TCONS_00053603 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053603
Unique NameTCONS_00053603
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length624

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053603 ID=TCONS_00053603|Name=TCONS_00053603|organism=Clytia hemisphaerica|type=transcript|length=624bp
AAAAgtaatataaaatcaaaatgacaaatgaaaaagtaaCAGCAGTACCA
ATTGAAGACGAGAAAGTCAAAGAATGGGTTGAACACATGTACAGTATAGG
CGAGGACGAGTTGCGAATGATCAAACCTTACAATCAAGTCCTTCGTAAAC
GTTATATGGAGATACACGATGATATACAGAATTTCCAAACAAGAGAGGAT
GACGTATTCATATGCACTGCTCCCAAATCAGGTACGCGTTGGATGCAAGA
AGTCATGTGGTGTTTACGTAATGATTGCGACTTCGAGAAAGCCAACAAGG
TTCCCTTAGATTTCAGGACACCCTACATAGACGCCAAGGCAGTTGCACCG
GATGGGACCTTTACAGAAAATCTCGtcgaaaaaatctcaaagatGGAAGG
ACCAAGATCCATCAAGACACATTTGTCTTATGACATGTTACCAAAATCTC
TCCGCGAAGACCAAATAGGAAAAATCGTTTCAGTCATTCGTAATCCTCGT
GACATTTGTGCTTCATTCTGTCATCACTTCAAACTCACCGACAAATACAC
AGGAGGTGTTGAACTTCTGGCTGATGTTTATATGCGTGATGTTGGACTTT
TCTATGGACCTCATTTCACCAACG
Run BLAST on NCBI

transcript from alignment at scaffold_233:1218185..1235019+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053603 ID=TCONS_00053603|Name=TCONS_00053603|organism=Clytia hemisphaerica|type=transcript|length=16835bp|location=Sequence derived from alignment at scaffold_233:1218185..1235019+ (Clytia hemisphaerica)
AAAAgtaatataaaatcaaaatgacaaatgaaaaagtaaCAGCAGTACCA
ATTGAAGACGAGAAAGTCAAAGAATGGGTTGAACACATGTACAGTATAGG
CGAGGACGAGTTGCGAATGATCAAACCTTACAATCAAGTCCTTCGTAAAC
GTTATATGGAGATACACGATGATATACAGAATTTCCAAACAAGAGAGGAT
GACGTATTCATATGCACTGCTCCCAAATCAGGTGAATTCTTAATACTACT
TCAAAGTAGAAAGGGTTATAATTTCTAACGAAAACGTATACTATATAATA
AGGAAAATTGCTCATCTGTTTCATATAATATATGATATGATTACTCATAT
CAGATGATGTGCAGATAACCTGCTGAAAGTATCATAAAGATGTATATTAT
CATAAAGATGTATACCTTTTCAGGTACGCGTTGGATGCAAGAAGTCATGT
GGTGTTTACGTAATGATTGCGACTTCGAGAAAGCCAACAAGGTTCCCTTA
GATTTCAGGACACCCTACATAGAGTATGTGAaactaaaatatctttttat
ctcCACAGTGAAGTCTCCTTAGATCGAACACGTACAATGGAGTCGCCGAC
TTGTTCAAATTATAGAGATTAGAGTTACAGGGACTTCACACTTCACTGTA
ATGATACTCAAAAATAGTTACCTTTATAATCTTATAAGCAATTCATAGAC
TTTGTTGTTGAGCACAGACCCTTTTTCTCCAGCTCATCATAAGCGAATat
atatgtatgtatgtatgtatgtaatagtttatttcaagttgacgcTAGCT
CAGCACTCAATGCTTTGAGCACCCTTGATAGTCTAATAAAGAATACCAAG
TATGGATTATTGGCaccacaaacaacaaagaataaCTGAAAGACTATCGC
CAATGGGAAATAGAATCACTTaattcccgctcaaaaaaaatctgattcaa
atattttatactgtctcgcaggcaaaaaaaaatataatgcaGTATGCTTC
GGTACCTTGTCTACAAGAATAAAGCTGATATACAGGATAAGGAAAAAGCA
ATACAGATCTGTTGATGTAGTCCAAATTCCACTTTTCCTAAAGAAAATGT
ATGACAGCTGAACCCAAAATAACTAGCAAAAACAATCcaaggaaaaaaaa
taatacGGCAAAACCAAtggtaaaaataaaatgatggtAATAGTTCAAAA
CAATACTCGAATTATGCCACTATCCGAGCCTAGTGTAAAAACTGCCACTT
AGTACACACCCATCCAGCCAATGCCACAAACCTTAGTAACTATGTCCATC
CGACTTACAAAGTATATAAGACGAAtccaataaaatgacaaatctGGTAC
