TCONS_00052510 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00052510
Unique Name	TCONS_00052510
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3619

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_217:42790..53904+

transcript sequence

>TCONS_00052510 ID=TCONS_00052510|Name=TCONS_00052510|organism=Clytia hemisphaerica|type=transcript|length=3619bp
tgagatctcaatagaaatttttatccccgctttGGCAAAAGGTGTCAACA
TGACTGTGAGACAGAGATGTTGGGGTGACAGGGGTGTGTAATTCACGGTG
CTCGTATTCGAATAGAGATATCGTTTACATCGGCTACCTGGATGCGTTTT
GCAACTACAGTGACTTGAGAATCTTAGAGAGATTTTGTAAGCTTTAATAA
TAACAAACTTTATCAATAACAAAGATTGCTCTCCCTTTTTTCCTCACCTC
TTCCAAAGTTCTTTCCGAGTTCAAGTGTCCTGTGgatgtaacctgagatc
agattgtgcataccacgctgaagctctaaaggaatgtgtgaaaacataac
aatctgacgaatatgcaatctcaaaatcgtaaggaccgcgttcgtctaaa
aggactaggaatgacaacaaagttgcgtgcattgtgtttatgaatagggt
gccgtatcagttttttgactttctggcgcacaacaagattttcgtcagat
gtataattttcaagcaacttcagaggtttaccgtgcgcgtaagaaaaatt
atgaacagctgttatcagggtAATATAATCTGACTTTCTCACTATGTCAG
TATATAATAGAAAAGAGTTGTTATGTTAAATTCAAAAGTGATAACATTAA
TGGTATTTCCAACTTGTGTAACTTATGGCATGTCTATAAAGGACTCTcat
agacccggtaggattttttagCAAGTGGGTATAAATAACAGAGGATTGGG
GATTGAtgttcccatattttttatgactggggatttcaattattttgttt
tcaagtcaaaaaattcagtggggatggaaaaaaagcataatattttacag
tgaggattggtttatttgattcttttcggtggggacaaaaattgtaggtt
aaattttccaccggggacaatgTTTTcgccaattttttcagtgggacGGG
GTCCCATGGTAATTTATACGTCTAAAGAAACAGTAAATGTAGAATTGTTt
gtcttttttgagaaattgaagGAAAACCTGCTTGataacgtcataattat
ttgaAATCAGGCCTCGGTTGTTCATCCGGTCTGGTACTACTCCGATACCG
TGGCTATTTATTACACTGTTATATAATCGAAAGGCTATCATCCTTGAAAT
GAAAGTAGCAGTTCTTGGAGCAGGGATTATTGGCTCATCAACAGCCTATA
AAATTATTCAACAATTTTCcttttgtgacgtcactttgATATCAGATGAA
TTTTCACCTTCAACCACGAGCGATGGAGCAGCCGGACATTGGGAGCCGTT
TTGGTTGGGTGATACTCCTGTAGATGTGATTAAgAGTTATGCAAAGGAAA
CATTTGCTTATGTcatggaaaatatcaaaaataatccCGATTCTCCTGAT
ATCGGATTTTTTACATGCCACGGATTTCTTCTCAGTAAAGATGAAACGTT
TAAGaaaccattttggtATGACATCCCATCTGATTCCAGGGTATTGAGCA
AAGATGACTTGAAAATGTTTCCATCCGAGGCAAGATCTGGGATGAGTTTC
ACAACAGTGTACACGGAAGGTCGGAGATTGGTTCCGTATTACATCAAACG
ttttcaagagatgGGAGGAAAAGTTTTTCAGAAGTTAATCAGCTCCTTAG
ATGAGGACTTGGTTCACGCAAGTTATTTAACGACAAAAGTATGTTTCCTG
TGAGGGGACAAGTTCTCAAGATTAAAGCACCTTGGATAAAGCAATTTGTA
ACCTATGATGTTGAGAATCAAGACCCAATGTATATCTTACCCAATCAAGA
