TCONS_00053614 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053614
Unique NameTCONS_00053614
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2338

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053614 ID=TCONS_00053614|Name=TCONS_00053614|organism=Clytia hemisphaerica|type=transcript|length=2338bp
ACTTTAatggcagaaagtttcgcgatcGTTTTATTGATGGAAACAACTTT
CACGAATGGTTAGGGAAAATTTCTAAAGATTTTGTTCAGTCCAAGTAGAA
ATACCTGACTCAAAATCATTTGGTATTGTTTCGTTTTAGCGAtaaaaaag
aacagaaaaaacaagaaatctttaaaaaaataactaCAATGGCCAGCATC
AATGGTGACAACATCGTTCCGAACGAAGAACGAAATGAAAAATTGGTTCC
GTTCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACA
AAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATG
TATTTCAATAACAACGTTAAGTATGTTTTCGATGTCGATGTTTGTGCAGA
AAGTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACA
AAATTGACTgtTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTT
AAGCTAAAATCATTCAAATTACATTTAATCGATTATATGAAGACAGAATA
CGTATCAAAGTCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATG
CTGCTCGAAAGTATGAATTGACTACATTAATTGAAACAATTAGATCAAGG
TCTCTGCGCATCTTAGATTTGGAACTTCTAGCCAACGTACATTATACCTC
GCTGGAGAAAATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAAC
ATGTCAATATCAAAAATGATCCGGAGTTGCTTGCAATATTTCACCTCTTC
AAATTAATTATTCACAAATTTCAAATCCCCGACTTGGCttctaaaaaaga
tttcttaACCCACCGGATTCATGAGCACTTAATTGATTTTGAGTCAATTT
CCTACAAAAAGGGTTTTCCAAATTGTGTTGTCTTGGACGTTgagaacaaa
gaaattcatgTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAA
AGCAATGTTGAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTG
AACTTCCTGGCAAGAAATTCAATGAAGTTGTCTACTTTCTTCAATTTCTA
CACACACTTCAAGATATTAAAGATGACACTAATATTTGGGCTCTGGCACC
TTTGTGTCAAGAATATCAAGTGGATTGGCTGTCCAACAAAATACAGTCCT
TCATACGAAATTGTGCTAGAAACAGCACAAAGACAATTCTCAACTATTTA
GTGTTAGCTGAAGATATGCATTTTGGTATTGAAGTAGAAAggagtttggt
ttctaaactcTCAAGAGGGTTCCAAGATATCAGTATGTGCTTGGAATTTC
TCCTACTCAGCCGTCGAATGCAAGTTTGGATTGCAAGAAGAAAATTAGCT
GATTCTTTGAAGAAGTTTCTGATTGATCCGCACGATGATACTCTTTCCAG
GTATGGCAAGCAAACAACCCGAGAGAAAAAAGAGGCTGGGATAAAGAAAT
ATAAAGCAGTTGATGCTGACGTTGTTTCCATATTTCATGATCTAGATCAA
CCCAAAATCGAGCTTATAAATGCATAATGGCATACATAATCACAATTTTT
TGTTTCTGCCAGATTCTATTATATTAACAAAAagttctgttttatttacc
atgcattgggcttttccagaaaaaaaccgcacaccccctgttgaggaggt
ctatCCCTTTaaggctggaaatgctgtaaaccccctggaattccaggaaa
ttttagatttaaacCCCTCTGAAATTCTTAaatttagtaggatttaaaaa
gctaccccatggaattccagttatttttgacagatttttgtatctctcTA
TGGAATTCCACCACatatatcaaaccttacccccttggaacgaaagtgga
cctcctcaacaggggttttttttctggaaaaacacATTCTTAAAATGATT
CTgtccctttttttgaaaatactttttattAAATCATTGtgatcattttt
taaataaaaaacttatTGCCTCATTTCTTGccttttttggacatttttta
aaattgatgtttttgttttttgtccATAACTTCTGAACTAATAaagcaaa
tttcaaaaataatacaCCAAAgtttaagttaggctttcctttaaacaatt
