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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052900 ID=TCONS_00052900|Name=TCONS_00052900|organism=Clytia hemisphaerica|type=transcript|length=3545bpRun BLAST on NCBI transcript from alignment at scaffold_222:75848..126326+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00052900 ID=TCONS_00052900|Name=TCONS_00052900|organism=Clytia hemisphaerica|type=transcript|length=50479bp|location=Sequence derived from alignment at scaffold_222:75848..126326+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00052900 vs. Swiss-Prot (Human)
Match: NOTC1 (Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1 PE=1 SV=4) HSP 1 Score: 392.889 bits (1008), Expect = 3.937e-113 Identity = 362/1055 (34.31%), Postives = 476/1055 (45.12%), Query Frame = 2
Query: 185 TNPCANGAACTDLGANGFSCTCLTGFSGNLCQMANTCAVYGALCQNGATCSEDNSDTGFACTCVAGYFGDQC--ELSACSSNP--CQNGGTCTPDASQLGFXXXXXXXXXXXXXXXXXXXXNPCAGGGTCTLNADGTAACACVAPLSGLDCSVS-DACATAGAGSTPITDCDLNGQCIASFTKAAGWECMCNTGYFGTDNLACDMDYCTNNNGICGANGDCILXXXXXXXXXXXXXXXYSGPLCNVQNACNNNLCQNGAQCAISYDVSRGYTCTCANGYSGTNCETSA--CSTTPCQNGATCNPTSLSPGFTCTCLFPYTGSICADNPCSVGTPCQNGATCSPHGASPGYICTCPSGFFGATCVQ--SNCDL--NPCQNGGTCAADGTPDGYTCSCVAGYTGPTCTTSA--CQSNPCQNGATCAPDGTASGYTCTCAIGYTGQLCTGS--ACDSSPCVNGGSCTPDGSASGYTCACLPGFSGDTCI--ISACASLPCKNGGSCTTDGSADGFTCSCAAGYFGATCEA--SNCDDSPCQNGGTCTPDDSGDGFTCTCKTGYFGAFCT--ASACSSAPCRNGGTCK----------ADGTT-------------------------NGYTCTCSASFTGDQCQL-MGCPTDNPCQNGGTCNPGVNGFTCSCATGFTGSSCLNS--NCDATPCKNGATCTPDASTAGYICNCAPGFSGLTCIA--SACDSTPCSNGGSCLADGSSLGYSCNCSTGFEGSTCT--LASCSATACKNGATCIPGIGKVTCICALGFFGTQCE--QSKCDTSPCLNGGTCTQDGTAKGFTCQCPSGFGGDTCQIALSGCANSPCKNGGTCNTITINPGFQCLCAAGYTGSTCEQ--SKCDTNPCQNGATCTPDGSTDGYKCTCTAGYTGLTCTA--SGCDSNPCKNRAGCTPDGSTSGYTCNCKTGFSGPTCL--LSACNPSPCQNGATCSLSSSNPTYYTCQCATGYSGRNCEAKSPCATANLCKNGATCVAHNNQAYCVCAPGFHGPQCQ--YHGCYPNPCLNGGRCTR 3130
TNPC NG C L + C C G+SG CQ A+ CA C NG C + + C C + G C +++ C P C++GGTC + C T C+ +PC GGTC D T CAC+ +G +C + D C P +C G C+ + C C + G YCT + C N CQNG C ++ GY C C NG++G +C + C++ C +GATC+ S F C C TG +C N + PC G+ C + + ICTCPSG+ G C Q C L NPC++ G C T + C C+ GYTGP C C SNPCQN ATC + C C GY G C + C SSPC++ G C + + C C GF+G C + CAS PCKNG C DG + +TC C GY G CE CD PC G+C D FTC C+ GY G C + CSS PCR+GGTC+ GTT +GY C C +TG C + + NPC NGGTC G+NGFTC C G+ +CL+ C++ PC +GA S GY C+C PG+SG C + C+S PC NGG+C D +S GY C C GF G C + C++ C N TCI + C C L + G CE + C SPC NGG C Q + F+C CP+G+ G TC++ ++ C SPC++G +C + G++C C AGY+G CE C NPC NG +CT DG + C C G+ G C + C S+PC+N A CT YTC C GFSG C C S C NG TC ++ +TC C G++G C+ + C +G TC C C G+ GP CQ H C +PC NGG+C +
