TCONS_00052487 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052487
Unique NameTCONS_00052487
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1320

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052487 ID=TCONS_00052487|Name=TCONS_00052487|organism=Clytia hemisphaerica|type=transcript|length=1320bp
agaTGTCAGAACAAATAAGAAAATTCGGCTTTTGTGAAAGAGCCAATGCC
gaccgaaaaaaaatatacaatatagTATGTCCAACATTGTTGAAAACCAA
ATGTCAAATTGATACTCATCTACTTAGTCAAGCTGTCTACAAAGTCATCA
AATCTCAGCCCAACATCAACGCTGTTTTAAGGTTCGAGGGAGAAGAAATT
TACTTCAAACCTTTAAAAGAGATAGAACAGTATTTTGAAGTGTTGCCAAA
CATTGCTAATTGGAAAGACGTTTGTATAGAATACAATAATAAACATTTGA
GAACAGATTTTGAAACTTATCCACCTTTTAAATTAATGTTGATTCAACCT
TGTAAGGAAGAAGCTGTGGTCATCGCTGTTGCAAGTCATTACTGTATGGA
TGGGACCGGAATTACTGCTATGACTAGTCTTATTTTAGAGACTTATTCAG
AGCTTCAAAAAGATGCTAACTACGAACCAATGAAATATCCAGCTCCAAAA
TCTTTTGAAGATTATCGACTGGAATTTTTTGGTTCCGAAGAAAAGTTTCG
TGAACAACAAAAGCGTTTTAAAGAGTTTCATTTGAACGTTATGGATTCTG
CAAattgttattttgaatttgaagagaATGATCGAGTAGTGTTTACACCA
TATTCAAGCACTGAGATCGAATTTGAGAATTTCAAGAAAGAATGTAAAGC
AAAGGGAATTACTGTTGGAGCTGCTTTATGTGGAGTTCAAGCATGTGCTA
TGGCTGCTTGCatgtttaaaaatcaaaaaactgtCCCTGATGTTGTCAAC
TTGCTGATTGAAATCCCTATAAATTTGCGTGGTCGAATCACTAAAGAAGT
TTCTTGGAAGTGCGCTAACTACATGCCGTCCAATCCTTATATCACCGTCA
AAGTGGGTAGAGGTTCGACATTCTGGGAAACAGCAAGGCAAGTCAAGGAT
ACCTTCAACCATATCTTAAGTGACGAATCAATGATATACTTGTTCGATTT
GTTTACAAAAGATGATTTGTTTGATGAGCCGGAAGAGAAAGAACGACTGA
ATGTTGCAAAGAAGAAAATTGGAGGCTTGGAAAGACATACATGTTTCTCA
AATATGTTAAAGTTTCCAGTACCTTTGGAACACAAAGATTTTACAGTAGA
AGCTTCATATTGTTGTGGTGGGCAATGGATATTGCCAACAACTTCTGTGA
TGGAATTCTTCGTTTATTCCACTAAGAAATTGAATTTAACAATGGTACAT
CGAGATGGAGTACTTAATGTTGGTAGAGCAGAAGAAGTTATGAAATATGT
Tcaatattttgttgaaaatg
Run BLAST on NCBI

transcript from alignment at scaffold_215:40478..54355-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052487 ID=TCONS_00052487|Name=TCONS_00052487|organism=Clytia hemisphaerica|type=transcript|length=13878bp|location=Sequence derived from alignment at scaffold_215:40478..54355- (Clytia hemisphaerica)
