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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053590 ID=TCONS_00053590|Name=TCONS_00053590|organism=Clytia hemisphaerica|type=transcript|length=1356bp
CCATCAGTGGAGAAAGTGGAAGGACCTTATCCATTCATGGCGCAACGAGA
TGATGGTACTGAATGTCCAGTCGTCCAAGATTTCACCTACGGAAAATATT
TGGGTAATTTGAAGTTGACTTTCGATGAAAATGGTAAATTGTTATCAGCT
CAAGGAAATCCCATCATGTTGAATGTTTCTTATGCTGAAGATGAGGAAGT
TTTAAAAATGGTGGATGAAATGGACGACCCTATCATCAAAGCAAGAATGA
AGGCGATCGCTCCATTTGTCGTTTGAAGGAGTGCAACCTGGGAAATTTCT
TCGCAGATGCTTTGGTTGACGCCCAAGTGAAAAATCCTTCCACAGAACAA
TGGGCTGAAACTGTTCTCGCTATTTGGAATGGTGGTGGTATCAGATCTGG
AAATATTGATAGGAGTTTTGATGCGGATATAAGCCGTGAGGAACTAAACA
CGATTAGTCCTTTTGGAAATACAGCAGATGTCATGGAAATCAAAGGCAAA
TATCTACTTCAAGCATTTGAACATGGATTCTCGGGTATCGACACCAAAGA
AGGGCGGTTCCCACAAGTATCAGgATTTCGTATACTGTACGATAAGACGA
AGCCAGTTGGAAGACGCTTGGTTAGAGCTTTAGCTTTATGTAACAAATGT
CGTGTTCCCAAATACgaagaaatcaaagaagaaCAAATTTACAAGGTCGT
TTCTTCGGATTATTTGATCAGTGGAGGTGATGGATACAGTATGTTTCTGA
ACAAAGAGAGTTCCACTAAAGGTGAAGATGCACTGGAAGTGTTGGAGAAG
TACTTCCAAAAGATGTCGCCAGTCACCACCCCTGATGAAGGGCGGACAAT
TGAAGTCAGCACCAGCAAGGATTACACCAAGACAGACGACGATTGTTCAT
CTGCATCCTTCATCTCGTTCAACCCTATCTTCATTGTTGTCGTTTTGTTC
ATATCCTACTTTATTTAGTGAATGAAGTATTCGGTCcttcaatattgaaa
tcatatgTAATACTTTAAAtgtaatattttaaacaaacttGTGGATACTG
TTCCTCTCCTAGATTCTCATGAAGCTATCTTTGAGCACACACCATGTGAC
AGACCCGGTggcactggaaaattgactttggtgtCATCCCCATCTGAAAT
TCCATTGATAATAtcgcactccaaaaccatccatTCATTCTGGAGTTTTT
AAGCTTGAAGCGAatgaatttctatccccattgtaAATTTGATCGAAATT
ATATCGCGATGAGCTCCACTGGGAGCACTGAGATAGAGATGTTTTAGTTA
TCGTCTCCATTTTACTTGGAAGAAATTTATGTAAAATGTATGTCTATATA
TTGAGT Run BLAST on NCBI transcript from alignment at scaffold_233:887524..907058+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053590 ID=TCONS_00053590|Name=TCONS_00053590|organism=Clytia hemisphaerica|type=transcript|length=19535bp|location=Sequence derived from alignment at scaffold_233:887524..907058+ (Clytia hemisphaerica)
CCATCAGTGGAGAAAGTGGAAGGACCTTATCCATTCATGGCGCAACGAGA
TGATGGTACTGAATGTCCAGTCGTCCAAGATTTCACCTACGGAAAATATT
TGGGTAATTTGAAGTTGACTTTCGATGAAAATGGTAAATTGTTATCAGCT
CAAGGAAATCCCATCATGTTGAATGTTTCTTATGCTGAAGATGAGGAAGT
TTTAAAAATGGTGGATGAAATGGACGACCCTATCATCAAAGCAAGAATGG
TAATTGTTTTAAGATAAGCTTTAGAAACGCAAAGAACAGGCTTTTAGAAT
CTgccaacttaaaaaaaaaatcctcaaaTCTAGATTCATATTTAAAGTTT
CCTTGTGAttatgaaactaattttctttatttattatcaaaataaaacca
aataCACCCTCGTCCACGCCTTACAGGTTAAGGAGATTCATACCCCTTAA
TACATCTTTTTTTATTAAGGATCCCATTGGTCGTTCATATGTCCGTTTAG
AAGGCGATCGCTCCATTTGTCGTTTGAAGGAGTGCAACCTGGGAAATTTC
TTCGCAGATGCTTTGGTTGACGCCCAAGTGAAAAATCCTTCCACAGAACA
ATGGGCTGAAACTGTTCTCGCTATTTGGAATGGTGGTGGTATCAGATCTG
GAAATATTGATAGGAGTTTTGATGGTATGGATAACTTCTTGATGATTTGA
TGCTCGATTTTTGACTTAACTTTCATTTAACTTCTTTATTCCTTGTATGT
AAGATGAAACCACTCGTTTTGAAATTAgggaaaattttaataatttttga
gaattctaaatttcaaattttggtatTTATTCTGTACTTAAACTTTACGT
AATCAAAAAGAAACGAGAAGGATTTGAGCTTACCTTGCTTTTATTTCATC
ATTTAAGCGGATATAAGCCGTGAGGAACTAAACACGATTAGTCCTTTTGG
AAATACAGCAGATGTCATGGAAATCAAAGGCAAATATCTACTTCAAGCAT
TTGAACATGGATTCTCGGGTATCGACACCAAAGAAGGGCGGTTCCCACAA
GTATCAGGTTTGTTTTCTACACCCTCTTGTGTCAAATTTTCAGATCGTAC
ttcgtttgaatttttttttgtaagggccGAAATGGCCTGCCTAAATGGTG