CAATATTGTAAAGGTACATAAGTAGCTCAGTTTCGATACATAGGTGAGTC
CTCGTGtcttaaaaaatattattttgttacATTCTTGGGCAATAAACAAA
ATCACAACCAATCTATTTTATGATTTGTTTTAATTTCAGCGCCAAGGCAG
TTGCACCGGATGGGACCTTTACAGAAAATCTCGtcgaaaaaatctcaaag
atGGAAGGACCAAGATCCATCAAGACACATTTGTCTTATGACATGTTACC
AAAATCTCTCCGCGAAGACCAAATAGGAAAAGTATAACAAAACACACCCT
TTTATCATATCTTTTATTTCTAGGTTCTAATGAGACTCAATTTAGAAAGC
AAATTGAAACAAATTAATTTGACCTGAAGAAAATGATACTGAAAATCTTC
ACTGTTAGGTTATCTTAGTAAGAGAATTGCAGCAATTATAGGGAAAGGAA
ACTAATTTAAGAGGTTTAATTCCGGCAAGATCTCCTTTGTTCTTGTCTTT
ACTTTGGTTAGTAATGAATGTGTAGGAATCTCTCTCTCATTCTCTCACTT
CTCTCTCACACTTGCATCCTCTAACGGATTTGTGCTCCTATATACTTTTG
TGGTTTTTTGTAGCGATTCAGACAACATTACTATGATACGTAATTCATGT
CATCAACGAGGACTTATCAACAGCGCAATGACCTAAACGTagtaccccct
tctcacagtcccactgggacccctactgaaaaaatttaccaaaatgtcGC
CCTCAGTGGAAAATTAAGCTCtaatttttgtctccactgaagatgatcag
ataagcaaatcctcactgcaaaatattgtccGATATTTccacactgaatt
ttctggctcgaaaaaAATGGGATTCAAATTCCCAGCCATAAAAAGCGCGG
AAATATCAATCCTGATCGAGTTTTGGTCCTTATTTTTAACCCCTATAGGC
CGAAACAATCTTCCCAAGTCTGTGAGAAATGGTGATTCAAACTCATGATT
TTTCGTAATCTTAGTAGTCTGCTTTATCGACTAAACCTTTACCGGAAACT
CATTCGGGGATTGACAATTTAATGAGCTAataattccactctttttttaG
ATCGTTTCAGTCATTCGTAATCCTCGTGACATTTGTGCTTCATTCTGTCA
TCACTTCAAACTCACCGACAAATACACAGGAGGTGTTGAACTACTGGCTG
ATGTTTATATGCGTGATGTCGGACCTTTCTATGGACCTCATTTTACCAAC
GTGTTAAGCTATTGGAGCCGTCGAGAACAGGTATATATTTGAGTCGAACC
TGATCAAAAATTAGGTGAACCtagtaaaaatatttaaaaggtTTCTATAC
ATCgctggaaagataattttatcagcttttcgAATGAGGGGTAAGTCAAT
TTGTAGGTGCTGAAGAAAAAAGTTGTGGtaggtgacgtcatcaaaaagga
CAAAATACAAGTTCTCATTTTCGGAGTATTTTTCCATGAATCTCATTTCA
CAAACTTTAGTTGATTTATTTGAACCGGAGATAACAGGTAGTGAAAAACC
AGTAGGGATCATCACCCAATCCAACTGATGGGAATAGCGCAACAAACTTG
ATTATGAATAACTGGAAAAACTACTTGAGTTTGACgtttcaatagacgat
atcggatttagataaatgcaatgcattctggtttctagggactctcaaag
gaattataatagatcaattataatagNGAATCAATGTAAGAGTgttaata
tttctttattataTACTTTTGATCCCGAATTGTCTATGTTTGAAAGGATT
ATATAATGATTACTTAAAAAGAGTTTTTCAGATTTATTTGCTTGGatatt
tgaaattcttttaGAAGGATTTCTATCGGATAGTACAATCCGTGGGACAA
GAAAACAAGATATTTTACTCTTAAaaggaggggccaaagtcagaATTTTT
GAGAATTGCATCCGCAGTTTGACACAAATCTGGTCTGCCTACCACGCTAA
TGAACCCAATACCCGTGATTGTAGTTTCAATATATGGAGGAAGAAGGCTT
AAGAGTTGTTCAAACTGCGTCTTAAAAATAATATGCGCAGTAGAGTCAGG
GCGTCAGAGGGGTTAACGAAAAATATAGTGGCAGTAGAGTTTGGAGCATT
GTTaacacctccgccactgttTACTCCGCCCCGGGCTAACCActaattcc
aaaatttttcccGCCTCCTAAACTATTGCCTTTTTAGTAATCTTGTGTAG
ACCATAGGATCGTCTAGGATATGCTCTAATAATATCTACTTCTAAATCTT
TCAGATGATTAAACGTTCACAAAACAATACAGAAGAAAAAGGAACATTCA
TCAACAAAGGCAAAACAGGTGGTTGGAAGACTGCTTTCACTCAAGAAACT
ATTCAAAGATTTGAAGAATGGGAAAAGAAACATTTAGAAGGAACTGGACT
AGCCTTCATTTACGAATTATAGAAAAGTGGGTATAGCAAATGAAGAAGGT
AACGGCCTTAAGAAAAATCACATTATATAAAGAGAAGAACTCTTGTTCGT
TGGAACAAACAGtataatttgaataaataagatacaattcatcaattttg
