TCONS_00052818 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052818
Unique NameTCONS_00052818
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4237

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052818 ID=TCONS_00052818|Name=TCONS_00052818|organism=Clytia hemisphaerica|type=transcript|length=4237bp
taaaaatagacaaaaaataaATGAGAATTAAAATAATAAACGACGATTTC
ATCAAagataaaattgaagaaaaaataataaagattGAGTAAGAAAGTTA
GAAAGAGAGAGAGACCGCTTCAATCAGATATCTCTAAGCGCAAAAATATA
TTCTTCTGTTCATTCATAATATGTCATCTCATATATGGTCTACATGGTAA
CtaagataaataaattttttcgaaataatttttttcattttgtatgtTCT
TTAGAGAGTGATAAAATGTCAATTATTCACAGTTAATATTTTGTTTTCGC
CGAACCATTAATCAGACATTACTCAAGACAAAAATCTATCGTTTAACTTG
ATCTCCGTAGTTGGGAAAGTAACAGGATGGAGAAAAACTTACGGCAGACG
ACATACGATGACGATTTCGACATGTTTGGAGAGGTTGTGAACGACGTggc
tcaaagaaaacaaaacgaAGAAAACTTCTTCAATGTTGAAACTAAACCAA
ACACTCCTCCAACAACAAATCTACTTATGGAAGTTAATTCAAGCGAAAGC
CCAGCTGTATCAAGGCAAAGCGTATATCTTGACGGCACTTTGACGCCAAG
TGCCGCCAGAGCTCGAACAGGGTCCTCAAGATCCGCCTCGAACTTATCCA
TGGACGGCTTTGAAGGAATAGAGACAGAACGAGAACACAATTTTTCGTAT
GATATCAGAGACTCGTTTGATGATATTGAAGTTCAAAGCAGACTAAGTCG
TCGAACAGATTCGGATCCTGTAGTTGAGCGGTTTTATAACGATTCGATTA
TTGAAGAAACAGTAGGAGAAAAATCCATGGAAAAGAGGCTATCAACACCA
GATGCAGTTATAAGCCGGCGGAATACTCCAAGTAATGAGACAATCGAGCA
TACAGAAAATAACCACGACAGAGAAATTGCAACTccaacttctgaataca
gtccAAGGAATAATTTCGACGAACCCCATAACAAAGATACGCTCGCCATC
AACAAAGGAGATTATATTTCAGTGGAAATAAAGAAGAGTGAAACACCATC
ATTACAAGAGAAATCTGATAGCCCCAGAAATGATTATGACAACATTGAGA
ATAATGAAAAAGACAATAAATTGAATCGGTCTTCATCAGTTGAAAGCCCG
AGAGAAAATGTAGATAAAGCCGAGGACACTACGAGCGACAATAATGATGA
TAACGACCATGAAACCGAAAAAGAGTCCAAGTGTCACGAGCAAACCTATG
AAAGCCCGAGAGAAAATGTAGATAAAGGCGAAGACACTACGAGCGACAAT
AATGATAACGACGATGAAACCGAAAACAAGTCCGAGAGCCACGAGCAATC
TTATGATAAAACAGACCAGAGTGATTTCAAAAGCATACTCCATTACAAAG
ATTCTCTCGaagctgaaaatgaaaaatcaactgAGAAGAAGACCGAGAAT
TCCACCGATAAGGACTATGAACAAAACGATAATCAAACTGAGGAGCGAGA
AATATTGGAGGATGAAAACGAGAGTTTGACCGAAAACGAGGGTGCAGACG
AAGACGAAAATATCGAATCAGAAACCACTCCTAGAGATGAGGACTCTCGG
GAAAAGGAAGACGATAATACCGAACGAGGAGAAATTTATCGAAACATCAA
ggaagtaaacaatgattttaACGAAgtcaaaaaagggaaaattaaaTTAT
