TCONS_00053527 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053527
Unique NameTCONS_00053527
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length761

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053527 ID=TCONS_00053527|Name=TCONS_00053527|organism=Clytia hemisphaerica|type=transcript|length=761bp
TAAAGGAGCCACTTTCAAAATCCCATTCTCCAAGGTAACCAGCATCACAC
ACGGGACCAGTTTACCAAAAGAAGACATCAGGTCGAACGCTCTTCCTACA
CGTCAATTCGTTGTGGAGTATCAGTTGGAAAATAGTAAAGGTGAAAACGT
CAAATCGAGGCTACATTTCACTATGGAAACAAAGAAAGCAGCAAAGGACT
GGGCTGAGGGTTTACAATACCTACAAATGTACATGGGGTCTGTTCAAATC
GAGAATTCGTTACGCCCAGCATGGCTACGTAACGCTTTTGATAAATTTGA
CCACGATAACAATGGTGCACTCACACTCACCGAGATAAAAAATCTACTCA
CTTATTGTAATGTCAAAATTGACGAGAGCAAAGCTGAGGAAACTTTTAAG
AAACACAGTAACGAAAGTTTCGGCAGACTTCCACCAATGAAGTTCTCAGA
ATTCTTTTATGAACTTGTATCACTCAGAAGACAAAGCTTTATATTTGAAA
GATATTTGACGGACAATAAAAAGACATGGAACACGCAAAACATATACGAT
TTTCTTAAGAACGAACAAAAGATCGAGAATCCAGACCCTTTAGACTGTGG
ATACATTATGAATAAATATGGAATCAAAAATTCAGAACAAGAAGACTCGA
AAGCTGAACTTGATCTTATAGGGTAATACGCGAAATGTGATTCACAGGAC
CAATTTGTAAAATCATTAGCGAAAGACGTTGTAAAAAAACAAGATTATTA
CTATCACGCGT
Run BLAST on NCBI

transcript from alignment at scaffold_233:26226..38538+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053527 ID=TCONS_00053527|Name=TCONS_00053527|organism=Clytia hemisphaerica|type=transcript|length=12313bp|location=Sequence derived from alignment at scaffold_233:26226..38538+ (Clytia hemisphaerica)
TAAAGGAGCCACTTTCAAAAGTAAGTCCAGGTTCATGAGCTGTCACTCTG
ACCTATCATCTTATAACAAAGCATTTCGTTATGAACCTTTCAGTAAAGGA
GCCACTTTCAAAAGTAAGTCTAGGTCACCACCAGTACTTCATCCCCATAT
CCCTATATTACTTTCTGAGTGAACTTTGTTAACATAGTAACTCTGATGTT
GCTAAATGAAGCTTAGTTGGTTGTTTGAGCAGATCCTACTGTGTTATGAC
TGATGTTCAATTTCGGCCACAAATCACTGTCACAAAATCTACCAACGGTG
ATCATATATTTgtgtaaaattgacttaaatgaCAGAAGCTTTTCCATGCT
NAATCTATCAACGGTGATCACATATTTgtgtaaaattgacttaaatgaCA
GAAGCTTTTCCGCATGGAAATCTTCACTAACGGTAAACTTTGGAATTCTT
CTCTTTAGTCCCATTCTCCAAGGTAACCAGCATCACACACGGGACCAGTT
TACCAAAAGAAGACATCAGGTCGAACGCTCTTCCTACACGTCAATTCGTT
GTGGAGTATCAGTTGGAAAATAGTAAAGGTGAAAACGTCAAATCGAGGCT
ACATTTCACTATGGAAACAAAGAAAGCAGCAAAGGACTGGGCTGAGGGTT
TACAATACCTACAAATGTACATGGGGTGTAAGTATatctttcaatttctt
ctttttaacaTCTTATTGTAGGCgcacacgcttttttttataagaatata
ctttttataagaatatttatgatgaaattggccaaaaaattaaaaatatg
gtATTCAACTAAACctaagaatttcatttttagaccATTAAATTGGCAAA
TATTACCAAGCAATGCTAAAAGGTTCAACAAAAATGCTAATTTGTTGCCC
GAGGTATGCTAGATTTTGGCTTGAATTGAAtccaaacctaagaatacctt
aagaatatttcaggataattttcctcaaaaattcaagaatatacatcatg
aaatgaaaaaacaccgttcttataaaaataaaaacgtaTATAGACCttta
cgtcacgagcaacgcttacctcgttttcaaaatattgctattgtAGTTAA
TGCCCAGAGGAGTTCATAAAAAGTCACTCTATTTAAAATTTAACACTTGA
AGACTCAAGGAATTTAATCACCttgtaatggtttcaaaacgaggcagtcg
ttgctCTCCAAATTATTTTATGAAAAGACGTATTAGTGTAGTGTTTATCG
