TCONS_00053557 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00053557
Unique Name	TCONS_00053557
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1162

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_233:502746..523834+

transcript sequence

>TCONS_00053557 ID=TCONS_00053557|Name=TCONS_00053557|organism=Clytia hemisphaerica|type=transcript|length=1162bp
aTATATTCTCAGCAATTCTCTTTTCGTTACTATCGGAAAAGCAAACTGTA
TTTTCTTCACAAGGGGTATGATAAATGGGCCGTACAGACCTTTTTCTTTT
ACTATCTTCAATTCTCTCTCCGTGAGCCTTCTATTATTGCCAAAGCATTC
TAACTTTTCTTCACAAGGAAGAGAAGGTGGTGTATGCCTTTTTTTTCTTG
TAGTGTTACAAACATAGTTTACTCTACAGTTTCTTTTAATATCATcaaaa
ttgaaagtttgaatATCGTAATTAATATGTCgttttttttgcttcaaaac
cCAGTGGTATGAATGATACATAGTTTTATAAGGATTTTCAACACGAGTCA
CGTGGTGTATCTTGACGTTGAACGAAACACCGGTCAACCGCAAAGTGTCA
TTTAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATCTTT
GAAATCACTTGACGCTCCTTCGGTGATTATAAAACTGATATCAAGTTGAT
TTTTCTCCAAACAAGTCGTATTTATTGAATTTTCTGTTATCCCTAGTTCA
GTTCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCAAATTG
TTCCATATGCCTGCCAAGATGATGGTACCACAAGTTTCGGCGCTGGGTTG
AAAGCCAAGTGAAGTTTGGAGCATACATAACCATTGACAATAGGATGATT
GcatattgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATC
GTCCATTGAGTGACCAGTGATATACAAAACGACATTATGCGTTCCCTTAG
TGTTTCTTCTCAGCTCTTCCTTAAAGAATGTGTGAGAGCCAATAGGGTAG
ACAGGAGCCTTAATAGGATCCTTCACCTCAGGACGTTGTTGGATGAATTG
GTTAGGTTCGTCCAGATTAATCGTGATGAGGTCATTGTAATATTGATTGA
GAACCTTTGGAACCAAATCTTTAGAATCTCGGATGTTCATTACTTTCTGT
TCCAGCTGATCATAAAAACAGATTTCATAACATTCATCAGTGTGGAATTC
TCTCAATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATGAACTT
CGACAGGATTAACATTGTCAGCGCGGACCAACACTTTATACATTACGAGT
GGCTGCCATATA

Run BLAST on NCBI

transcript from alignment at scaffold_233:502746..523834+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00053557 ID=TCONS_00053557|Name=TCONS_00053557|organism=Clytia hemisphaerica|type=transcript|length=21089bp|location=Sequence derived from alignment at scaffold_233:502746..523834+ (Clytia hemisphaerica)
aTATATTCTCAGCAATTCTCTTTTCGTTACTATCGGAAAAGCAAACTGTA
TTTTCTTCACAAGGGGTATGATAAATGGGCCGTACAGACCTTTTTCTTTT
ACTATCTTCAATTCTCTCTCCGTGAGCCTTCTATTATTGCCAAAGCATTC
TAACTTTTCTTCACAAGGAAGAGAAGGTGGTGTATGCCTTTTTTTTCTTG
TAGTGTTACAAACATAGTTTACTCTACAGTTTCTTTTAATATCATcaaaa
ttgaaagtttgaatATCGTAATTAATATGTCgttttttttgcttcaaaac
cCAGTGGTATGAATGATACATAGTTTTATAAGGATTTTCAACACGAGTCA
CGTGGTGTATCTTGACGTTGAACGAAACACCGGTCAACCGCAAAGTGTCA
TTTAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATCTTT
GAAATCACTTGACGCTCCTTCGGTGATTATAAAACTGATATCAAGTTGAT
TTTTCTCCAAACAAGTCGTATTTATTGAATTTTCTGTTATCCCTAGTTCA
GTTCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCAAATTG
TTCCATATGCCTGCCAAGATGGTACCACAAGTTTCGACGCTGGGTTGAAA
GCCAAGTGAAGTTTGGAGGATACATAACCATTGACAATAGGATGATTGca
tattgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATCGTC
GATTGAGTGACCAGCGATATACAAAACGACATTATGCGTTCCCTTAGTGT
TTCTTCTCAGCTCTTCCTCAAAGAATTTGTGAGAGCCAATAGGGTAGACA