AATATCATAGAGTCTTGCaccttttaattttcaaaaattaacttgtttgt
tcttttttttaggATTTCGTATACTGTACGATAAGACGAAGCCAGTTGGA
AGACGCTTGGTTAGAGCTTTAGCTTTATGTAACAAATGTCGTGTTCCCAA
ATACgaagaaatcaaagaagaaCAAATTTACAAGGTGTGTATTTGCATAA
CCTAAATGGtttctaataaaagaaatttaGATCATTTGAGAAACTTTGAT
CTACGCAAAACGAATTTAAATGTGTGTGGTTTCTAACAATATTCTAGCAA
AAGTAATTGGTTTCGAATATAGAAGTCCTAAAATATAACTTATGAATTat
aattagaaatatttcgTATTTTGATCTAGATTCGAGTATCTACTGTAAAC
GATTTGTGTTCAAATATGAATTTTAGTCGGTAAAAAACATAAGTCAAATT
TTCCACATCAAAACACTATGTTCCTCTCATAAGTTACCCTGGGAATCCAa
tctcataatcttagaaaaaacaaaaaataactcgcctgcagggagatttt
tccctgcaatgcagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNcgcgaaagtactgctaagtaatacg
ccgaaagctggccaatcaggccgaacctgcattgcagggaaaaatctccc
tgcaggcgagttacctgcgccaagcctTAAACAAGCtctaaaaatatcat
aaactagactgtgaaaaaagtttaacactTGGATTTCCAGGCTANataat
ttatggaaaaagctgactctgcagaaaaaaggaaaacaaatgaaaatgaa
aacatagattcatttagaaacaaaatggctgttggctcaTCTTGGTTCAT
CtcacaaagttttaaaattatagagcttggtgcaggtagattagNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGGACAATAAAATGTGACGTC
ATAGAAAATTACAAAAGCCTCGAGGGACGTATAATAAAGATAACTATCCT
CCAAATGATGCTGGTGATTAAGGAATTGTTTACATCTACTTTCTTAATAG
TTGGTGACATCGAGCTACCTGGCGGACGGAGGGGACGGTTACACCATGCT
GAAGAAGAACGAAGGCCTCGTCAAAGGTGAAGATGCTTTAAACGCCCTCG
ACGCCTACTTTTAGCAAGATGTCGCCTGTCACCGCTAAAATTGAAGGGCG
GGTCATCGATATATCTACTGGTGATTTGTATAGACATTCTTCGTCAAGTG
CGTTGCGTTCAGGATCGATCAATGGCATGGTATTCTTTCTTTGTTTGGTG
TTTTGTCTGTTAAGATtataacagattttttgaatgtttgtttTGAGGTA
AGTAATGAGAAGTTCTCAGGAAAAGAAAATGGTAGACTTTGCTACGGTAC
ATTTGATCTGAGCTTGAGTGGTAGATCTAAAATGGAAGACATATATTGTA
TCATCAATGATTGACGATGGGTATCTGGTTGCCATACGAGCTCAAAATCT
GTTTGTGACTTTTTGATGAATAGCACCATATATCGCTACTTTCACGCTGC
TTCTTAATAAGATGAAAGAGGGATTTTAAGTATTATGAATATAAACAGcg
taacaaaatattttctgtcTTGTTTGAATTATGTAACTTAAGGCGAGTCC
TTCGAAAAGTCCAAACCTTTTAAAGGtctgtttccatcgatcgcgcgagc
gtgTACCCTAGgccaaaatttcctaaaatagattttctgatggaaatcaa
acattgatcgcgcggagtgtgcggccaaatctattttaagaattttggcc
TAGCGTGCACGGTCCCGCGATCGATTGAAACAGGCCCTAATGAAATTGAT
GTTTAATTAACCCTTTAaatgccaatgtcgtatatatcagacatggccta
tgtaggagggcgaagccctgccctcctgtaatgcccagtttgagttagaa
atcgtcatttttggtccaactcgtaggaattggattgggcttcatggtca
agcaaaaagcaatcaaaagggagtctttccagcgagattttagtaaaaac
aaatgcaaaaatttgacaaaaatccacttttttcagattttgaccgtttt
tgaccatttttagtcaacgagtgatccaataACCTCTaaatttggccctg
ctttacttgattctgttctccagcgaattaatttgaagttttaccactgg
gaacctttctatcattcaggcaggtcctcGCAGCGGGCTATGAacaagct
tctaactccttctagatccggagatataagctgaaaagggccaaaattcg
cgagaatcgcgaaagtttctgctcgcgaaagtttgtacgcctaaagtaaa
cTCGGTGAAACTCCAACTAACTTTGCTTTTTCACTTAAATAAATTTCCTT
TTTGCGAGGAATAAGGAATAAGATCAGGCCTTGGAATAAGATTCAATATC
ACTTATGGTTTCCCGCAAAGTAAGCAAAAGAGAATTCGACCCAGTTCATC
atttataattttgattttgataaaattttaattaaatttatgattttttt
ttcattttgaatatttgaaaataaattatggGTACAGAAAAGGATATTTT
GAATTGCATAATTTGCTGTTTAGGAGTTATATGAAGCTTATATAACGCTA
TTAAGATGATAATCAATTGGACTGTACACATCATCGCGCTACCTTTACAT
TCATTAATCGATATCCACTGTGTGttaataattgataaaatcaaaactgc
tcatttttttttttaatctaaccTGTATACAATATATAGCACCTTGCCAA
ATTTACGTAACTTTTGCAAATAAATTAGAACATTTTGTGTAAAAAGCTCT
CATTTGCAAAATCATTTTTCTCGTTTCAAGATATTAGAAGAAGAATATTA
ACTAGATATCACTTTGGTGAGTTTGATGTTGAGATATTGGGTGCTAATAT
GGTCAATTTTGTCTCTCTATGTTATCTCGTGGCTTTTATAGCACTTGGAA
