TCONS_00053394 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053394
Unique NameTCONS_00053394
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2410

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053394 ID=TCONS_00053394|Name=TCONS_00053394|organism=Clytia hemisphaerica|type=transcript|length=2410bp
ttagttttagATTGAAAAATGCAGAAAATAAATGCAAGTAAGATAATCAA
TAAATGGTCAACACACAATTCAGGAAATGTAAACGCAATAGAATTTGAAT
CAGCACCAGCGCTAGATGAAATAGGAAcagaattttcaagaattaACAGA
AGACGCAACATTGCTTCACACAGAGGacaaaaaagagacaaaaatgcATT
ATTGGTTGAAGAAGCTGTGCAAAAGTCAAAGAAGTTTTCCTTGGTGTTGC
CAGTTTTGAAGAATCCATCAAAAGAGTATACTATTTATTCTTGCAAGAGT
TGTTCGAATTTGCTGGAGTTTACAGATGCCCCTGTCACTCAGTCAAGCAC
CAAAACAATCAACTTGCTTGATCATATCACAAGAAAAACCAGGAAGTCTT
ATCTACATTGGATAGCACCCACTCTTGTCTTTatgtcaaaagaaaaacaa
agattcaaTGGAAGAGCTTCTTCACTTGGCATACCATGAAGAATTTGGCA
AGTTATTTCAATGCAATATGCGTTCAACGATCAGATCAACTGTCATTGAG
AGCAGCTAGAAAGAAAGAGCATCCAGTTGTGTTTGttcattcagaggaaa
gcttTTTTGGGTCAGTTCTCCTGCATATCTACTTAGCATGTGTTGATACT
CAGATCCCAACAACAGTTTTGAAAGGTGATTGTGTCAAGTCTTCTTTGGT
AAGATACTTTATGCGAAAAATGGGTTTCCTCTTTATGGGAAATGAGAAAG
AAAGTGAATCCAGCATAAAAGATGTTGTAGAGattctCTTGGATGCATTG
AAAAAGGGGCACAGTATCCTGATACCTACCCGGCCTTATCAATATGATAC
TGAACCACAACCAAACATCATGGATTATTGTCTCAAAGCTCAAAGAAATA
AGGATAGTCGTTTGGGCAGAGCTTTGGTGAGCTGTATCactttatcaaaa
gaaagaGTATTTTCATCTGAGGATGGATCTTTTACACTGAAGACTCTTAT
CTTTTCGTTGTGGAGAAGCGTTTCCAATTTTGGTCTACTGCATATAAACG
TTTCAAGATGTGTCAAATTGAAGTCGTTGGTAAGAGCTGCAAAAGATTTG
AACCAACAAGAAGAAGTTCATGAAGAAAACAATCTCATCTCAAGACATCT
CAACTTTGACATGTTGGAAACACAAAACATCTTACCTGTACACATTGTAT
CATGTTTGTTGTGTACCAAGTACCGTCTCACAAAAGGGGTCTCGTTAGAA
GATTTGTCGAAGGATGTTGAAGCATGGACGGAAAAACTGAAAGAAATGTC
TAAGAACATTGGTTTCTGCGGTGAACCTATCGACATAACATCGCACGCTA
TACAACTTCTTCACCAGCAAGATTTGATCACGGTTCATGAAGTCGACAAT
AAGATCAAACCAAAATTATCAACCATCAAGCAAGCATCCTTATTTTATCA
ACACTCTCTGAAAATGGTGCATACATTCATGACAAGGGCAGTTCTAGCTT
GTACGATCATTTCTGAATGTGGTGGTGAAAAAATCTTGAGATTTCCAAGT
ACACATCAAATAACCTTTATTGGAAGCAAGATTTTGGAGAAAGCAGAATT
TTTGAGTGAAATGGTTTCTTTCCTACTTGATTACCATTGTCCATTCAATC
AAATTTCGGACTCCTTGACGTCGACAATGGATCATTTTGTTGCTATGGGC
TACATCAAAATGCAAGAGACGGGTTTTATGGACAACTATCATCAACGGTT
AGCTCGTTGTGCACAAATCAACAGTGCCCTTGGTGAAGAAGATTTTGATG
GGCGGAACAATGAAATCATCTATGAGTTGGTGATGCATGAAGATTTGCTG
ACGTATCATCAATTTCTTCAACCTTTCGTGCAATTATCTTTCACAGTGCT
TGCCCTCATCAAAGAGCAATTTTCAGATGAATTGTTTCAAGTGAGTGGTA
TCTATACAAAAGTGGAAGAAAGATACAACACTGGTTTCTTTAAGTACGGG
GAAATGGTGCACATGGAGTTTGTGTCTCGTTTCTGTGATTACCTTTTCGA
AATGGAGGTTGTAGACGATGAAAAAGATTGGTACAAATTGTCCCAGGATT
ATCGAACCAATGACGAACTTCTACTGTACTTGCAGAGAATCGCAAAATTT
CGTGCTTAAAGACATGTTTTATTGTTGGCAGACTGTAAGTGAGAAATTGT
TGTTTTTACACATATTTAACTCAAGtgtaggtttttttttaaactgatca
aaaacgaaaatttagcaaaatctaAAGGGACCTAttcaaaagttgttttt
atatgtggagatgtttttataaatattttttatgagaaatattatctttt
tgaaaattgaacttTCATTTTGTGAGTTTTTCTTGACCTTTTTGTTCCGC
CGGAAATTTC
Run BLAST on NCBI

transcript from alignment at scaffold_23:16556..29801+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053394 ID=TCONS_00053394|Name=TCONS_00053394|organism=Clytia hemisphaerica|type=transcript|length=13246bp|location=Sequence derived from alignment at scaffold_23:16556..29801+ (Clytia hemisphaerica)