GGAGCCTTAATAGGATCTTTCACCTGAGGACGTTGCTGGATGAATTGGTT
AGGTTCGTCTAGATTAATCGTGATGAGGTCATTGTAATATTGATCAAGAA
CCTTTGGAACCAAATCTTTAGAATCTCGGATGTTCATTACTTTATGTTCC
AGCTGATCataaaaacatatttcataACATTCATCAGTGTGGAATTCTCT
CAATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATGAACTTCGA
CAGGATTAACATTGTCAGCGCGGACCAACACTTTATACATTACGAGTGGC
TGCCATACAACAATGATGCGAGTCTTGTCTACACAAAACGAAAAGTTTTC
TGCAAGTGAAAAAGTGACATTTCTAATGATCAATAAAAGCATTAGTagta
ttgtcaataaaactttcaTCTCGAgctgatttttttgtttgaacTAGACT
ATTCAGTGAGAAAATTTAATCCTTTAGGTTGAAAATTACTGAGCAATTCG
AACAGAGAGACTACATTGTCAAAGGGAACAAGCCAAGATaaacaatcttt
tcaaaatatgttttttgagAGGTTCCACTTCATGAAAAGACGTAAGCATA
TTGTTTTTAAATGTCAAGTTAACCAAAATTACATGGAATCAATGCCAAAA
CACTTCTTTTGTACGTAGCGACGTGAATGTAGCTTAAGTGGCAATCTGCA
ATACAGAGTGTCCGGAAagaaagtatcgagtcgtacaacttctatagaaa
gaaagtttttgTGTTTGCTTCACTAAATTTGTAATGTTTATCAAAGGCCT
CAAAGCTTCTCTTTGTGTCATATTAATTTTCacgagacatcttttatgaa
taatttttacaaaaaatgattctcaataactttaacgtattgaaaattgt
aaagaaagttaattataatgactgttgtaaaaacagTTATTGTgatggta
tatattttcttacattttgttaaacacacgcaacaaccttctcATGTTCG
AACTTCATACTTTTTTTCAGACAccctgtatttcaaaatcagTAACAGTA
CTAGGCTGCTAGGGCAAAATtggttacggggatgcgccgctggtcaggtt
accttttttaacctcctcaagtcccaggtagggtcgcaaaaacaccaaaa
tgaaaaaattattttctcatgcttgattggattcttttgaattctcaaaa
aattatgcacataatttgattattttcaactggaaatttcgggcacttcg
gtcccctcaatgcaaataagaattacatatttgaaatcagctctTTTCAT
AGATTCACCAGtgttgaaaactatttgaaaaggcacttctaagaaaagaa
atttgggtgtgaagttttcacctaaattagtTATTCTTTCCATGtagaat
aaaattgattttttatttttaggagtTAAAATCGATGGAATCACTAAATT
TCTGCTCCTAAAATTCCAGATTGTAAGctaaaatagatttgtaaatatca
attgttttccaaaactaaaaatttcgtaACTTAGAAAAAATACCGTGCAA
ACATACCCTTTTAAAGATTTCCATCCACGCattttgagaaactgttttta
cgaccaataatcacttttaacaaagggaatctgaatagatgatgaagtag
ccaaagtgagatattattctatctgataacaGTTCACTGCTCATAGGGTG
CATTTTTTGTGAGCTTAAATGACACTTTGCGGTTGACCGGTATTTCGTTA
AACGTCAAGATACACCACGTGACTCGTGTGGAAAATCCTTATAAAGCTAA
TATATCATTCATACCACTGGTTTTCAAGTTTAAGTCCGTATAGATATGTC
AGGTATGATTATTTGAACTGTTGATTTTGATGATATTATGCCGGCTAGGA
TGAAGAAGAGACATGCAGAAGAGCAACAATCTACATCCGAAAACAATGCA
ATAACAGTCTTGCTTGTGTCAAAAGTATAATCCCTCTATCGAGGAAGAGT
TTTGGGGAGAAAAACGAGAAATAGCCTCAAAATTGAATCAACTAAAAAAC
GCCGTCTTTCATAATATAATGATCAATATTATTATATACTAACCTATAAT
CTATAAttctatctaagaaataagcccaaagctGAAAGAAATTTACCAAC
GGGTTTTTTTACTGAAAAGAGTTTGCAGCCAAATTATATTTTctcgcctt
tactatcactatAACATACAATAACATCGTCTAAATTATTATAACAGACG
CGACTGGTAACTTGGACCCAGCCCTCAAGGCTCTCAAAACGCAAGAAGCT
GTTAAAATTTATGGCGTTGATAATGAGAAATTCATTCCCAGTATGACCGT
TGATGATATTATTCAAACATCGCGCACAGATCTCACCTTGAAGCAgtttt
atgaatatttttttgagaTACTCAATAAAGAAGTTGAACGTTTCAGTTCT
GGCGGAGAAATTGTTGAATTATATTCTAATTTCTTAAGTTGTTGCTGGTG
GTATACTCTAGGCTGCTTGCAATCAACTAACTGATTCCTATCTGAAACTT
TATTAACTcgatgaaaaatcttaaaatgtcGTATTTCGTAATTGCGTAAA
CTAAATGACAAAATTGTATTGTTTTAGTTGTCTAAAGGGTAATTTGTTCA
TGTTAGTGTTGAGGAGTTTATTATGAGACATTCAATAATTTTGCTGGTAT
GTCCGAAAAATATCCGAAATAATCAACACATGTAAACCACGGTATATTCG
TAGAGCGAGagcgaaaaataaagaatataaGGAAATCCGTATAGATGCCC