AAACCTCCNTCAATCTTGTCTCTCTATGTTATCTCGTGGCTTTTATAGCA
CTTGGAGAAACCTCTAAACCGAATCAATGGCATGGTGTCTTTTGGGAAGT
AGAACCCTACATCAAATACAACTCATCGCTGGGGATTTACGAAGGAATCT
TTCCTACcattttcttgaaagcaatAAGCTACTGTAACATCTCACAGAAT
CGTATCTTATCCTATGACGTTAGCCTTAAATCGAGAAATGAATTCCAAAA
GACGCTTGAATCAAAAACACTTAAAGGGGATGGAATTCTCGCTAACATTT
CCAGTTCCAATGCTGCAGCATGGTTTCCACACGATGTAGACAAAATCAAG
AAAGGGCCGTTCGCTTTTCTGAGGAGAAATTTGACAGTCATGGTTGGTGT
TTCAAGTGAGGGTTTAGCTGTAATTCAACCAAGGTCAAGAATCTGGCTTC
CCAATAAAATTCTACAAGGGATTCCGTACTGCTATACCATTATCATTATC
GCCGTCATGTTCGCAGTGTACGCTGGTTTGTTGCTATGGGTTTTTGAGCG
GTCCTCCAATGATAATTTCAAAACATCAGGTGGCCCGATGTTGGGTTTGT
ATTGGAGTTTCGTTACTATGACAACGGTTGGATATGGAGATATCGTTGCC
GTAAGTTTTTTCGGTCGAGTTCTTTCCGTCATTTGGATGTTTGTTGGATT
AATTATGGCAGCTATGTTGACTGCTACACTGACCAATGTGGTTACAGGAA
CGGAAGGTTTGAGTATCGAGGGGCAGGAAGTGGCTGTTGTTCGAGACTCG
CACGAAGAACGATATGTTCAGCTTGATTATTTCGCTAAACCAAAACTTTA
TGATAcctatgatgacgtcattaatgCAGTTCGCGAGGAGAAAGTGTACG
CGGCGGTTTTACCACACGACGTCGCAACATGGCGCCAACATGACATTCGA
AACCCCAATGTTAAGAATCCGTTGGTTATTACGGGAGAACTGGATGGTCA
GGTGCCGTTCGATTTCCTAGTCCATAAAGACGCCTTCCCAAAAAGTGAGG
AAATTATGGACTGCATATTCAGCAAGTACAAATACGAAATTATTACATCA
ACGATGGATATGTATAAACGAAGACTGATCATTGAAACGCTTTATTATGG
AAACGCGGACCAGATTTTCGAAGATAATCTTCCTGTACAAATAGGGATTG
GGCTTGCTGTTGCAGCTTTGTTTGTGAGCTTGCTTATAACTCTATACAAC
CGAAGTCACCAAAAGACTTCTATTTCAGTtagagaaaagaaagaaaagat
tgaagCTGTGTTTGACGAGATGCTGGTATTAATGCGAGATTATCGGGAAT
TTGTGAAAGTCAAAGATAATGGTGTGCTCGATCTTAAAGACGAAATTAAA
ATCAATATCGAAAAAACAGGCTGAACACTGATGCTCCGAATCTATGCCTT
GGAGAAGAAAATCAGTTCGGAGAATACATCCGAAAATGGCATGATAAATA
CTGATATATCTGAGGAAGGATGGCAAACGATAGTATATACAgctcttttt
ttctatttatctATAATTTATTTGTGTAAAATGTATATACTTTCATGTCC
AatatttatttgaaataataatCATTGATTTacttaattattaaagaaag
aaaatatgtaaaataaaTTATGTATAAATATAGGGCCCAGCCCCTCtttt
aaaaaagtataaaattgaTCTACTAATACTTCCACCTTTGTTGGTGAATG
TTCATTAAAAGATCACCATAACTCCATCCGATTTTCCTTGCTGCAATGGC
CGTCAAACTATCTTGGTTCTGTCGATGAGGTCTACAAGCTCCTGTGATGT
TTGGCTTCATATTGAGGTCTAATAACCAATACTTGCCTTCTTCATCTGCT
CTGCTGTCGATTCGTATGGGTGCCCTGGCGCCTACCAAACtaaaagcttt
ttcacattctGCGTATACTATTTGGATTTCTTTTGATTCTAGTTCATGAT
CTTCGAGGACGGAGCTGTTCTCGGAGACAGCAACATCGCCATTCGAAGGT
GCGATTCCGTTGACATGGTTGAATCGTTTCACAGCTGGCAAAGACCATGG
TGTACTTTTTTCCACTGTTTTATTCCCAATGAAGTATCTACCAGGAGGCA
TGACTGTAACAGTGATTTCTTGCCCTTCAAGATAGTTTTCAATGTACAAA
GCATTGCCGAATTCTTTGGCTGAAAACAATCGATTCAACTGCTCATTCAT
TTCCTCTTGATTTCGAACCACAACAACTCCTTGACTACCTCGTCCCCGAA
CTGGTTTAATGATGCATGGGAAATGGAAATCTTGTGGTAAATCACACATC
TGTTGGATTGAAACAAGTCTTTGAGGTTGAACTGACAGTCCATTTGCTTT
CAACAATCCACTGGTCAACATCTTATCATCATATTTGTCCAAATTGTTCG
GTGATTGACCAACAAACTCGATATCTTTCCCGAAGAAGCTTTCCACAGGG
TGTCCCTTATAAAGCACTGTATTCAACCAAAAACAAGTGGCTCCTTTCTT
TAAAGCTTCTGCTATTCCTTCCTTGTTGTCCGGAAACACCCAATCAAAGT
CTTGATCCACTGAAGGGACAGAGTTAGCAGTGATGATAGGTACTTTAAAC
TTCTGTAGCTGGTAAGCAATATCGGCACCACTATCTGAATAGCCGCCAGG
TTTCATTGGTTTTTGAATCCCATTCACCAACGGTGGGAGTTTGGATTGAT
ATAGAATGGCTAGTCTTTGAAGAAGTCTTCTTGAAGGCTGCATATTGAAA
GTGAATATATTTTCTTTGACTTTGACTCTTGCTGTCATGCATCGTTTGCT
TTCCTTTTTATACCCTTTctacagaacaacaaaaatgCAAAGTATGAAGG
ATTGCGAGACATGTTTGTGTTCTTTACCAGGAACtgtcaaatttttcagc
aaTTCTCGACATATTTACACATATAAAATTCCCTTAACTGAAAcgtgatt