TTCTATACTACCTCCGAGAAGGTCAGGGTTTGATTGCTGCTCGGTGCTAC
TTTTCGATTtacaagtgaatgtaccttcgcccgggtcaataTATATCATT
TGAGGGGAATTAGGTATCACATTCTGATATTAGAGTATGCGGAGGTATGC
AAGACATACACGAGGTCGTGACGCTGTTCACATGAATGGTCCACGCGTGG
TACATGCTAGCGCCTTACCAGAAAtcgatttcttttcttttttatgcttt
ttaCCTGCCCTCGGAGAAAGTTAGAAAGGCCACCCTTACCATTGTGCATT
GACACTTTCTtttcatagtgtgcagaggggtctacccccccccattttta
tttcaCCCCCCCcctatttgaaaacattttcgaaCCTGCGCTATTGACAA
GAGCAGTCCACCAGtcattcaaaaccaaaaacattgaaaaatctaaatca
atataaatatGACTGATATTTTGATCAAAAGTTGttatcccccctatttt
tacttgacccccccccctaaaatcttaaacccccattttttttcggaaaa
cctCCTACCCCCGTATAAAGCATATTTGGAAAAGTTGGATCCCCTTTAAA
AGGGGTTCACACTACATGCTTATACTTTGATTTCCCCTTTCATTCAACAG
AGGTTCAATGTCACTTTAATGAATTCAAGATTCGGGAAATTTTTGTATTG
CGCGAGATCGACTTTgtgaatacactcttctcgagatgcataaatttatt
gttgtcctcgttttcaaacagatttcattgctatacaATTatatattcac
aatgataattgtgttggttacacctcatgagacattttgaatttcaagta
cttttgttttagagttaatgtttgccttttgggaattcaaattggtttaa
atgtataatttcatagcaatgaaatctgtttgaaaacgaggacagcaata
aatttatgcatctcgagaagagtgtattgtgCTTAATTCAAAATgttagt
ttgagtaaagaaaacaattcaagttaatttcatactcaaagtttcatgcc
atccaggatggcaatcttcagtgaaataattcaaaatattcagatgagat
ggagtttttataagatactttaatacttggtcatttgaagtaataaaaat
gacgcgttctttagaaaaagtaataagattgttttattacaggttaatga
ccaaccaaatcaattAAAAGCTTCTAAAAACTCCACCTCGTcctcaaaat
tttttatggaaaGAAAGAGTTTGTCAGAACGTTCCGACGGAttgattttt
ttcgaattagtTCTATTGCTTATTCGCGTTTGTTTCTgtaaaagtgaaat
tttattgttgtgGATAAAATATCCCACCATACCATAAAAATATCACTTGT
TTCTCTTTACAGCTGTTCAAATCGAGAATTCGTTACGCCCAGCATGGCTA
CGTAACGCTTTTGATAAATTTGACCACGATAACAATGGTGCACTCACACT
CACCGAGATAAAAAATCTACTCACTTATTGTAATGTCAAAATTGACGAGA
GCAAAGCTGAGGAAACTTTTAAGGTATGTTTGTTAAGTACATTCTTTACC
AGTAGCGTTCTGACAagctgacctttatataccctggaccaagcttctca
attcccagccaagcaaaatctttgatcggagttttttaaaaagtggtacc
ctaatggcgggcgacactactcgatagcggtgtaaatgcatcgacaactc
caatcaaagatggcgggtaTTGCTTGGTCTAGGGATATATAACGGTCAGT
GGTTCTGACAAGCTGACAGGGAAAAGTTCGTTAAAAAATTCGACGAGTGA
CGTGGATCGAGATATTTGAGATGCTACATTTtctcatagtgtcctccccc
acccccttttaaaagggggtgggggaatttttttttcagaaaataggaaa
aggggggggggcaaaatggttttcaaaaatctagggggggggggaaaaaa
tgGCCCCAAAAAGGCTAGGGGGGAGAAAAAATGGCCCCAAAAAGGCTAGG
GGGGAGAAAAAATGGCCCCAAAAAGGCTAGGGGGGAGAAAAAATGGCCCC
AAAAAGGCTAGGGGGGAGAAAAAATGGCCCCAAAAAGGCTAGGGGGGAGA
AAAAATGGCCCCAAAAAGGCTAGGGGGGAGAAAAAATGGCCCCAAAAAGG
CTAGGGGGGAGAAAAAATCTGGggacattatttttttctactgtggaaaa
atattttttctactcTCTGTAGCTAACTTTGTCTAAACTAACATCTAAAA
AATATACGCTTTGTAAATAAATTGATTAGAAGTTATCTTTCACTAGCAgt
ttatttttaacttttcatttcactctgtggaaacttttttttcaattttt
cattgtatATATAACAGAGATAACGTGAATAGAAGCAtcaatttggtatt
tttagacgtttttgatatacagtttttgaaaaaaatctgaaaaatctaca
aaagcgccaatttttataaaaactagtctttttttaaacaaaaattactt
ttaaaggtgtttttattaatcattaatgtcataaaactccttaaataagt
caatttgtaagtgattttctaattgattgcataaatttaatacctctttt