caaaaaaaaaaaatgtaacttctttgtggcacacccggtatctCTTATGT
TATTCATTTATGTATAAGAAGTGGTTTATTTGAAAATGATAAGAGTTTAA
ATGTACAACATATGTATTAATTAAGTATAAATCTTGTTAAGAAATTCTAA
TCACTAATCAATCGAAACTGAAAGCCCCATTATTGAAA
Run BLAST on NCBI

protein sequence of TCONS_00053614-protein

>TCONS_00053614-protein ID=TCONS_00053614-protein|Name=TCONS_00053614-protein|organism=Clytia hemisphaerica|type=polypeptide|length=462bp
MASINGDNIVPNEERNEKLVPFDFHENECDVIIKTKDKEVQLPSSFLEMV
SSPMYFNNNVKYVFDVDVCAESVTKALSFYHPKDWTNKIDCSELDDLLLV
TNTLKLKSFKLHLIDYMKTEYVSKSKQFDENLLQVFHAARKYELTTLIET
IRSRSLRILDLELLANVHYTSLEKIYRCEILETSVYEHVNIKNDPELLAI
FHLFKLIIHKFQIPDLASKKDFLTHRIHEHLIDFESISYKKGFPNCVVLD
VENKEIHVSSYLLINNSPVFKAMLSSTNFKEGQNRRIELPGKKFNEVVYF
LQFLHTLQDIKDDTNIWALAPLCQEYQVDWLSNKIQSFIRNCARNSTKTI
LNYLVLAEDMHFGIEVERSLVSKLSRGFQDISMCLEFLLLSRRMQVWIAR
RKLADSLKKFLIDPHDDTLSRYGKQTTREKKEAGIKKYKAVDADVVSIFH
DLDQPKIELINA
Run BLAST on NCBI

transcript from alignment at scaffold_233:1447008..1450231+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053614 ID=TCONS_00053614|Name=TCONS_00053614|organism=Clytia hemisphaerica|type=transcript|length=3224bp|location=Sequence derived from alignment at scaffold_233:1447008..1450231+ (Clytia hemisphaerica)
ACTTTAatggcagaaagtttcgcgatcGTTTTATTGATGGAAACAACTTT CACGAATGGTTAGGGAAAATTTCTAAAGATTTTGTTCAGTCCAAGTAGAA ATACCTGACTCAAAATCATTTGGTATTGTTTCGTTTTAGCGAtaaaaaag aacagaaaaaacaagaaatctttaaaaaaataactaCAATGGCCAGCATC AATGGTGACAACATCGTTCCGAACGAAGAACGAAATGAAAAATTGGTTCC GTTCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACA AAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATG TATTTCAATAACAACGTTAAGTATGTTTTCGATGTCGATGTTTGTGCAGA AAGTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACA AAATTGACTGTAAGTTTCAGCTTTTTTCGCATTTTGAAAGTATCAATCAA AAGCCGTATTGCTTTGAATAAACACCCCGGGTGGCGTTCAAAGGTGGCGT TCATCGAAAATCTTTCCTCAAATTAGTAGATACAAGATAGGCCGATTCGC GAAATTCTATCTACGCGAAAAATTAAAGATCAGTGACTTTAATGTAGTAC CAAGAAGACTATTTTAGTTTAAACCTATAGAAAAGGTGCCAAGAGATTCT CATATTTTTATTTCTCATACAAATATGTTTTAATACTTTACTTtggattt tttgtatttttaggtTCGGAGTTGGATGATTTACTCTTAGTTACAAATAC GCTTAAGCTAAAATCATTCAAATTACATTTAATCGATTATATGAAGACAG AATACGTATCAAAGTCAAAGCAATTTGATGAGAATTATTTGCAagttttt catgctgctcaaaAGTATGAATTGACtacattaaccctttaagtgccgat gtcgtatatatacgacatgggctatataggagggcgaagccctcctgtaa tgcccagtttgagttagaaatcgttatNGAAAATTAAAGATCAGCGACTT TAAGGTAGTACCAAGaaggctattttagtttaaagcTATAGAAGGTGCCA AGAGATTCTCATATTTTTATTTCTCATACAAATATGTTTTAATACTTtgg attttttgtatttttaggtTCGGAGTTGGATGATTTACTCTTAGTTACAA ATACGCTTAAGCTAAAATCATTCAAATTACATTTAATCGAACATATGAAG ACAGAATACGTATCAAAGTCAAAGCAATTTGATGAGAATTTACTGCAAGT TTTTCATGCTGCTCGAAAGTATGAATTGACTACATTAATTGAAACAATTA GATCAAGGTCTCTGCGCATCTTAGATTTGGAACTTCTAGCCAACGTACAT