TCONS_00053619 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053619
Unique NameTCONS_00053619
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2555

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053619 ID=TCONS_00053619|Name=TCONS_00053619|organism=Clytia hemisphaerica|type=transcript|length=2555bp
gttttttttctctttttctgtgTTATGTAGTAGAGATGAGAATCACTATG
TACTAATAATGTTGGGAGACGTGATGGATTGTTTTCGACCAAATGAATAG
ATTGGAGTCTCCCTACACTGAGAAGATTCAAGGATACATACATATGTGAC
AGAAAAAACATACATATATGATATGGGTTGAGGGgtaatcacttgaaaaa
aggaAAGGCCTGACGCTAAAAAGACATGAGaaatggcaaaaataaacatt
tgCAATACAAATTATGTAATACTCGCATCGTGGATACCAAAGGATGATCA
ATGTAGTTTAGAAGATCTGACCAACTTCATTGAAGATTCCCTTCAGATTC
CAAGCCAATACCAAGTGTTATNCGTCTACAAGATCTGACCAACTTCATTG
AAGATTCCCTTCAGATTCCAAGCCAATATCAAGTGTTATATAGCGAAGGA
ACTGTATTGAAGCATACAGCTCAAATAAGGAATATCGCAAGAGGAGATTA
CGATAAGGAACTTGTTTTAGCATATAAGTATTTCCCGACATGGGTCAAAG
GAACGCTTTCTAGTGAGGTCATTGGTGCGATCCAGAATTGCAATCTAGAA
GAATTGAGATCAGTGTCAGTGATCTACAAATACAAAAGCTTTAACAAAAC
GTTGATCGAAAACTTACTGGATGAACTCAAAAAACCTGAATGTTGGATGG
AAGAATTAAgacaaatcatttttcaaaagTATAGTTTATCATATCGCTGG
TTCGAATTACGACACCCACGCTACAAAAGACTGCACTTGAACGAAGAACA
TACGTCCGTCCTTTTAGAACAATTATTCTTGTCAGGTTATTATGTTCGAG
ATCAATTTAAAGAAGATGCGATTCTTGAGCTTTCGTTAGAAGACAAGGAG
AAAATGGATATGTATAGTTTGTTTCACTATCGATTGtttggtttgaaaaa
aattgttctgaaaTCGCTAACTAAAGTGATGGAGCTAGATGTTAagGTTT
GCCAATCATTTCCACGATTAAAGAAATCCATTGAGGAAGAATGGCTCATA
CCGGCACACCTTCAATTATATTTACACCATGGAAAAGAGATTCTGGAAGA
GAAATCTTTCCTGGATGTCTTTATAGAGGGCGCTACAGAGGCGGAACAAG
ATGACGGGATACCTACGGAAATCTCTATGCCCGAAACTTCATCGATCAAG
GACGTTGAAAAAACATTAACAGAAGAAATCTCTTTACCAATATCCTTATA
CACTTCATCCCAACCATACAATGAACTTTTATACATACGAAAAAGAATAT
TATTATACCAGCTTAAATCGTCAAATGAGGACGCTATNAACGAGAGAGAA
CATTATTATACCAGCTTAAACCGTTAAATGAGGACGCTATTGTAATGTAC
GCGTATCGAAAAATTCATTTAGCGATATACAGCTGTAAGAAGTGCAATAG
TGAACAGGTGCCATTAGTCGAGACGTCGTTCGCCTTACAAGGGCAATTAA
CAGTGAAGGATGTTGTTCACACGTTTATTAAGAATCAGAATGCCGAAGGG
CATTTATTATATTGCTGTGATAACACAAAAGAGTCACAGTATAAGCTTTC
AGACATGAACTCGAAAAGTATTGAACTGAGTACAAACCTTATTGATATAC
CGGGTGACTCCGTACTGANGAAAGTATCAAACTGAGTACGAACCTTATTG
ATATACCGGGTGATTCCGTACTGAGTTTCGAACCCGAACCAGTGAACGTT