ttgaaattatttagaTAAACCTTAGTGACTGACACTATTTAAACAAAATG
TTTACTTAAACGATTCAAGTAAAGCAATACTCTGGCCAAAATGCGTCAAA
AATGCTTAGTAGATTCATTTTGTTACAAATCTCTCTTTTAATCGATATTT
GGGATTACCCTTGAAGTTTCGcttcttaatcaagttttttcTACTTTCAA
CTTTAATGACCTTTACAGCCATTGATATCGTCACAGAGCCAAGCTATCAT
GCGATATCCTGGTTCACCATCTGTAAACATTTGAATCGACCCAGAATAAG
GCGCGATGAAAACTTTATAATGAAAAGTTGATTTCCGGGGTGAGCAATGT
GTCAAGATGTCTTGTAATGTACTATATTAAAAGCTTCCCAACATATCACG
GCCTACTCATTCTAAAGAGTCGTGACTATGTCAGTCAGGAACAATCAACT
AATTAGGGCGTTGTCCTGGTAAGGACGGTGTAGATTAAGTCACCATTTCG
ATGTCCTTATAGGGACGTTCTAAACTTTAATCTCATTTTCAGATGTTTTA
AAGCTAAAAGCGCATTCTAGAAGCCTTTACCAATGGAAAAAGAAACAACC
TTAATTtgacaaattgaaaaaaaatcattaaaattgatCGGTGCGTTATT
TCAGAATCTATCATTTACTGTGCACTTATTTCACCCTGCCACAACAAGGC
TACCATTATGAAATTTCTATGTTATCAGGCTCTGAATACATCAGAATTAT
TCGGTTTTTAGACATGTAAAAATATGGGCATTAAAGCCTTAAAGAATAAT
TAAAGATTCCATCAATGAAACCTTTTGAAACTCACTCTATGGAATCATTT
TCTTGTACTCTTTCCAATTGTAGTGCTTAGAATTTGCGCCGCTTTCGGCG
TTTCAAGATATTAGCCCGGTGACTTATAAGgacatcaaaatcactttata
AGGACATTGGTGTCTcgaactcaaaattttagaaaaattaaaattacttc
aacatacaaagttctaaaattttagagtaaGGTGCACCTAAAACAGTCTG
aaacagtttgtttgatactgtctgtgagtgaacccttgtttacaaaagcc
taaaaattatACTAATAAGCACATTATAAACTCAACATTAAGCATCAATA
AAAAATCTCTAATACTGTTAAAACTGTctaaaacaataataaaaagcCAG
CCTGCAATGTTTTGGTGTTCTTCATACTTCACAAAAAGttgttcaaataa
aaaatttgttaTAATATGACGGATGGGTCTATcgaaaaaaccgcgaaagt
cTTAAAGAGCGGTTGGGCTCGCATCGACCAATAATCATTTGCATCCTCAG
ATTTGGATACAAGTGATTCAGGGAAACCAGATCGTAAACAACagacaaaa
atataatttaatttaatttaatttttttttttaatttatagaagtgtatt
tctcaggtctattgacctctatgaaacaatcttacatctttacaatttat
agatcttatcattccattcgtttgtcaattctaaTTTCAATTTCCCTACG
GACGGTGCATTTACAACATTGGTTGCCAAACCGTTCCAAGTATCAATGCT
CCTATAGTAAAGTGAATTCGTTTGGTATCCTCTAATGCCGTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTACGCCGG
ATCTTGAGGCTGGGTAGGTTCATGACTTGTAAACGTTCTTCATATGAATG
GTTTCTATAACCACCGACAAGTCTTGTGGCCCTACGTTGGATACTTTCAA
TTGCATCAGAGTGTTTGATCAGCCATGGAGACCAAAGGTGAGGTctcaca
aatgcaatgaaaagtgtGCGGTGCATCTTGGGAGAAAGGAAGTCGAAGCT
TCTGTTAATTAATCCAACGATCGAGTTAGCCTTCTTGATCTTGGTGTAGA
TGTGTTCTTCGAAATTCAATTCACTATCAATAATCACTCCAACATCCTTC
TCTTGATCAAAATGTTCTAGGACAGAGCCAGCGATCTCATAAGGATGTGC
ATGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCATCTTCAGcgtta
tttatttcttcaacaAGCTTTGTGTCATCGGCAAAGAGGAACATTTCTGA
GTTGGTAACTTCAGCtagatcattgatgtaaataacGAAACTaatagact
gtgaaatagtttatagtcaggatatccaggctaggtatAGCACTAAAGGT
TCATAACCCATTCCCGCAAAGGTCCACTAAGTATGCATACTGCCATGAGG
AGGGAAATGTCTATGTTACAGTGTTTCCGCTGctaaatattttaagaaaa
tattttatattttgaccaattGAATAcctttcttttcaacttttaggcca
cctgaacattttttcctcagcggggataaaaattccaattgaaattcaaa
tgggGATATAAGTTCTATTGTTCGAAGGGTAAAAAATCctgtggggatgg
ttttggagtgtagTTTTTAACATTGATTTTCGGTtaggataaaatcaaag
tcaatttcccagtgaggctgaaattcacaggtattttcctaccggggacg
aaatttctCCCAAATGTTCcggtggggctggggtcccagcgggtttgtga
cacaggggtgcaCCTGAAGTTGATATTATTCATCTATTATTAGGGGGGGG
tccaaaaatgactttttttggaaattttgatgtttaaccatcttttttaa
attaatttttcatgcCNtccaaaaatgaaatgaaattttgatgtttaacc
atctttttaaaattaatttttcatgctgattccgaatttgaaaTCCGTTT
TTCCATATCTCTTACCTCTGGGCGGCTACCGGAGACCCTTTTTTCGGAAA
ACCGCCCAAAACCGCTAAAAgtcaatgtttttgaaattttccattttgaa
tagctttctaatgatgtgatatcttttttaaatcagtttttcatgctgat
tccgaatCTGAAATTCATTTTATCATAGCTCTCACCCTTGGCCTGGTATA
