TCONS_00053325 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053325
Unique NameTCONS_00053325
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1598

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053325 ID=TCONS_00053325|Name=TCONS_00053325|organism=Clytia hemisphaerica|type=transcript|length=1598bp
CAAGGAATAAAAACATAGTTTTGGTTTTAAGCTGTGCATCTTTTAGACAT
GTTTCTGCTTTATCTGTTTTTAATGGGAATTTCGTCCTCATTTTCGCAGA
AATGTAAAAGACAGGTTCCCGAGAACAGACATGGCATTCGACCAATAGTC
ATCACCAACAAAGCTGAAGCTGTTCAAcaaaataatctcaaaaagACATT
ACCCATTTTATCACCGGAATGGGAGGTCGAATTGAACCTGACAATGAATG
CAAATCATGTAAACACTGGAATACCAGGAGGGGATTGGTGTTCAGTATTC
CATATGACAAAAGGCGATGAACTAGGCTCTCATGGCGATCGTACACCGGC
AATATATCATTATAAGGTTGATGGGAAAATATGGCTTTTTTCATCTGTAG
GGAATGATTTCGATCATAGCTTCAATCGTCTTATCGAGTTCAATAACCAG
TACCATATAAAGATCAGCCAAAGATATAAAAACGGAGGTGTTTACGAGTA
TTCGATTGAAATAAATGGAGAAAAGGTTCACGCTGTGGATAATCTAAAAG
CACGACAATTTTATGGAGTCAAAGTTTACCTCGGAAACCCATGGAAGACA
CCGTGTGTTGCAACGATAAGCTATATGAATATCGTGAATTTCCTGTAGAT
TTTGATCAGAGAATTTTCACGATAGCGTGACAGTACTGActtcaaaggaa
aatatttttgcgtCAAAAAATTATAGGGTTGCTTGTCATTCTCCATTAGG
GGCCACCTTTTCTTCTTTATAAGAGGTACTTTACGTGTGTGTCTACAAAT
TGCCTTCGTATCTGGCAAAAACATTTTGGCATACAAGTatggaaaatctt
ttaaatttttgagcttTCACTGTCTGTTTATCGATAATCAAAAATTGTAC
GTCTTTCTAAGAAAACCATAATATCATAATTTAGCACTTCGTTTGTTAAA
CCGTCGAGCGTCTAGAACTCGAATCTGCgcgaggaacacaaatttgttcg
agttaaggaattttcgagttatggaataaGATTTAAGGCAAATTGTTATT
TGAAGCGACGAgtaaacttgttcgagttaacgAGAAATTAGAGTTAAAGT
CTCTACCGTACTATAATTTTGCACTTGTTCGTTTGTCGATAAAGGTTCAA
TTTCGCTGTACTCTAGCTGAACTTTTTAAAGGTGTGTATTTTACGGATCG
GAATATAAAAAAAAGCTGAAGGGATATTTAATATTTGACTAGGTTGTGAA
CATATCGTACTAAGGGTTTCGAAAACGGTCGTTGAATGATTGAAAACCTA
TCATTTTTTTGACGAACATATAATGCAAAAGCAGccgagattttttagaa
atatgtgttcttatcttaagagaccaaatgttatgaccATTAACCATTAA
ATTTTCCATACAAAttatgtgttctgatttctatcgccctatttgtctcc
ctaaacttatcattactttatggtttgatgtgctctaaaatctaggaaaa
acagtttgccaagataaacttgtaatatatttgttttgctccacgaaaga
tgtgttatGAAAatttactaggcaacaagattacataaattttctctt
Run BLAST on NCBI

protein sequence of TCONS_00053325-protein

>TCONS_00053325-protein ID=TCONS_00053325-protein|Name=TCONS_00053325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=199bp
MFLLYLFLMGISSSFSQKCKRQVPENRHGIRPIVITNKAEAVQQNNLKKT
LPILSPEWEVELNLTMNANHVNTGIPGGDWCSVFHMTKGDELGSHGDRTP
AIYHYKVDGKIWLFSSVGNDFDHSFNRLIEFNNQYHIKISQRYKNGGVYE
YSIEINGEKVHAVDNLKARQFYGVKVYLGNPWKTPCVATISYMNIVNFL
Run BLAST on NCBI