AGATGTCAGAACAAATAAGAAAATTCGGCTTTTGTGAAAGAGCCAATGCC GACCGAAAAAAAATATACAATATAGTATGTCCAACATTGTTGAAAACCAA ATGTCAAATTGATACTCATCTACTTAGTCAAGCTGTCTACAAAGTCATCA AATCTCAGCCCAACATCAACGCTGTTTTAAGGTTCGAGGGAGAAGAAATT TACTTCAAACCTTTAAAAGAGATAGAACAGTATTTTGAAGTGTTGCCAAA CATTGCTAATTGGAAAGACGTTTGTATAGAATACAATAATAAACATTTGA GAACAGATTTTGAAACTTATCCACCTTTTAAATTAATGTTGATTCAACCT TGTAAGGAAGAAGCTGTGGTCATCGCTGTTGCAAGTCATTACTGTATGGA TGGGACCGGAATTACTGCTATGACTAGTCTTATTTTAGAGACTTATTCAG AGCTTCAAAAAGATGCTAACTACGAACCAATGAAATATCCAGCTCCAAAA TCTTTTGAAGATTATCGACTGGAATTTTTTGGTTCCGAAGAAAAGTTTCG TGAACAACAAAAGCGTTTTAAAGAGTTTCATTTGAACGTTATGGATTCTG CAAATTGTTATTTTGAATTTGAAGAGAATGATCGAGTAGTGTTTACACCA TATTCAAGCACTGAGATCGAATTTGAGAATTTCAAGAAAGAATGTAAAGC AAAGGGAATTACTGTTGGAGCTGCTTTATGTGGAGTTCAAGCATGTGCTA TGGCTGCTTGCATGTTTAAAAATCAAAAAACTGTCCCTGATGTTGTCAAC TTGCTGATTGAAATCCCTATAAATTTGCGTGGTCGAATCACTAAAGAAGT TTCTTGGAAGTGCGCTAACTACATGCCGTCCAATCCTTATATCACCGTCA AAGTGGGTAGAGGTTCGACATTCTGGGAAACAGCAAGGCAAGTCAAGGAT ACCTTCAACCATATCTTAAGTGACGAATCAATGATATACTTGTTCGATTT GTTTACAAAAGATGATTTGTTTGATGAGCCGGAAGAGAAAGAACGACTGA ATGTTGCAAAGAAGAAAATTGGAGGCTTGGAAAGACATACATGTTTCTCA AATATGTTAAAGTAAGTTAATCTATTGATAAATTATATTTTTATCACTTC AGTCAGAAAGAAAAGACACTTTTTTATTCTGCTACTGGCAGTTTCATGCC ACTTTTGTGACAATCTTCAGGCAACTTTTTATCACTTGACTCTTGTACGA GTTTTATATCGAAGAGTTACCAGGGTCGAATCTTTTTAAAAAGAAAAAGA CCGTTTTGTTATCAGTCCTTTCATAAATGTGAGATTTCTATATCACTGTG ATTGTCTTGGTTCTGAATTGTATTCTTTAAACTTAAAACTTCAAGATCTT CACTTTCCATTCTCACAGGTTTCCAGCACCTTTGGAACACAAAGATTTCA CAGTAGAAGCTTCATATTGTTGTGGTGGGCAATGGATATTGCCAACAACT TCTGTGATGGAATTCTTCGTTTATTCCGCTAAGAAATTGAATTTAACAAT GGTACATCGAGATGGAGTACTTAATGTTGGTAGAGCAGAAGAAGTTATGA AATATGTTCAATATTTTGTTGAAAATGTCATCAAATTTGGTGAAAAAGAT ATCATGGTTTCTGAACTAGCCAGCATGGACTAAAATAGTGGAGTTTGTCG TATAATTATTTACAATATTAGTTGATTAATTTTAATTTCAAAATACTACT GTATAAATATTAAACTAGAAAATATTTAAACAGTGATACGGTCATATATG GCTTATTATTCATACTGTTTAATCGCGATTAAAACCAGAAACTCCCTCTC CTTCTTTTGTAATTTCTTAACCCCTCTTAGTCTTGTGGAATCCTCACCCA CAGATCTGTAAAGCCCGAAGGGCTAGATATGCAACTTTAAGCTTTCTCCA GCAAAAAAAAGTGAAGCAAAAAATTGACTTTTTAAATTTCGTGCCCGCGG ATAGGATCTAGCATTTTAATTGTTTTTGGAGCGCGAGATCAAAAAAAGTA GGCGGCAAACGCCATTTCACATCTCTCAAACCGGTGAAATTGCATATTTT AGTCACGTGACTTTGATAGGAAATCCTTCCAAACCTAGGCTTCACTTTTC GATAAAAGCCGCATATCTAGCCCTTCGGGCTTTACAGATCTGTGTCCTCA CACCCCCCTCGGCCTCTTTAGGCTGTAAAAACTTAACGACTTTGATAATG TGAACCGTTATGCAACGACAGGAAACTTATACCGTATTTTTATAAGTCTC ATTAAATTGTACCATATCTATGGCGCGCCTGAGCGGACAAAAATACTATC TTTCGAAAATACATACTATCTTTCAAAAATACATACTATCTTCCAAAAAT ACATACTGTCTTCCAAATATAGATACTATCTTTCAAAAATACATACTCTC GGGTACCTAATAGCCGGGGGGTTTGGAATAAGCAGGGGGGTTGGAAAAAA TCTCAAAATTTAATAAGCGGGGGGGTTGGAATAAAAANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNACAGCAGAATTAGGGCAAAAGAGGGAACTTTCAAAAAA