ATTTGTTGTCGTAGGAGGAACAACACAAAAAGGAGATTATAACGCCAAAA
TTTCGTTGACAGATCGGAAAGAGATTCTGGACAAAGCAACAAAATTTATT
CCAAGTTTAAAAAATGCTAAAGTTGTAGGTGAATGGGTTGGTCTTCGACC
TGCAAGAGAAAAAGGCCCtcgaattgaaattgaaaattttacccTCTCGA
ACAATCGAAACTTAAAGGTTATTCATAATTACGGACATGGAGGATGTGGA
ATGACAATACATTGGGGATGTGCTAATCACGTGGCCAAATTGTTTGATCA
AGTTTGTTCGCAGCAAAATACTCGTCTACAAACTTCCAAGTTATAAGGAT
GACTATGATAACTATGTGACACTCACCACTTTAAAACAAAGTCCATTCTA
CGTCAGTAtcgttctttaaaaacaaacagGCCTCTAGTCCCTTAGTTTGC
TTTCATGAGAGCACTAAAAATGCAAGTTCTTTTCTGAAATATAATAAGGC
AGACCTGGCGGAAACGGGAAGATTGGGAAGACTTTAGCCTCCCAACTTTT
gggcaaatgagatttttttctcaaattactCGAAACGTCCGTCCTGTAAC
GAAAATCAAATGAGCGTATTGAAACAACTTTAGGAGCCACGCGATGCAGT
TTTCTTTAACACGTCCTTGCTGCCCGGGTGAAGGCCCGGGAGGGGGGGAT
ACTCGTATGGTCCGACATACGGTAtgtgtgccgcccttaagggtaggttt
ttcgagaccctcgaaAAGCACTGTAAGAGTGTACTTCTGATAGAGTGTAC
TACAAGGGTCTTATTTTAGCTGGATACATTATataagggtgtgtttgggg
actACTGAATTACAAGTCACATTTTCAGGTGTGTTAGCAAAATAAAGTAT
GCACTCAGGTAAATAAAGGCACGTCCAAATTTACCTTAATTTTTCATcgc
cgtttccacttgtcaaaTCTTCTCACTTTATACATCGCAATAAGCATATT
ACAATGTAGATCACTAGAATGactgtgccataattaattttttacccaaa
aaaaaagatattgggcaaaaacaaaaaaaatgacgATGACGTcaataaaa
cttgttttttttttaataactccTGTTTGGCTGATGGAAGAAATATATAA
TccggaccaaagttgcacattGTTTTACATAAGatgttttgttaaatttt
gctgacgtgAGCAGAAAtaagcaaaatacgaaattttgcaataaagtgtt
gatgtcagaaaaatttcaaattatttttttttcaaataatataaaataga
TCACCTCATAATATATTTGAAATGGTTAATTGGTCAACTAGTTTTATAGC
AAATAGtgtaattataatttttttttttttttgaaaatgcatAAGTAGAT
AAGGATTTGTACaggaatcatttttaagaataaatttcaactttttttac
atCAAGAATTTATTGTGGTataaactaaaaaataaaaaaataatcaaaaa
caaCCCCTTCCCCCAAACCCGGTGGGACAAAAGCCGGCAGAAATATCGTC
CCCAAATTCAAATCCAACTGTTGTCTCcgctgagaaaataaaataatgaa
atccTCACAGCAAAATGTTTAGGTTTTTCGATCCGcactaaattttcaga
tttgaaaacaatggattTCAAATCCCAGCCATTATAATACATTggaatat
caatctccatcgaTTTTCAATACGTTAATTTTACCTCAAACTTgctgaaa
aaatcttaccgggtctgtgagagaAGAGGgtgttcaaaaaatcatcacAA
CGTCAACTTACTTTGTTTT

Run BLAST on NCBI

transcript from alignment at scaffold_217:42790..53904+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00052510 ID=TCONS_00052510|Name=TCONS_00052510|organism=Clytia hemisphaerica|type=transcript|length=11115bp|location=Sequence derived from alignment at scaffold_217:42790..53904+ (Clytia hemisphaerica)