aataataataaaatgaatattgttaaaataatatttgataacacagaata
aaataatttttgcaataacAAAATTGAAGTGCACATAGTAAAAAATATGT
CCTTCTCCCTTTATACCTAAAGTTTGAAAAGTAAACCCTttcagatatga
atgtttggtaattttgaaaagtaaacgACAAAATCTAAGATTTCAACCCT
AATAATTGTCCTAAAGTCACCACCAAAagttgaccctgtcagatacacat
ctttaCGATTATTAAAGTTGGGACCCTGACAGATATCTTCAGAACCTGAA
AaataccctgaccagcggcacgtctacttacccaattttgcctgaaTAAC
CCATTCGTGGCTTTCTATAACTTTGGAGCGAGTGATCATTTGGGTACAAA
GGTTATTAATTATCACCAGTGACATGCTATCAGAATTAAAGTAGTATaag
caaggatttattatacactggatatacaagtaacagatttttgccgattt
ctcgtgtactagctatgtccgcagtaatgatattattgttcactctcctt
ccctcattaaatgttttttcgaaggatttttattgcatttcttatcgaaa
accactcatccaattcccaaaagagacttaaaactttcctgtgagagtca
gattcttccacttaattgataattataagtcgttgtgacgtttcaagctg
tgagaaagatgcaaaagacgtgttgtgtataagaaattgaatgttaacac
cggaaattttcaaacttcaacctcataaaaaccaccttgccaccacgtgc
ctccaaaggattttcataccacagtggagccaagacactcaagtcttatg
tatgctAATTTCAGCTCTTCTGGGGACAGTCTTGGAAAGATATTTCCAAT
agcgcaccgcgctgaatctaaatatagatctcatttttgacataatcatt
actctcgatgtgtttgtacgagtttcaatcccatcaacctttgcgttgat
ctcttttgcacgttaattgcatcgtttgacaaaagatatataacagcttg
cacgtatttttaattgagccgcattgAATTATGGGATTgtaactcgtaca
aatgtcaaaaaaagtgaaaagtaataatatgacgtatgcgttgcggagcg
ctattgaaaatttcgtgtcactataagcattttgtctgaatttcttgtct
aatgatgattttctcacaccagatttcacaaatgtatccagcttggtATG
Ttagccttactttcaaactttttttctgtaaatgtacaaaaagaaagagc
tagagaacttttttaaaataagactgataaacatttttttaaatcagaca
tcttcgagccaccatgacagttgtcctttgcggacaaagcttgaacatca
attgttttctgaaacaataaaaatacaatgatcgctctccatcgttttat
gagtcgtttatccagtgtataataaatctttggtaTAAGCATCCGCTAAT
GTCACAATACAAGTAATCAAGGCTGTTTCCCCATTTGTACTTTCAAGATT
TAACCCTACATATACATGTAACACTTGCCTTTCTCAGATAGAAAACCTAT
TTTACTGTTGAAGATGTTGAAGAAAGTTCAAGTGTCTGATAGTTTTGGTA
AAGACAATATTTTCTGTATTTGAATTCACTAATCAAGATTCTACCAGATA
TTTACCCTGACTCTATTAGAAAACATGAAATAGTCACATGAAATTACCAA
AACAATTCCAAGAAAGTCCACTTTTTCATTATAATAcattataatattat
tttgcTCATGAGAAAACGCCCTTCTGGTAGGGGGTAGTTTTATAACTTCT
TCCATTCTTAATTCTAACACTAcattttaattttgtatttgtaCATGATA
CGATCAATGTCAAAATCATATGTAATACTTTTGCTGCGAGTTAAGTTTCC
AACCTGCCAGATAATGATAATTTGGTTTTTCTTGCGATAAGTGTtctaat
tttaccaaaaaatttaatttatttttttcatcgattcaaaaaaaaatgaa
tttattattGTTCTTTTGGCGCTTCATAGTCACGTGATGTTAGACTTTAA
AAAGGGCGGCTGTCCGAAGCTATTCACAGGTTGTTAGATTGTTACGAAGT
GCAAGATGAACAGGAAAGAGCACAAAGAGTACTTTGACGTGAAATTTAGG
TCCTTACATAAGGATCTTAAGGTTGGCGAGAACGTGAATCAGAATTCAAA
TTCAAGTCGAAGCAAAAACAAGTTGAGTTTAATAACAACATTAAAGAGGA
CGTCGAGGGTTTATTGGGGCTGATTGAGGCTGGTTCAAAGAAGAGATCTT
CCACTTTGGCCAAGCAGATCATCGAAATTAGCTGATAAAGATTGCTGATA
AGTCTCCAGCTGGCTGGGCCACTGTTAGGGAGTACGATTCAGATAGCGTG
GCAGACGACAGCTCAGATGACACAAAAGAtaagtgtttttcttttgattt
taaactaaagtttttaagaaatgCATTTGATGCATTTGATAGCACTGAAT
TAGATTCAGGGGCTGTTAAAGGAAGGCTTAAGAAACAACATTATAGATAG