ttagttttagATTGAAAAATGCAGAAAATAAATGCAAGTAAGATAATCAA
TAAATGGTCAACACACAATTCAGGAAATGTAAACGCAATAGAATTTGAAT
CAGCACCAGCGCTAGATGAAATAGGAAcagaattttcaagaattaACAGA
AGACGCAACATTGCTTCACACAGAGGacaaaaaagagacaaaaatgtttg
ttttacATTTGTTTTTCTGATATGAAAATGTATgactatgaaaaaaaaaa
tcacttttaaatgGGTTTCAAAGGACGTTATAAGATACAATTCTTTACGA
TTGAATATTATGAATGCACATTTTTATCCAAAGAAAATTAAaggaaaaaa
gatgaaaaattgacaatcaaactgaatattttttttgttttcaggcATTA
TTGGTTGAAGAAGCTGTGCAAAAGTCAAAGAAGTTTTCCTTGGTGTTGCC
AGTTTTGAAGAATCCATCAAAAGAGTATACTATTTATTCTTGCAAGAGTT
GTTCGGTAAGAATAATCGTAGTTGTCCTTGTAGTTTTATGCATTCCACCT
TCCTAAAGTTCTAAATAATAAATCTAAGTCTCTCTTTTAATTTGTATTCC
ACCTTCTAAATGGTTCTGTTCAACACTAATGAGTGCTTAATGATTTGAAT
TTGCTAAAAAGCCCAAAAACAGTTTGGAATAGCTTTCATACTTTCAAATG
TTTGGATATGTTTCAATCCCGCCctcattttttaatttgtgaAGTATCAT
CAACTGCatcctttttttcctttttcggccaaaattttttacttttactc
TTAACCTTGTACATTTTATTAATCCAATTTAGGCACCCATGAGTATCTTT
CTAACTTGATTCAATTCAgattttttgtaatatatgCTCTTACAGAATTT
GCTGGAGTTTACAGATGCCCCTGTCACTCAGTCAAGCACCAAAACAATCA
ACTTGCTTGATCATATCACAAGAAAAACCAGGTATTAGGAAAACAAAACT
TTgcaaagaatattttgaatcaGATCAGTTCATTTTGttgtacaaaaaat
aataaaataacttTTCATTGAATGGATCTGATGATTTTCATCAGGATTAA
GCCAAATTGCAACACTTTTTCTTAGTGGACTAGTAACCTTACAAACTATT
AAACTTGTGTTTTGATTCAACCTCTATGTTCTTATCTCAGGAAGTCTTAT
CTACATTGGATAGCACCCACTCTTGTCTTTatgtcaaaagaaaaacaaag
attcaaTGGAAGAGGTGAAAAATATTTAACTATTCTTACAAATTATGATA
AtttggatttatttttaatgtacaGTATTCTCAttatctatttttatttt
agattatTTAGCTGTGAAAGTGTACATAACACTAATACCACTAATTTTTG
TGTCAATCTCTTTACTGACTTTTAAAATCAACAAATGCCTTTGCAAAACC
TTCAAAATCACTAATTTTCTACATGATAAAGTTCTgaaagaagacaaaaa
atttGTGAAACTGAGTTTATTGTACTTTTTGTTAGtccaataaattttta
tttgtttttagatGAAGTCTCAAAACCATCTTTTATACATTGGtaaattt
gtttgttattttgTCTATCTTACTCAAATTATCTGGTTTGTCTGTGCCTA
CATGAAAGGAGGTTACACATAACaggggggggttgtacttttacggtgtg
acgggattgacccttttttagtacggtattacgagatttgacaaaaaaag
agacgggaaaacggtattttaaaatcagacggtgacggtatttaggtaca
tttttgccctgtacaagccggtgtgacggtgtcattatttttccaatttt
caggattccgggattcagcaaaaattttgacgggaaaacggtattttaaa
atcagacggtgacggtatttaggtacatttttgccctgtacaagccggtg
tgacggtgtcattatttttccaattttcaggattccgggattcagcaaaa
attttgacgggaaaacggtatttcgaacccctaccaACCCTCCCATAACA
TTGTTCGGTTTTTACTGTAAGGTATATATCTGATTAACATGACACTCCTA
CTTTAAACCTTGTTTTAGCTGACGTTACTgtataaaaaacaacattttgt
gtACTGTTCTATTAAGCTTCTTCACTTGGCATACCATGAAGAATTTGGCA
AGTTATTTCAATGCAATATGCGTTCAACGATCAGATCAACTGTCATTGAG
AGCAGCTAGAAAGGTACAATTAAGGGGTAGAGGTTACCTCTAAGAAATGT
TcaactaaaaagaaaagaacTGATTTTCACTAGAACTAATGATTTCCCTC
ACTTTGTTTCCGTTTCTAGGTGTCTACTACAGAACAAATAAGATCTGCAA
CAtgcattttcaaacttttacttTCCACTCTAATACTGCGAGGCTGgcat
ttttttaatcgtagatTTTAATTTAGAATTGATTTGAGGAGTTGTAACTC
GAGTTATAAATCTTTGATTTTAGAAAGAGCATCCAGTTGTGTTTGttcat
tcagaggaaagcttTTTTGGGTCAGTTCTCCTGCATATCTACTTAGCATG
TGTTGATACTCAGGTATGTTAATCCTCTCAGCTTGCTATATTGAATCGGT
TTCTGTTGACTTCTTAAATGTTTATATCTTATAGTGCTTACATCTAATAT
TTCATTAGATTCTTCTAAAGTTGTTATCTAGTTTATTGCATTGTGATCAG
GATTGCAGTCTAAATTTGTAgttaaaaaatacaattttttacaTTAGCTT
TTTATTTCGATCATTTTTAATTCAACTCATTCCTTTTCTTTACCAGATCC
CAACAACAGTTTTGAAAGGTATCgatgttttatttttcactaTTAGTATA
ATGCTTTTTGATTGCATGGGCTTTTCTCTCAACTGCTATATAACCATTCT