AAATTTCCCAAAAATCAATAAGCGGGGGGGGGTTGGAATAAGAATGTCCT GGGTGGAAAATGTTCGAAAAGGACGCTGATACAGCAGAATTAGGGCAAAA GAGGGAACTTTCAAAAAAAAATTTCCCAAAAATCAATAAGGGGGGGGGGG GGGGTTGGAATAAGAATGTCCTGGGTGGAAAATTTTCCAAAAATTAATTA GCGGGCCCCCCCGGCTATTAAGTACCCGAGAGTACTATCTTTTAAAAATA CATACTAACTTTCAAAAATATATACTAACCTCTAAAAATACATACTAACG TCAAAAAATACATGCTATCTTTTAAAAAATATGTGCGATCTTCAAAATAC TCAAGCGGTATGTATATTTTTCATTAAGGGCCCATCTACATGATAAAAAT GAGGATGAGTACTTGACCTCGTACGATCAAGCTCACTTTCTTATTGGAGC ATGCGCACTTATAGACACGTGGAAACTTAAGAAAAATCTAGTTTCAAACA AGAAAAGTCTCAGGCTCAGGAATTAGTTGGTTTGTATATTCAACTTCAAC AATTTTACCATCAATAAACCGTGATTTGGCAAAGCATATACCACATCTAG CAATCGACCACTCGTTGGAGTCAAACACTAGACCCACCATTATCACACTT GCACTGTTCCCATTACACTAGTCACTGATAAGAGACTAGGAGTACGCATG TGCTAGCTAGTTAGATCGTATGACCTACAGTACAGAAAGGCCCTTATTTA CAAAAGATGGTTGAAGTTGAAGGACTCGAAATTTGCGAAAAAAGTGACCC TGATTGGGACTGAAATTCCAAAATTTTCTCAAATTTTTTACTTTTTCCCC AAATTTTCCAATAATAGGCACCCTACGAGGGACTGATTTTTCTATTTTGG TGTTTTTGCGACCCTACCTGGGACTCGTGGAGGTTAAAAAAGGTACCCTG ACCAGCGGAGCATCCCCGTAACCCATCTTGCCCTAGTACCCCCCCTGCTC GCAGGAAGAAGAACCTGGGACACACGCTTCACCAAGAGAAATCGCTAGAG AGCTTGAAATCCTTTAGGAAAATCTCCATATCTTTAAAACTACTAAAGCT ATAAGAATGAAACTTTCAGGAAAGCTTCGAAATAGGTTGCTTAAGACGCG TGTAAAATTTCAAGTTTCTATTCTAACTGAAAAAAGTTACGTCAAAGTTT CAATCTTAGGCCTATTTTTTTTGGCACACCCGGTATAGTATTTGTATCTG AAAGATAAGTATTTATTTTTGAAAGTTGGTATGTATTTTGAAAATATAGT ATGTATTTTGAAAAGATACTGTGTATTTTGAAAATATAGTATGTATTTTG AAAAGATAGTATGTATTGTTGAATAATAGTATCTATTTTTGGAAGATAGT ATTTTTGTCCGCTCAGGCGCGCCATACATATCTCTCATCTAAAAGCTAAT ATCAACTAATTTTAATAGAAGAAGGGCAAACTACACGTTATTGCTTTTAT TTTCCCCTCTATCAGAGCCTTTTTATTTTTGTCACTTAATAGAAGTTCGA ATGACATGGCAACTAATTATATGGCTGATTACATTTAGCTTAGAAATGTA AGGGAAGAGCGGGGTGATTAATCCGTAATAGCCCTGCTATAATCACCATG CGAAAAGAGAACAAGAAAATCTTCGAAGAAAATGCTTACGACTTTTTTCA AAAACTAATCGATCTCATAGTTGTGCAATTTGAATATTCTGATTGGTTAG TTGCACCATTCAAACTTCTATTACTTCTATTAAGTGACAAAATTAAAAAG AAACAAAATAAGTAAAAAGGAGGTATTCTCAGGTGATTTTGGATTAATAA CCCCCTCCCCCCCCACATTTCAAAATAGCCCTCACTACGTTCAGGCTATT TTGAAATGTTTTCAATGAACCTCGGGGTTATTAATCCCAAATCACACTCT AAACCATTGCTATTACTAGTACTAACCAATCAAAATATTCGAATTGCACA ACTATTATGAAATCGATTAGTTTTTGATACAGCAAGGCTATTATGGATTA ATCAGCCCGCTCCTCAATTACATGTCTAAGCTAAATGTAATCAGCCATAT AATTACTCGAATTCGATTACATCGAATNTGCTATTACTAGTGCTAACCAA TCAAAATATTCGAATTGCACAACTATTATGAAATCGATTAGTTTATACGG