TAACCCTTTATTAACCCGCACTTAGGTGATAAACATACAGCATCTTAGAT
TCGACCTTGTGtaaataagtaagtaagtaagtatttatttaccttTTTAA
CACATCTGAAAATAATACAAGAGGCggaatcaacaaaataaaaaggaagG
AGACCGCTTTATATAGCTAAGCTAATCAAaaaaagatgcggccacctaag
tGCCGAAAAAATTTAAGCAATAAAAACtagaataaatttttattttattt
ttgctttcttGGTTGGGGAGGGGGTGTGCTCAGTATTCCCCAATACAGTG
AGTGAAGGCAAGAGATTTAATGAAATCATAATCAGATGAGCTCAAGGTTA
TATCAGGGTATGATCGCTGTAAACAATTCCATTGTGTTATGCAGATTTTA
GTAAATGATTTGTTACCAAAAGTTATAGTGTTAAAGGAAGGAACAAAAAT
AAGTTTCAATTTTGCTCCTCTGGTACCATGATTATCATCACCATCAGCAT
CAAGCTGAATGAAGTTAAAAGATTGCAGGAGATCGAAAGGTAATCTGTTG
TTCAAGAATTTGTgaacaaaagaaatattaagGCATCTGACAAGGTCgaa
gattttgagaattttaagaTCTGAAAAAAGTGGAGAAGAAGGGCATTGAG
AGTTATTAAAGATCATGAGACGTAAGGCTTTCTTTTGAAGAATAAAGATA
GGTTTTGATGTAGTACTATCAGTGAGACCCCATAGTTGGCAACCATATTG
TAAATGAGAATGGAAAAGAGCCTGAAAGAGCATAGTATATATTAATAATg
gtttttgttgaaacataATGCCTGAGCTTCGATATTATACCATTGGCTCG
TGCAAGTTTTGATGACAGAAAGGTGGTGTGTGCTTTCCAGTTGAGGTGAG
AGTCAATCAACATANATTGTTGAAACATAGTGCCTGAGTTTTGATATAAT
ACCATTGGCTCGTGCAAGTTTTGATGACAGAAAAGTGGTGTGAGCTTTCC
AGTTGAGGTGAGAGTCAATCAATATACCTAGATACTTGATATGAgagctt
tgaaagattttcttaccTCCGATTTTAAGGAAAGGATTGAAAGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CAAAGTTACCATCATCAAGAGAATTTCTGTGAACTTTGAATGGATAATTG
CGCGCGCAGCGCGTATCTCGTTTGGTAAAGTGCGCGCGATATACTAAATT
GGTCCCTATATggctaaacatttttgaaaaattcagtgttcgtgtatgac
tacatgacacCAAATTCTCGTGTTTCCTCAGATCGCATCGCTTTCGAAAC
TAAATCCTCATGTCGCAGCAAAAGAACTCCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTTCCCGCG
CGTTTATTTATTTGGACCGGTTGCTATTGCCTACcaacaaaaaactttct
ctTCTTGCGTCTTGCCTTGCCAGCACATCAGCTTGCTGTGGATTGGATTG
GATCAAAAGATGCAAACACTAAAATCgaatatttttgttcgaatctataa
cgttcgaattagattttcgaataaaaacattcgaaactacaagGCGGAAG
TAAAAGGGCGCTATCagtaaagcataaaaaagctgataatacgcagggaa
cgaggttggtaaAAGGGCTGCTCCGCTCTCTCAGCGAGAGGTTCGAAAAA
ATTGACTCTTCGTTCATGGGACtcgcttttgaaaaaaatagcgaCCTGaa
tgtagtctagcaagctagacgaccaatttatacatagtataaataaagca
aaaagtaatgaagggaacaattttagtcgtctagaaacctttgtgcacta
actccaaacaaaagaaaagtgtcaatattgcaattataatttgttcccgc
tcaaaaaaaatcttgaaaaaaaaatgtgtgtgtgtattgaaagtttttca
tttgagttgattttgttttgagagtttgttattcatgatattcatgacgt
aatgttttctacggaaataccccggttttagccagtagtggcacttttaa
actagacaaaagttgtataaaactttccactactggcaaaaactggggtc
tttccgtagaagaAAACATTACGCCATGAATACCATgaattgcttgataa
attgttttctcgctacgcaagtttctgcgtagctagccggggtatctata
aggctggaacaccggattcttccagtcgtttatacaaactaaatctcGTA
TTATTATCattagtacacgttttttttatataaggaacacgtttataagg
aactcgaggctgaaatggtccaaaaaataaggaattgtttaggaactgct
caggctgagaataagaaaacaagttttaaggaacagtaagagataGTTAT
CCAAActtacaatcaaggtcataatatttgagaaaaaagggaaatccacc
gggaagtttttgaaccacaatcgatttgtaagtgctctaaagtaggttgg
aagggtagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaaaaagatagccaaaaatcgactttctcaccagaactttaa
atcttgaaaaacgttaaaataaccaaaattctcaatatattatgacctta
attgtAGCAGCTATCTAAATAAGgcactcgataaggaactttgaggctta
aattctctgtaaaaataaggctcaggctcagagcaaagttaaggttcctt