transcript from alignment at scaffold_228:280479..293547-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053325 ID=TCONS_00053325|Name=TCONS_00053325|organism=Clytia hemisphaerica|type=transcript|length=13069bp|location=Sequence derived from alignment at scaffold_228:280479..293547- (Clytia hemisphaerica)
CAAGGAATAAAAACATAGTTTTGGTTTTAAGCTGTGCATCTTTTAGACAT
GTTTCTGCTTTATCTGTTTTTAATGGGAATTTCGTCCTCATTTTCGCAGA
AATGTAAAAGACAGGTTAGTACGATTCATTACCAGTGTGTACCGAAAAAA
GCGTACAAATTTTTCTTTGAAAATAAAAAAGCATTATCCAAACTGGGCTT
TTAACAATTGAAATAAGATTGAAATTCTCTGTTCAATCAATATATATTCA
ATTCCTAAGACGAGTGAAAATGTTTTAGAGATTGAAATATTAAGTAAACA
AGTTATAAAATCTCGCATTTTTCATGAGAATTTTACTTTGTACAAAAATT
TGTCCACTTTTTTGGGAAACTGTACAGTGTGTTCGTAAAAAAACGAGCAG
ATTTTTTTATAAAGTTCACTGAGTTCAGAATACTTAAATCAGAGGGAATT
TCTTTGTTCAATCAACTGTTGGCTCAGACTTGGATTTTCTTGATTTTTCA
AAAAAAATTCAAGCTTTAATGTTCTTACGATATTCTTAACACGTTTAGTT
TCTTTACTTAAAATCTAAAATAGTTTTTATTTAAATCTGTTAAAATTTTT
TACTTTAGCAGTAATTTCTGAAATCTGAGGTCAGGATTGTTCTGAAATTG
TTTTTAAGTTTTGGCCAACTTTTAGCTAAAATTGTTCGCTAAGGCTTGGA
AATGGAATTATTGAAATATTGAAATACATCTTGCATTTTAGCAGGGATTT
CAGTTTCCAAATGGGTAGATATAAAGAAACGCAAGACCAAAATGATTTTG
ATATCCCTGAAGTATTTACCATTGCAAAAAGAATTTTGGTCTTAAACTCG
TCGTTAAGCTCGTCTTTAAAAACTTTCATTTTGACTTTTGACAAAAATTA
TTTTTTCTTGCTAAAAAGAGATCATAGAAGACGAAATGGTATTATGAAAA
ACTGAAAAGCTTAAGATTTATTTTGCTCAAAGACCTCATTGAAGATTTCC
ATCTCTCAAAACTTCAGAAGTGTGAGTTTATTTATTGAAACAGAGGCCGT
TAAACGGCATGCTACCCAAAATTTAGTACAAATAAAAAAAAACAGACCTG
AAAAGGCCCTAAATTTTTTTTCCTCCTAATTTTTGCCTTTAGTGCGATTT
TTAACAGAAGGCCTCGCAATATTTAGGACTTCTGATCTTAAATTGGACCT
CACAATAGGTTAAATTTTTATTAAAAAATAAACAATACACCTTGAAGTTT
ATGACTTCAGCCCCCTCCCAAAAAAGGCTGTTGACATCCTACCCTACTCG
AGAAAACAGAATAAAATGAGAAAATTGAGGAGTTTTAAAGAACAGTTTCA
AAATCAAGGGGGGGGTGAGTTTCAATGAACGTGAGAACCCTGCTATGAAT
GATATTCTCCAAGATGTTTTAAATTGGTAGCATCTTTAAATTTTCTAAAT
GCCAAGTTAACAAAGATTTCTTTTTATGTAGGTTCCCGAGAACAGACATG
GCATTCGACCAATAGTCATCACCAACAAAGGTAACGTGAATTTTGGAGAG
TAATTATTTAAAGTCCGTTCGCTTTAAGTATACACTTCTCTTATTTAATA
AACTTCAACTTCTTTTAAACGCCTTCCCTTTGAAAAACCGAAATAATTTA
ATAAACATTGGTCAAAAAGAGTACAATATATCTTGTATTTTACATGTACA
AAATATAAATTGACGCAAAGATGTTGTTGCATTGTTGTTGCAGTAGCAGC
AATCTAACGTGATTTTGCTAAAAAGAAGTGTCCTCCGCTTTATTCCAACA
CAAAAAGTGCATATATTTGGGTCACCGATAAACCCCTTCCCTTTGAAAGA
CTGAAAAACTGAAACAATTAATATCTTCTTCTATAAAAAGTGCTAAGTTT
TAATAGATAGTTAACCTTTTTGTTTCTAAATTTTTCAAACTGTCCGCAAA
GAATTGAACTGTTAATTTTTTCAGAAAAATTCTGTTTTTCTGTGAAGAAT
TTGGATGAAAAATTGGTCAAAAAGCACTATTTTCAAGATTTTGAGATAAA
TGAGCTTTTAGAAAAATTTTCCGAAGATATATTTTTATTTCGGTAAAAGA