GGAGGctgtttttttactaaaatcttGGAATCCAAGGAAAATAGATAAct
tgaaaatgtttgaatttgaatgaaaaatttaatgataacAACTTGTTTTA
GAtcaagttttcatgctgatttcaaatttcaaattagtttCTGCACATCT
CCTGCCACTGACCTGCTACGGGGCCGGCTATATGAGGTTCTTTATTcaga
aaatattgcaaaaaatgtgcaAAAATCGATATTATTGAAAGGATATTTCT
AAGCTTTTAGTTCGTCTGTGGCTTTTTGACACTTGGCTAATGTTATACAT
TCATCGTCATAGGGTGTCTTGAGTACTTTATCTTTATCCAATGAGCTATA
CTGCTGTACTGCTGCTATGAATTTATCTGCTCAACTAGTCATGAAGCAAA
ATTCAACCTGCTTAGAATCTCGTTTAAACTATCTTGAGCTAGTGAACTCC
TTTCGAATACAATGATTCCCTAAATTAATTGAACATTGAAAAGTTGATAA
TTGTTTTAGGAAGCCTTAATCATTTAAGGGGtaagttaaaattaaaatca
cTAGGCTAAGCTATCTCTTATACAGATAGCTAATATAtgggatttttcaa
ataattttaattcaaaCAAGGCATATAAGAACAGGTTTATAGTGAATTTA
TTGAAAGATACCAATGTTTAAGAAGTATAACCTATTCCTAAAAAGTAACT
TCCAAACAAATGGACCAATATGAAAGCATTTACATGGTTTTAAGGGATGG
ATAAAACAATAGCGCCTTTCGATTGGTTCAATAAACAATTATTCGAATGT
AGGATTTTTAGATTCTATTTATTCGGTATAAGGTCTATACATTCCTATGA
TTTTCATTGTAACTTAACCTTTCAAACAATGATATACAGCTTGTTAAAAC
CAATATCAACTTTTGAATGTCCAATGCGGACGATCATTGCATTTGGAAGA
AGTTTACTAGCTCAAgatatttttaacaatttgaTTTTTACGTCTTTGAT
TATATTCTAAGCAGACAAATTAAAAGCAGCTCAGTCCATAGGGTTGCATC
ATTGCATAAAGTGCTCAAAACTTTGTAACAAGGAATGTATAACCAGATGT
TTTGATAAATGGAATCCAAGTACAAGAATCtccttcaaaaatattcattt
cagtacatttttgcgatattttcTGAATGAGGAACCTCATGTAGCCGGCC
CCGTAGCAGGCCATGGGTATGAGATATGCAAAAACTGATTTGGaattcgg
aatcagcatgaaaatctGATCTAAAACAAGTTGTtatatcattaaatttt
tcattcaaagttcattcaaattcaaacattttcaaattatcaattttcct
tggattttcgaagattttagtaaaaaaacagCCTTCTATACCAGGCCAAG
GGTGAGAGCTatgacaaaatgaatttcagattcggaatcagcatgaaaaa
ctgatttaaaaaagatatcacatcactagaaagctattcaaaatggaaaa
ttttagagatatggaaaaacggatttcaaattcggaatcagcatgaaaaa
ttaatttaaaaaagatggttaaactcaaaaagtgtaATTTTGGACCCCCC
CTACTATAAtcttttttcgttatttttgtttagaataaataataaaaatt
ggCAAGTTATCACAAGTGAATGGACGATTCATGTTTCTAACAGTACGTTT
TCTAATCCCAAGTTCCTGTGGATGGAATGTTGAACATTTTTGTTTTATCT
ACATGGGTATCACTGATCATTACCCGAAATACGCCTTTTCAATAATCGTT
TCATTAAAAGTTAATCATTGAACGAATGATAATAATGCAATGATTTCGAT
ATGCGAGCGCTTCATCTCAAGGTTCAACCGTGGTCATTTTAATATcagtt
caaattttgaaaatgaacttACTAACGATCATATTGATCAGACCACAAAT
TATTGCAATAGCATGACATTAACTAGGCTGATATCTATTACCTTACTAAT
TGCAAAGCAATTTTCTTTCTTGAGACTTTAACAAAATATCTGGATTTATT
ctatacccgggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccgggg
ggggggggtacttaggcaaaaatggatgatgggtatgtacGGACGGTAAG
GATCGGTTGCAAAAGTTGCAGATCAGCATGCAGATTGGTAATTGGTGTAA
TCAGGATcaatttgaaatgattttgatgttATGATTAAATTAATTGCTTA
ACAATAGTACAATCTTCAGCCATCATTAATTTGTTTTGGAACAAAAGGGA
TGGTCAGAAATCACAACTCGTTTGTTCATTCGTCGTGGCATTGTGGTGTT
GGCTGTTCGTTCTTGGTAAGTTCTCTATTATTCTCTAATCACTCTCATAA
ACTGAAAATGTTTCCTCTGTCGAAAATGGTCATCAACTACACTCATTATC
ATAGCCTTTTTAAATTATCAGGGCTATCGATTGTACGTTAATGGTGATCA
TTCTAAAAATTCGAATGGATTCGACCATGCTGCATGCGATGAGTTTCGAC
TTATGACGTCGTCGTTTCTTTAAATGTAATTCCAAGACAACCTAAAtcag
aagaaaatatttttagctaAAGCCATGAGAACactttgtaaatatttctt
ggaGCACGGTGTGTCATGACAGTTTTCGAAAGGCTAGGTTTGAAATCTCG
AGTCTTCAAGAATTTTCAACTACAATACAACAGCTGTAGTtatgaaatgg
aaaattttattaaaggttttgtttttaaataagtctgatatcgtttgctt
actatactcatcaattttaattcacaagctttttcacgttggattgacat
ggatgtggagtaagattggccagaaagatgaaaagaaaaacatctttttg
cttatatcagcataacataacaaggactacactgtcctgatatgaaataa
gtgtctgatatgaaacggaaacacttctgtaaaaataaaacctttaatcc