ataaaaaaaacgtgtattggtattattagtattacacgcattataaacga
ctccagtctaacctgaatgggactgaaatgtGTTTTTGCGGCAtttacct
gggactcgtgaaggtgaaaaaaggtacccccgCTCCCTGGGCCGGTGCAA
TATATATACTCGATTTTcgggatttttttaaatttttagaattttggtat
tttggaatttctttttacattcccttTGGCCAATgtgtttttcagatatt
ttggaCTTTATAGAGCCCGAggctgttgtaaaattttcggcTGGGGATaa
aaaaaacaggtaaataaaagttttttcaactaGGAAAAATGTCGTCGCCT
TAATTCTtataattttcgtcactttcccccgacatattTATCGAGAAAAG
GCACTCTAGTTTTGTCTAACAGATTTCCCGGAAAAAGAATATCCAATTAA
AAAGCTGTTGTTTTCACCTTTCACTAGTGCTTCTCAAGACTCTACACTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNATTATCCTGGATTACCTCAATATTATTTGCaacgcaaacagagtggag
gaacgtacttaagcgttctggagcgcgcgtaacccctttttctaaacatt
gattTTTATCCCTATTTAAAATGCAATGGAAATCCACTgtggctgcgaga
caggggtgttataatgTTAAATCAAAACGCcttgttaaatatttcctatc
tatataggaaatatttgttaaaacggtaaaatttcttctccttcttctcc
ttctccttctccaagtctaacgctcgcttttggtcaatttcgtgagtttg
tacatgagtctctttttaaatcaagctccggcggtaaaaacagtatgatg
ttcttttttcgaggcggaagacgtcattctNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacgtc
tgtggtaaatatcggtacggcgctctattctccttgtcgatcgggcaacg
tcggccgtttcagaagcgtattgttgatcggaccatactgctctgtttct
aactgtcaaaacaaagatggcagaaataggcaacaacttttgctctttcg
ctacttttctttgcttgaattggatcatgatttttgtacgattgtcacaa
ggaatggtcgatagtgaacttttcttaatattcctttNNNNNNNNACATA
AAGCGAGTTAgttaccgcgcgagttacgtcatacactccaccgcagcgca
caacgaacggtgttttagtgaatatcaataattataagaatatcttctgt
gattaaattcattaaactttgagtgctttaTTGAATATcaagaagataag
aagataaaaaatgcgctggataattttcattgtaacagtttggtcaatca
ttgctgaaagtttgaaaaaaaatttccgacgcaaaaaaaaacttcaNtgt
ttgtatatttacatgAATCGTACAAAGGCAAGGGACtttgaataaatctg
accatgttatacctgaaaaattactacttgcaatatgaaaaaagttttca
ccCAACGAATGCAGCGCAATGCCaacaatgcaacaatgggaatggttgat
gaactgattttagctaaaaatttaaacatggagcaaaattgactggttaa
tgattgaNgtaaaaaaagtgcgaaaagacacgaacgccattttttaatga
gtgttgttatgattttttagatcgcGGTCGCGTagaggaactcgccaaat
gttcctaactgatgtatatacaattaaaatttttcttgaacttggagatt
ctcttccccgcgtgcattttaaaacgtggaaaactttagttgtgaattta
gagatcttttgcaaNaatgaattaactgctggggttagtgacagttagtg
aaaactcgttgcggttataaatttcaaattttaaagctgataaccggatc
cggaacacACAAGGCCcaaatatgaagaatgttatgttatacttgtttaa
aaggtttattgcattgaatatggatgtaaataatttgaaatcacctcaca
tCACACATgtacagttagggaaaccatccaggatcctgccattctataag
ccagcaaaaactaaatgccacttgtaaacttaagtttcttactattttcc
atcaNTGCATTCTGtcgtaaaatatgaaattgtttaaccctgttttgaaa
gatttttactttttagcacgtacattatttcaaaaaactccaaaagttac
tttaattttttacattttttacaatattatatatatgatagtataatgca
aaatatttcatctcattttgaaaatatataaaattttctttggttttctt
actgtgaaatattctactttttgtcattctttcattttacatatttgccc
tttttggctatataatatttctggaaatcagcgcttaaaataataattat
ataatcaggtcttttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNcattctttcattttacatatttgccctttttggctatat
aatatttctggaaatcagcgcttaaaataataattatataatcaggtctt
ttgatgtgttcaacgcaacactctacttggcggtgcgacgccggttgacc
gctagtataatactaaaatccatttaaagtacacctaacgaaaattaaag
ttccagccaatttgattactgcattgttgttctcagtcgggttcagctcg