TATACCTCGCTGGAGAAAATATATCGATGTGAAATTTTAGAGACCTCTGT ATATGAACATGTCAATATCAAAAATGATCCGGAGTTGCTTGCAATATTTC ACCTCTTCAAATTAATTATTCACAAATTTCAAATCCCCGACTTGGCttct aaaaaagatttcttaACCCACCGGATTCATGAGCACTTAATTGATTTTGA GTCAATTTCCTACAAAAAGGGTTTTCCAAATTGTGTTGTCTTGGACGTTg agaacaaagaaattcatgTCAGTTCGTATTTACTCATAAACAACTCTCCT GTATTCAAAGCAATGTTGAGTTCGACAAATTTCAAAGAAGGTCAAAACAG AAGGATTGAACTTCCTGGCAAGAAATTCAATGAAGTTGTCTACTTTCTTC AATTTCTACACACACTTCAAGATATTAAAGGTATTTTTGTGTACAATACT CTTGAAGTAACTTatcgttttttgaaaatttcccgaCCTTTTTTCGACCT TCACAAACAAATTATTTCTATAGTGTCTTTTCTAATCATCAATGGattta gattttcaaaatttccttctTGTTTTTTTACTGTTCGAATTTTCCTACCC ATTTGTAGATGACACTAATATTTGGGCTCTGGCACCTTTGTGTCAAGAAT ATCAAGTGGATTGGCTGTCCAACAAAATACAGTCCTTCATACGAAATTGT GCTAGAAACAGCACAAAGACAATTCTCAACTATTTAGTGTTAGCTGAAGA TATGCATTTTGGTATTGAAGTAGAAAggagtttggtttctaaactcTCAA GAGGGTTCCAAGATATCAGTATGTGCTTGGAATTTCTCCTACTCAGCCGT CGAATGCAAGTTTGGATTGCAAGAAGAAAATTAGCTGATTCTTTGAAGAA GTTTCTGATTGATCCGCACGATGATACTCTTTCCAGGTATGGCAAGCAAA CAACCCGAGAGAAAAAAGAGGCTGGGATAAAGAAATATAAAGCAGTTGAT GCTGACGTTGTTTCCATATTTCATGATCTAGATCAACCCAAAATCGAGCT TATAAATGCATAATGGCATACATAATCACAATTTTTTGTTTCTGCCAGAT TCTATTATATTAACAAAAagttctgttttatttaccatgcattgggcttt tccagaaaaaaaccgcacaccccctgttgaggaggtctatCCCTTTaagg ctggaaatgctgtaaaccccctggaattccaggaaattttagatttaaac CCCTCTGAAATTCTTAaatttagtaggatttaaaaagctaccccatggaa ttccagttatttttgacagatttttgtatctctcTATGGAATTCCACCAC atatatcaaaccttacccccttggaacgaaagtggacctcctcaacaggg gttttttttctggaaaaacacATTCTTAAAATGATTCTgtcccttttttt gaaaatactttttattAAATCATTGtgatcattttttaaataaaaaactt atTGCCTCATTTCTTGccttttttggacattttttaaaattgatgttttt gttttttgtccATAACTTCTGAACTAATAaagcaaatttcaaaaataata caCCAAAgtttaagttaggctttcctttaaacaattcaaaaaaaaaaaat gtaacttctttgtggcacacccggtatctCTTATGTTATTCATTTATGTA TAAGAAGTGGTTTATTTGAAAATGATAAGAGTTTAAATGTACAACATATG TATTAATTAAGTATAAATCTTGTTAAGAAATTCTAATCACTAATCAATCG AAACTGAAAGCCCCATTATTGAAA

Coding sequence (CDS) from alignment at scaffold_233:1447008..1450231+

>TCONS_00053614 ID=TCONS_00053614|Name=TCONS_00053614|organism=Clytia hemisphaerica|type=CDS|length=5556bp|location=Sequence derived from alignment at scaffold_233:1447008..1450231+ (Clytia hemisphaerica)
ATGGCCAGCATCAATGGTGACAACATCGTTCCGAACGAAGAACGAAATGA
AAAATTGGTTCCGTTCGATTTCCATGAAAATGAATGTGACGTCATTATTA
AGACAAAAGACAAAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTA
TCTAGTCCAATGTATTTCAATAACAACGTTAAGTATGTTTTCGATGTCGA
TGTTTGTGCAGAAAGTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGG
ATTGGACCAACAAAATTGACTgtTCGGAGTTGGATGATTTACTCTTAGTT
ACAAATACGCTTAAGCTAAAATCATTCAAATTACATTTAATCGATTATAT
GAAGACAGAATACGTATCAAAGTCAAAGCAATTTGATGAGAATTTACTGC
AAGTTTTTCATGCTGCTCGAAAGTATGAATTGACTACATTAATTGAAACA