Sbjct: 108 TNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCA--SNPCANGGQCLP--FEASYICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVTHECACLPGFTGQNCEENIDDC--------PGNNCKNGGACVDGVNT---YNCRCPPEWTGQ--------YCTEDVDEC---------------------------------QLMPNACQNGGTC---HNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVAS--FYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHAGKCI--NTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCL--DQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCL--DKINEFQCECPTGFTGHLCQYDVDECASTPCKNGAKC-LDG-PNTYTCVCTEGYTGTHCEVDIDECDPDPCHY-GSCK--DGVATFTCLCRPGYTGHHCETNINECSSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASSPCDSGTCLDKIDGYECACEPGYTGSMCNINIDECAGNPCHNGGTCEDGINGFTCRCPEGYHDPTCLSEVNECNSNPCVHGAC---RDSLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTC-KDMTS-GYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASCQ--NTHGGYRCHCQAGYSGRNCETDIDDCRPNPCHNGGSCT-DGINTAF-CDCLPGFRGTFCEEDINECASDPCRNGANCT--DCVDSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCVDGINS---FTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQDGCGSYRCTCPQGYTGPNCQNLVHWCDSSPCKNGGKCWQ 1076 HSP 2 Score: 383.259 bits (983), Expect = 6.348e-110 Identity = 357/1077 (33.15%), Postives = 488/1077 (45.31%), Query Frame = 2
Query: 185 TNPCANGAACTDLGANGFS-CTCLTGFSGNLC-QMANTCAVYGALCQNGATCSEDNSDTGFACTCVAGYFGDQCELSA--CSSNPCQNGGTCTPDASQLGFXXXXXXXXXXXXXXXXXXXXNPCAGGGTCTLNADGTAACACVAPLSGLDCSVS-DACATAGAGSTPITDCDLNGQCIASFTKAAGWECMCNTGYFGTDNLACDMDYCTNNNGICGANGDCILXXXXXXXXXXXXXXXYSGPLCNVQ-NACNNNLCQNGAQCAISYDVSRGYTCTCANGYSGTNCETSA--CSTTPCQNGATCNPTSLSPGFTCTCLFPYTGSICADNPCS-VGTPCQNGATCSPHGASPGYICTCPSGFFGATCVQS--------------------------------NCDLN-------PCQNGGTCAADGTPDGYTCSCVAGYTGPTCTTS--ACQSNPCQNGATCAPDGTASGYTCTCAIGYTGQLC--TGSACDSSPCVNGGSCTPDGSASGYTCACLPGFSGDTCI--ISACASLPCKNGGSCTTDGSADGFTCSCAAGYFGATCE--ASNCDDSPCQNGGTCTPDDSGDGFTCTCKTGYFGAFCTA--SACSSAPCRNGGTCKADGTTNGYTCTCSASFTGDQCQLMGCP--TDNPCQNGGTCNPGVNGFTCSCATGFTGSSCLN--SNCDATPCKNGATCTPDASTAGYICNCAPGFSGLTC--IASACDSTPCSNGGSCLADGSSLGYSCNCSTGFEGSTCTLASCS------------ATACKNGATCIPGIGKVTCICALGFFGTQCEQ--SKCDTSPCLNGGTCTQDGTAKGFTCQCPSGFGGDTCQIALSGCANSPCKNGGTCNTITINPGFQCLCAAGYTGSTCEQSKCDTNP----------CQNGATCTPDGSTDGYKCTCTAGYTGLTCT--ASGCDSNPCKNRAGCTPDGSTSGYTCNCKTGFSGPTC--LLSACNPSPCQNGATCSLSSSNPTYYTCQCATGYSGRNCEAKSPCATANLCKNGATCVAHNNQAYCVCAPGFHGPQCQYHGCYP----NPCLNGGRCT 3127
+NPC G+ C NG + CTC +G++G C Q + C++ C++ C N+ F C C+ GY G +CE+ C SNPCQN TC + C T C ++PC G C L+ C C +G C D CA+ T C +C+ + C+C GY GT + D+D C + G+ D + Y+G C N C++ C++G C D Y C C G +G NCE + C+++PC +G + G+ C C YTGS+C N G PC NG TC G+ C CP G+ TC+ NCD+N PC NGGTC D T GY C+C G++GP C T+ C SNPC N TC D +GY C C + YTG C + C SPC NGG C ++C C G+ G TC I+ C PC++G SC + G+ C C AGY G CE +C +PC NGG+CT D + C C G+ G FC + C+S PCRNG C + YTCTC A F+G C+ P T++ C NGGTC G+N FTC C GFTGS C + + CD+ PC +G TC Y C C G++G C + CDS+PC NGG C + Y C C +G+ G C + S S A C++G C+ C C G+ G+ CE +C SPC NG TCT G++C+C +G+ G C + C + PC+NGGTC + + ++C C G G CE + D NP C N TC GY CTC G+ G C + C SNPC R + + C C+ G +G C +++ C PC+NG TC+++S+ + C+C G+ G CE + + C NG TC++ C+C F GP+CQ+ P NPC N G C