tgagatctcaatagaaatttttatccccgctttGGCAAAAGGTGTCAACA
TGACTGTGAGACAGAGATGTTGGGGTGACAGGGGTGTGTAATTCACGGTG
CTCGTATTCGAATAGAGATATCGTTTACATCGGCTACCTGGATGCGTTTT
GCAACTACAGTGACTTGAGAATCTTAGAGAGATTTTGTAAGCTTTAATAA
TAACAAACTTTATCAATAACAAAGATTGCTCTCCCTTTTTTCCTCACCTC
TTCCAAAGTTCTTTCCGAGTTCAAGTGTCCTGTGgatgtaacctgagatc
agattgtgcataccacgctgaagctctaaaggaatgtgtgaaaacataac
aatctgacgaatatgcaatctcaaaatcgtaaggaccgcgttcgtctaaa
aggactaggaatgacaacaaagttgcgtgcattgtgtttatgaatagggt
gccgtatcagttttttgactttctggcgcacaacaagattttcgtcagat
gtataattttcaagcaacttcagaggtttaccgtgcgcgtaagaaaaatt
atgaacagctgttatcagggtAATATAATCTGACTTTCTCACTATGTCAG
TATATAATAGAAAAGAGTTGTTATGTTAAATTCAAAAGTGATAACATTAA
TGGTATTTCCAACTTGTGTAACTTATGGCATGTCTATAAAGGACTCTcat
agacccggtaggattttttagCAAGTGGGTATAAATAACAGAGGATTGGG
GATTGAtgttcccatattttttatgactggggatttcaattattttgttt
tcaagtcaaaaaattcagtggggatggaaaaaaagcataatattttacag
tgaggattggtttatttgattcttttcggtggggacaaaaattgtaggtt
aaattttccaccggggacaatgTTTTcgccaattttttcagtgggacGGG
GTCCCATGGTAATTTATACGTCTAAAGAAACAGTAAATGTAGAATTGTTt
gtcttttttgagaaattgaagGAAAACCTGCTTGataacgtcataattat
ttgaAATCAGGCCTCGGTTGTTCATCCGGTCTGGTACTACTCCGATACCG
TGGCTATTTATTACACTGTTATATAATCGAAAGGCTATCATCCTTGAAAT
GAAAGTAGCAGTTCTTGGAGCAGGGATTATTGGCTCATCAACAGCCTATA
AAATTATTCAACAATTTTCcttttgtgacgtcactttgATATCAGATGAA
TTTTCACCTTCAACCACGAGCGATGGAGCAGCCGGACATTGGGAGCCGTT
TTGGCTGGGTAATACTCCTGTAAATNTGATGGGGCAGCCGGACATTGGGA
GCCGTTTTGGTTGGGTGATACTCCTGTAGATGTGATTAAGTAAGTTCTTC
TGTTTTATTTTATCTCAAGAACCACCCCTGTTTCAACtgttttgaaactt
tgtgacagCTAGGCCATCAGCATTGACATTATGGTCTAAACAAATTCGTA
GGTAACATCAGGCTTTTCTTTgtcatttttgctgaaaagtataattcata
aaataaaaaagggttcatttcattgaatttttgtttatttttataggAGT
TATGCAAAGGAAACATTTGCTTATGTcatggaaaatatcaaaaataatcc
CGATTCTCCTGATATCGGATTTTTTACATGCCACGGATTTCTTCTCAGTA
AAGATGAAACGTTTAAGGTATTGATGGTATCGAAAAATTGACTTAGACAT
GCgataaataaaacttttactGTCCGTCTCCACAGGTtaaatttcagaga
aagctaAACTGTGGTACTCACAGTGCTGAATTTGCGCTGAGTAgctatcc
cagctggcacacaacgttgtttaaacgtttatctaacgttcacaacgtcc
atatcacgttagatgaacgttaaaacaacgttgtgtgccagctgggatca
tAGTAACTTTATTTTAGGCTATTTGAGATACAAATTTTGAGATCAATGTT
CAAACAACGGAAGATCGTGTTCATCTAAAGTTTTTCTCatgctttttgtt
ttttttagaaaccattttggtATGACATCCCATCTGATTCCAGGGTATTG
AGCAAAGATGACTTGAAAATGTTTCCATCCGAGGCAAGGTACCTTAGCAT