GAAGATGTACAAGTGGGATCACCCATAAAATGTGTTTTGATTTGATATGG
ATTTTTTCAATATAGCTGGGTGTCCGACAAAGTACGAGCCTTGGATCACC
CGTACAATGTGTTTTGATGTGacatggatttttttttcaatatggcTGGG
TGTCCAACAAAGTACGAACGTTAAAGATAAACCGGGCGATTCCGTACCGA
GTTTACAACTCGAACCAGTGGGATCACCCGTACAACGTGTTTTGATGTGA
TATGGATTTCTAACAAAGGGTGTCTAACAAAGTACGAACGTTAAAGATAT
ACCGGTCGATTCCGTACCGAGTTTCCAACTCGAACCAGTGGGATCACCCG
TACAACGTGTTTTGATGTAATATGGATTTCTAGCAAAGGGTGTCCAACAA
AGTACGAACGTTAAAGATATACCGGGCGATTCCGTACCGAGTTTCCAACT
CGAACCAGTGGGATCACCCGTACAACGTGTTTTGATGTAATATGGATTTC
TAGCAAAGGGTGTCCAACAAAGTACGAACGTTAAAGATATACCGGGCGAT
TCCGTGCCGAGTTTTCAACTCGAACAAGTGGGATCACATGTTAAATATGT
TTTGATGTGAATTTTTAAATGGATTTCGTCTAGTTTTTGCTATATTTTGA
TTTGtcgtgattttttttatatattagcGGTAAAGTTACTATAGAGCCAC
ACCTTGATATTGATTAAACCTGAGATTTCGTACAATGTTATCAATTTATA
CCAGTATGGTCTCTCATTAGTTTTCAAATTGATACTTCATTTAACTATAT
CTTTC
Run BLAST on NCBI

transcript from alignment at scaffold_233:38875..52494-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053619 ID=TCONS_00053619|Name=TCONS_00053619|organism=Clytia hemisphaerica|type=transcript|length=13620bp|location=Sequence derived from alignment at scaffold_233:38875..52494- (Clytia hemisphaerica)
GTTTTTTTTCTCTTTTTCTGTGTTATGTAGTAGAGATGAGAATCACTATG
TACTAATAATGTTGGGAGACGTGATGGATTGTTTTCGACCAAATGAATAG
ATTGGAGTCTCCCTACACTGAGAAGATTCAAGGATACATACATATGTGAC
AGAAAAAACATACATATATGATATGGGTTGAGGGGTAATCACTTGAAAAA
AGGAGTACGATACTTTTTGACTTTTTTTATTACTTTTATTTGACTTTTTT
ACTTTTTTTTGACTTTTTCAAACTTTCATTTTGACTTTTTCTCGACAAAA
ACGCCCACCGCCCTCGGGCGCCCAAAATTTTCAACCCAAATCTTTCCAAA
AACACCCACCGCCCGTAAATTTTGCTTCACCCATACAGGAGATTCACACC
TTGTAAATTAATTACACTTGATAATTATAGGTAATCAGAAGGTCTATTAG
TACAAATAGTGGGGAAAACATCTCCACATTGCCCGATGATGGGAGAAGAA
TGTCTCGAAACGTAGCCAAACGTAAATCTCGTGATCGAAGCCACGATAGA
CTTCCAATATGAATATCACTGGGCCGATAAACGCAAACTTATTTAGATTT
TGACTTTTTCTTTGACTTTATTGATTTTTTGTATTGGTGTACGAAATTTT
TTCAACCCCTCGATATGAGTGGTCAGGGAAAATTCTAGAAAGACAGGAAA
GTGTCCGTTGGTGGACCAACTGTTTTTTTTTTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGGCCGCAGACTTTC
GTTTCGTTTCGTTGATACATTAGTATTCAGGGTTTACTTCATACTGTTCA
TACATAAAAGTTATCTTTAAAGTTATCAAAAATAGCAACAAAAACACTTT
CTTTCTATTTTTCGCCTTATTAAAAGGGAACAGAAACTTCTGACTTCGGG