TACACGGTAAAAATTTTCAAAATGTTTTTTCTTCGCCAAAAATAAGTTCT
TCAAAGTTGAAAAACTCTTCTTCGCAAAAGTCTTCATTTTCTTCTTCGTC
AATTTTTTTTATTGCGATTCTTAAATTTTCAGACTCAAGGATAATTGGCC
TAACAGAAAATGTATAACATGCTACCATTTTGTGTGCTGCATCAAGTAGA
AATTTAAATTTTGTACGTGGCAAATATTAAAAATTAGGGCCCTTAAGTAT
CTATATGTTAATCTCCGCCGGCTTGCGGAGAGAAATGAAAAATCTGTGCT
CTAAAGGCGAAACTTTGCAGTGGAAAATCTGCGCAATTTAAACGTTGCAG
AATTTGACAAGAATAAAATTACAGATTTTCGCAGCGTTGAAATTCAATGT
TATTTTCCGACCCTGATACGATTCCAAATGCTGAATAATCTACTCAGGAA
AGAGAATGGAAAATAAACTTTCTGAGCAATCTAGAGCGTAAAAAATCAAT
TTAATCTATTCTAGCTGAAGCTGTTCAACAAAATAATCTCAAAAAGACAT
TACCCATTTCATCACCGGAGTGGGAGGTAGAATTGAACCTGACAATACAT
GCAAATCATGTAAACACTGGAATACCAGGAGGGCATTGGTGTTCCGTACT
CCATATGACAAAAGGCGATGATCAAGGTTTGCATGGCGAGCGTACACCGG
CAATATTTTATAATAGTATTGATGGGAGACTACAGATTGCGTCCACTGTA
GGAAATGATTTCAACCATAAATTCGATCTTCCTATCGAGTTCAATAACCA
GTACCAAATAAAGATCAGCCAAAGATATAAAAACGGAGGCGTTTACGAGT
ATTCGATTGAAATAAATGGAGAAAAGGTTCACGCTGTTGATAATCTAAAA
GCACAACAATTTTATGGAGTCAAAGTTTACCTCGGAAACCCATGGAACTT
GCCATGTGTTGCAACAATAAGCTATATGAATATCGTGAATTTCCTGTAGA
TTTTGATCAGAGAATTTTCACGATAGCGTGACAGTACTGACTTCAAAGGA
GAATATTTTTGCGTCAAAAAATTATAGGGTTGCTTGTCATTCTCCATTAG
GGGCCACCTTTTCTTCTTTATAAGAGGTACTTTACGTGTGCGTCTACAAA
TTGCCTTCGTATCTAGCAAAAACATTTTGGCATACAAGTATGGAAAACTT
TTAAATTTTTTTAGCTTTCACTGTCTATTTATCGATAGTCAAAGATTGTA
CGTCTTTCTAAGAAAACCATAATATACTTCGTTTGTTAAACCGTCGAGCG
TCTAGAACTCGAATCTGCGCGAGGAACACAAATTTGTTCGAGTTAAGGAA
TTTTCGAGTTATGGAATAAGATTTAAGGCAAATTGTTAATTGAAGCGACG
AGTAAATTTGTTCGAGTTAACGAGACATTCGAGTTAACGAGACTCTACCG
TACCATAATTTTGCACTTGTTCGTTTGTCGATAAAGGTTCAATTTCGCTG
TACTCTAGCTGAGCTGGGGATGTCAACTATGATAATCGGAGAGGCACGTG
TCTGAATCTTTCTGAATTTACTTGTTGTTGACAGTCATAAATTTTTTTAA
AGGTGTGTATTTTACGGACCGGAATATAAAAAAAGCTGAAGGGATATTTA
ATATTTGACTAGGTTGTGAACATATCGTACTAAGGGTTTCGAAAACGGTC
GTTGAATGATTGAAAACCTATCATTTTTTTGACGAACACATAATGCAAAA
GCAGCCGAGATTTTTTAGAAATATGTGTTCTTATCTTAAGAGACCAAATG
TTATGACCATTAAATTTTTCATACAAATTATGTGTTCTGATTTCTAAGAA
ACCTTTATCGCCCTATTTGTCTCCCTAAACTTATCATTACTTTATGGTTT
GATGTGCTCTAAAATCTAGGAAAAACAGTTTGCCAAGATAAACTTGTAAG
ATATTTGTTTTGCTCCACGAAAGATGTGTTCTGAAAATTTACTAGGCAAC
AAGATTACATAAATTTCTCTTGATTATACGGGGATTATACGTGTCTACTT
AAAAGATATGTTCTGAAGCTTTCTAGGGCTACCTAGACAACAAGAATACA
CAGTAGATGACCTTGATTATACCACTGTCTCACCAGAACACATCATCATT
TGTAGCTGATTAATTTTCGAAGATCTGGTCAGAACAGATCAAAATTTCTA
GCTGAAATATGGTCTCAGAACACATCGGAAAAAAGGTCGTCTCGCTGGCT
GCTTTTGCATAATGGGACCAAATTCCCGAAATGATTTTGTGTCTTTGGTT
TTCCGCGGAAACTCCGCCCGTATTATTCAATTTTTATTTCATTCCGTAAA