GTGGTGTTACTATTTacatacccccttctcacagacccattggGAACCCT
TCACACtgaaaaaattggtcaaaatatcgtccccagtggaaaactatacc
ctaatttttgtccccgctgaagaTAATCATATAAACaaatccccactgaa
aaatattatgttatttttccatccccattgaattCTCTGGCtggaaaaca
atggaattcaaatccccagccttaaaaaacatgggaatatcaatctctAT
CGAGTTTTAGTATGTTTTTTTACCTGCtcgctgataaaatcccaccgggt
ctgtgagaaggaggtgtattTACAAAATCCATATTACGGTAAATACACAA
CTAGATTTTacactagtcatagctttcactaaatgcccccacataaagat
catgtcatgcacttataaagcttttaatgctttaaagattaaagcattaa
aaataatcagCAATAATTGaatgatttaattattgattgattggttgatt
gatttgttgattgattgattgattgattgattgaggcatttgcttgaaaa
aaaatatattccattaacaaaatacttgaagaattcaggcagcttgataa
tttaataaaatttaaaaatttaagtaaaagctggaaaagcttttcaaaaa
tatatttaaaaaattatggtatcattagctcACTAGCTTACATATTatct
ttcacatctcctgtttgtttttttctcctagtttctttcttacaacaata
tgtGTCATGATTAATTATTATTCATAGACCTTTTCTGGTAATGTCACAgg
catcttagattgtaggcaaaataaatcaacaaggtaccaatcagaaatag
cttgtttatttCATTgcggctgctatatttcaacaattctctattgctac
tttgcctagtAAACAATAgccaagaggatactgcgtataaaatttatcaa
aaagttctgcgccatgtTAAATTGGGTTAAGGCTCGGGCTCCACATGCGT
ACGCTGTGTTTGCACTTCTCAAGATACTTTTTcctgatgcaatcttttct
ccaagctgaaaggattgaggCCATTAAGATGATcacagcgcagacaatga
agagacgtgccttcaggaagctagactttttgaatttataGCTATACTTT
CAcattatggtgtttctgtatgactttctgtgtacctagtctaaccaccg
ttaaatgcctacGGGAAGGTCCATCCtgacttggaaagccagaattggag
ctatttcaccaaaccactggagtgtaagttatttaggctatcacaactgc
atgaaaaagttgaacgtgcgcatcaattaaagttgaacgaatgtaaacaa
acttttttcaggtttttgaaatagatttaccacactgaaaaaaaagtgaa
aacactcgaagtgaggtaaatctattatattttgaagaccaaaagaaaga
gtttgtttacattgatcatgacattcaacattcattcaatcaaccacttt
tggattcaactttacatatgcatacattcaacttttttgtactttgccgg
tatcttgttttactaaattaagaaggactttctcgagttacgaccatatg
atggtatttaaagctcaagaagctctataaacaataaaggtagttattaa
taaaataacagacaaagataaattagagtttgaacaaaaatatcaaatgc
acatttgaaaacttgagcaaatttctttaaagattccggaaaaagaattg
aaatcattgctgaagtaaACTTTTGACTATTCAGTTTTAacgacaagaaa
caaaatttgacatacaaaacactttttccagtcaatgaaaatcagctcat
catcataaccagtctgccattttgtttgttttgatttgcactaCATATAA
TATCggtgatttgcacaagtaatattgtaattcgtgctatatcatacact
gttataatTTGTAtctataacactcgcttcagcttttcaaagcttaatca
aaactaataaattgtaatatataataatggtaatagcatataatagcata
taacgtaatatgaaaatatttgtcccggaaaaaaaccgagcatttacgga
agagactaactacggggatgcttgtgcgacaaaacacaaacaacaaaatt
