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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053558 ID=TCONS_00053558|Name=TCONS_00053558|organism=Clytia hemisphaerica|type=transcript|length=1237bp
ATATTCTCAGCAATTCTCTTTTCGTTACTATCGGAAAAGCAAACTGTATT
TTCTTCACAAGGGGTATGATAAATGGGCCGTACAGACCTTTTTCTTTTAC
TATCTTCAATTCTCTCTCCGTGAGCCTTCTATTATTGCCAAAGCATTCTA
ACTTTTCTTCACAAGGAAGAGAAGGTGGTGTATGCCTTTTTTTTCTTGTA
GTGTTACAAACATAGTTTACTCTACAGTTTCTTTTAATATCATcaaaatt
gaaagtttgaatATCGTAATTAATATGTCgttttttttgcttcaaaaccC
AGTGGTATGAATGATACATAGTTTTATAAGGATTTTCAACACGAGTCACG
TGGTGTATCTTGACGTTGAACGAAACACCGGTCAACCGCAAAGTGTCATT
TAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATCTTTGA
AATCACTTGACGCTCCTTCGGTGATTATAAAACTGATATCAAGTTGATTT
TTCTCCAAACAAGTCGTATTTATTGAATTTTCTGTTATCCCTAGTTCAGT
TCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCAAATTGTT
CCATATGCCTGCCAAGATGGTACCACAAGTTTCGACGCTGGGTTGAAAGC
CAAGTGAAGTTTGGAGGATACATAACCATTGACAATAGGATGATTGcata
ttgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATCGTCGA
TTGAGTGACCAGCGATATACAAAACGACATTATGCGTTCCCTTAGTGTTT
CTTCTCAGCTCTTCCTCAAAGAATTTGTGAGAGCCAATAGGGTAGACAGG
AGCCTTAATAGGATCTTTCACCTGAGGACGTTGCTGGATGAATTGGTTAG
GTTCGTCTAGATTAATCGTGATGAGGTCATTGTAATATTGATCAAGAACC
TTTGGAACCAAATCTTTAGAATCTCGGATGTTCATTACTTTATGTTCCAG
CTGATCataaaaacatatttcataACATTCATCAGTGTGGAATTCTCTCA
ATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATGAACTTCGACA
GGATTAACATTGTCAGCGCGGACCAACACTTTATACATTACGAGTGGCTG
CCATACAACAATGATGCGAGTCTTGTCTACACAAAACGAAAAGTTTTCTG
CAAGTGAAAAAGTGACATTTCTAATGATCAATAAAAG Run BLAST on NCBI transcript from alignment at scaffold_233:502748..503984+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053558 ID=TCONS_00053558|Name=TCONS_00053558|organism=Clytia hemisphaerica|type=transcript|length=1237bp|location=Sequence derived from alignment at scaffold_233:502748..503984+ (Clytia hemisphaerica)
ATATTCTCAGCAATTCTCTTTTCGTTACTATCGGAAAAGCAAACTGTATT
TTCTTCACAAGGGGTATGATAAATGGGCCGTACAGACCTTTTTCTTTTAC
TATCTTCAATTCTCTCTCCGTGAGCCTTCTATTATTGCCAAAGCATTCTA
ACTTTTCTTCACAAGGAAGAGAAGGTGGTGTATGCCTTTTTTTTCTTGTA
GTGTTACAAACATAGTTTACTCTACAGTTTCTTTTAATATCATcaaaatt
gaaagtttgaatATCGTAATTAATATGTCgttttttttgcttcaaaaccC
AGTGGTATGAATGATACATAGTTTTATAAGGATTTTCAACACGAGTCACG
TGGTGTATCTTGACGTTGAACGAAACACCGGTCAACCGCAAAGTGTCATT
TAAGCTCTCAATAAAATCAAACACTTTCCTAACGTCAATTCCATCTTTGA
AATCACTTGACGCTCCTTCGGTGATTATAAAACTGATATCAAGTTGATTT
TTCTCCAAACAAGTCGTATTTATTGAATTTTCTGTTATCCCTAGTTCAGT
TCCTTTGTAGTCAGGATTACGTAATATGTTTCTTACGTCATCAAATTGTT
CCATATGCCTGCCAAGATGGTACCACAAGTTTCGACGCTGGGTTGAAAGC
CAAGTGAAGTTTGGAGGATACATAACCATTGACAATAGGATGATTGcata
ttgttttttgttttgaagctTTGATAAAGCATCTGTTGTTTTATCGTCGA
TTGAGTGACCAGCGATATACAAAACGACATTATGCGTTCCCTTAGTGTTT
CTTCTCAGCTCTTCCTCAAAGAATTTGTGAGAGCCAATAGGGTAGACAGG
AGCCTTAATAGGATCTTTCACCTGAGGACGTTGCTGGATGAATTGGTTAG
GTTCGTCTAGATTAATCGTGATGAGGTCATTGTAATATTGATCAAGAACC
TTTGGAACCAAATCTTTAGAATCTCGGATGTTCATTACTTTATGTTCCAG
CTGATCataaaaacatatttcataACATTCATCAGTGTGGAATTCTCTCA
ATAACATGTCAAAGAATTTAAGCCACTCATTTCTAGGATGAACTTCGACA
GGATTAACATTGTCAGCGCGGACCAACACTTTATACATTACGAGTGGCTG
CCATACAACAATGATGCGAGTCTTGTCTACACAAAACGAAAAGTTTTCTG
CAAGTGAAAAAGTGACATTTCTAATGATCAATAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053558-exon-scaffold_233-1491911889:502748..503984 | TCONS_00053558-exon-scaffold_233-1491911889:502748..503984 | Clytia hemisphaerica | exon |
| TCONS_00053558-exon-scaffold_233-1510915933:502748..503984 | TCONS_00053558-exon-scaffold_233-1510915933:502748..503984 | Clytia hemisphaerica | exon |
| TCONS_00053558-exon-scaffold_233-1575043694:502748..503984 | TCONS_00053558-exon-scaffold_233-1575043694:502748..503984 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:502748..503984 + |
Blast
The following BLAST results are available for this feature:
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