Sbjct: 378 SNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHAGKCI--NTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRC-LDKINEFQCECPTGFTGHLCQYDVDECAS--------TPCKNGAKCLDGPNT---YTCVCTEGYTGT-HCEVDIDECDPDPCHYGSCKDGV------ATFTCLCRPGYTGHHCETNINECSSQPCRHGGTCQ---DRDNAYLCFCLKGTTGPNCEINLDDCASSPCDSGTCLDKID---GYECACEPGYTGSMCNINIDECAGNPCHNGGTCE--DGINGFTCRCPEGYHDPTCLSEVNECNSNPCVHGACRDSLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCK-DMT-SGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDD--VAGYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASCQN--THGGYRCHCQAGYSGRNCETDIDDCRPNPCHNGGSCT--DGINTAFCDCLPGFRGTFCEEDINECASDPCRNGANCT--DCVDSYTCTCPAGFSGIHCE-NNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQ--DGCGSYRCTCPQGYTGPNCQNLVHWCDSSPCKNGGKCWQTHTQ--YRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHHCRCQAGYTGSYCEDLVDECSPSPCQNGATCTD--YLGGYSCKCVAGYHGVNCSEEIDECLSHPCQNGGTC--LDLPNTYKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCV--DQVGGYSCTCPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGPFTGPECQFPASSPCLGGNPCYNQGTCE 1404 HSP 3 Score: 333.954 bits (855), Expect = 9.577e-94 Identity = 335/993 (33.74%), Postives = 451/993 (45.42%), Query Frame = 2
Query: 290 TCAVYGALCQNGATCSEDNSDTGFACTCVAGYFGDQCE-LSACSSNPCQNGGTCTPDASQ----------LGFXXXXXXXXXXXXXXXXXXXXNPCAGGGTCTLNADGTAACACVAPLSGLDCSVSDACATAGAGSTPITDCDLNGQCIASFTKAAGWECMCNTGYFGTDNLACDMDYCTNNNGICGANGDCILXXXXXXXXXXXXXXXYSGPLCNVQNACNNNLCQNGAQCAISYDVSRGYTCTCANGYSGTNCETS--ACSTTPCQNGATCNPTSLSPGFTCTCLFPYTGSICADNPCS-VGTPCQNGATCSPHGASPGYICTCPSGFFGATCVQS--NCDLNP--CQNGGTCAADGTPDGYTCSCVAGYTGPTCTTSA--CQSNPCQNGATCAPDGTASGYTCTCAIGYTGQLC-TGSACDSSPCVNGGSCTPDGSASGYTCACLPGFSGDTC--IISACA--SLPCKNGGSCTTDGSADGFTCSCAAGYFGATCE--ASNCDDSPCQNGGTCTPDDSGDGFTCTCKTGYFGAFCTAS--ACSSAPCRNGGTCKADGTTNGYTCTCSASFTGDQCQ--LMGCPTDNPCQNGGTCNPGVNGFTCSCATGFTGSSCLNS--NCDATPCKNGATCTPDASTAGYICNCAPGFSGLTCI--ASACDSTPCSNGGSCLADGSSLGYSCNCSTGFEGSTCT--LASCSATACKNGATCIPGIGKVTCICALGFFGTQCEQS--KCDTSPCLNGGTCTQDGTAKGFTCQCPSGFGGDTCQIALSGCANSPCKNGGTCNTITINPGFQCLCAAGYTGSTCE--QSKCDTNPCQNGATCTPDGSTDGYKCTCTAGYTGLTCT--ASGCDSNPCKNRAGCTPDGSTSGYTCNCKTGFSGPTC--LLSACNPSPCQNGATCSLSSSNPTYYTCQCATGYSGRNCEAKSPCATANLCKNGATCVAHNNQAYCVCAPGFHGPQCQ--YHGCYPNPCLNGGRCT 3127