tgaagattccagtccaatatctatgcgtgaagctatgagtgcctcctcgt
cgctacgctcctgcgggggcaaaaattCCCTCAAAATATACTCTTAAAAC
GATGGTAAACTTTCTTCATTCTCATTTCGTTTTAACTACAGTTAACcctc
tccttaactcaaactgAAAGGGGAAGTCTAACTTGTTTGAAAGACAGAAG
GATTCGAACTATAGAGAATATTTTACTACACTTCTCAACTGAATGGGACT
GGAGAATCATTTCGAAtcatagaaaaattgaaaaagttcttTAATTGCCA
TGTTTTGAATTAAACATCGCATTGTACAggtttgatttgtttttgtttgt
gatTGTTTGTGGTGCTTTATTATGATTTCCTTTTGTGTTACTCAAATTTT
ACCTTCTTAAAATTATCCCTCAGATCTGGGATGAGTTTCACAACAGTGTA
CACGGAAGGTCGGAGATTGGTTCCGTATTACATCAAACGGTACGCTTATA
GTGTCTTGCTTACACATTTGTACCTTTGACATTGAAGGAACTCCTaccca
taaaaaatgaaattatgtCACATTGGAAAAATACTTCGTCCTATTGGAAA
AACATTCGACGAGAATCATTTaagataaataaaatataattttgaatcTG
TAGACAAAAAAATCCCATCCACATTGGCTTGGGTGAAGTGCTGAAGTTTT
CACAGGGTTACTAATAGAGTGTTTTCGAAACCACGACGAGAACGGCAACG
GCGACGTGATAGTGGTTTCGCCGTCGTCGTTGTCGTCGCGATTTCGGAAA
CTCCTAATCAAGCCATAGTACGATAGTCCCTACGATAGAGGTGTCGTAAT
TTCTGTAAAAAAGTTTTACTGGACCGACATCTTTTAGCTATATTTTAACC
TATTTTTAAGGaacaatctttaaaaatattggACAAATTAAGTACAGTCG
CaagataaaaaatgtaaaaatttgttttgaaaatatagttTTTGATATAA
ATCTTGGCCTCAATTCTAACCATttgttgtttttagttttcaagagatgG
GAGGAAAAGTTTTTCAGAAGTTAATCAGCTCCTTAGATGAGGTAATAACT
AACCAAAAGGTTCAATGCTGACGTTCTTCGGGGATATTTGGGGGTATTTA
GGATATGTCTTGAGCTTACCCAAGAGTTTTCACGTTATCTGGTAGagagt
aaataaataaatatcacACAACGAAGTTTCTTTCCCGAGAGCTTTCTCTT
TCTTCAAAACTATTCTTCCTAAAAGTTTCCCTTTTAAGGCTTTCTGGTCC
AAATGTTACTGTATACCTATTACTGTATATATCTTTAGTTGCCTGGTGAT
TTTGACGTTGTCATTAATTGTACAGGACTTGGTTCACGCAAGTTATTTAA
CGACAAAAGTATGTTTCCTGTGAGGGGACAAGTTCTCAAGGTAAATCAAA
CTGAGCCTATTGGTTTTGTCCGATAGCTTTACACTGTAAAAGGCAGGCAC
GGGTAAAAAATTTTGTATCCAGAGCCTCTTATAacactttttttagattt
tgctgATGAACTTTGATATTAAGCGCTATCTCAGAACTATCAAAATGCGA
GAGAAGGGAAAAAGCaatcaaagatttttcaaagtcaaCCTTGATCTTTT
TAATTAAAGgcgttttatttttacataagtgtttccgtttcatatcagaa
NGCTTTAATTAAAggcgtttttttatttttacataagtgtttccgtttca
tatcaggacagtgtctgcctttagttacattatgctgatataagcaaaaa
agatatttttcttttcctttttctgaccaatcttgcttcacatccgtgtc
aatctaatgtgaaaaagctagtaaatcaaaattgatgagtaagcaaacga
tatcactcttatttaaaaataaaacctttaattaacTTAACAGATTAAAG
CACCTTGGATAAAGCAATTTGTAACCTATGATGTTGAGAATCAAGACCCA
ATGTATATCTTACCCAAGTAAGTTTTCATACTTCCCTTCCCATCATTTTA
TCCCTCTAAATAATCTTGCATTGTAAGACACATGCGTATTTAGACTATGC
TGTAGCCTAAAACAAATCACCTTCTAAGAAGCAatcccaaagccgaagaa