GAGCTAATAAATTTATTCTGAGCGTTATAAAAGAAGGTTACAAAATTGCC
TTTTCTATCCTCTCCGACCGAAAGTTTTCGTTCAAATAATCATTCTGCTT
TCGACAACACTgcttttgtgacgtcatcaataaaTGAACTTCATCAATTT
GGATCAGTTACTGAGATACTCGTCCTTCTGGCAAGCATTATTCTNGTCGA
TAAATGAATTTCATCAATCTGGATTAGTTACTGAGATACTCGTCCTTCTG
GCAAGCATTATTCTCGACATTCGACATGTCAATAGATTTTTGATCAAGGA
GCATATTAAGTTTGACGATTGGCGCGAATTCCAACATTTTGTACGTCCTG
ACggttttctttccaaattttcttgGGATTTTCTTGGGAACTGGAAAAGA
AGCCAAGATTTTTTGTACTTACAGTGTTACCATTTGGGTTATCTACGGCC
CCAGCCTTTTTTACGAAACTTTTAAGACCACTCGTTTCTACATGGCATTC
ACAAGGCGTAAAATTATCTGTTTACCTGGATGACGGAGCTTGTATAAACT
ACCCGTACGAATCTGCCGTTCAACCTTCGAAGTTAGTGAAAAGCCTCTTA
GATAATACTAGTCTACtagtaaatgaagaaaaatcggAATGGGAGCCCAC
CCAAAGAATGACCTGGCTAGGAATAGAGctaaatacttttgaaaatacTT
ACAAAGTTACAGAGGAGCGTGTCTCCTCTCTCCTCTCTTCGATTGCTAAG
TTATTAAATAATCCTCTTAAAACTGCTTGAATTCTTTCTCGTGTTGCTGG
AAAAGtagtttcaatgaaatttgttTTGTCAAACCTAATTAGATTGCAAA
CTAGAAGCATTTACAGATGTATTGCGGTAACCTCTTGGGATGGTAAACTG
AACATTTTGAGATTATATTTTGGAGagataatatgtctatgttaaACAAA
AGGAGCACAATTAgcatttgtcaaaacaaaattgttaTAAAGTCTGATGC
AAGCGATCATGGTATAGGTGCTATTTTTATTTGAAGCAAGTGGACGAAAA
GAATGTTTTCGTATGTTTGACGAAGGAGAAGTATCTAAAAACTCGACTTG
GCGCGAACTTGAAGCTATTCGATTTAGTCTTCAATCCTTTGCACCTAAAA
TATCAGGAAAGTCTATTTCTTGGCAAACCTAAGATATCAGGGAAGTCTAT
TTCTTGGCAAACCGAAAATATGGcagcaaaaaatttatttgctcGAGTGG
TAGTAGCAGTCTCTAGCTATAAATATTAACGATCTATCAAGTCTTTTCAA
TATAGACTTAGAAGTACGCTGGATATCATCTAGACGTTTCAATGTCTCTG
CTGACTACATTTCTAAGTTAGTAGACACCGATGATTGGGAGATCACAGAC
GAATTCTTTGAACTTATAGATAGTTTATGGGGTCCCCTGAATATTGATAG
ATTTGCTAGTTATAATAACACTAAATGTGAGCGATTCAACTCGAAATTCT
ACGTTCCTGGGACGGAAGCGGTGGATACATTTACGCAGGATTGGCGTTTT
GAAAACAACCGTTGGGTTCCCCCGGCTAATTTAATCACCCGGGTGCTGAG
AACTATCATATCTACGTATGGTATTAGAGTAGTTTTGATAATTCCGTATT
TGCGTTCCGCTCCATTTTGGTGACTGCTTCAAAACGGACcgatattttga
agttttgtaGTCGATCATATGGTTTTCAAAGCTACTGCTGGTATCCTGAA
GTTGGGCAACTACAAGTATTCCCTTCTCGGTTCTCCACATTATCGTGGAG
AATTGTGGCATTTTTAATAAAGAGTCGAGTTTTGGGTTCTGGGCCTATTT
GATAAGCTGCCCCACCTTCCCAAGTACTTTCGCCCAGTTGGGCAGGGTTA
GCCTTAGAGGTAACCCATTATTCCTTAGATTTTAGAAACTAGATGGGGTC
CTCCTATGCTCAACCGGGTTGAGAGAAATAAAAAGTGTAACTGGGTTACA
CCGTGGCTGGGCCACTTGCTCAGAAGGTTTTGTAAGAAAAATTGGCCTTA
TCAGGTTATTTAACCCAAGCTGACTAATTCTGCATTTTTAGGATCCAGCT
CGCTTCAAATCGTTAACCAGGTACAGGATGACCACCTGAAGTAACTAGCA
CACGGTTTACAAGACGTGCTGTCGAAATCAAGAGCGAATAACACGATTAG
AAAATATGCTACCTACTTCAAGTGTTGGTCAAACTGGAGTGCAAAGTTCG
ATGAAGTTGTTGAATTCCCTGCCAAAGACACGTACACGTGGTGCTGTTTT
TTGTCAGCCTCATACAGTCAGGAATATCATTCTCAGTGTTCGAAAGCTGC
TTTTACGCAATCAAACACACTCATAATGTCAATAACCAACCTGACCCAAC
TGATTCAGTATTGGCCAGTTATGCCTTAGAGGCAGCAAAACGTACTTGTT
CTAAGCCTGAAACGAGTGTACGAATCCATTATTGAGGAGGATCAGCAGTC
CCAAGTCTTATGAAACGAATTGAGGTCAATGAAAAGCTATTTGGGACCCA
CAGCATTTGTCGTGGAGGAGCCACATGTGCCGCCAACAACGGGGTAAAGG