TAAAAGATTTAGTTGCGGATAAAGAATTCAAGAAAAAGCTTTGTCAGATG
ATAAAATGTCGGAGAATTTTTGCAATTGAAAAAAAATTGTCGAATTCCAC
TTGGAAGCAGATCCTTTTAGCTCTATGGAAACAGTTTTTTCTTAAATTTA
TCAACAAATTTTTTCCAAATATTTCCTACAATTGTCAAATCGAATTTAGG
TCGAAATCTATTTTTCCAAATTAATTAGTGAATTTTAGTTTAATGTTAAA
AAGCTTTTTCGGCCATCCTATAATTTGTCTCCCTGCCATAATGTATTCGT
AAAAGCTTTCTTTCGTATTCGTAACAGTATATAATTTTCTCTTTCGCGTT
TTCCAGGAATACCTACGGAAATTTCTATGCCCGAAACTTCATCGATCAAG
GACGTCGAAAAAAAATTAACGGAAGAAATCGTTTTACCAATATCCTTATA
CTCNAAGGACGTCGAAAAAAAATTAACGGAAGAAATCGTTTTACCAATAT
CCTTATACTCTTCAGCCCAACCATGCGATGAACTTTTATACAAACCAGGG
AGATTATTATACCAACTTAAACCGTTAAATGAGGACTCTATTGTAATGTA
CGCATATCGAACAATTCATTTAGCGATATACAGCTGCAAGAAGTGCAATA
ATGAACAGGTGCCATTAGTCGAGACGTTGTTCGCCATAAGAGGGCAATTC
ACAAAAGTGAAGGATGTTGTTCACACAATTAATAATAATTATCAGAATGA
AGAAGGACTATTATTATATTGCTGTAATAACACAAAAGAGTCACAGTATA
AAACAAATGCCCTGTCAAAGTATTTCAGTATTTCAGACATGAATTCGAAA
AGTGTCAAACTGAGTACGAACCTTATTGATATACCGGGTGATTCCGTACT
GAGTTTCGAACTCGAACCAGTGAAAAAATGTGTTTTGATGTGATATGGAT
TTTTTTCAATGTGGCTGAGTGTCCAACAAAATACTAACATTAAAGATATA
TCGGGTGATTTCCGTGCCGAGTTTCCAACTCGAACAAGTTGGATCACCCT
TTAAATGTGTTTTGATGTGACATGGATTTTTTCAATGTGGCTGGGTGTCC
AACAAAGTACGAACGTTAAAGATATACCGAGTAATTCCGTGCCGAGTCTC
CAACTCGAACCAGATGTGATATGGATTTTTTCCAATATGGCTGGGTGTCC
AACTAAGTACGAACGTTTAAGACATACCGAGTAATTCCGTGCCGAGTTTC
CGACTCGAACAATTGGGATCACATGTTAAATGTGTTTTGATGTGATATGG
ATTTTTTTTCAATATGGCTGGATGTCCAACAAAGTACGAACGTTAAAGAT
ATACCGGGCGATTCGGTGCCGAGTTTCCAACTCGACAAGTGGGATCACAT
GTTAAATGGGTTTTGATGTGAATTTTTAAATGTCTTTCATCTAGTTTTCG
CTATTATTTTAATTTGTCGTGAATTTTTTGATATATTAGCGGTAAAAGTA
ACTATAGCCACGCCTTGCTATTGATTAAACCTGAGATTCCGCACAATGTT
ATCAATTTATACCGGTATGGTCTCTCATTAGTTTTCAAATTGATACTTAA
TTTAACGATATCTTTCGATCATTAGAAATATATGGCTTTAACCTTTGTAT
TAGTGAATCACAATCTCGGTCAAAATCTATTGAGAATTTTGGTTAATTCC
TCGTTTTTAGCTTCAACTTTTTTTTGTTCGCGCGAAACTTTTTTATGACG
TAATCTTTTCTCCAGGCAAAAAAGGATAAGCAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGTGGTCATTGAAAA
TTCTAGAAAGACAGGAAAGTGTCCGTTGGTGGACCAACTGTTTTTTTTTC
AACTGCGGTTTTTCTTTAAAGAGGGTTTTTCTTCATTATTTTTTTATAAT
TTAAGAAGGCCTGACGCTAAAAAGACATGAGAAATGGCAAAAATAAACAT
TTGCAATACAAATTATGTAATACTCGCATCGTGGATACCAAAGGATGATC
AATGTAGTTTAGAAGATCTGACCAACTTCATTGAAGATTCCCTTCAGATT