ttacgtgttttttacactttccgaaaagtgaattttgtctttaaaagctc
ataagtagagaacaagttggtcaaatttaaaaagtgatagctcaaatctt
aagttaggatatctaccttctaaatatcaaaactccaagcactttgggac
atttgttcgacctcaagatgtcgggaaacgtctgaactttttcgtgggtc
acccggtatatctTCTACTTTTCGGATGAAATTTCGTTATAaattctgtc
tcaaaataatttgcagcggagacaaaaaaggctacCTTATCgcccaaaac
ttagtcggccttaattattagtcggccctgaTTTTAGACAACTCGTCAAa
atagggccgactaataattaagaccgactaaagtcaccaagccaaaattt
agtcacttagggccgactaagttttggccaataaggtataacttttgata
gacatcGAATTAGATAggggttttgtgcttgttgaaaagacagACAGAAG
TGGAATATATCAAAAAAccaaaatcaacttcttcaataaatgtgctataa
ttatcattattttcacacgagtgattctttgatcttagaacatcatcaat
gtgaaaataactttcaaaaaacttttttcaatcgaAAGATATAGTCGAAA
GTTTTATCTCTAATTGGCTTCAAAAACcaccaaaaacaacaaaaaagagc
ccttttaagtcaaccagggcaaagttttaagctgtattttttgactgaat
aaaaaagattttttgagttttttttttcgcatttatgacgttctaagatt
gaagaatctcTGATATAGAAATGATgatcatagcattattctatAAGAAG
ttgacttttttcttcttcgtttttcatctttatttttccatttttttaaa
tattttcttttttgacgatGTTCCACCCTGGATTATCTTttaaacgagca
caaaaccgttttctaattcgaattctatcaaaagttacagccttttttgt
ctccgctgcaaattatattgagacagacttttaaTACTGTGCTCGATTTG
ATTTTGGTTTTGTTTGGCAATAAAAGAGGCGGTTGATacaggcacgacgc
aacgggtacggcaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNaaatacccgaagttttcctcttcgtcggtcaaatcgcta
taaaatcgcttaaatttcctcattcaccgtaccagatataaaaagcttcc
gtcgtgcctgggTTGTAGTTGATGCTAACTAGATCATGTTTCCAGTTACC
ATATTTACTTTATAAAAGTAATTTagcattaatttttgaaaaaaatcaaa
tttttcttcactTCTTAGAAACACAGTAACGAAAGTTTCGGCAGACTTCC
ACCAATGAAGTTCTCAGAATTCTTTTATGAACTTGTATCACTCAGAAGAC
AAAGCTTTATATTTGAAAGGTAAATCCATTCGGTCtaatatactttaatc
gtagaaattttagcgagacaaattttagtgttttagcgagttttccctat
tttcgctaaaataaatctcgctaaaacatgccgaatcgacagatcgctaa
aatttatccgcgcgaaatttttggttatattgccttgatgcatttttatc
aataggaagggtttcagtgcaaagaaatgctagaaaacgaattaaGTCAT
TAATGTAATatatcgtgattcgctaaaataaatccaaaaaaaatcaagat
tttcctgactcgctaatatacgcttaaattagtctcgctaaaatttctac
gattaaatatgtctaatcttataaaaaatcgtcCATATTTCCAGCGCCAC
TCGCCAAGTTTTGGAAGACTGTGTTAACGTTTgccttgaaaacgaaagtg
attggGTTCTCAAGTTGATGAGCATTTGCCGAGTGGTCAAGGCGTCAGCG
CCGGAAACCAGGCTTTTTGGTTCGAATCACGGCTCCTTCCAATGTCCGGT
TCTGTTCATAGATATCGGAGCCGGCTGGCGGTGGACCATGGAAAAATAGT
CGATAGATcttctaaaagtcctagattactgggctgtCCACCTTTTAAAT
CGACTTCTTCCATTTTTTGATTACGTTTTTGATTGACAATAGATTTTCGT
TCATTTGTTTAAATTCAACCAGTGCTTTTTTATAGCCTCATTTGTTATCC
ATCAAAGTTtggataaaaaatttcaaagtggacATCCAACTGATTCTACT
GGTTATTTATATACAGTGGTAACATATTTATAGTGGCTGGCCATggaata
attttcaaacttttaggcagtttgaaaattttctcaccCAGGGGCCACTT
TGGGGGAAggggtagactggagtcgtttataatgcgtgtaatactaataa
taccaatactaataataatacgggatttagtttgtataaacgactggaag
aatccggtgttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAGTTgatgcacaaaggtttctagacgactaaa
attgttccattcattactttttgctttatttctactatgtataaattagt