tatatattccgtgatccgtagctttgaacctacagtcatcttatgaataa
tcctgtaaatactctcaataacataaatggaattttgaaattcatagGGA
CTTgatgttgcttgatgttatctgagatttaaagcactttgaaatctttt
gagggcatcaattattattttaacatttgtaaaggaaatatttatccgca
tctttgcggctcttgtttttaATTAGAAGTGTTTTCTCTTGTTCTAAAAC
CGTTCTATGATCGCTCTTTGTTTACCAGACAAGTGTTCAAATCAGGGagt
ttttttaaaacattttcaacctAATGGTAATACagtattttaaattattt
aattattaATGTATATTGCTCAAATActgaaatctttaaaataaattgcT
TGTTCCCAATTTTGGAATCCTAATTTTTACCCGCAAGCAAGGTAGATTTC
AGATCGATTGTCCCCCTCCCAGGAGTATGACTTTATCAGTCGATTTTACG
GCAACCCATATTGGCATTTCTGGTCTTGGAACGAAATTTAGATGGGTGTA
AAAAGGGGAGGAAAGCCACAAAGATTTCCTATTTTGGGCTCCCAATGAAA
GAGATCTTTTTACCCCTTAAAATTATCAAGAAATTCCATATAGTACAATG
CTTTAAGAATTCACAAAATTGCATAAAATCTAAATAAACTGGATCAGAAA
AATGTTAACGAATAAACACAAAGGACAAAAtaaagtcgtttaaaaaaatc
aaatacaaaCTTTCCCATGAGTAAAAagtgaaattgaaaatatgaaattt
tgacacGAAAAAATTCTTCTTGACTTATGAGTCTTTAACAGcctgaaaaa
tttcataaatgttACGCATTTTAATTTAAGAtagaagttttacagatttt
cgattttgtcaagaatttttcacgAGCATTCACTTTTgcgaaaatcataa
aatttcgcTAAAATAATGCTATATTAAAGGCCCCCTACAAACATATAGTT
TGTGGtaaattgactttttcaaaaactgcttcGGTAGAGTTTCTTGTCAT
TAAAcgatatttattttgaaagtcttttttcCTAGGATTGTTGAAGGCTG
GCTTTGTTTTTTCAGTGTTGTCCCAAGAAACTTGATCGTCCATTCTTCAT
ACAAAGTGTTTATTGATTTGGTTCTAGGATAATTGCCCCCCGGATAATTG
CCCCCGGGACAATTCCCCCCAGACAATTGCCCCCCCCGGACAATTGCCCC
CAGGACAATTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCA
GGACAATTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCAGG
ACAATTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCAGGAC
AATTGCCCCCCCCCAGACAATTCCCCCCTGGACAATTGCCCCCAGatgtc
aaaagtcaaaaaagatgTCAAAATTTATGGTGATCGAGTAACTCGATTTT
Agccttaatgttcttataaaaaacctcatctttgaaatatcctgaatttt
tttgaagacctttttttaagtttcatgaatgaatgaatcaatcaataaat
cgcACCTGGGTTTTCTCGGAGCCAAGAATATTAAAGCGACAACATGAAAG
AGCGTCCCAGCATCGTCCCACCTGAGTGTTCCACCATCgccccacttgag
cgtcccacctgagcgtcccacctgagtgTCCCAGCATCGTCCCACCTGAA
CGTCCCAGCATCATCCCACTtaagcgtcccacctgagccaccgtcccacg
tcccaaagtctttataaaacggcgcgaatctgatttaccacatttgtgga
gcaagaagcaaaagtcatcttttaaaagaacaaaaacattgcgtacgaag
aaaacgaaagtagcacagacagaaagaaagaaagaaagaaagaaagaaag
acaaaacgacatacagactagcgctattaatatatagatatctGTGATTG
ATAAGAGTTCACACTTTTACAaagtttgtcaatttttcttccAAATTATT
CTAATCTAACGCTTAAATTTATATTTCGTGATTAGAAAGGAGATGTGTTT
CTTATGCTGACAAGGCTTAattaacaatagaatttctcaaaaattgcgAG
GAGGGGagagtttaaaaaataatactttgGCAAGGAAATGGCGGCAGGAA
ATACATTAAATTATGTTCTTTAagattctgaaaatttcatcgTTGGAAAG
GCCAAggataattttataaaaaaatattctaatcATTTACTGACATTATT
CAAcctaatcgtcagccgtgcaaaattactcgaatctgattggtttagag
gagtgcaattaatcgttaattgcactattaccacttNTTGAGATATTTTC
CCTTGTTTTACTCTCTTCAAATTTCTCTTGCTGGGAAGGTCAAGCTTTGC
AAACTCTTTCTAATATACAAAAAAAATCGAGAGTAAAAGGATTTCATCCC
GTTTGTATAGACAACGCAGACAACGACAAacataatttgaaaataatact
tTATATATCGCGGAGTTTTTATCATCTACTTGCCTTGTCGGATACAATAA
TTTCTTTCAGAAATTAAACGTTCAACTTCTTCATTGAGTTGCTCAAAAAA
GTGATCATGAAACTGCTTCGACGTGAAATCTGTGCGCGGTGTTTGAATAA
CATCGTTATAGGTCATACTGGGATTGAATTTCTCTTTATCGACGACGTGA