TAAAGgtcttatttttacataagtgttcccgtttcataccagacacatat
ttcatatcagcacagtgtctgtctattgttatattatgctgataagcaat
aaatgttgttttttcctctttctgatcagtcttgctccacatctgtgtca
atccaatgtgaaaagctttaaattaaaattgatgaataagcaaacgatat
cactcttatttaaaatattttttgctttctAGGTGATTGTGTCAAGTCTT
CTTTGGTAAGGTGTGTATACTTAATattatgttgttgttttttccatTTG
AAATTCCTTCGCACGCCTTAGGTAAGTTTTCTTTCAGTCTCTGCCTTCAT
TTGAATTTGATAATCGTTTACTCCATGATTGGATTTAAGTAAATTGCTCT
TACTTGAATCTACAAAATTTCTGTTTCAGATACTTTATGCGAAAAATGGG
TTTCCTCTTTATGGGAAATGAGAAAGAAAGTGAATCCAGCATAAAAGATG
TTGTAGAGGTATGTGAGCAAAATGTTAATGAATTCTCAGATGTTACTACT
ACTACTAGTCAATGTGGGATTTCAtgaattcattttattttgttttgaaa
ttgccACTACTTGAACATACAGCGAGATACAGTCATTTAAAGCACAAAAT
CCTGTTATTTAATGATTGATATcaatttttatcttaaaaactGCACTAGA
TCAGACATAATTTCGAGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naaagactcacttttgaatttttttttgcttgaccataaaggacaatcta
attcctacgagttcgaccaaaaataacgatttctaactcaaactgggcat
taccggagggcttcgccctcctatatagcccatgtcgtatatatacgaca
tcggcacttaaagggttaacaaCAATCTCATGCttttaatcaaaagattc
tCTTGGATGCATTGAAAAAGGGGCACAGTATCCTGATACCTACCCGGCCT
TATCAATATGATACTGAACCACAACCAAACATCATGGATTATTGTCTCAA
AGCTCAAAGAAATAAGGGTATGCCTTTTAACtgtagtttagacggcccac
tttttgtCCAGCCTATTCTAATTATGAATTGTGAAGTGGGCAGAAAGTTG
AcagtctaaagtcaatgcattttCCTCCTTTAAACGTTTCAATCTGTTCC
AAGCAAAGGTTTTAACTGCAAAAATTTTGCCAACTTGTTGCCCACTTGTT
GTCAACTTTTttcctactctaacaattaggaATAGACGTCGGCCGTCTAA
CATAGAGCTTTGACACTGAAGTCTTTTAGaataaagtttgaaattttcat
tttccccttGTAGCCATTCAAAGTTTAAAGCAAAAGAAATAACCGTTTAA
AAGATCTGATCTAAAGATACTAAGCTTATAATATAAAAAGGTGCTTGTGA
TTAAAAGGATGGTAGAGGAAATGCTTTGATGGTATCTTTTTTCTCTTAAT
CAGATAGTCGTTTGGGCAGAGCTTTGGTGAGCTGTATCactttatcaaaa
gaaagagtaaGATTCTTGATGAATTTGTTGAAGAACTGTAAGTCCCGAAG
AAAGGTTGGACAAAAGAAGCGAACATTTCTAACAAAAAACTGACGCAAAT
TCCATTTTGTGCCAAGTTTTAAGTGATTATGTTTagacccaggggggggg
ggtactttcGACCCTCAGACCTTTACCGGGactaaaatgaagaaaacaaa
ggaaaattttgtgaattttacgacccttaccgggacaaatttgaccaaat
ttcgatctttccgggggtaaaaagttgaaattttcctatttttccaacca
tttgtgggactgaaatttgattttcagatttttctgacccttaacggaac
tttggaaatccaaaaaaggtacccttaagggcggcacataccgtaccttc
catttgcctaagtaccccccccccgggtgtttAGAACAAACTTTGATAGA
AATGTCTTCCAAGGAAGCTTCTCACTCATCAAGCAATACTTCTGACTCAT
ACATTTGAAAGTTTCACATGTTTGAGGCTATTGTATGGCGTCATGaaact
attttattttcagaCACAATCAGCCTGATTATCTATTACTAGGTATTTTC
ATCTGAGGATGGATCTTTTACACTGAAGACTCTTATCTTTTCGTTGTGGA
GAAGCGTTTCCAATTTTGGTCTACTGCATATAAACGTTTCAAGATGTGTC
AAATTGAAGGTAAaattttttctatctttttgtaCAATCGGAATTTTTAT
AACCCAGGTATCAAAAAAACTGCGTACGTTTGATGGTCAAGATCAGGCCT
TGCTTTGAGCCCAATGTTAATTTTATTATAAAGTTGTCAGTCTcacttaa
atttttctgaatgatttttttttaaatttgatcaagTTGAGCTTTCAAGT
CATACGCCtttaatttaaaattcaaatttcagaaTGTGTAAAAATGCACC
AAAATAAGGGGtcttatatttcattttttttcgctTGGTATGTTTTTTTT
GGTTAAATCCAACTCGTAGTTGCAATTTAGACCATCCGATAAGAAAGCAA
GGTGTAAAATATAGGATTAGGAAAATAGAAGAAAAGTTGATTGTTTCTTg
cataaaactttttaaaaagaaaatttaagtgGAGTATATCGTTTTCTTCT
GATTGATTTTTCAGTCGTTGGTAAGAGCTGCAAAAGATTTGAACCAACAA
GAAGAAGTTCATGAAGAAAACAATCTCATCTCAAGACATCTCAACTTTGG
TAAGCTTAAGAACTTTAAAAAtcagccaaattaaatttttcctaAAATGT
AGATTACTATAGGTTTGAgtttatcgacccagtgatattcatatttgaag
tttatcgtggcttggatcatgagatttacgtttggctatcgtaaaatcgt
aaaaacgtAAATCTCGTCATCCAAGCTACGATAAACTTCAAATATGAAGA