ATCGTCTTTTCCAGAAACACGGTTAGATGGAAATCTGTTAGATGATAATC
TGGAACAACTGATGTCTGTTTCTTTGGGGCTAGGCCTCTAAAAGTTTTAC
AGTATATAATGATTATTTAGAGCATTTGATGTCTAATTCTGCGAGGCTAG
GCCTCTGGTgttatttcttatatttttcaatcgtGTTCTTCTGTTACAAC
TATTTACAGGGTTTTCTAGACGACCCACTAACGTGATAAGAAGAGATGAa
agtaaaatgataaataaagttattttcgttTTGTGGTCTTAGTGCAACAC
ACTTGACAAGGTTTGGAACGAAGAATGAATTCGATTTACGTGAATGTCTT
TAGCGTtcaaactgaatgaaaataaattaagaGTAATAAATATTTGATTG
ACAAAATTAAAGTAGAAATTAAAATGGATGACAATAAGACTTGAATGAAT
TGACCTAACTTAAATTAATCGTATTTTTAGAAGatgaaaatcagaaataa
acATAATTTAGATAAAACTAGCCTAAACTATCCTAACCTTAGTGGTCACT
GACAAAGAAGTGAGAAGCCTGTGCCAAAAGGGCAGATGTGAAAGTCTAGC
AAAGTTGAGCCAACTGAAGTCcacaaaagaaaacagaaaaggaCAAAAGC
TTACCGGCTGGCCCAATGTGAATTACTGTGATGAGTGACCAGGTTGTGTA
TAACCAACTGGGTTAAACAcatgaaaatgactgaaaagtCTGAGTGAAAT
ATCAACACTCAACCAACATGcaaaatagtaaaatttgatatgaaagtTCT
CTTCACAACCTTACTGTAAAAGCTCTCaacattgaatgaaaattgaatgc
aaTAAATGAGANTTCTGAGTGAAATCTCAACACTCAACCAACATgcaaaa
tagtaaaattgaTATGAAAGTTCTCTTCACAACCTTACTGTAAAAGCTCT
CaacattgaatgaaaattgaatgcaataaatgagaaaaaactGAGGAGAA
AATTGCTCCCTAATTATATAAATTCATTAAAGTGAGAAAAAGTATCTGGA
GTaattataaaacaaaagaaaataaatctaaAGTGTGAATGACATATAAA
TTAATTGAcagtaaaattaaacaaacaaatgaaatttttaattgattttt
aagtttttacattttttttgtagGAACACTTTCTGTATTCAAGTGTTCAC
ATGACACGTTTGAGTTtacgaattagaaaataaatgaatttattattgTT
CTTTTGGCGCTTCATAGTCACGTGATGTTAGACTTTAAAAAGGGCGGCTG
TCCGAAGCTATTCACAGGTTGTTAGATTGTTACGAAACCGCCCGCCCGCC
CACTTGTTAAGCTATTACGTCGTTACAGTCTCTCTGATTTCAAAGAGTCT
AGTCTTTGACCGCTTTAGTGCCATAGTATTAATATATTACTACATATATT
GGATTATATGATATTGATCTATAAAGAAGTGTTATTGTCAATAGTATTTA
TAAATATACATTTATATTTACTTTATTATCTTGCACATTTCGGGCTTTCT
AGACGACCCACTAACGTGATAAGAAGAGATGAaagtaaaatgataaataa
agttattttcgtttgagtttacgaattagaaaataaactAGCTTTAAAAA
TATGTCAAAGCTTGGAAAACTTGAACTAAAGTGTatagatataattggca
gtggaaacaagaatgcctgtaacttttgatagtccgaTATAATTGCGAAA
AATTCTTTTGCTTGGTTTAGAgaataaaaagctctatatttgaatgtatt
tttggttggaaaattcacgatttttagcggttaaatttgcgattgcaaaa
attgagcttttgtTTTTACTTATGCTAccacgttcatttttacaccagtg
gtagttcaaccttaggttaagaaggttgtcaaattggaaggcaaacggaa
aagtccttcggaagatatgggacccaaaATACCCCTTGTTAGCGCTTTCG
TGTGAAACATCAAATCTccatctttttaataaaaacgggggtagtgatga
tAAAACCGTTTTTcaatcataacacattttacgatctttttacgataatg
acctcatagccaaaacTGTGCTTAGTGTTTTGGGAAGTTTCAGAGTTCTT
TAattacttaaaaataacaaaggcaatacaAGTTCAATATGcttaaaatt
tcaataaaaacaatcaaattgtgatttcaattcgtttcgaaataatcaat
gataccaatgcatcaacacttaacactttccaatttttaattgcactgtt
caaaaaaagataacataacccccggtttcagtaaaaatttagattttcaa
tatttcacagaaaagtgctagcagggggtatttcgggtcccatatcttcc
caAGTTTCATGACAGTTCTCTGGTATATAAAGATAATTTGCATGTTTTGC
ATTCATAGATCGTTTCATGGCCATTCCGTTTACGTTTAGGTTCATCATTA
CACCTTCGAAACTCCAGCTCTGTGGTTGAACAAACTTTACAAACGCGttg
taaaaactttttcttgtgCTTATTTCAGGAACATAGGTATTTTGGTTAAA
AAGTGTCTGCATGTCAGTCTCTCATAATCCTCTGCTGTTGTATTGTTCAA
