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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052693 ID=TCONS_00052693|Name=TCONS_00052693|organism=Clytia hemisphaerica|type=transcript|length=1037bp
atgggAAAAACTGTCAGAtaacttttcaaacaaaatttcataacaaaatt
taaaaaaagaatgagtTGTTAAAGCTCTCTACTGAAGATAGCCTTAAAGT
CAGTCTTATCATTGTATGTGTGTTGTGTGTTTTAGatcatcatttttttc
cttttgttttgaaaattttcaaaactccaTTCAAAAACACGTAACTAATA
AGATGACAAGCTCTACTAAATAGAAAGAAAGCAGTGGCTTAACAGCCTCT
CATCAAGTGATTAAATGCACAATTACATTAGCTTATAACTATtagtaaaa
aagttttttatgtaCATAGACGGACATACACTTTTTTCTGATATCTTGTT
ACTATTAAACGATCTTTttaattcaatatcaaaagagACATAAAAATACA
ACTCTCAGGTGCTACTCAAAACAAAGTCTACAAGACATAATCTCCAAAAC
ATTCCTTTGAAACAAAACTATTTGACAAATTCCAAGACTTCTTTTATGAA
TACAaagaaagtttgttttgaatagTAATAAAAGAGAGAAATAATACTTA
AGACACATCATTGaatttgagaaaactgggaagtacattagtgcaggatc
cgttgattcattacctaTAAGTAATATGCACTTGATTTCACACATATAGA
ATTTAGTTACACAGGTTATAAGAGACAGGATCCCCTCCCTCCAAACCATA
CCTTTATAGCCAGTTCAATGAAGCGTTTGGTTAAAATACATGACGTTATT
GAAACCAAACCAGTGCTTTTAAAAAGCACAAGCAAAAACTTTACCTTGAA
TCAAAACATATTCATTTGTAAATAAATATcacaaccaaaaaaatgtacaa
aactttttaatcataaaaCAGCCTTCTTTCTCATAGCATTTTAATAGCTC
AACAGTCAAATAACAGTCGCAACcaatataattttgaaatttggaaNCAT
CCAGATTTGTTGTATCCACTGTAGTTTCTGTTACACTTGCCATCACTCCT
TCTCATgtttttaaagactttattttatttactaaaa Run BLAST on NCBI transcript from alignment at scaffold_218:197942..198978 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052693 ID=TCONS_00052693|Name=TCONS_00052693|organism=Clytia hemisphaerica|type=transcript|length=1037bp|location=Sequence derived from alignment at scaffold_218:197942..198978 (Clytia hemisphaerica)
ttttagtaaataaaataaagtctttaaaaacATGAGAAGGAGTGATGGCA
AGTGTAACAGAAACTACAGTGGATACAACAAATCTGGATGNttccaaatt
tcaaaattatattgGTTGCGACTGTTATTTGACTGTTGAGCTATTAAAAT
GCTATGAGAAAGAAGGCTGttttatgattaaaaagttttgtacatttttt
tggttgtgATATTTATTTACAAATGAATATGTTTTGATTCAAGGTAAAGT
TTTTGCTTGTGCTTTTTAAAAGCACTGGTTTGGTTTCAATAACGTCATGT
ATTTTAACCAAACGCTTCATTGAACTGGCTATAAAGGTATGGTTTGGAGG
GAGGGGATCCTGTCTCTTATAACCTGTGTAACTAAATTCTATATGTGTGA
AATCAAGTGCATATTACTTAtaggtaatgaatcaacggatcctgcactaa
tgtacttcccagttttctcaaattCAATGATGTGTCTTAAGTATTATTTC
TCTCTTTTATTActattcaaaacaaactttcttTGTATTCATAAAAGAAG
TCTTGGAATTTGTCAAATAGTTTTGTTTCAAAGGAATGTTTTGGAGATTA
TGTCTTGTAGACTTTGTTTTGAGTAGCACCTGAGAGTTGTATTTTTATGT
ctcttttgatattgaattaaAAAGATCGTTTAATAGTAACAAGATATCAG
AAAAAAGTGTATGTCCGTCTATGtacataaaaaacttttttactaATAGT
TATAAGCTAATGTAATTGTGCATTTAATCACTTGATGAGAGGCTGTTAAG
CCACTGCTTTCTTTCTATTTAGTAGAGCTTGTCATCTTATTAGTTACGTG
TTTTTGAAtggagttttgaaaattttcaaaacaaaaggaaaaaaatgatg
atCTAAAACACACAACACACATACAATGATAAGACTGACTTTAAGGCTAT
CTTCAGTAGAGAGCTTTAACAactcattctttttttaaattttgttatga
aattttgtttgaaaagttaTCTGACAGTTTTTcccat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052693-exon-scaffold_218-1491911889:197942..198978 | TCONS_00052693-exon-scaffold_218-1491911889:197942..198978 | Clytia hemisphaerica | exon |
| TCONS_00052693-exon-scaffold_218-1510915933:197942..198978 | TCONS_00052693-exon-scaffold_218-1510915933:197942..198978 | Clytia hemisphaerica | exon |
| TCONS_00052693-exon-scaffold_218-1575043694:197942..198978 | TCONS_00052693-exon-scaffold_218-1575043694:197942..198978 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_218 | supercontig | scaffold_218:197942..198978 . |
Blast
The following BLAST results are available for this feature:
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