TTACTATCGTTAGtttgtttaatgtttttttttctgttccaCCTTCAGAC
ATGTTGGAAACACAAAACATCTTACCTGTACACATTGTATCATGTTTGTT
GTGTACCAAGTACCGTCTCACAAAAGGGGTCTCGTTAGAAGATTTGTCGA
AGGATGTTGAAGCATGGACGGAAAAACTGAAAGAAATGTCTAAGTATGTT
CATACatctatccgcagacacgtgtttcgtccttcccaggactcatTAGT
GCGGCTCGTGTAAGTGAGCATAGACTGTTGTTTtcaccagagtgctcaaa
acactaagTGTTGAGCTTTGCATAATCGCNaaaactttttaaaaagaaaa
tttaagtgGAGTATATCGTTTTCTTCTGATTGATTTTTCAGTCGTTGGTA
AGAGCTGCAAAAGATTTGAACCAACAAGAAGAAGTTCATGAAGAAAACAA
TCTCATCTCAAGACATCTCAACTTTGGTAAGCTTAAGAACTTTAAAAAtc
agccaaattaaatttttcctaAAATGTAGATTACTATAGGTTTGAgttta
tcgacccagtgatattcatatttgaagtttatcgtggcttggatcatgag
atttacgtttggctatcGTAAAANcgggttttttggactttgtgaaaaat
tggatcattaattttttttgattttttgcatgaaagtagggtaccatcat
aggtaaaagatggcttaagcagaattttgcaaaaaaatttttttggctca
aaaaacgcatgtttatctataagaattactattaataagcatacatcaat
gttcttagtcaaatactcaatttttatatgagatagatgtttttttgctc
acgagggcttacttttgaagaatatgtgtgtttttaGTTGCTTGGCGTgc
tcttatagaaaaactggccaaattcgatattttttataagcacattatca
attacttaggtattagcttttcttctcgagattggctttttcattcttta
tgatattttgcacaaagatgcataactataaaccttcgaatgtgacggag
tctgattttgaaataaaaatgttattgggcaaatttgggccaaaaaacgg
ctaaaaaacgggtttttgggcttcgtgaaaaattggatcattgatttttt
gcatgaaagtaggtaaaagatggctcaggcagatttttgtaaaaaaagaa
tttttcggctcaaaaaacactcaagaatcactattaataagcatacatca
atgttcttagccgaattactcaattttttgatgagatagatgtttttttt
tgctcacaaagtcttgaatatgaaagaatatttcaagagtatgacatttt
ggtttctaaacgttttttttataagaaacaaacgactaatttaaatagat
cgtcactatttgtgttctgaatgattgtttaatggtcaggtcacgtagat
atcaattataaatgtgttaaatgcataaccaggtaggtccataaaagtat
cacttgtttattgTTAGAATTCTTTAGTAAGCCCCTTTTTTACGGTAAGA
GTGTTTCAGGCACtacaatagatcttatcggagttttgatttttccaaaa
aaaacacgatgcattgtgggattctttcgggggtattacaatagaaatct
cttaggaattccttgagggaattctattgtaatacccccgaaacaatccc
acaatgcatcgctgttttagaaaaatcaaaaactctgataaggtctATTA
CTTTGAACATTGATCCGGGGTTTAGATCAGATCATTGGCCGTCGTATATC
GAAAGGAATATCCAACCTGTCAAAAAAACTCTTTGCAGGGAAGAGAAACT
TCCTTATCCGCCTCGCAAGGCTAGTAGATAAAAAGTTTTCTTACATAATT
TCTTGTTTATGCTAACTGCGGTTCTCAAACTATCCTTACTTACTTTAAAC
TGTTTCTAGGAACATTGGTTTCTGCGGTGAACCTATCGACATAACATCGC
ACGCTATACAACTTCTTCACCAGCAAGATTTGATCACGGTTCATGAAGTC
GACAATAAGATCAAACCAAAATTATCAACCATCAAGCAAGCATCCTTATT
TTATCAACACTCTCTGAAAGTAAGGATTTCCTTGTTCGTTTAGAATGAAG
CAAATCAACTTTTTTGAATGCCTGTATGGTTTACTCATGTTACGGTGATC
GGAGTCATTAGATCAAATGAAATTCTTAACCCATTAAGTGCCATCACTCT
ATTGCTACGTACACACCCCGAGCGGGATCAAAAACAGGGCGGCATTGGTT
GCGACGCTCCTAAGACCTACAGACCTTACGATTCGTAAATCTTTCGTCAG
TCAATTTTCTTTAGTTCATGGTCATACGAAACCTctttttgaagactttt
ttaATTTAGCTTCTCCTCTTTTCCTCTTCAGATGGTGCATACATTCATGA
CAAGGGCAGTTCTAGGTAAAGTTCTTTGCTTACGtataaaatttcttttc
ctGAAGATTTATAGAACAAATTTCTTTACTAATGAGCCAAATTTTCATTA
CTCCTTCTGGCTCCTTCATTCTTCATATGTCTTAAGGTTTTAACGTTATA
AATTTTTCTAGACTTTTGgtgcaatttttttattatattcgGTTTATGTT
TGCCTCGATATTCTTGTTATTGTAAGACTGAAAGGCATAGTGCTGTGACA
AACGTCCTATTCTTTTTTTGCGACGTAATTATTTTTATACGTTGACTTTT
TTTACAGCTTGTACGATCATTTCTGAATGTGGTGGTGAAAAAATCTTGAG
ATTTCCAAGTACACATCAAATAACCTTTATTGGAAGCAAGGTATAGAATG
ACTTGTAGCGAATGATTTTTTACAGCTTTTTCATGGTTAAGAGGCTGATA
TCATTTGAGTGTATTTCAGTTTGAGCGTTTTCACTGAGTGTTTATCGATT
CGGCGAATTGGATCATTCTCAGGCTTTTTGACCCTGTATTTCATATAAAA