ATTTTAACAGCTTTTGGCGTTTTGAGAGCTGTGAAGGCTGGGTTCGAGTT
ATCAATGGTGTCTGTTATAATAATGTTGATCATTTTATCATCAAAGACGG
CATTCTTCAGTTGATTTGATTTTGGGGTTATTTCTAGCACTCTCACCAAT
TCTCTCTTCGTGGGCATCAAATTAGTAATGGGAATCTTTAATGTAATGGT
ATCTTTACTACGCCTTTTCCATCCTATAGTAATACAACCTTTCCTTGTTC
TATTATATAACATATAGATTGTTTCAGGCTCAGCTGGCTCAATATCATca
aaattgaaagtttgaatATCATAATTAATATCTCCTTTTTTGTGGTTCAC
AACCCAGTTGTATGAATGATATATACCTCTATAAGGATTTTCCACACGAG
TCACGTGGTGTATCTTCACGTTTAACGAAACACCAATCAACTGCAAAGTG
TCATTTAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATC
TTTGAAATCACTCAACACTCCTTCGGTGATTATAAAATTGATATTAAGTT
GATTTTTCTCCAAACAAGTTGTATTTATCGGATTTTCTGTTATCCCTAGT
TCAGTTCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCGAA
TTGTTCCATATGCCTGCCAAGATGGTACCACAAGTTTCGGCGCTGGGTTG
AAAGCCAAGTGAAGTTTGGAGCATACATGACCATTGACAATAGGATGATT
GcatattgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATC
GTCGATTGAGTAGCCAGCGATATACAAAACAACATTACGCATTCCCTTAG
TATTTCTTCTCAGCTCTTCCTCAAAGAATTTGTGAGAGCCAATAGGGTAG
ACAGGGTCCTTAATAGGATCCTTCACCTGAGGACGTTGCTGGATGAATTG
GTTAGGTTCGTCTAGATTAATCGTGATGAGGTCATTGTAATATTGATCAA
GAACCTTTGGAACCAAATCTTTAGAATCTCGGACGTTCATTACTTTCTGT
TCCAGCTGATCataaaaacatatttcataACATTCATCAGTGTGGAATTC
TCTCAATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATAAACTT
CGACAGGATTAACATTGTCAGCACGGACCAACACTTTATACATTACGAGT
GGCTGCCAAACAACAATGATGCGAGTCTTGTCTAcacaaaatgaaaagtt
ttctgCAAGTGAAAAAGTGACATTTCTAATGATCAATAAAAGCACTGGTA
CTATTGCCAATGAAACTTTCATCTCGAACCGATTTTTCTATATGAACTAG
ACTCTTCAGTGAGAAAATTCTATGATCAAGAGAAATGAATAAGGTTAatc
ttttaattgttttcataAATGTGCTTATatcattaaaatctaaataAGCG
ATAATTGACGAAAGCTGATGATGGAGGTGTTCAGTCTAATTGTTATTGCT
ATCGTAAAATCTCACTAGGTTACACTAATTCAATTAGCTGTCAACGTCGC
CtcacaaaaatgcgggagagcaagtcgataaaaatttttccccgattATC
CGATTATTCTAAATCGGAAAATGAGGAAatcggaaaaatattttcagtga
aATTCAATTTTATCCAAAATGTTATCGGGAAATTGGGGAAGTTGGGGGAT
TTTTCGTCCCAATTATagaaaattaggaaattttgcCAATCTGTCTTTCC
AAAACCTGAATTTGTTTTTCAGGAtatcggaaaatttttggaaatgcggg
agatgcgggagaaaatcctgaaaatgcagGAGAGTTGATAGCTATGTAAT
CGGTGTAATTTGAGTCACAATCACCCTCTtttagaccccccccccccccN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNgatttgtaagtgctctaaagt
aggttggaatggtagagttttaactctgaattttaacatgagacttaaga
ctgaggatccaaaagttcaaaaatagtccaataagactcagattatagcc
tggaagtctgccaacccctcccaaattaaaatattcgattaaattaaaga
gatagcccaaaatcgactttctcgccagtaCATTAAATCTTGGCTTTCAA
CCCAGCGCCAAAACTTACGGTACCATCTTGGtaataatatgaaaaaaatt
gatgacgtaaGAAACatattaccttaagtggataaatctTTGcgtgtact
aattttcgcgagacgaaaatttaaaagatttcgcgtggattaaatttcgc
gaaaattgccttatttatttcatttcgcgactatataaattgtaactaga
aaagagatgtgtgctttttaatcgaacaaaGACAGACAAAGTCAATGAAA
AGcattcaaaaaacttcaaagaaagtACTTTTAGGAGGTTACTAGagttt
aaaattgaaatgaagagTTGAACTGAACTCGTATTATGTTTTGATTgtaa
cttttattttcgcgattgtaaaattccaaataaattcgcgtggactaatt
ttcgcgaatcaaaggccttcaaaattttcgcatggactaaatttcgcgaa
aatggccgaaatttgcgaaaaccgcgaaaattaatccacgcaaaaattta
tccacttgaGGTACAAAGGAACCGAACTAGGGTTAACAGAAAGTTCGATA
AATACGATTTGCTTGGAGAAGAATCAAACTTAGTATCAGTTTTATAATCA