CATACTGGAGAAGTGGGACGTGGGACGGTGGGACGCTCGAGTGGGACGCT CAGGTGGGACGCTCAAGTGGGACGCTCAAGTGGGACGGTAGTGGGACGCT AAGGTGGGACGGTAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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ATTACTTGGTAGCTTTTCGATCAAACATCCAATTTGAATATTATTATTAT TATTCGTTTATCATCCACTATATGATAAAAAAAATGGGTAGGTAGAAAAC CTGGCCCACCTCTCTGGCCTGGGCCATATGGCGTACCCTTGGCCCAATCT TTGGCTCACCTTCAAACATTTTTTCCCCGATTTTATTCTCGGACAACCAG GTTATAATGATATGTGTGCGTCGGGATGCGCTATAATTTCATTATGATTT CATCATAAAGCGCGTTGGCGTTATTGCATCAGCCGTTTTACGACAAACAA TTGGTCAAATCTTCTAAATGTTTTAAGAATCAAACGCTTTTTTTTATAAG AATAGTGTACTTTGGATGAGAGGGTCAATTATTCTTAAGAAAGTGCCAAA ATTGAGGGTGAAATGTTCTTAACGTAGGTCTTGTCTATCTGACCAAGGGA TAAGACCACAGATCTGTAAATCCCGAAGGGCTAGATATTCGGCTTTTATC GAAGAGTGAAGCCTAGGTTTGGAAGGATTTCCTACCAAAGTCACGTGACT AAAATATGCAATTTCACCGGTTTGAGAGATGTGAAATAGCGTTTGCCGCT TACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGAGCG TCCCACCGTCCCACGTCCCACTTCTCCAGTATGCCGTTTATACAGCAGGG CTATTATGGATTAATCAGCCCGCTCCTCAATTACATGTCTAAGCTAAATG TAATCAGCCATATAATTACTCGAATTCGATTACATCGAATGACATGGCAA CTAACCAATCAAAATATTCGAATTGCACAACTATTATTAAAATCGATTAG TTTTTTATACAGCAGGGCTATTATGGATTAATCAGCCCGCTCCTCAATTA CATGTCTAAGCTAAATGTAATCAGCCATATAATTACTTAGTAGACAAGGA TAGAGAGAAGTATACAGACAAGTGAAGTTATTCCGCAACCTTCATCAATT TATTCTCGCAATGTAAGTGTAACTCTTTTTCTTGTAATACTAGGAGCTGG TTTTGTTAAAGATTACCTACTCTCGGGTACCTAATAGCCGGGGGGTTTGG AATAAGCAGGGGGGTTGGAAAAAATCTCAAAATTTAATAAGCGGGGGGGG GTGGAATAAAAATGTCCTGGGTGGAAAATGTTCGAAAAGGACGCTGATAC AGCAGAATTAGGGCAAAAGAGGGAACTTTCAAAAAAAATTTTCCCAAAAA TCAATAAGCGGGGGGGTTGGAATAAGAATGTCCTGGGTGGAANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCGAGAGTAAGTGGATAAAT TTTGGTAGGGATTAAATTTGGCGAATTTTGTTAAAATTCTCAAAATTAAA TCATCGCCAAAATTTCCAAATTCGGCAATTCGCCAAATTTTTCGAAATTT CCCTTTGGCAAATTAAATCCCCGCCAAAATTAAAGGAAAATCAAGTTTTT TTTTACGAGAAATTTCAGAAAACTATTTTTGCCTTTTAAGCCGATCGTGT ATTAACCGTATACATTTTAACAAACTATTTTTACCTTTATAACCAATCTT ATGTTACACGTATTATTTTTTCTATTCTGAGCTTCAACAAAATACCTTAA CAAAAAACACTTTTTTGTCCTTCACCAAATTAAATCCCCGCCAAAAATCA CGTTTTGGTTATTCGCCAAATTAAATCCACGCCAAAATTTATCCACTTAA GGTGGCCATCCACTGGAAATTGAAAAATCGACCTTTTAACTTTAAATGTT GATTACTCAATAACTAAAAATGATATGGGCTTGAAACTTCCAGGTATTAT TATTTATGAGTTAAAGTTAATATTAAAAAAAAAAAATTTAAAAAAAAATT GGAAGACGGGGGGTTTGGTACGACTTTTCAGAAAAATCAAAATAATCTTG TGTCAACGTTTTAGAGAAAACTACAAATACTTGGTTAATGATTTTTGGTA