C+ G C NG C N AC C + G +C+ + C S PC+N GTC + LGFS C T NPC GGTC L C C SG C +D CA+ C GQC+ A + C C + G D++ C G+C G C ++ Y C C ++G NCE CS +PCQNG TC PT C CL +TG C +N G C+NG C Y C CP + G C + C L P CQNGGTC T GY C CV G+TG C+ + C S C +GATC D AS Y C C G TG LC AC S+PC G +C + C C G++G C + C+ + PC++ G C + F C C GY G CE + C +PCQN TC D G+ F C C GY G C + C+S+PC + G C N + C C FTG CQ + C + PC+NG C G N +TC C G+TG+ C CD PC G+ A + C C PG++G C + C S PC +GG+C ++ Y C C G G C L C+++ C +G TC+ I C C G+ G+ C + +C +PC NGGTC +DG GFTC+CP G+ TC ++ C ++PC +G +++ G++C C G++G+ C+ ++C++NPC NG TC T GY CTC G++G C + C SNPC N+ C D +GY CNC ++G TC +L+ C PSPC+NG C S ++ +C C TG+ G+ CE + C++GA+C + C C G+ G C+ C PNPC NGG CT
Sbjct: 23 RCSQPGETCLNGGKCEAANGTE--ACVCGGAFVGPRCQDPNPCLSTPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNACLT-----NPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCAS--------NPCANGGQCLPF---EASYICHCPPSFHGP-TCRQDVNECGQKPGLCRHGGTC-------------------------------------------HNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTG-DVTHECACLPGFTGQNCEENIDDCPGNNCKNGGACV--DGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTC--HNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCH-DRVASFY-CECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHAGKCIN--TLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCL-DQIGE-FQCICMPGYEGVHCEVNTDECASSPCLHNGRCL--DKINEFQCECPTGFTGHLCQYDVDECAS-TPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGSC---KDGVATFTCLCRPGYTGHHCETNINECSSQPCRHGGTCQDRDNA--YLCFCLKGTTGPNCEINLDDCASSPCDSG-TCLDKIDGYECACEPGYTGSMCNINIDECAGNPCHNGGTC-EDGI-NGFTCRCPEGYHDPTCLSEVNECNSNPCVHGACRDSLN---GYKCDCDPGWSGTNCDINNNECESNPCVNGGTCK--DMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDD--VAGYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYESF-SCVCPTGWQGQTCEVDINECVLSPCRHGASCQNTHGGYRCHCQAGYSGRNCETDIDDCRPNPCHNGGSCT 923 HSP 4 Score: 333.183 bits (853), Expect = 1.581e-93 Identity = 300/839 (35.76%), Postives = 404/839 (48.15%), Query Frame = 2
Query: 884 YSGPLCNVQNACNNNLCQNGAQCAISYDVSR----GYTCTCANGYSGTNCET---SACSTTPCQNGATCNPTSLSPGFTCTCLFPYTGSICAD-NPCSVGTPCQNGATCSPHGASPGYICTCPSGFFGATCVQ--SNCDLNP--CQNGGTCAADGTPDGYTCSCVAGYTGPTCTTS--ACQSNPCQNGATCAPDGTASGYTCTCAIGYTGQLCTGSA--CDSSPCVNGGSCTPDGSASGYTCACLPGFSGDTCI--ISACASLP--CKNGGSCTTDGSADGFTCSCAAGYFGATCEASNCDD---SPCQNGGTCTPDDSGDGFTCTCKTGYFGAFCTAS-ACSSAPCRNGGTCKADGTTNGYTCTCSASFTG-------DQCQLMGCPTDNPCQNGGTCNPGVNGFTCSCATGFTGSSC-LNSN-CDATPCKNGATCTPDASTAGYICNCAPGFSGLTCIAS--ACDSTPCSNGGSCLADGSSLGYSCNCSTGFEGSTCT--LASCSATACKNGATCIPGIGKVTCICALGFFGTQCEQS--KCDTSPCLNGGTCTQDGTAKGFTCQCPSGFGGDTCQIALSGCANSPCKNGGTCNTITINPGFQCLCAAGYTGSTCE--QSKCDTNPCQNGATCTPDGSTDGYKCTCTAGYTGLTCTAS--GCDSNPCKNRAGCTPDGSTSGYTCNCKTGFSGPTCL--LSACNPSPCQNGATCSLSSSNPTYYTCQCATGYSGRNCEAKSPCATANLCKNGATCVAHNNQAYCVCAPGFHGPQCQ-------------------------------YHG---------CYPNPCLNGGRCTRNRYGE 3145