CTAGTGGAAAAGAAATCAACGAAAAATTCGAAGAGGGAGATTCAGGGAAC
GAGTCTAATGCTTCAAAAGAGAGTTCCATTGCTATGACGACCGAAGAAaa
caaattaataaaaaatgaagatggtGAAAATGAGCAGTCGAAAAGTGAAA
ACTTAGTGAATGGTATACCCCaggagaaaaaagagaaaaataatgatGAT
TTGGATGAAGATAAGGAGGGTTCAGAAGGGAAACCCGAAAAATTGACTCT
GTTGGAAGATATGATGAGAGATTTACAGAGAGAAATTGATGAGGAAAAAG
AAGAgcctcaaaagaaaaagaaaactgtGATTTTCAAGAGGGACGGTGAT
ACGTATGATGAAAAAGGAGATCGAAGATATGATATGAGTGCCCTGGAGAT
GGTCAGTGAGGATGAAAATGAATTCGTTAATCTTCAGGAAGTACAACAAG
CTCGGATCGAGTTAAATGATTATGCAAAGGACCTTGATAATTTCAATCAT
ATCATCAATGAGTTAGAGAAAACACCTGAAGAGAAAAGAATGGAATCAAA
TCGAAGTTTGACATTCGATTTGGGTGACTTGGGAATCGATGattttgaag
atgaagaaagaGAAGGTAGTACTAATCGGAAAACACCGAAAAAAGcgaaa
aagataaagaaaaagaagaagaaaactgATGTTGTTTACAGCAAAGTCTG
CCAAAAATGTCGAAATCCAATCTTCAAGAAAGATTCGTATTTAGAactga
atgaaattttcagtgaCAGTGTTTTATGTAAAAAATGTTTGGCTGGTAAA
tcgaataataaagaaaaagagaagAAGATCGAAAAGTCTCCGGCGAAACA
TGATATTGAGCGGATTAAAGCCGAAGTTAAGCCAGCTTTAGACTCTCGGC
TGGAGAAAAGTGAAAATACTGCATTGCAGAAATGGTTGGAGAAAAAGAGT
AAAGAGGAACGAGTGAGAAAAAGGCAAGAGCGGAGAGAACGGAAAGCTAA
AGCGAAAGAAATAAAACAGAAGAAACGCGAAGAGTCGGAAAAGCAGAAAA
TGGTGAAACAAAAAGTCGATGATTGGgaggaaaaaaagaagaaagaagct
aaagaaaacaaaaagaggGAGAAAATTTCTTTGCTACTCAACAGTGATAA
ATCGAGACCTATTTTACATTCACAGAATAGAGGATCGAACAGCTCTTATA
TGAGTACGTCGGCTACGGACAGTCCAAGAAGTAATGCAACGTTTGAAGTC
ACCGAGGAGAATTCGTTTGAAAAGTTTCGTGAAGACTTTTTGCAGCATTC
TGAAGCAACTCCACCATCGGAATTGACCTATGGGTCTGTCAAAGATTTCG
TTCAATCCGTCATTCTCAGTGCTCTCTTAGAGATCGAAAAAGAACAATCG
CATCCAAAACCACTAACCATCAAGCGACCAAAATCGCACGCACCTGCGCT
CCGAAACCAACAACGTCACCTGCAACCCAGACCACCTCCTCCCAAAAGTG
CGCACGCGCGGAAATCACAAAATTTACCATTAAGAAGAATTAAAACTAAA
GAACATACTCAATCCAACAAAAACGTCACTCCAAAAGGGTTAATGCGAGC
GAAAACCTATGACGAGTGgatgtttgataaaaaagttcaGCGCGGCGTGA
aagaaaaggagaaagaaatCAACGAACATTACGATTTACTGCAACAAAAG
TTAATCGAACTGGAGAAAGACCGTAGGAATGCTTTATATCATCTACGAGA
GTCTTCCATGATAGAATATCATCATAAACAGTTACCATTACTTTCCAAAC
GACTGGAGCCACAAGGAAGTGAATCGTCGTCTATAAAGTCGTACCTTTCC
AATTTATGATATGTTATGATACATTGGAATTGGAAGGATCTGTAGGGTTG
CTTCATGTTGCTGTATATACTACGGCCTACTATAAAACTACATAATATGG
ACGAATCGTCtaaaataattaatttgaatttttttaatatctAGATTTAA