CCAAGCCAATACCAAGTGTTATNCGTCTACAAGATCTGACCAACTTCATT
GAAGATTCCCTTCAGATTCCAAGCCAATATCAAGTGTTATATAGCGAAGG
AACTGTATTGAAGCATACAGCTCAAATAAGGAATATCGCAAGAGGAGATT
ACGATAAGGAACTTGTTTTAGCATATAAGTATTTCCCGACATGGGTCAAA
GGTGAGCTTATGGATTATATGGATTATTATCGATCGTTTATGGATTTTCG
CAAGCGAAAGTAAAAGTAATTGAAAATTCTTCGAAAATTTATGCTCGCAA
AAGTTTATGCTCGCAAAAGTTTATGCTCGCAAAAGTTTATGCTCGCGAAA
GTTTATGCTTGCAAAAGTTTATGCTCGCGAAAAAATCTCAAAAAAAATTG
GAAAATCTATAAAACCTCGAAATCCTAATAAATATCAAATTTTTGGCACA
TCAGTTTCCTTTAATGTCCTTTTAAAATCGAAGAGCAACCGTCTTTAGCG
GATTTAAGGACTATTTTTCACTTTTAAGGCAATTGTCATTGTTGCAATTT
AAAAGAATTAATCAGTGTTGATATTCTTTTCTTTAAGGAACGCTTTCTAG
TGAGGTCATTGGTGCGATCCAGAATTGCAATCTAGAAGAATTGAGATCAG
TGTCAGTGATCTACAAATACAAAAGCTTTAACAAAACGTTGATCGAAAAC
TTACTGGATGAACTCAAAAAACCTGAATGTTGGATGGAAGAATTAAGACA
AATCATTTTTCAAAAGGTTGGATAGTTTTATATCTTTTTCCTATTCAAAT
TTTTACTCAAAATATTACCAAATTTTTCATGTTTACTTCGAGTTTTGAAA
CCACCCCTGTCTCACAGTCCCGGTGGAATGAGTGGAACTCTCTACCGCAG
TGGATGAACATTTCTATCGAAATCCTTTCCCAGCTGACACACAACGTTAT
TGGCCCAGCGCTAAGCGTAGGCCTTTCATTTGCAATTTTCTGTCTGTCCG
TCCGTGTGTCACTTTAGGCAGAAACGGCGCTTAAAACCAGTACCACACAT
TTTAATTTTGCCGTCTAGAGAGGGAAAAGCTTGCTAAAGTCGGATACTGG
CTATAAAAGATATATTTTCTGATTCCGCGCTCCTCCAAAACAATTTTCAA
AACAAAACAAGATGGCGGTCGAAGCGAGGAGGTTAATTCATACTTTCTTG
AACATTTTCTTTGCTTTAGTGGTCAAGAGACTTTCAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCGTCAGCTGGGCCTTCACGCCGCTACGGCTTCTTGTTTCAACGT
TAATCTAACGTTCAAAACGTCCATATAACGTTAAATTAACATTAAATTAA
CAAGCGGGGGGAGGGGTTCATGAGTCATGACCTCAAGAGATTTTCATTTT
GTATTCCAGTATAGTTTATCATATCGCTGGTTCGAATTACGACACCCACG
CTACAAAAGACTGCACTTGAACGAAGAACATACGTCCGTCCTTTTAGAAC
AATTATTCTTGTCAGGTTATTATGTTCGAGATCAATTTAAAGAAGATGCG
ATTCTTGAGCTTTCGTTAGAAGACAAGGAGAAAATGGATATGTATAGTTT
GTTTCACTATCGATTGTTTGGTTTGAAAAAAATTGTTCTGAAATCGCTAA
CTAAAGTGATGGAGCTAGATGTTAAGGTGAGTGTTTTTTTTTAAACGGGT
TGAATACATAGCTGTCGATTCCTTCCTCCAAATTTCCACATTATTTTCGC
ATTTCCGAGAGGTGTGATGAAAGAATCAGGGTTTTTTAAAAAAATTTGGG
ACGAAAATTTGTAACGAAAAATTTCACTATTTCACCAAAAAAATGTATTA
ATTAATCCGGTTTATTACTCCCGTAACATTTATCAAATTTTTTTTCTTCC
ACTTCCCTGCAACATACCCAGCAAGCACAAAACGTTGTTTTAACGTCCAA
ATAACGTTATTTGGACGTTATGAATGTCAAATGGACGTTGATACGACGTC