GTTATTTCTGACTTTATGCAAAACTGATTGATTTACAAGCTGACGAATTA
CTGACAATCGAAAATCAGTATGAGATAGCAGACTGTATAATTTTGATCGG
TACACCATGTCTGATTTTATGTTCTTTATATAATATGTACGAGTTTACCA
TACATACATTTAGAAGTCTGAAAACAACCTTTTTCCACCATTTCATTGTT
CTCTTTGATAAATGAGAATATTTCAATAACTGATCGTTAGCGTCTACACC
ACTCATGTATTTATTGTACTTGCTCATGACAAGCGGTTTCTGGATTGGTT
CACCTGTTCCGACCTCAAAAATCCATAGTGGCTCCTCCACGGCTCACTCA
CATTAGACTTTTAGCAtatactagccgtcacccggcgtcgcacccgccga
gtagagtgttgttgaacacatcaaaagccctttggatggtggaggagggt
aaaaattttttattgtaagCCCAAAGAACAAAATATTACCACTTTTCACT
GATCAAAACCCGGAAAACCGCATATTtcatgtttggtgacgtcattttgg
ccctaagtgacgtcatcgaaagggtaataaacttttcacttcactgaaat
caatttgtcatttatcaaaaagattctcttgatgatttccgatccaatga
ggggtcaaccattgcttaaatcctactcaaactcaagatattgtattttt
ccgtttttgatgacgtcatcggacccataAAGCCAGAGACGTTTATACCC
ACTCTTACCTTTCCTAACTTATTCTCTATTAAattcccgatccaatgagg
ggtcaaccatctcttaactcctttccaatctcgNAATAACCTTTTCCTAT
TTAcaacataataaaaattatggaacataaagtgttcttataaaataaag
agtCGGTttgtctaaaaagtgagtcggtctaaaaaagtgagtcggttggt
cggtctaaaagtgagtcggtcggtcggtctaaaaagtgagttggtcggtc
ggtctaaaaagtgagtgggtcggtcggtctaaaaaagtgagtcggtcggt
ctaaaaattgagtcggtcagtcggtctaaaaagtaAGTCGGTCcatcggt
ctaaaaagtgagtcggtccatcggtctaaaaagtgagtcggtcgatcagt
ctaaaaagtgagtcggtcgctCGGTCTAAAataaaagtgagtcggtcgct
CGGTCTTagaagtgaggcggtcggtcggtctacaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtcggtcggtctaaaaaagtgagtcggttg
gtcggtctaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtccgtcggtctaaaacgtgagtcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtcggtcggtctaaaacgtgagtcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgg
tcggtctaaaaagtgagtcggtcggtcggtctaaaacgtgagtcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgaggcgggcggtcggtctacaaagtgaggcggtcgg
tcggtctaaaacgtgagtcggtcagtcgttctaaaaagtgagtcggtcgc
tccgtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcgc
tcggtctaaaaagtgagtcggtcggtcggtccacaaagtgaggcggtcgg
ttggtctacaaagtgaggcggtcggtcggtatacaaagtgaggcggtccg
TTGGTCTACAAAGTGAGTCGGCCGGTCGGTCGTGGATACGaacatatttg
tgattgccgcctacaAAGAAAAGACTACCAAATTACTTGGATGTATTACC
ATGCAGCAAAAATATGCCACTCTCAATTTTCAAGAGGGCTAAAGTAAATG
TTTTCATTGGTCGGTCTttggtctttgtttattttgttaagaTTGTTGGT
TGCGATAAGCCCCATAATAATTTCTGAAGAACAACTGTACAAATCCATAA
CAAAATGTTCTCTATTTAAGAAACGGGATACCATGACCATTAGACCATTC
CCTATCCATGTACAAACGATGGCACCAGTGACCAGAGCAGAGAGACcaga
tcaatcaatcaatattaagaaaccaaagaaagaaaaagcaaaatagcTGT
CGAACTTCTTGCTATTCaatgttttatttacttttacgaaaattaccagt
aaagtagaatttcgaaaacggagatacgcttccgaaccgggcgacgtttc
ccgatcggcaaggaaccgTAGGGTTGTTTTCCGGTGACGTGTCTCAAAAG
AAATGtactccgcctcgaaaaaagaacactctactgttttcccgctcgga
gctcgatttaaaaagagacttggaaaataaatccataatggctcccccac
ggctcatagagaattagacttttagtatatagactagccgtcacccggcg