ATCTGTAAAATATAATATGTAAATATATAAATCATTTCACTTGGTGGAAA
AAATAACAAAGTTTACTAATTTATTCCCAATGTTTGAAATGAACATTAAA
TTATATTGTATCAAATTGTAGTTTTATTCTGCCTGTATTGAAAGTAAACA
AAGGAAATTTATGACACGATTCGATATACACGTTGTTTTTTTTTAAGAAA
CACACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAACAT
CTAAGAAACATGCTGAGGCTGAGAATGAGAAAATAACATTTTTTAATTCG
GTATTTTAACAACCTTCCAATCAAAACAAATGTTTTTTTTTCTTTGTATG
AAAAATAGGCTGATTATGTCAAAAAGTTTAGAAACATGTAAGAAACATTT
TTAAGGGTCAAAAGGCCGATTTCTTAAGAAACATTAAGGCTGCTTGGTAA
AACTAGTTTCTTAAAAAAAAACGTGTAATGCTGTAATCTGTACTCTAAAT
CCTCCAAAATAAGTTTTTCACTTTAAATCTAGATGGTCTATCGCATGTTG
TTCATTGCTCTAAATTTATATTTTTGTATCGCTATCCCTTGAGATTCTAT
AAAACGTTAAGAAATCTAAAAGTTTTTAAAATTTGATAAGGTATAAGTAT
AAGGGTGGCATTTAATCTTGGGGTACACACGTTTTTTTTATAAGAATGGT
GTATATTCAATTAATCATGGATATTCTTAACTAATTGGTCGAAATCATCC
TGAAATACTCTTAAAGTATTCTTAGATTAAGATGAAAACATAACCTAAAT
CTAGCATGCAATATATGCCTCAAGGAAGAATTTGGGAACTTCTTAGAACT
TCTTACTCTCGGGTGCCTAATAAACGTTTATTTTTTTCGTGTCAAATTTC
CCACCTGTACGCAACTTATTAGGGCCTGTACGTTTATTTCTTTTGAAGAA
TTTTCCCGCCTGTACGTTTATTCCCGCTTGTACGTTTATTCCCTCGTGTA
CGTTTATTTATCTTGACACAATATCGCCCGATTCATACTGGAAAAAATTA
TGTGGTCTTCTAAAAACTGATATAAAGTATTGACTCAATTAATTCATTCG
TTACTTACAGTAATAAAAGATTATTTAAGGGCTCTGACCATAGTGAATTT
TTAATACTTGCCACTTGCAAAATATGAATTTCTTCCTGATGTAGCGGACA
AAACTTTGATATATTATACATTTTCTGTTAGGCCAACTACCCGTGAGTCT
GAAAATTTAAAAATCGCAATGAAAAAAATTAATGAAGAAGAAAATGAAGC
TTTTGCGAAGAAGAGTATTTCAACTTTGAAGAGCTTAGTTTGGGCGAAGA
AAAAACATTTTGAAAAGATTTTTGCGGTAGATGGTCTATTTTTTATCGAA
CTAAAATTATAAATTTCTGGAAAATTTTTCTAAAAGCTTATTTGCTTCAA
AATCTTGAAAATAGTGCTTTTTGACCAATATTATTAATGTCTTTTTAAAG
TTCATAACGTCATTTTTGCAATTAAGTTCTTAATTACTCTTAAGGGATTT
GATTAAGAGGCAATTTATAAAAGCGATTCTTTGTTAAAAGTGTTAAAGCA
TCTAAACATAACTTTTATGTTCAGATACTAAAATCAATTTTCCGACTATG
GTCAGAGCCCTTAAGTACTTGTCAATGATCGATAAGAGATATACCTATAC
TTAAGTCAGTCTTTTTGACCTGGATGTTCTACTTTTGAAAAATTGGTAAA
TTTTTCCCTGTACGTTTATTTTAACTCTGATTTCTCGCCCGTTCCTTTAT
TTCAGCCTGTACGTTTACTGTATTAATTCCAATTTTATCTCCCCCCTGTA
CGTTTAAATTTTGGTCTGTACGTTTATTAGGCACCCGAGAGTAGCATTGC
TTGGGAGTAAATGGCAATATACAGGTAAAAGGCAAGGTAAAATAATCTAA
TCTAATCTAAATATCTTAGCTTCAGTTGCCTAATTCCATGATAGCAATAT
TCTTACGATATCCTTAATTTTTGGGCATTTTCATCATGGACAATATCTTA
TAAAGTTTATTCTTAGAAAAAAAGCTTATGATGGATATTTTTTAATTTCT
TTTGTCCATTATATCGTTAAATTTGTCTGATTTTAGGGAAGCCTTAGAAA
ACATCATTGATGGTCACACCAACCTCGCCCCGTGTATTCCAGGCTTTATC
TACGTAACTGGTAGACGCCAGGGAACACCCTAAGCCAGGCTGACAGCTGC
AGCGCAATGACTACAAAATAGAAGAACGAATAAAATCTGACGTTTTGTTT
TTGAATTACGTAACCTTTCGCATTTGAAAACCAGACAATATCAGGGTATA