CCTTTTATTACTTTAGATACTGACTGATTGTTTCTGTTTTTGTCTTATTC
AGATTTTGGAGAAAGCAGAATTTTTGAGTGAAATGGTTTCTTTCCTACTT
GATTACCATTGTGTGAGTACATAAATctattttgttaattttccaACGTC
ATATAAATTTTCGATTAGGTATTAAGTAACGTGTCACTATAAGAATGCTC
TACGCTAAGTAAGAGAAGCGAGGACAAATTAGGACAATTTTTTCAACCTA
TAACGTTACGACTGTGGTGTtacaaaaatgtattttgttCATCTGAAGAC
CAAGAATTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAATTTCTCAAAAAGACtttgcttttgtt
ttcatttgagtACTCTTTATTTTTCATAAGCCATTCAATCAAATTTCGGA
CTCCTTGACGTCGACAATGGATCATTTTGTTGCTATGGGCTACATCAAAA
TGCAAGAGGTGAGTAAATACGAAATGTAATTCGACGGTATCGAGAACGCT
GTTAGCCTTGCTAACTAGTATTAACTTGTTATTATCCCTTGCAtctttta
ttcagttttttattcAACATTTAAGATTGTTTTCCCTTTGGAAAATTCAT
GATACTTTCTTTTTATGTgaacttaaaaatgaattatctcgagatctaga
catcgaatGTTAACAaatcatgaaaatgaaaaatgaaaatgctgacgtca
tcggaaaacgcccaaaacgtcgatttttcgccttaaaaatgccatttctc
ggcaccaggtggtcgaaacttaacaaataaccccattttctttatctact
tttcacgctgaatctgTTGGTtgcctcagatatttgattttcagacttcg
aaaaaaccgttagtaaaggggggacccttgataagttcaatcgattaact
aaaaatcgattcactcgaaaactgcaggagattcgaagggcaaattcttt
ttgtcaattctacaccatattaggagcataataccgaaaatttgccctga
tctaaggggtgccctacgaaaaccatttttaaggccttttttgaatctcg
gacgctggtctatcTTGTTCGATTCTGCATCATTTTAACCAGAGTGTATT
GGAACTTGACGTTAAACTAATAGTCTTACTCGAGGCTTTCTGTAATTTGA
AGCCTCTAAAGAACTTTCTTGGTCCCTtcaggttcgaattagagagtatc
AACTTTACATTTTGTCTTTTAGACGGGTTTTATGGACAACTATCATCAAC
GGTTAGCTCGTTGTGCACAAATCAACAGTGCCCTTGGTGAAGAAGATTTT
GATGGGCGGAACAATGAAATCATCTATGAGGTAAATGTGATGTTCTTTTT
TTCGTGTTTGTATCGTTTTCATTTAGGGTAAATTATTTCATGTCAAAGCT
ATCCCATCTTGTATCATAACCAATTTCATTGTTAAGGAGACAAAAATCCG
CTTCAAAAGTATGATCGTGAGTTCGAGCATTCTTAGCTTCTATCACTCCA
GAATGGTTATGTATTGTTTATTTACAACTGCAGTGGCTTCTACTTTGTGT
TTAAACCTTTTCTAATCAATAACTATACAATCTCTGAATTTTTTCACCTT
CTATAGTTGGTGATGCATGAAGATTTGCTGACGTATCATCAATTTCTTCA
ACCTTTCGTGCAATTATCTTTCACAGTGCTTGCCCTCATCAAAGAGCAAT
TTTCAGGTGAAAGTAGTCCACTTTAAAAATTAATCTTCACACTTGGTTCG
ATAGCAGCATTTTATATATTGCAATTCTCAAAGTTNGATTCGTAATCTTC
ACACTTGATTCGAGCATTTTATATATTGCAATTCTCAAAGTTCTTTCATC
TCAAAGGGATTTCTGTATCAAAATTCATCACGAAAAGAAGTGTCTTGGTG
AGCTTTGCTGAGTAGAATCGACGTTGCGTCTAAAATGGAAATTCTACTTT
TTCTACGttgagaaaatatttgaagccgCTATCCGTTAAGGATGAACTAT
GAAACTATTCATGAAAAGGAGGGGAACTTCGGCGCTTACGACTTATAACA
CCCGGCATTGCAATTTGTCTGTATGCGTATTCTCGAAGTTTCGGATATCC
ATGTTAATCAAAGCTCCAAATTTCATTCCAGATGAATTGTTTCAAGTGAG
TGGTATCTATACAAAAGTGGAAGAAAGATACAACACTGGTTTCTTTAAGT
ACGGTAAGACtggtgtttgtttgtttgttttcaccagGAGCTTTACTTCA
TTGTGGTTTGTAATTAAGATCTGAAGAGTGAGGTTGGAATACGATTAGGT
TATCTACGTATAGTTGGATAAAGAAGAATGATATACGAGTGATAAGGCAT
GTCATTGTCGATGCATTGATTGTGTAGACTCAATTTTGTTTAAGTTAGTC
TTGGGTTAACAGGTATTTCAAACTCTCTCATCTTTTAAAAAGTTCACTCA
ATTTAAATTAAAACATTTCCGctggaaataaaaatttccgaAAAGTTTGA
GAGACGAAACAAACTGTCCGCTCAAAAAGGCCCTGTAAAAAATCGCTGAT
CATGCGCCAACTTGTTTTTGCTCTATTTCAAAAAGGCGGTACCTAAAAGC
ACTATCCAGACTCTAGTCGTTTTGGCGCGTTTGATCGTCAAGCAAACTAT
TGGAAAAATAGCTTTAAGTACTGAAATTTCACGGATATCGATAATctgta
aaaaaaatcttttcccgaTCTTGTTTGCGTACAGGGGAAATGGTGCACAT
GGAGTTTGTGTCTCGTTTCTGTGATTACCTTTTCGAAATGGAGGTTGTAG
ACGATGAAAAAGATTGGTACAAATTGTCCCAGGATTATCGAACCAATGAC
GAACTTCTACTGTACTTGCAGAGAATCGCAAAATTTCGTGCTTAAAGACA
TGTTTTATTGTTGGCAGACTGTAAGTGAGAAATTGTTGTTTTTACACATA