+ GP C N C + C+N C + V R Y C+CA G+SG C T +AC T PC+NG TC+ +L+ + C C ++G C +PC+ PC NG C P AS YIC CP F G TC Q + C P C++GGTC + Y C C A +TGP C C +PCQNG TC P G + + C C G+TGQ C + C + C NGG+C DG + Y C C P ++G C + C +P C+NGG+C + G+ C C G+ G C + N DD + C +G TC D F C C G G C + AC S PC G C + CTC + +TG D+C L NPC++ G C + F C C G+TG C ++ N C + PC+N ATC + C C PG+ G+ C + C S+PC + G CL + + C C TGF G C + C++T CKNGA C+ G TC+C G+ GT CE +CD PC + G+C +DG A FTC C G+ G C+ ++ C++ PC++GGTC + + C C G TG CE C ++PC +G TC DGY+C C GYTG C + C NPC N C + +G+TC C G+ PTCL ++ CN +PC +GA C S + Y C C G+SG NC+ + +N C NG TC + C C GF GP CQ Y G C P+PC NGG C ++ E
Sbjct: 52 FVGPRCQDPNPCLSTPCKNAGTCHV---VDRRGVADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTCDLLTLTE-YKCRCPPGWSGKSCQQADPCA-SNPCANGGQCLPFEAS--YICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEVG--SYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVT-HECACLPGFTGQNCEENIDDCPGNNCKNGGACV-DG-VNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHN--THGGYNCVCVNGWTGEDC-SENIDDCASAACFHGATC--HDRVASFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGA----NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCL--DQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINE--FQCECPTGFTGHLCQYDVDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPC-HYGSC-KDGVAT-FTCLCRPGYTGHHCETNINECSSQPCRHGGTCQDR--DNAYLCFCLKGTTGPNCEINLDDCASSPCDSG-TCL--DKIDGYECACEPGYTGSMCNINIDECAGNPCHNGGTC--EDGINGFTCRCPEGYHDPTCLSEVNECNSNPCVHGA-CRDSLNG---YKCDCDPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYE 851 HSP 5 Score: 323.939 bits (829), Expect = 1.582e-90 Identity = 325/973 (33.40%), Postives = 426/973 (43.78%), Query Frame = 2
Query: 542 CAGGGTCTLNADGTAACACVAPLSGLDCSVSDACATAGAGSTPITDCDLNGQC-IASFTKAAGWECMCNTGYFGTDNLACDMDYCTNNNGICGANGDCILXXXXXXXXXXXXXXXYSGPLCNVQNACNNNLCQNGAQC---AISY---------------DVSR-------------------GYTCTCANGYSGTNCET--SACSTTPCQNGATCNPTSLSPGFTCTCLFPYTGSICADNPCS-VGTPCQNGATCSPHGASPGYICTCPSGFFGATCVQ--SNCDLNP--CQNGGTCAADGTPDGYTCSCVAGYTGPTCTTS---------------------------------------ACQSNPCQNGATCAPDGTASGYTCTCAIGYTGQLCTGSACD----SSPCVNGGSCTPDGSASGYTCACLPGFSGDTCIISA--CASLPCKNGGSCTTDGSADGFTCSCAAGYFGATCEAS--NCDDSPCQNGGTCTPDDSGDGFTCTCKTGYFGAFCT--ASACSSAPCRNGGTCKADGTTNGYTCTCSASFTGDQCQLMGCPTD-NPCQNGGTCNPGVNGFTCSCATGFTGSSCLN--SNCDATPCKNGATCTPDASTAGYICNCAPGFSGLTCIASA--CDSTPCSNGGSCLADGSSLGYSCNCSTGFEGSTC--TLASCSATACKNGATCIPGIGKVTCICALGFFGTQC--EQSKCDTSPCLNGGTCTQDGTAKGFTCQCPSGFGGDTCQIALSGCANSPCKNGGTCNTITINPGFQCLCAAGYTGSTCEQ--SKCDTNPCQNGATCTPDGSTDGYKCTCTAGYTGLTCTA--SGCDSNPCKNRAGCTPDGSTSGYTCNCKTGFSGPTCL--LSACNPSPCQNGATCSLSSSNPTYYTCQCATGYSGRNCEAKSPCATANLCKNGATCVAHNNQAYCVCAPGFHGPQCQ--YHGCYPNPCLNGGRCT 3127