gTTATGTTGAAGTCGAGAAAATTGgatgatgttttttttcaaagtctaTA
AAGTGAACTGTTTGTCTGGACATTATTTCCAAGTTGATTCTCCAGATCTT
GATCTTAATCCTTTCCCTAAAAAGGAAGACTTAATTGGATAGAAAACATC
AGattaattgaaataaaaacattgtcAATTGACATTTGAGGCGTGTGGAA
CCAAAATAAATCATTAAAGAACAACATAACATTTTAAGCTTTTGTGGTCG
AGGGTGgttaattaaaattgaaaaaaagcttCAATGACATGAACTTTTGG
CTTTAGTGAGATATTTGAATGAATATATTACACTCACTTTTTTGAAcatt
tatttgattttcagttttagCATTTGAGACAAAATGTACCAAGCCTCTTT
GTTGTGGATTGCTTTCAACTTAGCGATCTGTTTCGCCGCAAATTTCGAGT
TGACGGTTTTACACACGAATGACGTACACGCGCATATCGAACAATTTAAC
GTTTACGGTGGTACGTGTACTCCGGAAGACGCCGCTGGTAATAAATGTTA
CGGCGGTGTAGCACGGAGACAAACAGTGATCGAAGAATTACGTAAGACCA
TCCCCAACACAATTCTTATTGATGGAGGTGATCAATTTGCTGGCACTCTG
TGGTTTACTATTTACAAAGGAAAAGCTGCTTTGAGATTCATGAATTACAT
CAAGTATGACGCAATGGTAGGTCCTATTTCTCCCTTTTTTAAGCTTATCC
AAACTGCTCTTCTGTGGCAATTCTCTCCAGAATGTGCATCCTTTATCTCT
TCTTCCATCTCATAAATGGGCTCCAAGAGTCTTTAATGTCTAGACAAGGG
AAAAGACTTCAACCATAGCAGGAACTTTTAATCCACCAAAGTTATCTTTT
TACTATGTAGTGGGGGTTTAGAAATGATTCCCTATAGTCAACCTTGTACA
ATTATCTGGTGTAGATATTTTCTCTTATCACCTTACAAAAtacttttaca
atttttctgTTTACTACAGGCAATTGGTAACCACGAATTTGACAATGGTG
ATCAAAACTTGATCGATTTCATGAAAAATACATCTTTCCCCATCGTTTGC
ACAAATATGGATGTGTCCAAGCAAACGGATTGGCCAGATCCTCCAATTTA
TAAACCTTCCACAATTTTGGAAAGAGGAGGCAAGAAGATCGGTATCATTG
GATACACAACTCCCGATATTACTTGGTATGTATTCATGAATatgaatttt
cgaattttttccgAAACTTGTATCTAGAGTCTTCATTTGAATTTTAACTC
TTAAGAGAGTTCTcgggatttatttatttattttttatcaaactattgaa
aatatCCGAAAAGCTGTTTTCCGGTTGTTGTTTTGACAAGTTATAATTTC
TTAAGCTGAgaagatattcaaaatgaacCAACAATGGTGACGTTTTATTT
TTGTGACAATAGAAATCTTAAACTGAGACATTCCTATTTTGTAGGCTCTC
AAAACCAGGCCCAAACATTAAATTCAGCGATCCTGTGGAGTCGGTCAGAG
CAGAAGCCCAGAAATTGAAAGCTCAGGGGGTCAATATTTTGATTGCATTG
GGTCACGCTGGATATGCAAAGGATCAAGAAATAGCAAGATCAGTAAAAGA
ACTTGACTTGGTTGTCGGAGGACACACAAACACCTTTTTGTGGAATGGTA
AGAAATctatttatttttactttttggtcccaaaaaattgttcaataaat
ttaaagcattttttaaCCAAAAGGTAACGAATCTAGTCATTTTTTGAGTT
AGCTTTTGATCTTCCATGAAATCTTATTATTGTCAAAATTCATTAAATCT
CATAATTTTCTCTTATTCAGGACCCCAACCATCAGTGGAGAAAGTGGAAG
GACCTTATCCATTCATGGCGCAACGAGATGATGGTACTGAATGTCCAGTC
GTCCAAGATTTCACTTACGGAAAATATTTGGGTAATTTGAAGTTGACTTT
CGATGAAAATGGTAAATTGTTATCAGCTCAAGGAAATCCCATCATGTTGA
ATGCTTCTTATGTTGAAGATGAGGAAGTTTTAAAAATGGTGGATGAAATG
GACGACCCCATCATCAAAGCAAGAATGGTAATTGTTTTAAGATAAGCTTT
AGAAACGCAAAGAACAGGCTTTTAGAATCTgccaacttaaaaaaaaaatc
ctcaaaTCTAGATTCATATTTAAAGTTTCCTTGTGAttatgaaactaatt
ttctttatttattatcaaaataaaaccaaataCACCCTCGTCCACGCCTT
ACAGGTTAAGGAGATTCATACCCCTTAATACATCTTTTTTTATTAAGGAT
CCCATTGGTCGTTCATATGTCCGTTTAGAAGGCGATCGCTCCATTTGTCG
TTTGAAGGAGTGCAACCTGGGAAATTTCTTCGCAGATGCTTTGGTTGACG
CCCAAGTGAAAAATCCTTCCACAGAACAATGGGCTGAAACTGTTCTCGCT
ATCTGGAATGGTGGTGGTATCAGATCTGGAAATATTGACAAAAGATTTGA
TGGTAATTCTTTTAGTCCTGGAGAAAAGTTTTATTGCACCTTTACTTCAA
CATCATATTGTACGGTTACTCTGATCTCAAACAAGATTGAATAAAATCTT
GAAGTTTTTGTTCCTAACAGACCATGCGCTATCAATTTCTATCATTACAT
AAATAGTCTTCTATTTCACACATGCTTGAGCAAGGGAATTTATTTCAGGT
AAtgcatattttccaaattcTTTGTCAGATAAATCACGAAGTTGAATATT
TGCTACGGTATCCACGTAGAAACTTTACTACAACTTTTTAATAtctgtaa
attttatttttttcgtttttcatacAGAGCAAATCAATAGAGAAGATCTC
AGCACCATCAGTCCTTTCGGAAATACAGCTGACCTCATGGAAATCAAAGG
CAAATATCTACTTCAAGCATTTGAACATGGATTTTCTGGTATTGAAAACA
ACGAAGGACGATATCCCCAAGTATCAGGTATTAATTCCTCTCTTTTCTTT