TTTAACTCAAGtgtaggtttttttttaaactgatcaaaaacgaaaattta
gcaaaatctaAAGGGACCTAttcaaaagttgtttttatatgtggagatgt
ttttataaatattttttatgagaaatattatctttttgaaaattgaactt
TCATTTTGTGAGTTTTTCTTGACCTTTTTGTTCCGCCGGAAATTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033706XLOC_033706Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053394-exon-scaffold_23-1491911889:16556..16750TCONS_00053394-exon-scaffold_23-1491911889:16556..16750Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:16556..16750TCONS_00053394-exon-scaffold_23-1510915933:16556..16750Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:16556..16750TCONS_00053394-exon-scaffold_23-1575043694:16556..16750Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:16950..17060TCONS_00053394-exon-scaffold_23-1491911889:16950..17060Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:16950..17060TCONS_00053394-exon-scaffold_23-1510915933:16950..17060Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:16950..17060TCONS_00053394-exon-scaffold_23-1575043694:16950..17060Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:17451..17536TCONS_00053394-exon-scaffold_23-1491911889:17451..17536Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:17451..17536TCONS_00053394-exon-scaffold_23-1510915933:17451..17536Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:17451..17536TCONS_00053394-exon-scaffold_23-1575043694:17451..17536Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:17746..17819TCONS_00053394-exon-scaffold_23-1491911889:17746..17819Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:17746..17819TCONS_00053394-exon-scaffold_23-1510915933:17746..17819Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:17746..17819TCONS_00053394-exon-scaffold_23-1575043694:17746..17819Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:18722..18818TCONS_00053394-exon-scaffold_23-1491911889:18722..18818Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:18722..18818TCONS_00053394-exon-scaffold_23-1510915933:18722..18818Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:18722..18818TCONS_00053394-exon-scaffold_23-1575043694:18722..18818Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:19079..19168TCONS_00053394-exon-scaffold_23-1491911889:19079..19168Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:19079..19168TCONS_00053394-exon-scaffold_23-1510915933:19079..19168Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:19079..19168TCONS_00053394-exon-scaffold_23-1575043694:19079..19168Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:19402..19423TCONS_00053394-exon-scaffold_23-1491911889:19402..19423Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:19402..19423TCONS_00053394-exon-scaffold_23-1510915933:19402..19423Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:19402..19423TCONS_00053394-exon-scaffold_23-1575043694:19402..19423Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:19738..19765TCONS_00053394-exon-scaffold_23-1491911889:19738..19765Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:19738..19765TCONS_00053394-exon-scaffold_23-1510915933:19738..19765Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:19738..19765TCONS_00053394-exon-scaffold_23-1575043694:19738..19765Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:19935..20013TCONS_00053394-exon-scaffold_23-1491911889:19935..20013Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:19935..20013TCONS_00053394-exon-scaffold_23-1510915933:19935..20013Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:19935..20013TCONS_00053394-exon-scaffold_23-1575043694:19935..20013Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:21152..21272TCONS_00053394-exon-scaffold_23-1491911889:21152..21272Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:21152..21272TCONS_00053394-exon-scaffold_23-1510915933:21152..21272Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:21152..21272TCONS_00053394-exon-scaffold_23-1575043694:21152..21272Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:21709..21761TCONS_00053394-exon-scaffold_23-1491911889:21709..21761Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:21709..21761TCONS_00053394-exon-scaffold_23-1510915933:21709..21761Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:21709..21761TCONS_00053394-exon-scaffold_23-1575043694:21709..21761Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:22348..22464TCONS_00053394-exon-scaffold_23-1491911889:22348..22464Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:22348..22464TCONS_00053394-exon-scaffold_23-1510915933:22348..22464Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:22348..22464TCONS_00053394-exon-scaffold_23-1575043694:22348..22464Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:22920..23004TCONS_00053394-exon-scaffold_23-1491911889:22920..23004Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:22920..23004TCONS_00053394-exon-scaffold_23-1510915933:22920..23004Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:22920..23004TCONS_00053394-exon-scaffold_23-1575043694:22920..23004Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:23254..23398TCONS_00053394-exon-scaffold_23-1491911889:23254..23398Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:23254..23398TCONS_00053394-exon-scaffold_23-1510915933:23254..23398Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:23254..23398TCONS_00053394-exon-scaffold_23-1575043694:23254..23398Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:25165..25324TCONS_00053394-exon-scaffold_23-1491911889:25165..25324Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:25165..25324TCONS_00053394-exon-scaffold_23-1510915933:25165..25324Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:25165..25324TCONS_00053394-exon-scaffold_23-1575043694:25165..25324Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:25637..25670TCONS_00053394-exon-scaffold_23-1491911889:25637..25670Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:25637..25670TCONS_00053394-exon-scaffold_23-1510915933:25637..25670Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:25637..25670TCONS_00053394-exon-scaffold_23-1575043694:25637..25670Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