aattcgtaAACGGGTTTTTTGCCAAAGAAAAGAGTTTACGgccggtagag
tttgccagtcttcgaaactctcccgccgattttttcccatataccgccat
attttcccgcctttactatcactgtaaaggacgataacatcgtctaatgT
GTAATTTGCCGTTCTTTAAACCGTATATAGTTAATTCCCATGATAagcaa
agaggaatgaatccgtcgtgaaaatttaaagtctgttcacgataagtgtg
cactcttttttcttttacctataacttttgaaggaattcttcaatcttta
taaatttggtatcgttagagagatatttgtgactggaacaatttgaaata
aaaaaaactataaatgaagatgaaaataaagaagaaaacaatgaagatct
tgtagaaaattgctataactttcatattcactggagagattctttgatct
taggtgggcatcactgtgaaaaaatttcactaaaatatttattcaatata
aagttatgatgcaaagttaataagtgatcgACCTcaaaaaacatcagaaa
acagcagaaaacaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGGGG
TGAATTTCACCCcggctacgtgtaaccaccGCCTATTTATGTTTTTCCAA
AGTGAGTTCTTAGTTTTATGTTTAATACAGTAATGCAAACTACAAATTTT
TCTGTTGTGTCTTTTATGGTGATTTTTCCATACCTGGTCTTACTTTCGCC
TTCCTCACGAATattgaaaataaccaaaatattGTCATCAAAGTTAAGGT
TTACAGGCAGTACCAGATTGATCAAAGTAtcttaaaaattatcaaaacaa
gaTAACTACtttaaattctacttttatAAACTTTTAGTCAAGAATTTGTT
GTCGTAGGAGGAACAACACAAAAAGGAGATTATAACGCCAAAATTTCGTT
GACAGATCGGAAAGAGATTCTGGACAAAGCAACAAAATTTATTCCAAGTT
TAAAAGTAAGTTTGGTAAAACTCACGGTCTTCTAAAATAGTGTTAACACG
TTAAGCGCAATACAGATTGTACGACTTTTGTATTGTAGtctatttttttt
aagataagATGGAGCTTTTCTATTGTCAGAATTAGAACAAACTTCACTGC
TAGCCAATAAATTGGCTTGCTTCGATGCAGGTTTCTCCCGGGAGGCGGGT
ACTAGGTTTTCGGGATGACAggtatgtgccgcccgacttttggTGGTCGG
GAAATTATTGGGACAAAAACGGGACTTAAATGAAAAAACTcgaatttttg
tgaattttgtgaCCCTAGTTAGGTCTATTTTACTATAAAATAGGCTTTTG
AGGGTCCCAATATAGAGTTTGAACTGTTTTTGCAACCCTTAGGGGGGGAA
TGGAATTAGATTATGTGATTTTTACTACCCTTAGTGGGATTTTGAAGATC
CAAaacggcacatacccgtaccctccTTTTGCCTAGGTAACCCCGGGGGG
TTTCTCAAACCCTGTATTGAATTGGAATTTTGTAATTGGAAAAATTCTAC
GCCAGAAAGCCTCATTGCATTTATTTCATTTCTAGCGTTAACATTAACAC
TAGGCACTAATTACGAAAGGCTCGAATAACCGAAAGCTTCAAATCATACC
CTGTTTTTTGAATAATctgaatctttttttaaacgtattttttttgtttg
tatcAGAATGCTAAAGTTGTAGGTGAATGGGTTGGTCTTCGACCTGCAAG
AGAAAAAGGCCCtcgaattgaaattgaaaattttacccTCTCGAACAATC
GAAACTTAAAGGTAAGTTAAATttattaataaaaaataatgtgTTTCTCA
ACAGCCTGGAATTGGAAAACTTAACGCCACCTTCGTCCTTTTCCAATGAC
ATACCTTAAGTGTATCGATTTTggtggggattaaatttgacGAATTTGGC
AGTTTTTGGtaaaatccgccaaattgaatacactccaaaatttttaaaat
gcaaatttaaaaaatagattttaaattcgattttaaatacatgtttcttt
ttgacataatcagcctcatggaaggctggattggaaggttctttaaaaaa