CTGAAGGAGCATCAagtgatttcaattttattgagTGTTTAAATGACACT
TTGCGGTTGACCGGTGTTTCGTTAAACGTCAAGATACACCACGTGACTCG
TGTGGAGAATCCTTATAAAGCTATATCATTCATATGAAGCAAAAAACGAC
ATATTAATTACGATATTCAAACTTTCAATTTCGTTGATATTAAACCGGCT
GAGGCTTCTGTAAAAATGGTTTGTAAAATAATGCGTgtttgtagaaataa
aaggtcTGTACGACCTTTTTTACACACCCcttatgaagaaaaaagaatgc
ttTCCCTTTACTAATGTAAGGCCTGAGAAGAGAGAATTGAAGAGagtgaa
agaagaaaaagtctcaaaatcgaATCAACTAAAAAGAAAGCCGTCTTTAA
TGATAAAATGATCAACATTATTATAACAGATGCGACTGATTAGTCAAACC
CAGCCTTCACATTTCTCAAAAGACAAGAAGCTCTTAAAATTCACGTCGTT
GATAACCAGAAATTAATTGCCAGTATGACCGATAACGATGTTATTCAAAC
ATCGCTCATAGATTTCACGTCGATGCagttttatgacctcttttttgAGA
TATTCAATGAAGTAGTTGAACGTTTCAGGTTCTGGGAGCAGAATTTGTTG
AATCGTCTTCTAATTTCTTAACTCTTTAACTGCCGtgcgtattttttaag
gttcgacctatttgccacggaaaGTAATGAAGGTGCGACCTATTAATCAC
ATGTCGGCATATGCTGACATGAGTTGCCACAGAGTTTATAATCACACTTA
cctttattttctgaaaaaatatcagaaatatgAGTGATGTGTGTTTAATT
TGAGTTGAAAatatataattatgaaaaacatctttgaactacattttaat
tattcaatagtGCTACTCTCGGCTgcttaataaacgtacatgaaTTTCAA
CAAACATTTTCCTCAATTTCAAGTGCCTACTTGTGTTTCTTAAGGCTAAA
TATCCTTCTTTGAATATGGAGGTTTTATCTATTTGTCAAATGAAAGCAGA
ATAACTATTATTTACCCCCGAACCTGAAAAGACCCTTTAATTACGTTTTT
ACACCTCTATTTTCAACCCTGTATGTTTATTCGTTACTTTACGTTTATTA
GGAACTCGAGAGTAATAAAATCTAGTTCAAATTTGAACGAAAGTGCAAGT
GCCGGCAAAGAAATCGACAATATGCTCTTGTCGGCATATGCCAacatcgg
cacggaaagggtttcAGTcgaaaaatcaatcaatcattcaaCACAATATT
TTAACATTTCCTATAATATAAGTCGTCTATTTATGTGAGCAAGGTGTCCC
CTTAGAAGGAAGATTGTAATGCCTCGATACCTGCCTTGTCTCTAGCATCT
ATGAAAATTCCATAGCGTAATGGGTAAttgaccactgcgcgctaatgacg
acttactattggtccaaagttttgaaaaacgtttaatattttttcgtCTA
GCCAACGGAAAGCcgttatggaggcgcaatcagtcctgattacccatgat
ccatttcagCGCCACTTGAAAATTGACTTTATTTTCATCtccatttaaaa
ttcaatggaaaaattgcactccaaaaccatcccaactgGATTTATTGAGC
CGAGAAGAAACTCCACTGgagctgcgagacaggggtgttctatCATTAGA
TCAATACGCCTTGTTTTTGATGAGAAGTGTTCTCTTGTTCTAAAACCGTG
TCATAATCGCTTTACGAATCTTTGTGTACCAGtcaaaaatctaaacaaaa
aaaCAGAGAGTTTTTTAAATAATTGTTCAACCCAATATCTtaaattcttt
aataatttgtttatattactaaaataaaaaatctttcaaataattTGCTT
CATTTACAATTCTGAGATCCTTTTCTATCAGATCGTGTTGCAGGCAATCC
TTATTGACATTATTTCTAAAATTTAGATGGGTGGAAAAAGGGGAAGAAAA
GCCAAAGATTTCCTATTTTGGGCTCccaatgaaaaaaatctttttacccC
TTAGAATTGTCAAAAAATTCCATACAGTACaatgctttaaaaaaaaattc
acaaaattgcaaaaaatctaaagaaactGGATGAGGAAAATGTTAAAGAA
TAAACACAAGGACAAAATAAAGTCGTCTAAAAAGATCAAATACAAACTTT
CCCATGAGTAAAATGTTCtataaattttacattttatttcaagttagaag
ttttacagattttcgattttgtcaagaatttttcacgagcataaactttt
gcgaaaatCACGAAACTTTCTGCCtgcaaataataaaataatgcTAAATT
CCCCCCCTACAAACATATAGTTTGTGGTGAATTggctttttcaaaaactg
cttcGGGATTAAATATTTCCGTTGTGTTCAAATATGAGTTTCTTGTCATC
AAcgatatttattttgaaaatccttttcctATTGAGTGTTTTTGAAGgct
ggttttgtttttacagtgTCGTCCAAAGAAACTTTGTCATCCTTTATTAT
ATAGTGTTTATCAATTTATCACCGAAGTCAAATTGGTTTTCTACAGTTAG
TTTTCTTTTGATATCTTCCCTTGTTTCACTCTCTTCAAATTCTCTCGCTG
GGAAGTCCAAGATCTCCAAACTTTCTCTAATCTACAAGAATACATCCCGT
TTGTATCGACAACGACGAATCTCCGCATATCCTTTCTTATTCAGTTTAAT
TCATCCTAATTTAGATTTGAAGAAGATACTTTATATCTTTGAGTATTTAT