GAGTGCCGACTGGGTATGCTAATGAAACAATCCATAGTAAAAAGGTAACC
AGTTGGCACACAACGTTGTTTCAACGTTCATCTAATGTTCACAACGTCCA
TATAACGTTAGATGAACGTTGAAGCAACGTTGTTTGCCATCTGGGAAAGC
ATGCGGTGCGAAATGTTATGGGTTCAATCCCCGCTCAGGTCCAAAAGTAC
AAAAATGGTACTTGATGTCTCTCTACTTGACGCTCATTAATTAAAGAGAA
GAATCGAGGGTAAGTGAAGCAATCCAGGGAGAAAGGGTGGCAGCCTCCCC
TACCTTTGGGTAGACAGCTATCGAACGAGGAGCCGTTCCAGCGGCCGAAG
ACCTTGACAAACAGCCGAAGACATGCTTAGACTGTTGAGAATCTAAATGT
AGCATAGCAGATCTTCAGTTTTTAAAAATCAAATTATTCAAACTGTATTG
GTTATCATACTGTTGAAGTTAAATATTTTTTTGAGTTGAAAAAAGCGCGA
CTGTTTTCGCAGCGTCCTACTCAGAGTCTGATTCTTAAGACTTTATTACG
TTTCCCAGCTGGCACACAACGTTGTTTCAACGTTTTTCTAACATTCACAA
CGTCCATATAACGTTAGATAAACGTTGAAACAACGTTGTGTGCCANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCTGGCACACAACGTT
GTTTCAACGTTTTTCTAACATTCACAACGTCCATATAACGTTAGATAAAC
GTTGAAACAACGTTGTGGGCCAGCTGGGTTAACTATTCGTTTTCTAAACT
AGGTTTGCCAATCATTTCCACGATTAAAGAAATCCATTGAGGAAGAATGG
CTCATACCGGCACACCTTCAATTATATTTACACCATGGAAAAGAGATTCT
GGAAGAGAAATCTTTCCTGGATGTCTTTATAGAGGGCGCTACAGAGGCGG
AACAAGATGACGGCAAGTTGGAACTCAATTTGATATCAAAAACTCCTCAA
AATTTGACTGTAATACTGGTGCTACCAGAATATATGCAAGACGTAGGTCA
GTAGGAATCATTTTCAATAAAAAGCTTGATCTTAGGCAAAAATAAAGAAA
TGTAGCGTTTCCGGAAACCGGCCGGGTGAAAAATTTTTTCTCACCCGGCC
GCAGACTTTCGTTTCATTTCGTTGATACATTAGTATTCAGGGTTTACTTC
ATACTGTTCATACATAAAAGTTATCTTTAAAGTTATCAAAAATAGCAACA
AAAACACTTTCTTTCTATTTTTCGCCTTATTAAAAGGGAACAGAAACTTC
TGACTTCGGGTAAAAGATTTAGTTGCGGATAAAGAATTCAAGAAAAAGCT
TTGTCAGATGATAAAATGTCGGAGAATTTTTGCAATTGAAAAAAAATTGT
CGAATTCCACTTGGAAGCAGATCCTTTTAGCTCTATAGAAACAGTTTTTT
CTTAAATTTATCAACAAATTTTTTCCAAATATTTCCTACAATTGTCAAAT
CGAATTTAGGTCGAAATCTATTTTTCCAAATTAATTAGTGAATTTCAATT
TAATGTTAAAAAGCTTTTTCGGCCATCCAATAATTTGTATCCCCCGCCCG
CCAAAATGTATTCTTAAAAGCTTTTTTTCGTATGCGTAACAATATATAAT
TTTCTCTTTCGCCTTTTCCAGGGATACCTACGGAAATCTCTATGCCCGAA
ACTTCATCGATCAAGGACGTTGAAAAAACATTAACAGAAGAAATCTCTTT
ACCAATATCCTTATACACTTCATCCCAACCATACAATGAACTTTTATACA
TACGAAAAAGAATATTATTATACCAGCTTAAATCGTCAAATGAGGACGCT
ATNAACGAGAGAGAACATTATTATACCAGCTTAAACCGTTAAATGAGGAC
GCTATTGTAATGTACGCGTATCGAAAAATTCATTTAGCGATATACAGCTG
TAAGAAGTGCAATAGTGAACAGGTGCCATTAGTCGAGACGTCGTTCGCCT
TACAAGGGCAATTAACAGTGAAGGATGTTGTTCACACGTTTATTAAGAAT
CAGAATGCCGAAGGGCATTTATTATATTGCTGTGATAACACAAAAGAGTC
