGAATGC
TTATGTTTTTGCAAGATTTGAGcctggatatgcttataagcgttaagctt
acgaataaaaaaaaatatgtattgtTATTATaacgttttatttttttcag
ttggAAGAATCATtcatttcaacaacaacagaaaGACATACCATCCCTTG
CTCTCCTCAAAACAATGATACCGAAATAACTGTCGGATGAAATAGAAGAG
AGTGGACTGTTGATTGGCTGGAGATCTATTGGCTGCTGTGAGATGGTGCA
GTCCTGGTTCCTGATTGGCTACAAACTATATTATAAGGCTACTCTTTTCG
TTCGCCATTGGTTATTGGTTAAGTGAATAAAGAGATTGATCAGGCATTGG
TTCATATGCATTAATAATTGACACAAGTGTAAAGTGGATCTTTCAGTTAA
AGATCACTGCTCACTGTGTTATGATAACTAATGGGattattaacatttat
taacATTAGCTTTAAAGTTGATGGTTGATTTGGACAAAATGATCGAAATT
CCCATTCAGAATTTAATAAACATGGCACAACATAATCATGGTATGCTTGT
AACAGTTACTAAAACACGGATTCTGAGTATTGAACGTTCTGCAAAATATA
CTAATCCAATCCATCTATGTTTGTTTATTAATCATCTTTAATGAGTACTC
AAGACTCAATTAGTAGGTGAAGCCGATGACTAGAGTTGAATCTCTGTACG
ATTTAAAGCCAATTACAcgtttttgttataagaacattcaaaatttttga
agcctttggatataactttttgagttttaagcctaaaaatgttctcaaca
tgttcttattttttgagcatttttgtccattttcctaagaaactgGGTAT
TCAGAGTCCTcaaaggcttaaaatgttcttaacttgttcttaacattttg
gccatcaaagctttatgttcttatatagtttgttcttataaaaaaacttt
tatctcCTACATGAGTTGTTCGACCTTCGTTGTTTTCATACACACGCTGG
ATTGGAAGTAACGTCGTAAAACACGGACACAAAAAAGGGCTAGATCCAAT
CCGTTAAATGTGGCGTGAGTTAAAGGCATCACTTTTGCTTGCATGGGAAG
GGTCGAAGCTTCCTCTCCAGCTTTCagcttgaaattcaatgttgaAATGC
TGAGTGTTTGTGTGAGTGATCCGAAAAAATATCTTAATGACTTTTAAACT
AAATAGTAGAGGACATGTTGCTCTCGTGTATAGCGTGGGCCTTTGTAATA
ttagtttaaaaaaatgaagaaattgagaaaatgaACAAATCAAGAAAATG
ACAACTTCTTCTCACCATCATAACAATTATGGTTACGTTTTGTCAATATC
TTTTTTGAAACCccatgaaaacatattttgtttttaagttcctttctttt
tcttcttcttgtttttGTACCATGAAATGTACTATAAGTTGAATGTGCTG
AACTGGTTTCCTTGGTGAATGTGTTCAGCTTTGGCAATTTACAGTAACTT
TTAAACTAACGTTTTTGGGTATCGATTGAACTTTTTCATAATCTCTCATT
TCTTTTACCTGGAAGCCTACATAGACCTTGAGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033168XLOC_033168Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052447-exon-scaffold_214-1491911889:67570..67702TCONS_00052447-exon-scaffold_214-1491911889:67570..67702Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:67570..67702TCONS_00052447-exon-scaffold_214-1510915933:67570..67702Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:67570..67702TCONS_00052447-exon-scaffold_214-1575043694:67570..67702Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:68314..68355TCONS_00052447-exon-scaffold_214-1491911889:68314..68355Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:68314..68355TCONS_00052447-exon-scaffold_214-1510915933:68314..68355Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:68314..68355TCONS_00052447-exon-scaffold_214-1575043694:68314..68355Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:68478..68521TCONS_00052447-exon-scaffold_214-1491911889:68478..68521Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:68478..68521TCONS_00052447-exon-scaffold_214-1510915933:68478..68521Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:68478..68521TCONS_00052447-exon-scaffold_214-1575043694:68478..68521Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:68917..68964TCONS_00052447-exon-scaffold_214-1491911889:68917..68964Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:68917..68964TCONS_00052447-exon-scaffold_214-1510915933:68917..68964Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:68917..68964TCONS_00052447-exon-scaffold_214-1575043694:68917..68964Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:69454..69477TCONS_00052447-exon-scaffold_214-1491911889:69454..69477Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:69454..69477TCONS_00052447-exon-scaffold_214-1510915933:69454..69477Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:69454..69477TCONS_00052447-exon-scaffold_214-1575043694:69454..69477Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:71094..71251TCONS_00052447-exon-scaffold_214-1491911889:71094..71251Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:71094..71251TCONS_00052447-exon-scaffold_214-1510915933:71094..71251Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:71094..71251TCONS_00052447-exon-scaffold_214-1575043694:71094..71251Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:73846..73924TCONS_00052447-exon-scaffold_214-1491911889:73846..73924Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:73846..73924TCONS_00052447-exon-scaffold_214-1510915933:73846..73924Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:73846..73924TCONS_00052447-exon-scaffold_214-1575043694:73846..73924Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:75053..75126TCONS_00052447-exon-scaffold_214-1491911889:75053..75126Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:75053..75126TCONS_00052447-exon-scaffold_214-1510915933:75053..75126Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:75053..75126TCONS_00052447-exon-scaffold_214-1575043694:75053..75126Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1491911889:84320..85805TCONS_00052447-exon-scaffold_214-1491911889:84320..85805Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1510915933:84320..85805TCONS_00052447-exon-scaffold_214-1510915933:84320..85805Clytia hemisphaericaexon
TCONS_00052447-exon-scaffold_214-1575043694:84320..85805TCONS_00052447-exon-scaffold_214-1575043694:84320..85805Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_214supercontigscaffold_214:67570..85805 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.56681	8.32427	5.77451	4.83826	3.47351	3.58165	4.15083	5.90222	3.3529	3.01085	2.19458	1.81135	1.79303	1.55542	2.39017	2.7965	4.4018	3.93613	1.96734	2.08981	3.34145	3.62077	8.04667	5.78109	3.07296	3.16099	1.61277	1.67916	3.40106	4.31212
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052447 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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