CATTTACTTGGCTTATTTGATACAATAATTTCCATCAGAAGTTAAACGTT
CAACCTGTTCTTTGAGTAGCTCAAAAAAGAGATCATAAAACTGCTTCGAC
GTGAAATCGGTACGCAGTGTTTGAATAACATCGTTATCGGTCATACTGGC
AATGAATTTCTCGTTATCGATGACGTGAATTTTAACAGCTTCTTGTCTTT
TGAGAGCTGTGAAGGCTGGGTTTGAGTCATCATTTGCATCTGTTATAATA
ATGTTGATCATTTTATCATCAAAGACGGCGTTCTTCAgttgatttgattt
tgaggcttttttttcttttactctcTTCAATTCTCTCTCCGTGATTTTCG
ATTCACTTTTCTCAAAATAGATAATGCAATTGCCCATCATACACCTCCTT
ATGGAAAGAGCTGGCCaaatatcatcaaaattgaaagtttgaatATCGTA
ATTAATATGTCGGTTGTTTTGCTTCACAACCCAGCGGTATGAATGATACA
TAGCTTTATAAGGATTTTCCTTACGAGTCACGTGGTGTATCTTGACGTTT
AACGAAACACCGGCCAACCGCAAAGTGTCATTTAAGCTCTCAATAAAATC
AAACACTTTCCTAACGTCAATTCCATCTTTGAAATCACTGAACGCTCCCT
CAGTGATTATAAAATTGATGTTAAGTTGATTCTTCTCCAAACAAGTCGTA
TTTATCGAATTTTCTGTTATCCCTAGTTCAGTTCCTTTGTAGTCGGGATT
ACGTAATATGTTTCTTACGTCATCAAATTGTTCCATATGCCTGCCAAGAT
GGTACCACAAGTTTCGGCGCTGGGTTGAAAGCCAAGTGAAGTTTGGAGCA
TACATAACCATTGACAATAGGATGATTGcatattgttttttgttttgaag
ctTTGATAAAGCATCTGTTGTTTTATCGTCCATTGAGTGACCAGTGATAT
ACAAAACGACATTATGCGTTCCCTTAGTGTTTCTTCTCAGCTCTTCCTTA
AAGAATGTGTGAGAGCCAATAGGGTAGACAGGAGCCTTAATAGGATCCTT
CACCTCAGGACGTTGTTGGATGAATTGGTTAGGTTCGTCCAGATTAATCG
TGATGAGGTCATTGTAATATTGATTGAGAACCTTTGGAACCAAATCTTTA
GAATCTCGGATGTTCATTACTTTCTGTTCCAGCTGATCATAAAAACAGAT
TTCATAACATTCATCAGTGTGGAATTCTCTCAATAACATGTCAAAGAATT
TAAGCCACTCATTTCTAGGATGAACTTCGACAGGATTAACATTGTCAGCG
CGGACCAACACTTTATACATTACGAGTGGCTGCCATATA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033804	XLOC_033804	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00053557-exon-scaffold_233-1491911889:502746..503366	TCONS_00053557-exon-scaffold_233-1491911889:502746..503366	Clytia hemisphaerica	exon
TCONS_00053557-exon-scaffold_233-1510915933:502746..503366	TCONS_00053557-exon-scaffold_233-1510915933:502746..503366	Clytia hemisphaerica	exon
TCONS_00053557-exon-scaffold_233-1575043694:502746..503366	TCONS_00053557-exon-scaffold_233-1575043694:502746..503366	Clytia hemisphaerica	exon
TCONS_00053557-exon-scaffold_233-1491911889:523294..523834	TCONS_00053557-exon-scaffold_233-1491911889:523294..523834	Clytia hemisphaerica	exon
TCONS_00053557-exon-scaffold_233-1510915933:523294..523834	TCONS_00053557-exon-scaffold_233-1510915933:523294..523834	Clytia hemisphaerica	exon
TCONS_00053557-exon-scaffold_233-1575043694:523294..523834	TCONS_00053557-exon-scaffold_233-1575043694:523294..523834	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_233	supercontig	scaffold_233:502746..523834 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.395583	0.709443	0	0.124817	0	0	0	0	0.140661	0	0.641789	0	0.521938	0.108757	0.504213	0	0.397116	0.204474	0	0	0.0170743	0	0.175834	1.5498	0	0	0	0	0	0.128812

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00053557 vs. Swiss-Prot (Human)

BLAST of TCONS_00053557 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00053557 (transcript) - C. hemisphaerica