TTTTATCAATATGTGTTATAACGTCGTTCTCCGTTAGGCAAACCTTTTTA
ACAAACACTTCAAAGACTTCTTTTTGGGTACCACTTTAAAGTTGTGCTCA
CTGGATGCGAAACAGAACATTGTCAAATTCCAGACTGATATCACAGATGT
AATGATTATTtccatttttataaatttgcaataaaggaGAGGTTTTCTGA
TGCCAGAACAGATAACAAGATTGCATTTAATTGAGCCTAATCTAACCATG
TTCAATAAGGAAAGTATGGACATTTTAAGAATCCCGTAATTTTTTATTGC
TTCAATCGTAAACGCGAACATTAAAACCTTCCTAAAATTTGTTTGGTAGT
AAATATTGAAAGTCAATCTTACCTTTTGATCTGATTTCTCATTACGTTTT
TGTCCACATTTCTACCAATAGCATTCAATCTTGTTAACTCCAGCACCTTT
TgttaatcatttttttattctgTTAATCTTATTATTTaactaaaaaggaa
aatataattttcaaaacattttataGCAATACCTTGC
Run BLAST on NCBI

protein sequence of TCONS_00052818-protein

>TCONS_00052818-protein ID=TCONS_00052818-protein|Name=TCONS_00052818-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1060bp
MEKNLRQTTYDDDFDMFGEVVNDVAQRKQNEENFFNVETKPNTPPTTNLL
MEVNSSESPAVSRQSVYLDGTLTPSAARARTGSSRSASNLSMDGFEGIET
EREHNFSYDIRDSFDDIEVQSRLSRRTDSDPVVERFYNDSIIEETVGEKS
MEKRLSTPDAVISRRNTPSNETIEHTENNHDREIATPTSEYSPRNNFDEP
HNKDTLAINKGDYISVEIKKSETPSLQEKSDSPRNDYDNIENNEKDNKLN
RSSSVESPRENVDKAEDTTSDNNDDNDHETEKESKCHEQTYESPRENVDK
GEDTTSDNNDNDDETENKSESHEQSYDKTDQSDFKSILHYKDSLEAENEK
STEKKTENSTDKDYEQNDNQTEEREILEDENESLTENEGADEDENIESET
TPRDEDSREKEDDNTERGEIYRNIKEVNNDFNEVKKGKIKLSSGKEINEK
FEEGDSGNESNASKESSIAMTTEENKLIKNEDGENEQSKSENLVNGIPQE
KKEKNNDDLDEDKEGSEGKPEKLTLLEDMMRDLQREIDEEKEEPQKKKKT
VIFKRDGDTYDEKGDRRYDMSALEMVSEDENEFVNLQEVQQARIELNDYA
KDLDNFNHIINELEKTPEEKRMESNRSLTFDLGDLGIDDFEDEEREGSTN
RKTPKKAKKIKKKKKKTDVVYSKVCQKCRNPIFKKDSYLELNEIFSDSVL
CKKCLAGKSNNKEKEKKIEKSPAKHDIERIKAEVKPALDSRLEKSENTAL
QKWLEKKSKEERVRKRQERRERKAKAKEIKQKKREESEKQKMVKQKVDDW
EEKKKKEAKENKKREKISLLLNSDKSRPILHSQNRGSNSSYMSTSATDSP
RSNATFEVTEENSFEKFREDFLQHSEATPPSELTYGSVKDFVQSVILSAL
LEIEKEQSHPKPLTIKRPKSHAPALRNQQRHLQPRPPPPKSAHARKSQNL
PLRRIKTKEHTQSNKNVTPKGLMRAKTYDEWMFDKKVQRGVKEKEKEINE
HYDLLQQKLIELEKDRRNALYHLRESSMIEYHHKQLPLLSKRLEPQGSES
SSIKSYLSNL
Run BLAST on NCBI

transcript from alignment at scaffold_220:471298..476381+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052818 ID=TCONS_00052818|Name=TCONS_00052818|organism=Clytia hemisphaerica|type=transcript|length=5084bp|location=Sequence derived from alignment at scaffold_220:471298..476381+ (Clytia hemisphaerica)