CGTAGAGGCACTTTAGGACAAAGAATGGAATGAGCGAAATTTTTTTTTGA AAAATTCAAAATCCGGGGGTAAAAGCCAAAAAAACAGTTTTTTCAAAATA TGAGATCTGGAATTGTGAAATCTGAAAAATCCTTCGCTCATTCCACAGCC CTCATAGATGTGCAAATACCCTGAAAAAATCAGACCAATCGGACAACTAG ATCCTGAGATTTTTCCGCCACAGTGATTGGGAACCCCCGGATTTGCGTTT TGAGAAATCGTGCTTTAAAACATAAATTGCGGTTAAATGAAAAGATTATA GTTTTCAATAGGGATTTTTTTATGATTTGAGCCTGTAAGGGAGTTTTCTA CATTATTTCAAAGGAAATAAGGATTTAAAACTATTTACAGTGAAAATTTT GGCCAATTTGAGTGACATTTTGATCATTTCCAGNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCATTAAAATAGCACCCAAAAAAGAATAAACAA GCAAACAAAAGTTCTACATACCTTTGGCGCACTACACAACAACCGACCGT GCTCTTAATCAAAAGAAATAACAAGTTACATCATGATTAAATATTCCTTA GAGTTTTACAAACCTCCTTGTATAATGAGAGAACCATAAAACATCATTTA CAGCAACAAATGTGGATGAAACACTCAGCAAAAGTCAGTGAGCTTCATCC TCCAAAATTGTCCAAAAACCATCTTTAAAATTCGAGGGCGGTCATTGTTT ACAAAGTTTGAAAACTGAATATAGGTACACCAAGCGACTTCAAACCTTCT AGAAATGTTTCTAGCGACTTGAAGACGACCCGTAAAGATTTTCAAGCTGT TTGAGCAGCTAGAGAAGGTAGAATTGCTGTTTTACTAACGGGCGGGAAAC AGGGCGTCCATGGGCGAAGCATTAAAAGCTTAAAGGTAGGTATTTTAAAA CCTAAAATTGTCTGCTTATTCTTTACATTTATGAATTGAAATTTTCAGAG GTTGTTGTTCCAGAGAAGTTATACTTGACTTTAAGCCAAAAAAATAAAAA ACCACCAAAAAAGTATCACTATTTTCAAACTCAGTGGATGGCCACCTTAA GGTATTTCGTAGAGAACTAACTTTTGTCAAAGTTCATTCTGCACTCATCT CCCCTTTGATTTATTTACTCTATCTGATCATGAAATTTATTAAGTTCAGA TGGAGGGTTTCGGAAATCCCATGTACACCATTTATTGAACCAAATTTTGT TTTGAATTAGATTCTTTATATTAGACTATTTCGACATTGTCAACATTTTA AAAACCTCTTCTTTGAGTTTGAATTTCTTAAAAGTTGAATTAATGTTGTC AGCGATCATTTCGATCAATTATCCAAAACCACTTTTCAGATTTTCTTTGT TCTCGTTAAAATTAAATTATATAAGGATAGGACAGGTAGAGCCTCGACAA TCCCATCATCCATTAATTCCCCTTAAAACATCCGAACATTGTTTATAGGA GGATTTTGAGTCATTGTTTATTTTTTTATAATTTTCAGATGTCAGAACAA ACAAGAAAATTGGGCTTTGGTGAAAGAGCCCATGCCGATCGAAAGAAAAT ATACAATATAGTAATTCCAACATTATTGAAAACTAGATGTCAAATTGATA CTCATCTACTTGATCAAGCTGTCTACAAAGTCATCAAATCTCAGCCCAAC CTCAGCGCTGTTTTAAGGTTCGAGGGAGAAGATATATACTTCAAACCTTT AAAAGAGATAGAACAGTATTTTGAAGTGTTACCAAAAGATGCTAATTGGA AAGACGTTTGCATAGAATACAATAATAAACATTTGAGAGCAGATTTTGAA ACTTATCCACCTTTTAAATTGATGTTGATTCAACCTTGTAATGAAGAAGC TGTGGTCATAGCTGTTGCAAGTCATTACTGTGTGGATGGGACTGGAATTA CTGCTATAACTAGTCTCATTTTAGAGACTTATTCAGAGCTTCAAAAAGAT GCCAACTACGAACCAATGAAATATCCAGCTCCAAGATCTTTTGAAGATTA TCGACTGGAATTTTTTGGTTCCGAAGAAAAGTTTTGTGAACAACAGAAGC GTTTTAAAGAGTTTCATTTGAACGTTATGGATTCTGCAAATTGTTATTTT GAATTTGAAGAGAATGATCGAGTAGTGTTTACACCATATTCAAGCACTGA GATCGAATTTGAGAATTTCAAGAAAGAATGTAAAGCAAAGGGAATTACTG