tcgcacccgccgagtagagtgttgttgaacacatcaaaagccctttggat
ggtgagGGAGGGTAATAGGCTTGAATTCTAAGtccaaagaacgaaatatt
accacCTATGACTGATTGAAGCTCGAGAAATCGCATATTTaatgtttggt
gacgtcatttgggccgtaaatgacgtcatcgaaaactGATGAATTGTTCA
CTTCTTTGAATGAAATGAATTAATTATTTACCCAAAAGATTATCtagatg
atttccgatccaatgggGGGTCNGATTATTTACCCAAAAGATTATCtaga
tgatttccgatccagtGAGGGGTCGatcattgcttaaatccttctcaaac
tcaaGATATCAGAttttcaggttttgatgacgtcatcggacccaaaatgc
ctcagtttgaatatatttattttcgaaaNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNATCCAAACagtcggtcacgtaactctcgaacc
cccatctcaaaaatccataatggctcccccacggctcatagaaaattaga
cttttagtatatagatagatagaagaTTCACGTGTAAAAgtaatataaaa
tcaaaatgacaaatgaaaaagtaaCAGCAGTACCAATTGAAGACGAGAAA
GTCAAAGCATGGGTTGAACACATGTACAGTATAGGCGAGGACGAGTTGCG
AATGATCAAACCTTACAATCAAGTCCTTCGTAAAGGTTATATGGAGATAC
ACGATGATATACAGAATTTCGAAACAAGAGAGGATGACGTATTCATATGC
ACTGCTCCCAAATCAGGTGAATTCTTAATACTACTTCAAAGTGGAAAGGG
TTATAATTTCTAACGAAGACGTATACTGTATTATaaggaaaaattttcat
ttgcttcctATAATAAATGATATGATTACTCATATCAGATAGTTTTCAAA
TATCATGCTGACAGTATCATAAAGATGTATATATAAGTTTGTGTTATAAT
TTCAGGTACGCGTTGGATGCAAGAAGTCTTGTGGTGTTTACGGAATGATT
GTGACTTCGAGAAAGCCAACAAGGTTTCCTTACAAGTTAGGACACCCTTT
TTAGAGTACGTGAAACTAAAATACCTCGTTGGGGCTTCGTTACCTTGCCT
ATAAAAATATACCGGCTTACATATGAGTCCTCGTGTCTTTCCAAAACTAT
TTTGTTAAATTATTGGGCCAATAAACAAAATCACAGCCAATCCATTTTAC
GGTTGTTTTAATTTCAGCGCGAAAGCAGTTTTACCGGTTGGAGCCtttac
agaaaatttttttgaaagaatctCAAAGATGGAAGGACCAAGAACTATCA
ATACACATTTTTGTTATGATATGTTACCCAAATCTCTTCACGAAGACCAA
AAAGGAAAAGTAAGACAAAATAACCCTTTTATCATATCTTTGATTTCTAG
GCTTTTCTTAGACTGAAGATGAAAATTACAAGGACATATCAACATCATAT
GAGGATTGGAATTAGATTTAAACTCATGATTTTTCGCAATTTTAGTACCC
TGGTCTATCGAATAGACCTTTCCCGGAGACTCATTCGGGAATTTACAATT
TAACGAGTCCATAATTCCACTTTTTTTTCCTCAGATCGTTTCAGTTATTC
GGAATCCTCGTGACATTTGTGCTTCATTCTGTCATCACTTCAAACTGACC
GACAAATACACAGGAGGTGTTGAACTTCTGGCTGATGTTTATATGCGTGA
TGTTGGACTTTTCTATGGACCTCATTTCACCAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033823XLOC_033823Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053603-exon-scaffold_233-1491911889:1218185..1218415TCONS_00053603-exon-scaffold_233-1491911889:1218185..1218415Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1510915933:1218185..1218415TCONS_00053603-exon-scaffold_233-1510915933:1218185..1218415Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1575043694:1218185..1218415TCONS_00053603-exon-scaffold_233-1575043694:1218185..1218415Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1491911889:1218608..1218707TCONS_00053603-exon-scaffold_233-1491911889:1218608..1218707Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1510915933:1218608..1218707TCONS_00053603-exon-scaffold_233-1510915933:1218608..1218707Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1575