accgaatcaaaaaatctttttttctcattctcagcctcagcatgtttctt
agatgtttcttagtttttaggcattctaagcctcatgtttcttaaaagtc
tgtttcttaaaaaaaatgcatACCTCTATAGATCTACTTTCTATAATACT
ATGAGAAACTCTTTTCAGAGAATGAACAGAAGCCTACCGTATAGCGTTAT
TAGCTTGTGAAGTGTGATGTCATTTTACTTAGACGAtatatcgtctacac
aagatcactaaaaaagggaatagtttaggaggcggGAAACATTTTTGTGA
ACGGGTAGTTAGCCCGTGGTGGAGTAAGCAGTAGCGGAGATGCtagcttt
ttttttcaaactctaCTGCCACtatttttttcccgtaaaccgccctgacg
ccctaacaTTATTTCCCGTGTTTACTTGACCCTCTAAAACCCGATTCCTT
TCGTTGCAGCTTTTGGGCTTTAATAGTATATATACCCATCTAAAGAGAGT
TGAAgaacaaaattttcagtttgaccTCATTCTATACTGACTTCACTTTA
ATCTTTCATGCAGGTTATTCATAATTACGGACATGGAGGATGTGGAATGA
CAATACATTGGGGATGTGCTAATCACGTGGCCAAATTGTTTGATCAAGTT
TGTTCGCAGCAAAATACTCGTCTACAAACTTCCAAGTTATAAGGATGACT
ATGATAACTATGTGACACTCACCACTTTAAAACAAAGTCCATTCTACGTC
AGTAtcgttctttaaaaacaaacagGCCTCTAGTCCCTTAGTTTGCTTTC
ATGAGAGCACTAAAAATGCAAGTTCTTTTCTGAAATATAATAAGGCAGAC
CTGGCGGAAACGGGAAGATTGGGAAGACTTTAGCCTCCCAACTTTTgggc
aaatgagatttttttctcaaattactCGAAACGTCCGTCCTGTAACGAAA
ATCAAATGAGCGTATTGAAACAACTTTAGGAGCCACGCGATGCAGTTTTC
TTTAACACGTCCTTGCTGCCCGGGTGAAGGCCCGGGAGGGGGGGATACTC
GTATGGTCCGACATACGGTAtgtgtgccgcccttaagggtaggtttttcg
agaccctcgaaAAGCACTGTAAGAGTGTACTTCTGATAGAGTGTACTACA
AGGGTCTTATTTTAGCTGGATACATTATataagggtgtgtttggggactA
CTGAATTACAAGTCACATTTTCAGGTGTGTTAGCAAAATAAAGTATGCAC
TCAGGTAAATAAAGGCACGTCCAAATTTACCTTAATTTTTCATcgccgtt
tccacttgtcaaaTCTTCTCACTTTATACATCGCAATAAGCATATTACAA
TGTAGATCACTAGAATGactgtgccataattaattttttacccaaaaaaa
aagatattgggcaaaaacaaaaaaaatgacgATGACGTcaataaaacttg
ttttttttttaataactccTGTTTGGCTGATGGAAGAAATATATAATccg
gaccaaagttgcacattGTTTTACATAAGatgttttgttaaattttgctg
acgtgAGCAGAAAtaagcaaaatacgaaattttgcaataaagtgttgatg
tcagaaaaatttcaaattatttttttttcaaataatataaaatagaTCAC
CTCATAATATATTTGAAATGGTTAATTGGTCAACTAGTTTTATAGCAAAT
AGtgtaattataatttttttttttttttgaaaatgcatAAGTAGATAAGG
ATTTGTACaggaatcatttttaagaataaatttcaactttttttacatCA
AGAATTTATTGTGGTataaactaaaaaataaaaaaataatcaaaaacaaC
CCCTTCCCCCAAACCCGGTGGGACAAAAGCCGGCAGAAATATCGTCCCCA
AATTCAAATCCAACTGTTGTCTCcgctgagaaaataaaataatgaaatcc
TCACAGCAAAATGTTTAGGTTTTTCGATCCGcactaaattttcagatttg
aaaacaatggattTCAAATCCCAGCCATTATAATACATTggaatatcaat
ctccatcgaTTTTCAATACGTTAATTTTACCTCAAACTTgctgaaaaaat
cttaccgggtctgtgagagaAGAGGgtgttcaaaaaatcatcacAACGTC