C GG C A+GT AC C G C + C + T C G C + A + C C G+ G L + C N C G C L T +SG C + C +N C NG QC SY DV+ Y C C ++G NCE CS +PCQNG TC PT C CL +TG C +N G C+NG C Y C CP + G C + C L P CQNGGTC T GY C CV G+TG C+ + AC SNPC G+ C + CTC GYTG C+ + ++PC + G C + + C CL G++G C I C S PC+N +C F C C GY G CE + C SPC + G C D + F C C TG+ G C C+S PC+NG C DG N YTC C+ +TG C++ D +PC G+C GV FTC C G+TG C + C + PC++G TC D A Y+C C G +G C + C S+PC + G+CL GY C C G+ GS C + C+ C NG TC GI TC C G+ C E ++C+++PC++G + G+ C C G+ G C I + C ++PC NGGTC +T G+ C C G++G C+ ++C +NPC N TC D + GYKC C YTG TC + C +PC+N C ++C C TG+ G TC ++ C SPC++GA+C + Y C C GYSGRNCE N C NG +C N A+C C PGF G C+ + C +PC NG CT
Sbjct: 31 CLNGGKCEA-ANGTEACVCGGAFVGPRCQDPNPCLS--------TPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNACLTN--PCRNGGTCDL--LTLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFEASYICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTG-DVTHECACLPGFTGQNCEENIDDCPGNNCKNGGACV--DGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTC--HNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHAGKCI--NTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLD--QIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCL--DKINEFQCECPTGFTGHLCQYDVDECASTPCKNGAKC-LDG-PNTYTCVCTEGYTGTHCEVDIDECDPDPCHY-GSCKDGVATFTCLCRPGYTGHHCETNINECSSQPCRHGGTCQ-DRDNA-YLCFCLKGTTGPNCEINLDDCASSPC-DSGTCLDKID--GYECACEPGYTGSMCNINIDECAGNPCHNGGTCEDGINGFTCRCPEGYHDPTCLSEVNECNSNPCVHGAC---RDSLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCKDMT--SGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVA--GYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASCQNTHGG---YRCHCQAGYSGRNCETDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFRGTFCEEDINECASDPCRNGANCT 961 HSP 6 Score: 320.087 bits (819), Expect = 2.193e-89 Identity = 319/942 (33.86%), Postives = 425/942 (45.12%), Query Frame = 2
Query: 191 PCANGAACTDLGANGFSCTCLTGFSGNLCQM-ANTCA----VYGALCQNGATCSEDNSDTGFACTCVAGYFGDQCE--LSACSSNPCQNGGTCTPDASQLGFXXXXXXXXXXXXXXXXXXXXNPCAGGGTCTLNADGTAACACVAPLSGLDCSVS-DACATAGAGSTPITDCDLNGQCIASFTKAAGWECMCNTGYFGTDNLACDMDYCTNNNGICGANGDCILXXXXXXXXXXXXXXXYSGPLCNVQN-ACNNNLCQNGAQCAISYDVSRGYTCTCANGYSGTNCETS--ACSTTPCQNGATCNPTSLSPGFTCTCLFPYTGSIC--ADNPCSVGTPCQNGATCSPHGASPGYICTCPSGFFGATCVQ--SNCDLNPCQNGGTCAADGTPDGYTCSCVAGYTGPTCTTSA--CQSNPCQNGATCAPDGTASGYTCTCAIGYTGQLCTG--SACDSSPCVNGGSCTPDGSASGYTCACLPGFSGDTCI--ISACASLPCKNGGSCTTDGSADGFTCSCAAGYFGATCE--ASNCDDSPCQNGGTCTPDDSGDGFTCTCKTGYFGAFC--TASACSSAPCRNGGTCKADGTTNGYTCTCSASFTGDQC-----------QLMGCPTDNPCQNGGTCNPGVNGFTCSCATGFTGSSC--LNSNCDATPCKNGATCTPDASTAGYICNCAPGFSGLTCIAS--ACDSTPCSNGGSCLADGSSLGYSCNCSTGFEGSTCTL----------ASCSATACKNGATCIPGIGKVTCICALGFFGTQCE--QSKCDTSPCLNGGTCTQDGTAKGFTCQCPSGFGGDTCQIALSGCANSPCKNGGTCNTIT-INPGFQCLCAAGYTGSTCEQS-------KCDT-----------------------------------NPCQNGATCTPDGSTDGYKCTCTAGYTGLTC 2731