TTGGAGCTGCTTTATGTGGAGTTCAAGCATGTGCTATGGCTGCTTGCATG TTTAAAAATCAAAAAGATGTCCCTGATGTTGTCAACTTGCTGATTGAAAT CCCTATAAATTTACGTGGTCGAATCACTAAAGAAGTTTCTTGGAAGTGCG CTAACTACATGCCGTCCAATCCTTATATCACCGTCAAAATAGGTAGAAGT TCGACATTCTGGAAAACAGCAAGGCAAGTCAAGGATACCTTCAACCATAT TTTAAGTGACAAATCAATGATATACTTGTTTGATTTGTTTACAAAAGATG ATTTGTTTGATCAGCCGGAGGAGAAAGAACGGCTGAATGTTGCAAAGAAG AAAATTGGAGGCTTGCAAAGACATACATGTTTCTCAAATATGTTAAAGTA AGTTAATAAGTTAATCTATTGATAGATTATATTTTTATCACTTGACTTTT GTACGAGCTATATATCGAAGAGTTACCAGTGTCGAATCTTTTTAAAAAAG ACCGTTTTGTTATCAGTCCTTTCATAAATGTGAGATTTCTATATCACTGC GATTACCTTGGTTCTGAATTGTATTCTTTAAACTTAAGACTTCAAGATCT TCACTTTCCATTCTCACAGGTTTCCAGTACCTTTGGAACACAAAGATTTT ACAGTAGAAGCTTCATATTGTTGTGGTGGGCAATGGATATTGCCAACAAC TTCTGTGATGGAATTCTTCGTTTATTCCACTAAGAAATTGAATTTAACAA TGGTACATCGAGATGGAGTACTTAATGTTGGTAGAGCAGAAGAAGTTATG AAATATGTTCAATATTTTGTTGAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033187XLOC_033187Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052487-exon-scaffold_215-1575043694:53245..54355TCONS_00052487-exon-scaffold_215-1575043694:53245..54355Clytia hemisphaericaexon
TCONS_00052487-exon-scaffold_215-1575043694:40478..40686TCONS_00052487-exon-scaffold_215-1575043694:40478..40686Clytia hemisphaericaexon
TCONS_00052487-exon-scaffold_215-1510915933:53245..54355TCONS_00052487-exon-scaffold_215-1510915933:53245..54355Clytia hemisphaericaexon
TCONS_00052487-exon-scaffold_215-1510915933:40478..40686TCONS_00052487-exon-scaffold_215-1510915933:40478..40686Clytia hemisphaericaexon
TCONS_00052487-exon-scaffold_215-1491911889:53245..54355TCONS_00052487-exon-scaffold_215-1491911889:53245..54355Clytia hemisphaericaexon
TCONS_00052487-exon-scaffold_215-1491911889:40478..40686TCONS_00052487-exon-scaffold_215-1491911889:40478..40686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_215supercontigscaffold_215:40478..54355 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.59178 2.06637 0.932621 0.533324 1.41927 1.34162 3.14932 3.69275 2.43105 2.10735 2.46397 0.894522 0.612613 0.623473 0.983643 2.14534 1.05092 1.06407 0.524127 0.50139 0.252358 0.262287 0.762709 1.16901 0.642367 0.285256 0.153785 0.314296 0.422924 0.25257
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052487 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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