ATTAGATCAAGGTCTCTGCGCATCTTAGATTTGGAACTTCTAGCCAACGT
ACATTATACCTCGCTGGAGAAAATATATCGATGTGAAATTTTAGAGACCT
CTGTATATGAACATGTCAATATCAAAAATGATCCGGAGTTGCTTGCAATA
TTTCACCTCTTCAAATTAATTATTCACAAATTTCAAATCCCCGACTTGGC
ttctaaaaaagatttcttaACCCACCGGATTCATGAGCACTTAATTGATT
TTGAGTCAATTTCCTACAAAAAGGGTTTTCCAAATTGTGTTGTCTTGGAC
GTTgagaacaaagaaattcatgTCAGTTCGTATTTACTCATAAACAACTC
TCCTGTATTCAAAGCAATGTTGAGTTCGACAAATTTCAAAGAAGGTCAAA
ACAGAAGGATTGAACTTCCTGGCAAGAAATTCAATGAAGTTGTCTACTTT
CTTCAATTTCTACACACACTTCAAGATATTAAAGATGACACTAATATTTG
GGCTCTGGCACCTTTGTGTCAAGAATATCAAGTGGATTGGCTGTCCAACA
AAATACAGTCCTTCATACGAAATTGTGCTAGAAACAGCACAAAGACAATT
CTCAACTATTTAGTGTTAGCTGAAGATATGCATTTTGGTATTGAAGTAGA
AAggagtttggtttctaaactcTCAAGAGGGTTCCAAGATATCAGTATGT
GCTTGGAATTTCTCCTACTCAGCCGTCGAATGCAAGTTTGGATTGCAAGA
AGAAAATTAGCTGATTCTTTGAAGAAGTTTCTGATTGATCCGCACGATGA
TACTCTTTCCAGGTATGGCAAGCAAACAACCCGAGAGAAAAAAGAGGCTG
GGATAAAGAAATATAAAGCAGTTGATGCTGACGTTGTTTCCATATTTCAT
GATCTAGATCAACCCAAAATCGAGCTTATAAATGCATAAATGGCCAGCAT
CAATGGTGACAACATCGTTCCGAACGAAGAACGAAATGAAAAATTGGTTC
CGTTCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGAC
AAAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAAT
GTATTTCAATAACAACGTTAAGTATGTTTTCGATGTCGATGTTTGTGCAG
AAAGTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAAC
AAAATTGACTgtTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCT
TAAGCTAAAATCATTCAAATTACATTTAATCGATTATATGAAGACAGAAT
ACGTATCAAAGTCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCAT
GCTGCTCGAAAGTATGAATTGACTACATTAATTGAAACAATTAGATCAAG
GTCTCTGCGCATCTTAGATTTGGAACTTCTAGCCAACGTACATTATACCT
CGCTGGAGAAAATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAA
CATGTCAATATCAAAAATGATCCGGAGTTGCTTGCAATATTTCACCTCTT
CAAATTAATTATTCACAAATTTCAAATCCCCGACTTGGCttctaaaaaag
atttcttaACCCACCGGATTCATGAGCACTTAATTGATTTTGAGTCAATT
TCCTACAAAAAGGGTTTTCCAAATTGTGTTGTCTTGGACGTTgagaacaa
agaaattcatgTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCA
AAGCAATGTTGAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATT
GAACTTCCTGGCAAGAAATTCAATGAAGTTGTCTACTTTCTTCAATTTCT
ACACACACTTCAAGATATTAAAGATGACACTAATATTTGGGCTCTGGCAC
CTTTGTGTCAAGAATATCAAGTGGATTGGCTGTCCAACAAAATACAGTCC
TTCATACGAAATTGTGCTAGAAACAGCACAAAGACAATTCTCAACTATTT
AGTGTTAGCTGAAGATATGCATTTTGGTATTGAAGTAGAAAggagtttgg
tttctaaactcTCAAGAGGGTTCCAAGATATCAGTATGTGCTTGGAATTT
CTCCTACTCAGCCGTCGAATGCAAGTTTGGATTGCAAGAAGAAAATTAGC
TGATTCTTTGAAGAAGTTTCTGATTGATCCGCACGATGATACTCTTTCCA
GGTATGGCAAGCAAACAACCCGAGAGAAAAAAGAGGCTGGGATAAAGAAA
TATAAAGCAGTTGATGCTGACGTTGTTTCCATATTTCATGATCTAGATCA
ACCCAAAATCGAGCTTATAAATGCATAAATGGCCAGCATCAATGGTGACA
ACATCGTTCCGAACGAAGAACGAAATGAAAAATTGGTTCCGTTCGATTTC
CATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACAAAGAAGTTCA
GTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATGTATTTCAATA
ACAACGTTAAGTATGTTTTCGATGTCGATGTTTGTGCAGAAAGTGTAACC
AAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACAAAATTGACTg
tTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTTAAGCTAAAAT
CATTCAAATTACATTTAATCGATTATATGAAGACAGAATACGTATCAAAG
TCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATGCTGCTCGAAA
GTATGAATTGACTACATTAATTGAAACAATTAGATCAAGGTCTCTGCGCA
TCTTAGATTTGGAACTTCTAGCCAACGTACATTATACCTCGCTGGAGAAA
ATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAACATGTCAATAT
CAAAAATGATCCGGAGTTGCTTGCAATATTTCACCTCTTCAAATTAATTA
TTCACAAATTTCAAATCCCCGACTTGGCttctaaaaaagatttcttaACC
CACCGGATTCATGAGCACTTAATTGATTTTGAGTCAATTTCCTACAAAAA
GGGTTTTCCAAATTGTGTTGTCTTGGACGTTgagaacaaagaaattcatg
TCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCAATGTTG
AGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCCTGG
CAAGAAATTCAATGAAGTTGTCTACTTTCTTCAATTTCTACACACACTTC
AAGATATTAAAGATGACACTAATATTTGGGCTCTGGCACCTTTGTGTCAA
GAATATCAAGTGGATTGGCTGTCCAACAAAATACAGTCCTTCATACGAAA
TTGTGCTAGAAACAGCACAAAGACAATTCTCAACTATTTAGTGTTAGCTG
AAGATATGCATTTTGGTATTGAAGTAGAAAggagtttggtttctaaactc
TCAAGAGGGTTCCAAGATATCAGTATGTGCTTGGAATTTCTCCTACTCAG
CCGTCGAATGCAAGTTTGGATTGCAAGAAGAAAATTAGCTGATTCTTTGA
AGAAGTTTCTGATTGATCCGCACGATGATACTCTTTCCAGGTATGGCAAG
CAAACAACCCGAGAGAAAAAAGAGGCTGGGATAAAGAAATATAAAGCAGT
TGATGCTGACGTTGTTTCCATATTTCATGATCTAGATCAACCCAAAATCG
AGCTTATAAATGCATAAATGGCCAGCATCAATGGTGACAACATCGTTCCG
AACGAAGAACGAAATGAAAAATTGGTTCCGTTCGATTTCCATGAAAATGA
ATGTGACGTCATTATTAAGACAAAAGACAAAGAAGTTCAGTTGCCATCCA
GTTTCTTAGAAATGGTATCTAGTCCAATGTATTTCAATAACAACGTTAAG
TATGTTTTCGATGTCGATGTTTGTGCAGAAAGTGTAACCAAAGCGTTGTC
ATTTTATCACCCTAAGGATTGGACCAACAAAATTGACTgtTCGGAGTTGG
ATGATTTACTCTTAGTTACAAATACGCTTAAGCTAAAATCATTCAAATTA
CATTTAATCGATTATATGAAGACAGAATACGTATCAAAGTCAAAGCAATT
TGATGAGAATTTACTGCAAGTTTTTCATGCTGCTCGAAAGTATGAATTGA
CTACATTAATTGAAACAATTAGATCAAGGTCTCTGCGCATCTTAGATTTG
GAACTTCTAGCCAACGTACATTATACCTCGCTGGAGAAAATATATCGATG
TGAAATTTTAGAGACCTCTGTATATGAACATGTCAATATCAAAAATGATC
CGGAGTTGCTTGCAATATTTCACCTCTTCAAATTAATTATTCACAAATTT
CAAATCCCCGACTTGGCttctaaaaaagatttcttaACCCACCGGATTCA
TGAGCACTTAATTGATTTTGAGTCAATTTCCTACAAAAAGGGTTTTCCAA
ATTGTGTTGTCTTGGACGTTgagaacaaagaaattcatgTCAGTTCGTAT
TTACTCATAAACAACTCTCCTGTATTCAAAGCAATGTTGAGTTCGACAAA
TTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCCTGGCAAGAAATTCA
ATGAAGTTGTCTACTTTCTTCAATTTCTACACACACTTCAAGATATTAAA
GATGACACTAATATTTGGGCTCTGGCACCTTTGTGTCAAGAATATCAAGT
GGATTGGCTGTCCAACAAAATACAGTCCTTCATACGAAATTGTGCTAGAA
ACAGCACAAAGACAATTCTCAACTATTTAGTGTTAGCTGAAGATATGCAT
TTTGGTATTGAAGTAGAAAggagtttggtttctaaactcTCAAGAGGGTT