PC NGA C D G N ++C C G++G C++ + C YG+ C++G F C C GY G CE ++ CSS PC++GGTC + C T C ++PC GTC DG CAC +G C+++ D CA C G C G+ C C GY L+ +++ C +N + GA D + D +SG C++ N C +N C NG C D++ GY CTC G+SG NC+T+ C++ PC N TC G+ C CL PYTG+ C PC+ +PC+NG C + C CP+G+ G TC + C L+PC++G +C T GY C C AGY+G C T C+ NPC NG +C DG + + C C G+ G C + C S PC NG +CT YTC C GFSG C C C NGG+C DG + FTC C G+ G+ C+ + CD PC +GGTC D + CTC GY G C C S+PC+NGG C T Y C C + +TG C Q G CQ+GG C N C C G+TGS C L C +PC+NGATCT GY C C G+ G+ C C S PC NGG+CL ++ Y C+C G +G C + + C N TC+ +G +C C GF G +CE ++C ++PC GT F C+C +G G C+ ++GC PCKNGGTC + GF C C AG+ G+TCE +C NPC N TC P + Y+C C A + GL C
Sbjct: 536 PCKNGAKCLD-GPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGS-CKDGVAT--------FTCLCRPGYTGHHCETNINECSSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASSPC-DSGTCLDKIDGYE-CACEPGYTGSMCNINIDECAG--------NPCHNGGTCEDGIN---GFTCRCPEGYHDPTCLS-EVNECNSNPCVHGACRDSL------NGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCK---DMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTC--IDDVAGYKCNCLLPYTGATCEVVLAPCAP-SPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASC--QNTHGGYRCHCQAGYSGRNCETDIDDCRPNPCHNGGSCT-DGINTAF-CDCLPGFRGTFCEEDINECASDPCRNGANCT--DCVDSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCV-DG-INSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQ--DGCGSYRCTCPQGYTGPNCQNLVHWCDSSPCKNGGKCWQ--THTQYRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHHCRCQAGYTGSYCEDLVDECSPSPCQNGATCT--DYLGGYSCKCVAGYHGVNCSEEIDECLSHPCQNGGTCLDLPNT--YKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVDQVGGYSCTCPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGPFTGPECQFPASSPCLGGNPCYNQGTCEPTSESPFYRCLCPAKFNGLLC 1425 HSP 7 Score: 316.62 bits (810), Expect = 2.963e-88 Identity = 286/819 (34.92%), Postives = 386/819 (47.13%), Query Frame = 2
Query: 932 CQNGAQCAISYDVSRGYTCTCANGYSGTNCET-SACSTTPCQNGATCNPTSLS--PGFTCTCLFPYTGSICAD--------NPCSVG--------------------------------TPCQNGATCSPHGASPGYICTCPSGFFGATCVQ--SNCDLNP--CQNGGTCAADGTPDGYTCSCVAGYTGPTCTT--SACQSNPCQNGATCAPDGTASGYTCTCAIGYTGQLCTGSA--CDSSPCVNGGSCTPDGSASGYTCACLPGFSGDTCI--ISACASLP--CKNGGSCTTDGSADGFTCSCAAGYFGATCEASNCDD---SPCQNGGTCTPDDSGDGFTCTCKTGYFGAFCTAS-ACSSAPCRNGGTCKADGTTNGYTCTCSASFTG-------DQCQLMGCPTDNPCQNGGTCNPGVNGFTCSCATGFTGSSC-LNSN-CDATPCKNGATCTPDASTAGYICNCAPGFSGLTCIAS--ACDSTPCSNGGSCLADGSSLGYSCNCSTGFEGSTCT--LASCSATACKNGATCIPGIGKVTCICALGFFGTQCEQ--SKCDTSPCLNGGTCTQDGTAKGFTCQCPSGFGGDTCQIALSGCANSPCKNGGTCNTITINPGFQCLCAAGYTGSTCE--QSKCDTNPCQNGATCTPDGSTDGYKCTCTAGYTGLTCTAS--GCDSNPCKNRAGCTPDGSTSGYTCNCKTGFSGPTCL--LSACNPSPCQNGATCSLSSSNPTYYTCQCATGYSGRNCEAKSPCATANLCKNGATCVAHNNQAYCVCAPGFHGPQCQ--YHGCYPNPCLNGGRCTRNRYG 3142