taaaaatagacaaaaaataaATGAGAATTAAAATAATAAACGACGATTTC ATCAAagataaaattgaagaaaaaataataaagattGAGTAAGAAAGTTA GAAAGAGAGAGAGACCGCTTCAATCAGATATCTCTAAGCGCAAAAATATA TTCTTCTGTTCATTCATAATATGTCATCTCATATATGGTCTACATGGTAA CtaagataaataaattttttcgaaataatttttttcattttgtatgtTCT TTAGAGAGTGATAAAATGTCAATTATTCACAGTTAATATTTTGTTTTCGC CGAACCATTAATCAGACATTACTCAAGACAAAAATCTATCGTTTAACTTG GTAAGTATACTTTTTAActaatttcaaattaattattATCCCTATCCCTA TCAATTAtccctaaaaatgtttttcatattttctaaaGATCAAAAAGGTT TACCATGTGAAAGCTTGGCTAAACAACTCATAACTTACAAGGTACAACTT TCCGTTGTCTATACGTGTTTgttcaatttcaaaacagacATTGGAATCAA CAAGATAAATTATCcccaaattttcaatgttttttgctgaattttgcTAA ATTAAGACGGAaaagtagactggagtcgtttataatgcgtgtaatacagt agtataggcgttatatgataatacaattattgttacgggatttacttttt gctttatttctactagtcgtctagcttgctagactagcgGAAAAATCTCT TTGGACTTCAcagagacggaaatccgtccgAGACCGAGAGCAGCGACAAC CGTTATAATAAGAAATTAAGGCTAAAATGGGTTGTTAAATTCTTCTTTGG AAATGGAGAAATAGAtttaattttcacaaaaagtctTGCATTTCTGACCA TGTCGAAATTGATAAAGCGGCGATAACGAAAAAAAAGTTAAGGTTTTACG GTGTCAAACATTCGTTACGGTGACAAAATATGGATTTTTTAACACTATTT TGCTATCGTTGTTGGGGGTGGTCTAAGAAAAACGTGTCGGTATCTCACAC ATAACCACGTATACCCTTTAAAGAGTGGTTATATCTTATAATGGTACTTG CAAGGTACAAATCTTAGGTGTTCGTTTTCAAGTTTCGATATTTTAGTCTC TATgtcaaatattcttaaaaaacaCTATACAACTTCTTTAATTTTAGATC TCCGTAGTTGGGAAAGTAACAGGATGGAGAAAAACTTACGGCAGACGACA TACGATGACGATTTCGACATGTTTGGAGAGGTTGTGAACGACGTggctca aagaaaacaaaacgaAGAAAACTTCTTCAATGTTGAAACTAAACCAAACA CTCCTCCAACAACAAATCTACTTATGGAAGTTAATTCAAGCGAAAGCCCA GCTGTATCAAGGCAAAGCGTATATCTTGACGGCACTTTGACGCCAAGTGC CGCCAGAGCTCGAACAGGGTCCTCAAGATCCGCCTCGAACTTATCCATGG ACGGCTTTGAAGGAATAGAGACAGAACGAGAACACAATTTTTCGTATGAT ATCAGAGACTCGTTTGATGATATTGAAGTTCAAAGCAGACTAAGTCGTCG AACAGATTCGGATCCTGTAGTTGAGCGGTTTTATAACGATTCGATTATTG AAGAAACAGTAGGAGAAAAATCCATGGAAAAGAGGCTATCAACACCAGAT GCAGTTATAAGCCGGCGGAATACTCCAAGTAATGAGACAATCGAGCATAC AGAAAATAACCACGACAGAGAAATTGCAACTccaacttctgaatacagtc cAAGGAATAATTTCGACGAACCCCATAACAAAGATACGCTCGCCATCAAC AAAGGAGATTATATTTCAGTGGAAATAAAGAAGAGTGAAACACCATCATT ACAAGAGAAATCTGATAGCCCCAGAAATGATTATGACAACATTGAGAATA