043694:1218608..1218707TCONS_00053603-exon-scaffold_233-1575043694:1218608..1218707Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1491911889:1219674..1219815TCONS_00053603-exon-scaffold_233-1491911889:1219674..1219815Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1510915933:1219674..1219815TCONS_00053603-exon-scaffold_233-1510915933:1219674..1219815Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1575043694:1219674..1219815TCONS_00053603-exon-scaffold_233-1575043694:1219674..1219815Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1491911889:1220635..1220716TCONS_00053603-exon-scaffold_233-1491911889:1220635..1220716Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1510915933:1220635..1220716TCONS_00053603-exon-scaffold_233-1510915933:1220635..1220716Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1575043694:1220635..1220716TCONS_00053603-exon-scaffold_233-1575043694:1220635..1220716Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1491911889:1234951..1235019TCONS_00053603-exon-scaffold_233-1491911889:1234951..1235019Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1510915933:1234951..1235019TCONS_00053603-exon-scaffold_233-1510915933:1234951..1235019Clytia hemisphaericaexon
TCONS_00053603-exon-scaffold_233-1575043694:1234951..1235019TCONS_00053603-exon-scaffold_233-1575043694:1234951..1235019Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1218185..1235019 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0422448	1.36943e-06	0	0.0866963	0	0	0	0	0.300813	0	0.158774	12.3861	10.7306	9.00386	9.32079	12.9359	16.1362	11.1285	15.1156	7.57861	8.86387	14.602	14.5125	24.471	25.6347	32.8661	45.7609	36.18	30.0005
Blast
[Close]
BLAST of TCONS_00053603 vs. Swiss-Prot (Human)
Match: ST1A2 (Sulfotransferase 1A2 OS=Homo sapiens GN=SULT1A2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.377e-21
Identity = 47/137 (34.31%), Postives = 74/137 (54.01%), Query Frame = 3 
Query:  141 LRKRYMEIHDDIQNFQTREDDVFICTAPKSGTRWMQEVMWCLRNDCDFEKANKVPLDFRTPYIDAKAVA-PDGTFTENLVEKISKMEGPRSIKTHLSYDMLPKSLREDQIGKIVSVIRNPRDICASFCHHFKLTDKY 548
            L K + E    +Q+FQ R DD+ I T PKSGT W+ +++  +    D EK ++ P+  R P+++ K    P G      +E +     PR +KTHL   +LP++L  DQ  K+V V RN +D+  S+ H + +   Y
Sbjct:   20 LIKYFAEALGPLQSFQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKVPGIPSG------METLKNTPAPRLLKTHLPLALLPQTLL-DQKVKVVYVARNAKDVAVSYYHFYHMAKVY 149
The following BLAST results are available for this feature:
BLAST of TCONS_00053603 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ST1A22.377e-2134.31Sulfotransferase 1A2 OS=Homo sapiens GN=SULT1A2 PE... [more]
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