AACTTACTTTGTTTT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033204	XLOC_033204	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_217	supercontig	scaffold_217:42790..53904 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.222569	0	0	0	0	0	0	0	0	0.189894	0.106969	0.152852	0	5.66804e-06	0	0

Blast

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BLAST of TCONS_00052510 vs. Swiss-Prot (Human)
Match: OXDD (D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.519e-51
Identity = 66/163 (40.49%), Postives = 91/163 (55.83%), Query Frame = 2

Query: 1655 GLGSRKLFNDKSMFPVRGQVLKIKAPWIKQFVTYDVENQDPMYILPNQEFVVVGGTTQKGDYNAKISLTDRKEILDKATKFIPSLKNAKVVGEWVGLRPAREKGPRIEIENFTLSNNRNLKVIHNYGHGGCGMTIHWGCANHVAKLFDQVCSQQNTRLQTSKL 2143
            GLGSR+L  D  +FPVRGQVL+++APW++ F+    +     YI P    V +GGT QKGD+N      + +EIL +     PSL  A  + E VGLRP R  G R++ E       R L V+H+YGHG  G+++HWG A   A+L  +      T +  S L
Sbjct:  184 GLGSRQLAGDSKIFPVRGQVLQVQAPWVEHFIR---DGSGLTYIYPGTSHVTLGGTRQKGDWNLSPDAENSREILSRCCALEPSLHGACNIREKVGLRPYR-PGVRLQTELLARDGQR-LPVVHHYGHGSGGISVHWGTALEAARLVSECVHALRTPIPKSNL 341

HSP 2 Score: 98.9821 bits (245), Expect = 2.519e-51
Identity = 63/176 (35.80%), Postives = 96/176 (54.55%), Query Frame = 3

Query: 1152 KVAVLGAGIIGSSTAYKIIQQFSFCDVTLISDEFSPSTTSDGAAGHWEPFWLGDTPVDVIKSYAKETFAYVMENIKNNPDSPDIGFFTCHGF-LLSKDETFKKPFWYDIPSDSRVLSKDDLKMFPSEARSGMSFTTVYTEGRRLVPYYIKRFQEMGGKVFQKLISSLDEDLVHASY 1676
            ++AV+GAG++G STA  I +    C VT+ISD+F+P TTSD AAG   P    DTP+   K + +ETF ++   I N+ ++ D G     G+ +     T + PFW D+    R +++ +LK FP     G +FTT+  E    +P+  KR +  GG    + I  L E  +H S+
Sbjct:    5 RIAVVGAGVVGLSTAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIPHTYPDTPIHTQKQWFRETFNHLFA-IANSAEAGDAGVHLVSGWQIFQSTPTEEVPFWADVVLGFRKMTEAELKKFPQYV-FGQAFTTLKCECPAYLPWLEKRIKGSGGWTLTRRIEDLWE--LHPSF 176

The following BLAST results are available for this feature:

BLAST of TCONS_00052510 vs. Swiss-Prot (Human)

BLAST of TCONS_00052510 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OXDD	2.519e-51	40.49	D-aspartate oxidase OS=Homo sapiens GN=DDO PE=2 SV...	[more]

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TCONS_00052510 (transcript) - C. hemisphaerica