:25963..26045TCONS_00053394-exon-scaffold_23-1491911889:25963..26045Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:25963..26045TCONS_00053394-exon-scaffold_23-1510915933:25963..26045Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:25963..26045TCONS_00053394-exon-scaffold_23-1575043694:25963..26045Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:26258..26317TCONS_00053394-exon-scaffold_23-1491911889:26258..26317Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:26258..26317TCONS_00053394-exon-scaffold_23-1510915933:26258..26317Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:26258..26317TCONS_00053394-exon-scaffold_23-1575043694:26258..26317Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:27036..27113TCONS_00053394-exon-scaffold_23-1491911889:27036..27113Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:27036..27113TCONS_00053394-exon-scaffold_23-1510915933:27036..27113Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:27036..27113TCONS_00053394-exon-scaffold_23-1575043694:27036..27113Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:27878..27985TCONS_00053394-exon-scaffold_23-1491911889:27878..27985Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:27878..27985TCONS_00053394-exon-scaffold_23-1510915933:27878..27985Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:27878..27985TCONS_00053394-exon-scaffold_23-1575043694:27878..27985Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:28262..28361TCONS_00053394-exon-scaffold_23-1491911889:28262..28361Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:28262..28361TCONS_00053394-exon-scaffold_23-1510915933:28262..28361Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:28262..28361TCONS_00053394-exon-scaffold_23-1575043694:28262..28361Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:28787..28858TCONS_00053394-exon-scaffold_23-1491911889:28787..28858Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:28787..28858TCONS_00053394-exon-scaffold_23-1510915933:28787..28858Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:28787..28858TCONS_00053394-exon-scaffold_23-1575043694:28787..28858Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1491911889:29390..29801TCONS_00053394-exon-scaffold_23-1491911889:29390..29801Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1510915933:29390..29801TCONS_00053394-exon-scaffold_23-1510915933:29390..29801Clytia hemisphaericaexon
TCONS_00053394-exon-scaffold_23-1575043694:29390..29801TCONS_00053394-exon-scaffold_23-1575043694:29390..29801Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:16556..29801 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.50085	4.36585	1.61097	0.701776	2.51942	1.23125	3.18724	2.32781	5.56682	5.82862	2.35519	5.85948	5.552	4.59045	3.65413	4.69675	7.30593	6.25329	2.52218	2.54652	3.79642	4.07173	8.74837	7.53685	3.64314	6.23972	2.00767	2.09406	6.10616	6.56056
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053394 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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