C NG +C + C C + G C+ + C +TPC+N TC+ + C+C ++G +C NPC G PC NG C P AS YIC CP F G TC Q + C P C++GGTC + Y C C A +TGP C C +PCQNG TC P G + + C C G+TGQ C + C + C NGG+C DG + Y C C P ++G C + C +P C+NGG+C + G+ C C G+ G C + N DD + C +G TC D F C C G G C + AC S PC G C + CTC + +TG D+C L NPC++ G C + F C C G+TG C ++ N C + PC+N ATC + C C PG+ G+ C + C S+PC + G CL + + C C TGF G C + C++T CKNGA C+ G TC+C G+ GT CE +CD PC + G+C +DG A FTC C G+ G C+ ++ C++ PC++GGTC + + C C G TG CE C ++PC +G TC DGY+C C GYTG C + C NPC N C + +G+TC C G+ PTCL ++ CN +PC +GA C S + Y C C G+SG NC+ + +N C NG TC + C C GF GP CQ + C NPCLN G C + G
Sbjct: 31 CLNGGKCEAANGTE---ACVCGGAFVGPRCQDPNPCLSTPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFEAS--YICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEVG--SYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVT-HECACLPGFTGQNCEENIDDCPGNNCKNGGACV-DG-VNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHN--THGGYNCVCVNGWTGEDC-SENIDDCASAACFHGATC--HDRVASFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGA----NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCL--DQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINE--FQCECPTGFTGHLCQYDVDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPC-HYGSC-KDGVAT-FTCLCRPGYTGHHCETNINECSSQPCRHGGTCQ--DRDNAYLCFCLKGTTGPNCEINLDDCASSPCDSG-TCL--DKIDGYECACEPGYTGSMCNINIDECAGNPCHNGGTC--EDGINGFTCRCPEGYHDPTCLSEVNECNSNPCVHGA-CRDSLNG---YKCDCDPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAG 812 HSP 8 Score: 117.472 bits (293), Expect = 3.176e-26 Identity = 122/376 (32.45%), Postives = 168/376 (44.68%), Query Frame = 2
Query: 185 TNPCANGAACTDLGANGFSCTCLTGFSGNLCQMAN-TCAV--------YGALCQNGATCSEDNSDTGFACTCVAGYFGDQCE--LSACSSNPCQNGGTCTPDASQLGFXXXXXXXXXXXXXXXXXXXXNPCAGGGTCTLNADGTAACACVAPLSGLDCSVS-DACATAGAGSTPITDCDLNGQCIASFTKAAGWECMCNTGYFGTDNLACDMDYCTNNNGICGANG--DCILXXXXXXXXXXXXXXXYSGPLCN-VQNACNNNLCQNGAQCAISYDVSRGYTCTCANGYSGTNCETSA--CSTTPCQNGATCNPTSLSPGFTCTCLFPYTGSIC---ADNPCSVGTPCQNGATCSPHGASPGYICTCPSGFFGATC 1252
++PC NG C + C C +G++G C + + +C V LCQ+G C + + C C AGY G CE + CS +PCQNG TCT C + C ++PC GGTC L+ T C+C G+ C ++ D C + C NG C+ + G+ C C G+ G + D++ C +N C A G +C+ A ++G C V N C C+NG CA++ + +RG+ C C G+ G CE A C + C NG TC SP TC CL P+TG C A +PC G PC N TC P SP Y C CP+ F G C
Sbjct: 1065 SSPCKNGGKCWQTHTQ-YRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVD--AGNTHHCRCQAGYTGSYCEDLVDECSPSPCQNGATCTDYLGGYSCKCVAGYHGVNCSEEIDECLSHPCQNGGTC-LDLPNTYKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCV---DQVGGYSCTCPPGFVG-ERCEGDVNECLSNP--CDARGTQNCV---QRVNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTCGSLRCLNGGTCISGPRSP--TCLCLGPFTGPECQFPASSPCLGGNPCYNQGTCEPTSESPFYRCLCPAKFNGLLC 1425 The following BLAST results are available for this feature:
BLAST of TCONS_00052900 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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