cgtctagcttgctagactagggAACGGGACATGAACGGTAAAAGTAACAA
GAACAAGAACGAGAaaaaagaacaggataagaaatAAAACAACACCGTTT
GATTAGTCGAGAAAGTGCTTTTCAATTGAATTTCTGAACTGGAATATCGA
TTTGGTAGTTTTGATTTCAGTTGGGAGGTTATTCCATAATAAAGAGCCAG
AATTAATAAATGTTTGATCAGTGAAATGAGTCAAGAaaagttatggagta
aggtttataggACATCGTTGACTGAAGGGACGACAAAACTTGATTGAGTA
ATTGTACATTGTAGtatatttttcatctttcttcGATCTGCAGATATTTG
ACGGACAATAAAAAGACATGGAACACGCAAAACATATACGATTTTCTTAA
GAACGAACAAAAGGTATCTATCTCAGAGACATTTTCTGATTTtgttattc
tcaacttcagttgagctggAACCTGAGAATCTGTGTCTGTATGTTTGTCT
GTCACCTCAAAACTTTGGGGACCAAAAATTGTCTGGTTCGGAAATTTTGC
ACACGTTTGTTCCTTGGGTATGGGgatgtttattttcattttttcaaaat
tttgatttttagggacGCACTTGTgccttgggtaaatatctgggggtgtt
ttttttttcatttttctaaaattttcatttaaagggtgtgcccagccggc
acacaacgtcaaaacaacgtccatttgacatacataacgtccaaataacg
ttatttgaacgttaaaacaacgttgtgtgctagctgggtgaccacgagtt
tttcgccaaaacgaggatAAAGCTTTTGTGGCAAGCTGGAAACTTCAAAA
GTGGTCCGATTTGCCTGAAATTTGGCATACTTGTTCCTTGGCTAAattct
gggggtgttttttttcttcattttttcaaaattttcatttaatgGGCGTG
AtcacgagtttttcaccaaaacgaggctagaaCTTTTGTGAAAGTGAGGC
CAAAGGTCAGCTAGGTTATGTCCTTGTGTCCTTTTTTCAAATGTGTGAAC
TTATCACTAAAGAGCTTGGTTTTAGTTTACAAAGTATCTGGCAATTTGGT
GTTTTTAGAGTCTGCGAAGTcttggaatgttcttaacttgttcttgatat
tttgaccatcgaaacctaatgttcttatacagtttgttctcATTAAAAAC
CATGCATTGAATGATTCTTCATCCTGTTCTTCTTCGTTTAGATCGAGAAT
CCAGACCCTTTAGACTGTGGATACATTATGAATAAATATGGAATCAAAAA
TTCAGAACAAGAAGACTCGAAAGCTGAACTTGATCTTATAGGTATGTTCC
GattatttgattgattgataaaacCAGTTTGTACTTAGTTTGTACTTAGT
TTGTACTTAGTTTAAATCACTACAAAACTACAGGTAGTATAAAAGCCAGT
CTCCACTTTCACGTGAAATGggtgacagtttttttcttaacctttttttg
cctggagaaaagattacgtcataaaaaagtttcgcgcgaacaaaaaaatt
tgaaggaagttcattttgaccaatggaaattttgcttcaattttcaaccg
accaatgaccttacaaaaaagtcaaaatgtttCCGCTCATGTCgcacgaa
agtggagaccggtctTAAGGAGCATGAatggggacgagatggagttttta
caaggtcttatttgatttggttggtcgttaaccagtgataaaacaatttt
gttactttttctaaagaacgcgtcatttttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcaaaa
gtcacgaaaaaacgtcgagtaaacaaacttttgattggtggaggcatgca
aagattacctcatactctggacattttgaaaaatatgcttgtatatgaaa
tatttcagccaatcagagactttTTCGGCGTTTTTCGTGACTCTTTTACA
TGAATCCGCTAATAGGAGATACGTGTATTTCCATACAGGCGGGTAGACGA
AGCTTTTTAAGGAGTATGAATCCGTTTGTGGATGCTAGCAGCCTAGTTTG
TACTGAGCTTCTATTTTATTGAGGGTAATACGCGAAATGTGATTCACAGG
ACCAATTTGTAAAATCATTAGCGAAAGACGTTGTAAAAAAACAAGATTAT
TACTATCACGCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033790XLOC_033790Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053527-exon-scaffold_233-1491911889:26226..26245TCONS_00053527-exon-scaffold_233-1491911889:26226..26245Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1510915933:26226..26245TCONS_00053527-exon-scaffold_233-1510915933:26226..26245Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1575043694:26226..26245TCONS_00053527-exon-scaffold_233