ACGTAGCTAGGATTTCGATAACCGCTGTCAATTGATGGGGAATTAAAGTA
AATTTTCTCTCAAGAACTCTTTGGAAAACTGTATCAAAAAATATCAACAA
GGGTTTTTTAATTATGAAATAGTATTGTCAGGAATTCCGACAACGGCTGT
CAAGTGGTAGAGGATTTGTAATTTTTTTTCTATAGAAGTTTCAGCTTGTT
AATTTCGCTTAGCGAAAGTATTACGATAGCCTTCCGTGTGTCTGGCTGGC
GAGACATTTTTTAGGGCGCAAATTATGGCGTGGGCGTTTGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTGACAGTTTTTTATCCGATGAAGTTTGATTGGTGTTCGATGAGTT
TGGTTAGTAAAAGTTCCAGCTTTTCCTCCCCGATGGGATGATAGATATTG
GCTCACTCTTTAAGCTTTAGCGTGGGCGTTTGCTAATAAGCCTTCGGAAT
GTAAAAAGAATGGGCAACAAGGTAATAAATCAAACTAATCGAGCTTCAAT
CAAACTTCACTGATCTTGACACACCTTTTGCTAATTAGGATTTTCATTTT
GAACCATGGTACATTGTCTGTATTAGATTCCCATTTCCGCACTAAGATTC
TTGCTTACTTTTCTGGAATCTTTCCCCTATATATTTTTCATGGGATAATC
GGCAAGAGATTGGGGAGGGTTTGTTTAATGGGATGCAGTTTAAAGCAGTT
ATAAAGGAGTCAAAGTTTAATCTCATCAAGGAGTATTATTTCTTTAAAGC
TTAAAGTTGGCTAGTTTTTACCCTGCAATTTTCTAGTCCAGAAGCTGGAG
CTTTTTTTATAAGCATAACGTTTATAAGCATACTGAAGCTCAAATTTCCA
GAAAAATTAAGCATATGCTAAGCATACCTTGAGGCTCAGCCAAAGAAATT
TTTAGTATCATAATTTCCCAAACTTCAGAAAATAACAGAAGAATGAAGAA
GAGAATTACAAACAAAATTCGAAAAATTGGTGATTTTATTTTGTTTAATC
TCTTATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCATAATGCTGCAGGAGTCACGTTTCA
CGCGTCTTCGTCGTTGATGTTCAAGTATTATGCGAAATTTTCGACTTTAA
GTCGTCTTGTTTACTTTGATAAAAAGTGAATAGAAATGTCAGTAAAAGTA
GTAAAATGTAAACATTGCGCGAACCACGTGTCATAAAAGAGAACAATTAA
AATCACGTGTCCAAAACAAACTTGTAAAACAATTGACCAATCAAAATTAG
CCATATTTAGTTTGATTTTTTATTTTGACATGTGACATTTGTTTTGATTT
TGTATCCGCTGCATACAGTTTGTTTACATATTTCGCAAGTACTGTTATGT
CCCTTTAATGTACAAAAAAAGGAAACAAGACGACTTGAAGTCGGAAATTT
CAACAAATATTTGCAAAAAAGTATGCTGAAATGCCGGCTTTTANGCTTGT
TTACTTTGATAAAAAGTGAATAGAAATGTCAGTAAATGTCATGCAAGTAA
ATCCTCTCCTTAAACAAGACGACTTGAAGTCGGAAATTTCACCAAATATT
TGCAAAAAGTATGCTAAAATGCCAGCTTTGCCGATTCTATTTTATTTATA
AAAGCTGAATTATGCTTCAGGCGCCTTTGCTTAGTTCTTCAATTAAAACA
TATGAATAATTAAGGAAAATTCCGTCAAACATAAATTTAGGAATGAATAA
ATTAAAATTCTTAGTGAATTCAATTTCGGTTAGTTCAAAATAAATTATTA
TAAATTATTAACAATTTCGGTTAGTTCAAAATAAATCATTAAAAATTTTG
AACTAAAAAAAAGGGAGAAAAAAAGTAGCATAGTAACATAAACAATATCA
TCGTTCAAGCGCCCTAAGTTAAACGCTTAGACATTAAAATACCNGTTAGT
TCAAAATAAATCATTAAATATTTTGAACTAAAAAAAAGGGAGAAAAAAAG
TAGCATAGTAACATAAACAATATCATCGTTCAAGCGCCCTAAGTTAAACG
CTTAGACATTAAACTACGTTTTCAGCAATGCATTTTTTGGTAGCATTTTG
TTTTTTATTTGGAATTTCATCCACAGTTACACAGAGATGTAAAAGACAGG
TTTGTATCATATAATTTTCAGAATGTTTTTCAAACGGCACAGGATTTGCT
TTCTTTATTAGAACAAAAACCTTCAGAGCTTTAGCGTGTCGGATGAAAAT
TTCACCATCTGGCTGGCACACATAAGGCACTATTGTGAGACAATATTTTC
ACGATGTTGTGCCTTTCCCAGCCAAATCATACATAATGGTTGTGTTGAAA