ATGAAAAAGACAATAAATTGAATCGGTCTTCATCAGTTGAAAGCCCGAGA GAAAATGTAGATAAAGCCGAGGACACTACGAGCGACAATAATGATGATAA CGACCATGAAACCGAAAAAGAGTCCAAGTGTCACGAGCAAACCTATGAAA GCCCGAGAGAAAATGTAGATAAAGGCGAAGACACTACGAGCGACAATAAT GATAACGACGATGAAACCGAAAACAAGTCCGAGAGCCACGAGCAATCTTA TGATAAAACAGACCAGAGTGATTTCAAAAGCATACTCCATTACAAAGATT CTCTCGaagctgaaaatgaaaaatcaactgAGAAGAAGACCGAGAATTCC ACCGATAAGGACTATGAACAAAACGATAATCAAACTGAGGAGCGAGAAAT ATTGGAGGATGAAAACGAGAGTTTGACCGAAAACGAGGGTGCAGACGAAG ACGAAAATATCGAATCAGAAACCACTCCTAGAGATGAGGACTCTCGGGAA AAGGAAGACGATAATACCGAACGAGGAGAAATTTATCGAAACATCAAgga agtaaacaatgattttaACGAAgtcaaaaaagggaaaattaaaTTATCTA GTGGAAAAGAAATCAACGAAAAATTCGAAGAGGGAGATTCAGGGAACGAG TCTAATGCTTCAAAAGAGAGTTCCATTGCTATGACGACCGAAGAAaacaa attaataaaaaatgaagatggtGAAAATGAGCAGTCGAAAAGTGAAAACT TAGTGAATGGTATACCCCaggagaaaaaagagaaaaataatgatGATTTG GATGAAGATAAGGAGGGTTCAGAAGGGAAACCCGAAAAATTGACTCTGTT GGAAGATATGATGAGAGATTTACAGAGAGAAATTGATGAGGAAAAAGAAG AgcctcaaaagaaaaagaaaactgtGATTTTCAAGAGGGACGGTGATACG TATGATGAAAAAGGAGATCGAAGATATGATATGAGTGCCCTGGAGATGGT CAGTGAGGATGAAAATGAATTCGTTAATCTTCAGGAAGTACAACAAGCTC GGATCGAGTTAAATGATTATGCAAAGGACCTTGATAATTTCAATCATATC ATCAATGAGTTAGAGAAAACACCTGAAGAGAAAAGAATGGAATCAAATCG AAGTTTGACATTCGATTTGGGTGACTTGGGAATCGATGattttgaagatg aagaaagaGAAGGTAGTACTAATCGGAAAACACCGAAAAAAGcgaaaaag ataaagaaaaagaagaagaaaactgATGTTGTTTACAGCAAAGTCTGCCA AAAATGTCGAAATCCAATCTTCAAGAAAGATTCGTATTTAGAactgaatg aaattttcagtgaCAGTGTTTTATGTAAAAAATGTTTGGCTGGTAAAtcg aataataaagaaaaagagaagAAGATCGAAAAGTCTCCGGCGAAACATGA TATTGAGCGGATTAAAGCCGAAGTTAAGCCAGCTTTAGACTCTCGGCTGG AGAAAAGTGAAAATACTGCATTGCAGAAATGGTTGGAGAAAAAGAGTAAA GAGGAACGAGTGAGAAAAAGGCAAGAGCGGAGAGAACGGAAAGCTAAAGC GAAAGAAATAAAACAGAAGAAACGCGAAGAGTCGGAAAAGCAGAAAATGG TGAAACAAAAAGTCGATGATTGGgaggaaaaaaagaagaaagaagctaaa gaaaacaaaaagaggGAGAAAATTTCTTTGCTACTCAACAGTGATAAATC GAGACCTATTTTACATTCACAGAATAGAGGATCGAACAGCTCTTATATGA GTACGTCGGCTACGGACAGTCCAAGAAGTAATGCAACGTTTGAAGTCACC GAGGAGAATTCGTTTGAAAAGTTTCGTGAAGACTTTTTGCAGCATTCTGA AGCAACTCCACCATCGGAATTGACCTATGGGTCTGTCAAAGATTTCGTTC AATCCGTCATTCTCAGTGCTCTCTTAGAGATCGAAAAAGAACAATCGCAT