GAAGGTACAGAATGACATTTACAGGTTAATAAGATAATGCACTAAGCTGG
ATTATATCAACGAGTCTTTGATTTTGTCCAGACGTTTCTACTTGGTGTCA
AGAAAAAGAGAAGCTCAAATTATCAAGAAATAAGATAAGAAATTAATTAT
GTCCCGTTTCTTCATCctctttcatcttcattttaatcTTTATGATGAAT
CGACTCAAGATTATCCTTTTCACAAGGTTACATTCGAGACCAATACAttg
ttctcaacatgttcttattttcaccattttgtgggtGTATTTGcccattt
ccctaagaaatcgggtgttttagagtctgtaaagccttaacttgttctta
atacttCGGCCATCGTAGCCTAATATTCTTACAGAAAATACATGAATAGC
AAAATgcaatcatagtataagaaagccgcggctggaatgataacatctga
atttctgttgctctatctctgtcgtatttgatgactatttgttgatcaag
aaatcagtaatgtagcatcttcgattgtaaattttattggtttgtcgtta
atacttacttatCAGTGCGTTTtaaacattaatgatatgcccttgataat
acagttgcattataaaatcattgtaaaggaaagatcaacaacaagaaatt
taaacaagcacaaaattgctgggctgaaagaactcaaatattaataaagt
gcctccgaatgccttcacaatatttcagtgaaatctttttaaaaatcaat
gaaaaagtacgtcaagataatactgtgaaaatttcaagccagcaccctcA
AACCACCCCTagaatatgtccaaaattagttcaagtgttctattggatac
agattcaaagatatttaccaataaaaaaactttttatgaaggaaaatgag
agaaaaatttcaaaaactatctaccaataataaactgagcatcttgatgt
tcttataaagctcggagacagagatggaacagcaattaaataaaaagaca
gtgcggtacatattccagccgcagctttcttatactatgatgcAATGACT
GTCAAttaaaaaatagccaaaaactAAAGAATTCtcgtcatcaaaacaaa
gtatTAATCCACTTACAAGCTAGAAGAGATCAAATTACTGCAACTTAATT
TCTTCATCATTATGACCACACGTCTTACCGCAAAACTTAATTAAAGATGT
TGATAGTGCAGAATCAGGCTTGAGAAGCAATTGATAAGCGTATTAGAGAG
TATGTAAACTCTACAGTGATGAATGTCATAAgtaaggtttatttttctta
ggaTTTCGTGTCACCTACGATAAGACGAAGCCAGTTGGAAGTCGCTTGAT
CAGAGTTTTAGCTTTATGTAACAAATGTCGCGTTCCTAAATACgaagaaa
tcaaagaagaacaaatctataaggtttgtttattttttttactattGTGC
AGTGATCTCTGATTTAGGTTAGGGCATATTCCCATTTTTGGGAAGGTGTa
tgtcttgtcttgtcttgttTATTTGCTACCATCTCCATTGAACGAATGAG
AAAAATGGTTTGCCCTTGATTGACcctgaagaaaagaaaaaagacatGAT
TTTTCGATTCTACTGTTTCGTAGTAACATCACCAACTGGGACTTGTAGAT
CGTGAACAAAGTCCAGTCTAGCATCATACAACCTTACCCCGTGACCCTCT
CCTGCATTGTACAGAGCTGCTAAACTTTTCTGGTATTCtaaacaagaaag
cctaagcggTGTAAAGGCCCAGCAGCGTTGGTAGTGTCAACATATTTTTC
GTTGCAGAGTCGCCATAGAACTTAATTTGCAGGAGTGAATTTTTTCGCAT
ACGTCTGCATGCGCACAATAGAAAGTCAGATAATTCGATTTTTAACCTAG
ACTCATCAATTGATTATTGCGCGCATGGGCCCTGACAAAGTCAAATCTTT
TCGACCAGTTGTGTTTTAAAGGCCTATTCCGTTGCGCCCTGGGCCAACTA
AATCATCTATACACAAGTTATTTATGTGTTagttttttggatgtttttca
tTTGTGGCGAATGTTTTCTTTCAGGTCGTTTCTTCGGATTATTTGATCAG
TGGAGGTGATGGATACAGTATGTTTCTGAACAAAGAGAGTTCCACTAAAG
GTGAAGATGCACTGGAAGTGTTGGAGAAGTACTTCCAAAAGATGTCGCCA
GTCACCACCCCTGATGAAGGGCGGACAATTGAAGTCAGCACCAGCAAGGA
TTACACCAAGACAGACGACGATTGTTCATCTGCATCCTTCATCTCGTTCA
ACCCTATCTTCATTGTTGTCGTTTTGTTCATATCCTACTTTATTTAGTGA
ATGAAGTATTCGGTCcttcaatattgaaatcatatgTAATACTTTAAAtg
taatattttaaacaaacttGTGGATACTGTTCCTCTCCTAGATTCTCATG
AAGCTATCTTTGAGCACACACCATGTGACAGACCCGGTggcactggaaaa
ttgactttggtgtCATCCCCATCTGAAATTCCATTGATAATAtcgcactc
caaaaccatccatTCATTCTGGAGTTTTTAAGCTTGAAGCGAatgaattt
ctatccccattgtaAATTTGATCGAAATTATATCGCGATGAGCTCCACTG
GGAGCACTGAGATAGAGATGTTTTAGTTATCGTCTCCATTTTACTTGGAA