TACGCATTAATAATGCTTCTTCTTTCATTTATTCGACATTTTTGAGTTTT
GTTTTTAAAAATATTTCGCAGATAACCCAGCTGCCACACAACGTTGTTTC
AACGTCAATTTAATGTTCACAACGTCCATTTAACCTTACATGAACGTTGA
AACAACGTTTTGTGTCAGTTGGGAAGACCTTTCCAAATTTCCATATTGAC
AATAATTTCGCGTAAGAATTCAAATCCGCAAAATCCGTCAAGTTTTATTC
CAGGATTAGAGAAAATGATTGCCAGTGATAACTCTTTCCATACCGCACCA
GCTAATTTTATGCCTTGAAATACATTTTTTAGTCGCCGTAGATTTATTTG
AGGACCTTATTCAAAAAAGTGGCATGCTGAAGAGATAGCTTTTGAAACGA
GTTTTCTAACGAACCGGAAAATGAACTAAATTACTTTCGTCAAAGCCAAG
ACAATTCACTTCAAAGTTTGCGATTTCAAAAAAATTGTTTTTTGATTTTT
CGGGTATTAAAGAAGTTAAAGAAAATCTTATCTTTATTTTCTTTTTAAAT
ACAGGTTCCCGAGAACAGACATGGAATTCAACCAATAGTCATCACCAACA
AAGGTAACATAAAAAGAATCACAAATCCTTGCTGGTCGAGCGTAAACTTA
TAAAGTCCATTCGTGAAATTTTTTCCGCACAAAGCATTGTGGGGAATTCT
CGGAGGTCAAATCTGAGTTTTTATATATAGCCGATATCGTCTATTGCAAA
ATTTTCAGACATTTCAGTCATTTCAATACTCCAATTTCAAATGAATCAAT
CTAGAGCGTAAAAAAAAAATCTAATCTATTTTAGCTGAAGCTGTTCAACA
AAATAATCTCAAAAAGACATTACCCATTTTATCACCGGAATGGGAGGTCG
AATTGAACCTGACAATGAATGCAAATCATGTAAACACTGGAATACCAGGA
GGGGATTGGTGTTCAGTATTCCATATGACAAAAGGCGATGAACTAGGCTC
TCATGGCGATCGTACACCGGCAATATATCATTATAAGGTTGATGGGAAAA
TATGGCTTTTTTCATCTGTAGGGAATGATTTCGATCATAGCTTCAATCGT
CTTATCGAGTTCAATAACCAGTACCATATAAAGATCAGCCAAAGATATAA
AAACGGAGGTGTTTACGAGTATTCGATTGAAATAAATGGAGAAAAGGTTC
ACGCTGTGGATAATCTAAAAGCACGACAATTTTATGGAGTCAAAGTTTAC
CTCGGAAACCCATGGAAGACACCGTGTGTTGCAACGATAAGCTATATGAA
TATCGTGAATTTCCTGTAGATTTTGATCAGAGAATTTTCACGATAGCGTG
ACAGTACTGACTTCAAAGGAAAATATTTTTGCGTCAAAAAATTATAGGGT
TGCTTGTCATTCTCCATTAGGGGCCACCTTTTCTTCTTTATAAGAGGTAC
TTTACGTGTGTGTCTACAAATTGCCTTCGTATCTGGCAAAAACATTTTGG
CATACAAGTATGGAAAATCTTTTAAATTTTTGAGCTTTCACTGTCTGTTT
ATCGATAATCAAAAATTGTACGTCTTTCTAAGAAAACCATAATATCATAA
TTTAGCACTTCGTTTGTTAAACCGTCGAGCGTCTAGAACTCGAATCTGCG
CGAGGAACACAAATTTGTTCGAGTTAAGGAATTTTCGAGTTATGGAATAA
GATTTAAGGCAAATTGTTATTTGAAGCGACGAGTAAACTTGTTCGAGTTA
ACGAGAAATTAGAGTTAAAGTCTCTACCGTACTATAATTTTGCACTTGTT
CGTTTGTCGATAAAGGTTCAATTTCGCTGTACTCTAGCTGAACTTTTTAA
AGGTGTGTATTTTACGGATCGGAATATAAAAAAAAGCTGAAGGGATATTT
AATATTTGACTAGGTTGTGAACATATCGTACTAAGGGTTTCGAAAACGGT
CGTTGAATGATTGAAAACCTATCATTTTTTTGACGAACATATAATGCAAA
AGCAGCCGAGATTTTTTAGAAATATGTGTTCTTATCTTAAGAGACCAAAT
GTTATGACCATTAACCATTAAATTTTCCATACAAATTATGTGTTCTGATT
TCTATCGCCCTATTTGTCTCCCTAAACTTATCATTACTTTATGGTTTGAT
GTGCTCTAAAATCTAGGAAAAACAGTTTGCCAAGATAAACTTGTAATATA
TTTGTTTTGCTCCACGAAAGATGTGTTATGAAAATTTACTAGGCAACAAG
ATTACATAAATTTTCTCTT

Coding sequence (CDS) from alignment at scaffold_228:280479..293547-