CCAAAACCACTAACCATCAAGCGACCAAAATCGCACGCACCTGCGCTCCG AAACCAACAACGTCACCTGCAACCCAGACCACCTCCTCCCAAAAGTGCGC ACGCGCGGAAATCACAAAATTTACCATTAAGAAGAATTAAAACTAAAGAA CATACTCAATCCAACAAAAACGTCACTCCAAAAGGGTTAATGCGAGCGAA AACCTATGACGAGTGgatgtttgataaaaaagttcaGCGCGGCGTGAaag aaaaggagaaagaaatCAACGAACATTACGATTTACTGCAACAAAAGTTA ATCGAACTGGAGAAAGACCGTAGGAATGCTTTATATCATCTACGAGAGTC TTCCATGATAGAATATCATCATAAACAGTTACCATTACTTTCCAAACGAC TGGAGCCACAAGGAAGTGAATCGTCGTCTATAAAGTCGTACCTTTCCAAT TTATGATATGTTATGATACATTGGAATTGGAAGGATCTGTAGGGTTGCTT CATGTTGCTGTATATACTACGGCCTACTATAAAACTACATAATATGGACG AATCGTCtaaaataattaatttgaatttttttaatatctAGATTTAATTT TATCAATATGTGTTATAACGTCGTTCTCCGTTAGGCAAACCTTTTTAACA AACACTTCAAAGACTTCTTTTTGGGTACCACTTTAAAGTTGTGCTCACTG GATGCGAAACAGAACATTGTCAAATTCCAGACTGATATCACAGATGTAAT GATTATTtccatttttataaatttgcaataaaggaGAGGTTTTCTGATGC CAGAACAGATAACAAGATTGCATTTAATTGAGCCTAATCTAACCATGTTC AATAAGGAAAGTATGGACATTTTAAGAATCCCGTAATTTTTTATTGCTTC AATCGTAAACGCGAACATTAAAACCTTCCTAAAATTTGTTTGGTAGTAAA TATTGAAAGTCAATCTTACCTTTTGATCTGATTTCTCATTACGTTTTTGT CCACATTTCTACCAATAGCATTCAATCTTGTTAACTCCAGCACCTTTTgt taatcatttttttattctgTTAATCTTATTATTTaactaaaaaggaaaat ataattttcaaaacattttataGCAATACCTTGC

Coding sequence (CDS) from alignment at scaffold_220:471298..476381+

>TCONS_00052818 ID=TCONS_00052818|Name=TCONS_00052818|organism=Clytia hemisphaerica|type=CDS|length=3183bp|location=Sequence derived from alignment at scaffold_220:471298..476381+ (Clytia hemisphaerica)
ATGGAGAAAAACTTACGGCAGACGACATACGATGACGATTTCGACATGTT
TGGAGAGGTTGTGAACGACGTggctcaaagaaaacaaaacgaAGAAAACT
TCTTCAATGTTGAAACTAAACCAAACACTCCTCCAACAACAAATCTACTT
ATGGAAGTTAATTCAAGCGAAAGCCCAGCTGTATCAAGGCAAAGCGTATA
TCTTGACGGCACTTTGACGCCAAGTGCCGCCAGAGCTCGAACAGGGTCCT
CAAGATCCGCCTCGAACTTATCCATGGACGGCTTTGAAGGAATAGAGACA
GAACGAGAACACAATTTTTCGTATGATATCAGAGACTCGTTTGATGATAT
TGAAGTTCAAAGCAGACTAAGTCGTCGAACAGATTCGGATCCTGTAGTTG
AGCGGTTTTATAACGATTCGATTATTGAAGAAACAGTAGGAGAAAAATCC
ATGGAAAAGAGGCTATCAACACCAGATGCAGTTATAAGCCGGCGGAATAC
TCCAAGTAATGAGACAATCGAGCATACAGAAAATAACCACGACAGAGAAA
TTGCAACTccaacttctgaatacagtccAAGGAATAATTTCGACGAACCC