GAAATTTATGTAAAATGTATGTCTATATATTGAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053590-exon-scaffold_233-1491911889:887524..887772 | TCONS_00053590-exon-scaffold_233-1491911889:887524..887772 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1510915933:887524..887772 | TCONS_00053590-exon-scaffold_233-1510915933:887524..887772 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1575043694:887524..887772 | TCONS_00053590-exon-scaffold_233-1575043694:887524..887772 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1491911889:888024..888197 | TCONS_00053590-exon-scaffold_233-1491911889:888024..888197 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1510915933:888024..888197 | TCONS_00053590-exon-scaffold_233-1510915933:888024..888197 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1575043694:888024..888197 | TCONS_00053590-exon-scaffold_233-1575043694:888024..888197 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1491911889:888431..888580 | TCONS_00053590-exon-scaffold_233-1491911889:888431..888580 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1510915933:888431..888580 | TCONS_00053590-exon-scaffold_233-1510915933:888431..888580 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1575043694:888431..888580 | TCONS_00053590-exon-scaffold_233-1575043694:888431..888580 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1491911889:888736..888857 | TCONS_00053590-exon-scaffold_233-1491911889:888736..888857 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1510915933:888736..888857 | TCONS_00053590-exon-scaffold_233-1510915933:888736..888857 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1575043694:888736..888857 | TCONS_00053590-exon-scaffold_233-1575043694:888736..888857 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1491911889:906398..907058 | TCONS_00053590-exon-scaffold_233-1491911889:906398..907058 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1510915933:906398..907058 | TCONS_00053590-exon-scaffold_233-1510915933:906398..907058 | Clytia hemisphaerica | exon |
| TCONS_00053590-exon-scaffold_233-1575043694:906398..907058 | TCONS_00053590-exon-scaffold_233-1575043694:906398..907058 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:887524..907058 + |
Blast
BLAST of TCONS_00053590 vs. Swiss-Prot (Human)
Match: 5NTD (5'-nucleotidase OS=Homo sapiens GN=NT5E PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.788e-47 Identity = 72/200 (36.00%), Postives = 112/200 (56.00%), Query Frame = 3
Query: 249 EGDRSICRLKECNLGNFFADALVDAQVKNPSTEQWAETVLAIWNGGGIRSGNIDRSFDADISREELNTISPFGNTADVMEIKGKYLLQAFEHGFSGIDTKEGRFPQVSGFRILYDKTKPVGRRLVRALALCNKCRVPXXXXXXXXXXXXVVSSDYLISGGDGYSMFLNK-ESSTKGEDALEVLEKYFQKMSPVTTPDEGR 845
+G CR +ECN+GN DA+++ +++ W + I NGGGIRS ID + I+ E L + PFG T D++++KG L +AFEH G F QV G ++YD ++ G R+V+ LC KCRVP Y+ +K +++YKV+ ++L +GGDG+ M ++ G+ + V+ Y KM + EGR
Sbjct: 347 DGSSQSCRFRECNMGNLICDAMINNNLRHTDEMFWNHVSMCILNGGGIRSP-IDERNNGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTKCRVPSYDPLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKMKVIYPAVEGR 545 HSP 2 Score: 77.411 bits (189), Expect = 1.788e-47 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 PSVEKVEGPYPFMAQRDDGTECPVVQDFTYGKYLGNLKLTFDENGKLLSAQGNPIMLNVSYAEDEEV 201
PS E G YPF+ DDG + PVVQ + +GKYLG LK+ FDE G ++S+ GNPI+LN S ED +
Sbjct: 254 PSKEVPAGKYPFIVTSDDGRKVPVVQAYAFGKYLGYLKIEFDERGNVISSHGNPILLNSSIPEDPSI 320
The following BLAST results are available for this feature:
|