>TCONS_00053325 ID=TCONS_00053325|Name=TCONS_00053325|organism=Clytia hemisphaerica|type=CDS|length=2400bp|location=Sequence derived from alignment at scaffold_228:280479..293547- (Clytia hemisphaerica)
ATTACCCATTTTATCACCGGAATGGGAGGTCGAATTGAACCTGACAATGA
ATGCAAATCATGTAAACACTGGAATACCAGGAGGGGATTGGTGTTCAGTA
TTCCATATGACAAAAGGCGATGAACTAGGCTCTCATGGCGATCGTACACC
GGCAATATATCATTATAAGGTTGATGGGAAAATATGGCTTTTTTCATCTG
TAGGGAATGATTTCGATCATAGCTTCAATCGTCTTATCGAGTTCAATAAC
CAGTACCATATAAAGATCAGCCAAAGATATAAAAACGGAGGTGTTTACGA
GTATTCGATTGAAATAAATGGAGAAAAGGTTCACGCTGTGGATAATCTAA
AAGCACGACAATTTTATGGAGTCAAAGTTTACCTCGGAAACCCATGGAAG
ACACCGTGTGTTGCAACGATAAGCTATATGAATATCGTGAATTTCCTGTA
GCTGAAGCTGTTCAACAAAATAATCTCAAAAAGACGTTCCCGAGAACAGA
CATGGCATTCGACCAATAGTCATCACCAACAAAGATGTTTCTGCTTTATC
TGTTTTTAATGGGAATTTCGTCCTCATTTTCGCAGAAATGTAAAAGACAG
ATTACCCATTTTATCACCGGAATGGGAGGTCGAATTGAACCTGACAATGA
ATGCAAATCATGTAAACACTGGAATACCAGGAGGGGATTGGTGTTCAGTA
TTCCATATGACAAAAGGCGATGAACTAGGCTCTCATGGCGATCGTACACC
GGCAATATATCATTATAAGGTTGATGGGAAAATATGGCTTTTTTCATCTG
TAGGGAATGATTTCGATCATAGCTTCAATCGTCTTATCGAGTTCAATAAC
CAGTACCATATAAAGATCAGCCAAAGATATAAAAACGGAGGTGTTTACGA
GTATTCGATTGAAATAAATGGAGAAAAGGTTCACGCTGTGGATAATCTAA
AAGCACGACAATTTTATGGAGTCAAAGTTTACCTCGGAAACCCATGGAAG
ACACCGTGTGTTGCAACGATAAGCTATATGAATATCGTGAATTTCCTGTA
GCTGAAGCTGTTCAACAAAATAATCTCAAAAAGACGTTCCCGAGAACAGA
CATGGCATTCGACCAATAGTCATCACCAACAAAGATGTTTCTGCTTTATC
TGTTTTTAATGGGAATTTCGTCCTCATTTTCGCAGAAATGTAAAAGACAG
ATTACCCATTTTATCACCGGAATGGGAGGTCGAATTGAACCTGACAATGA
ATGCAAATCATGTAAACACTGGAATACCAGGAGGGGATTGGTGTTCAGTA
TTCCATATGACAAAAGGCGATGAACTAGGCTCTCATGGCGATCGTACACC
GGCAATATATCATTATAAGGTTGATGGGAAAATATGGCTTTTTTCATCTG
TAGGGAATGATTTCGATCATAGCTTCAATCGTCTTATCGAGTTCAATAAC
CAGTACCATATAAAGATCAGCCAAAGATATAAAAACGGAGGTGTTTACGA
GTATTCGATTGAAATAAATGGAGAAAAGGTTCACGCTGTGGATAATCTAA
AAGCACGACAATTTTATGGAGTCAAAGTTTACCTCGGAAACCCATGGAAG
ACACCGTGTGTTGCAACGATAAGCTATATGAATATCGTGAATTTCCTGTA
GCTGAAGCTGTTCAACAAAATAATCTCAAAAAGACGTTCCCGAGAACAGA
CATGGCATTCGACCAATAGTCATCACCAACAAAGATGTTTCTGCTTTATC
TGTTTTTAATGGGAATTTCGTCCTCATTTTCGCAGAAATGTAAAAGACAG
ATTACCCATTTTATCACCGGAATGGGAGGTCGAATTGAACCTGACAATGA
ATGCAAATCATGTAAACACTGGAATACCAGGAGGGGATTGGTGTTCAGTA
TTCCATATGACAAAAGGCGATGAACTAGGCTCTCATGGCGATCGTACACC
GGCAATATATCATTATAAGGTTGATGGGAAAATATGGCTTTTTTCATCTG
TAGGGAATGATTTCGATCATAGCTTCAATCGTCTTATCGAGTTCAATAAC
CAGTACCATATAAAGATCAGCCAAAGATATAAAAACGGAGGTGTTTACGA
GTATTCGATTGAAATAAATGGAGAAAAGGTTCACGCTGTGGATAATCTAA
AAGCACGACAATTTTATGGAGTCAAAGTTTACCTCGGAAACCCATGGAAG