CATAACAAAGATACGCTCGCCATCAACAAAGGAGATTATATTTCAGTGGA
AATAAAGAAGAGTGAAACACCATCATTACAAGAGAAATCTGATAGCCCCA
GAAATGATTATGACAACATTGAGAATAATGAAAAAGACAATAAATTGAAT
CGGTCTTCATCAGTTGAAAGCCCGAGAGAAAATGTAGATAAAGCCGAGGA
CACTACGAGCGACAATAATGATGATAACGACCATGAAACCGAAAAAGAGT
CCAAGTGTCACGAGCAAACCTATGAAAGCCCGAGAGAAAATGTAGATAAA
GGCGAAGACACTACGAGCGACAATAATGATAACGACGATGAAACCGAAAA
CAAGTCCGAGAGCCACGAGCAATCTTATGATAAAACAGACCAGAGTGATT
TCAAAAGCATACTCCATTACAAAGATTCTCTCGaagctgaaaatgaaaaa
tcaactgAGAAGAAGACCGAGAATTCCACCGATAAGGACTATGAACAAAA
CGATAATCAAACTGAGGAGCGAGAAATATTGGAGGATGAAAACGAGAGTT
TGACCGAAAACGAGGGTGCAGACGAAGACGAAAATATCGAATCAGAAACC
ACTCCTAGAGATGAGGACTCTCGGGAAAAGGAAGACGATAATACCGAACG
AGGAGAAATTTATCGAAACATCAAggaagtaaacaatgattttaACGAAg
tcaaaaaagggaaaattaaaTTATCTAGTGGAAAAGAAATCAACGAAAAA
TTCGAAGAGGGAGATTCAGGGAACGAGTCTAATGCTTCAAAAGAGAGTTC
CATTGCTATGACGACCGAAGAAaacaaattaataaaaaatgaagatggtG
AAAATGAGCAGTCGAAAAGTGAAAACTTAGTGAATGGTATACCCCaggag
aaaaaagagaaaaataatgatGATTTGGATGAAGATAAGGAGGGTTCAGA
AGGGAAACCCGAAAAATTGACTCTGTTGGAAGATATGATGAGAGATTTAC
AGAGAGAAATTGATGAGGAAAAAGAAGAgcctcaaaagaaaaagaaaact
gtGATTTTCAAGAGGGACGGTGATACGTATGATGAAAAAGGAGATCGAAG
ATATGATATGAGTGCCCTGGAGATGGTCAGTGAGGATGAAAATGAATTCG
TTAATCTTCAGGAAGTACAACAAGCTCGGATCGAGTTAAATGATTATGCA
AAGGACCTTGATAATTTCAATCATATCATCAATGAGTTAGAGAAAACACC
TGAAGAGAAAAGAATGGAATCAAATCGAAGTTTGACATTCGATTTGGGTG
ACTTGGGAATCGATGattttgaagatgaagaaagaGAAGGTAGTACTAAT
CGGAAAACACCGAAAAAAGcgaaaaagataaagaaaaagaagaagaaaac
tgATGTTGTTTACAGCAAAGTCTGCCAAAAATGTCGAAATCCAATCTTCA
AGAAAGATTCGTATTTAGAactgaatgaaattttcagtgaCAGTGTTTTA
TGTAAAAAATGTTTGGCTGGTAAAtcgaataataaagaaaaagagaagAA
GATCGAAAAGTCTCCGGCGAAACATGATATTGAGCGGATTAAAGCCGAAG
TTAAGCCAGCTTTAGACTCTCGGCTGGAGAAAAGTGAAAATACTGCATTG
CAGAAATGGTTGGAGAAAAAGAGTAAAGAGGAACGAGTGAGAAAAAGGCA
AGAGCGGAGAGAACGGAAAGCTAAAGCGAAAGAAATAAAACAGAAGAAAC
GCGAAGAGTCGGAAAAGCAGAAAATGGTGAAACAAAAAGTCGATGATTGG
gaggaaaaaaagaagaaagaagctaaagaaaacaaaaagaggGAGAAAAT
TTCTTTGCTACTCAACAGTGATAAATCGAGACCTATTTTACATTCACAGA
ATAGAGGATCGAACAGCTCTTATATGAGTACGTCGGCTACGGACAGTCCA
AGAAGTAATGCAACGTTTGAAGTCACCGAGGAGAATTCGTTTGAAAAGTT
TCGTGAAGACTTTTTGCAGCATTCTGAAGCAACTCCACCATCGGAATTGA