CCAAGATATCAGTATGTGCTTGGAATTTCTCCTACTCAGCCGTCGAATGC
AAGTTTGGATTGCAAGAAGAAAATTAGCTGATTCTTTGAAGAAGTTTCTG
ATTGATCCGCACGATGATACTCTTTCCAGGTATGGCAAGCAAACAACCCG
AGAGAAAAAAGAGGCTGGGATAAAGAAATATAAAGCAGTTGATGCTGACG
TTGTTTCCATATTTCATGATCTAGATCAACCCAAAATCGAGCTTATAAAT
GCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033829XLOC_033829Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053614-exon-scaffold_233-1491911889:1447008..1447466TCONS_00053614-exon-scaffold_233-1491911889:1447008..1447466Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1510915933:1447008..1447466TCONS_00053614-exon-scaffold_233-1510915933:1447008..1447466Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1575043694:1447008..1447466TCONS_00053614-exon-scaffold_233-1575043694:1447008..1447466Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1491911889:1447771..1447845TCONS_00053614-exon-scaffold_233-1491911889:1447771..1447845Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1510915933:1447771..1447845TCONS_00053614-exon-scaffold_233-1510915933:1447771..1447845Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1575043694:1447771..1447845TCONS_00053614-exon-scaffold_233-1575043694:1447771..1447845Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1491911889:1448250..1448837TCONS_00053614-exon-scaffold_233-1491911889:1448250..1448837Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1510915933:1448250..1448837TCONS_00053614-exon-scaffold_233-1510915933:1448250..1448837Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1575043694:1448250..1448837TCONS_00053614-exon-scaffold_233-1575043694:1448250..1448837Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1491911889:1449016..1450231TCONS_00053614-exon-scaffold_233-1491911889:1449016..1450231Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1510915933:1449016..1450231TCONS_00053614-exon-scaffold_233-1510915933:1449016..1450231Clytia hemisphaericaexon
TCONS_00053614-exon-scaffold_233-1575043694:1449016..1450231TCONS_00053614-exon-scaffold_233-1575043694:1449016..1450231Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053614-proteinTCONS_00053614-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1447008..1450231 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.66683 2.28096 0.924721 2.45139 3.62558 2.40931 2.70755 3.01579 0.232317 0.913115 2.03621 0.916768 0.501349 0.403269 1.35677 1.69809 2.00489 1.08208 0.715588 0.636619 0.823867 1.21946 3.56662 1.83891 3.67353 2.95629 1.34377 0.768326 0.804401 1.12058
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053614 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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