ACACCGTGTGTTGCAACGATAAGCTATATGAATATCGTGAATTTCCTGTA
GCTGAAGCTGTTCAACAAAATAATCTCAAAAAGACGTTCCCGAGAACAGA
CATGGCATTCGACCAATAGTCATCACCAACAAAGATGTTTCTGCTTTATC
TGTTTTTAATGGGAATTTCGTCCTCATTTTCGCAGAAATGTAAAAGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033652XLOC_033652Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053325-exon-scaffold_228-1575043694:293434..293547TCONS_00053325-exon-scaffold_228-1575043694:293434..293547Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1575043694:292018..292066TCONS_00053325-exon-scaffold_228-1575043694:292018..292066Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1575043694:290900..290933TCONS_00053325-exon-scaffold_228-1575043694:290900..290933Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1575043694:280479..281879TCONS_00053325-exon-scaffold_228-1575043694:280479..281879Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1510915933:293434..293547TCONS_00053325-exon-scaffold_228-1510915933:293434..293547Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1510915933:292018..292066TCONS_00053325-exon-scaffold_228-1510915933:292018..292066Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1510915933:290900..290933TCONS_00053325-exon-scaffold_228-1510915933:290900..290933Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1510915933:280479..281879TCONS_00053325-exon-scaffold_228-1510915933:280479..281879Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1491911889:293434..293547TCONS_00053325-exon-scaffold_228-1491911889:293434..293547Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1491911889:292018..292066TCONS_00053325-exon-scaffold_228-1491911889:292018..292066Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1491911889:290900..290933TCONS_00053325-exon-scaffold_228-1491911889:290900..290933Clytia hemisphaericaexon
TCONS_00053325-exon-scaffold_228-1491911889:280479..281879TCONS_00053325-exon-scaffold_228-1491911889:280479..281879Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053325-proteinTCONS_00053325-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:280479..293547 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	2.40635e-06	0	0	0.000651097	0	0	0	0.00112963	0	0	0	0.30824	0	0	0	0	0	0	0	0.094934	0	0	0	3.17709e-07	0	0.159239	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053325 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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