-1575043694:26226..26245Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1491911889:26684..26902TCONS_00053527-exon-scaffold_233-1491911889:26684..26902Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1510915933:26684..26902TCONS_00053527-exon-scaffold_233-1510915933:26684..26902Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1575043694:26684..26902TCONS_00053527-exon-scaffold_233-1575043694:26684..26902Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1491911889:28888..29048TCONS_00053527-exon-scaffold_233-1491911889:28888..29048Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1510915933:28888..29048TCONS_00053527-exon-scaffold_233-1510915933:28888..29048Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1575043694:28888..29048TCONS_00053527-exon-scaffold_233-1575043694:28888..29048Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1491911889:31944..32044TCONS_00053527-exon-scaffold_233-1491911889:31944..32044Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1510915933:31944..32044TCONS_00053527-exon-scaffold_233-1510915933:31944..32044Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1575043694:31944..32044TCONS_00053527-exon-scaffold_233-1575043694:31944..32044Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1491911889:36019..36088TCONS_00053527-exon-scaffold_233-1491911889:36019..36088Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1510915933:36019..36088TCONS_00053527-exon-scaffold_233-1510915933:36019..36088Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1575043694:36019..36088TCONS_00053527-exon-scaffold_233-1575043694:36019..36088Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1491911889:36917..37016TCONS_00053527-exon-scaffold_233-1491911889:36917..37016Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1510915933:36917..37016TCONS_00053527-exon-scaffold_233-1510915933:36917..37016Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1575043694:36917..37016TCONS_00053527-exon-scaffold_233-1575043694:36917..37016Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1491911889:38449..38538TCONS_00053527-exon-scaffold_233-1491911889:38449..38538Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1510915933:38449..38538TCONS_00053527-exon-scaffold_233-1510915933:38449..38538Clytia hemisphaericaexon
TCONS_00053527-exon-scaffold_233-1575043694:38449..38538TCONS_00053527-exon-scaffold_233-1575043694:38449..38538Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:26226..38538 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.177426	0	0	0	0	2.05956e-08	0	0	0	0	0	6.18107e-07	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053527 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top