CCTATGGGTCTGTCAAAGATTTCGTTCAATCCGTCATTCTCAGTGCTCTC
TTAGAGATCGAAAAAGAACAATCGCATCCAAAACCACTAACCATCAAGCG
ACCAAAATCGCACGCACCTGCGCTCCGAAACCAACAACGTCACCTGCAAC
CCAGACCACCTCCTCCCAAAAGTGCGCACGCGCGGAAATCACAAAATTTA
CCATTAAGAAGAATTAAAACTAAAGAACATACTCAATCCAACAAAAACGT
CACTCCAAAAGGGTTAATGCGAGCGAAAACCTATGACGAGTGgatgtttg
ataaaaaagttcaGCGCGGCGTGAaagaaaaggagaaagaaatCAACGAA
CATTACGATTTACTGCAACAAAAGTTAATCGAACTGGAGAAAGACCGTAG
GAATGCTTTATATCATCTACGAGAGTCTTCCATGATAGAATATCATCATA
AACAGTTACCATTACTTTCCAAACGACTGGAGCCACAAGGAAGTGAATCG
TCGTCTATAAAGTCGTACCTTTCCAATTTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033380XLOC_033380Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052818-proteinTCONS_00052818-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052818-exon-scaffold_220-1491911889:471298..471647TCONS_00052818-exon-scaffold_220-1491911889:471298..471647Clytia hemisphaericaexon
TCONS_00052818-exon-scaffold_220-1510915933:471298..471647TCONS_00052818-exon-scaffold_220-1510915933:471298..471647Clytia hemisphaericaexon
TCONS_00052818-exon-scaffold_220-1575043694:471298..471647TCONS_00052818-exon-scaffold_220-1575043694:471298..471647Clytia hemisphaericaexon
TCONS_00052818-exon-scaffold_220-1491911889:472495..476381TCONS_00052818-exon-scaffold_220-1491911889:472495..476381Clytia hemisphaericaexon
TCONS_00052818-exon-scaffold_220-1510915933:472495..476381TCONS_00052818-exon-scaffold_220-1510915933:472495..476381Clytia hemisphaericaexon
TCONS_00052818-exon-scaffold_220-1575043694:472495..476381TCONS_00052818-exon-scaffold_220-1575043694:472495..476381Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:471298..476381 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0615614 0.0309005 0.142533 0.159562 2.63844 2.54429 1.71676 2.37642 2.02434 2.3995 4.73345 4.68883 0.711926 0.809136 1.19333 1.5346 15.0352 13.9587 4.10604 3.18238 1.15031 2.63426 3.30033 6.01752 0.586087 0.752611 0.00998878 0.0101191
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052818 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top