ACAGTATAAGCTTTCAGACATGAACTCGAAAAGTATTGAACTGAGTACAA
ACCTTATTGATATACCGGGTGACTCCGTACTGANGAAAGTATCAAACTGA
GTACGAACCTTATTGATATACCGGGTGATTCCGTACTGAGTTTCGAACCC
GAACCAGTGAACGTTGAAGATGTACAAGTGGGATCACCCATAAAATGTGT
TTTGATTTGATATGGATTTTTTCAATATAGCTGGGTGTCCGACAAAGTAC
GAGCCTTGGATCACCCGTACAATGTGTTTTGATGTGACATGGATTTTTTT
TTCAATATGGCTGGGTGTCCAACAAAGTACGAACGTTAAAGATAAACCGG
GCGATTCCGTACCGAGTTTACAACTCGAACCAGTGGGATCACCCGTACAA
CGTGTTTTGATGTGATATGGATTTCTAACAAAGGGTGTCTAACAAAGTAC
GAACGTTAAAGATATACCGGTCGATTCCGTACCGAGTTTCCAACTCGAAC
CAGTGGGATCACCCGTACAACGTGTTTTGATGTAATATGGATTTCTAGCA
AAGGGTGTCCAACAAAGTACGAACGTTAAAGATATACCGGGCGATTCCGT
ACCGAGTTTCCAACTCGAACCAGTGGGATCACCCGTACAACGTGTTTTGA
TGTAATATGGATTTCTAGCAAAGGGTGTCCAACAAAGTACGAACGTTAAA
GATATACCGGGCGATTCCGTGCCGAGTTTTCAACTCGAACAAGTGGGATC
ACATGTTAAATATGTTTTGATGTGAATTTTTAAATGGATTTCGTCTAGTT
TTTGCTATATTTTGATTTGTCGTGATTTTTTTTATATATTAGCGGTAAAG
TTACTATAGAGCCACACCTTGATATTGATTAAACCTGAGATTTCGTACAA
TGTTATCAATTTATACCAGTATGGTCTCTCATTAGTTTTCAAATTGATAC
TTCATTTAACTATATCTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033832XLOC_033832Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053619-exon-scaffold_233-1575043694:52291..52494TCONS_00053619-exon-scaffold_233-1575043694:52291..52494Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1575043694:45694..46039TCONS_00053619-exon-scaffold_233-1575043694:45694..46039Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1575043694:45129..45307TCONS_00053619-exon-scaffold_233-1575043694:45129..45307Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1575043694:42269..42535TCONS_00053619-exon-scaffold_233-1575043694:42269..42535Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1575043694:40983..41142TCONS_00053619-exon-scaffold_233-1575043694:40983..41142Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1575043694:38875..40273TCONS_00053619-exon-scaffold_233-1575043694:38875..40273Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1510915933:52291..52494TCONS_00053619-exon-scaffold_233-1510915933:52291..52494Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1510915933:45694..46039TCONS_00053619-exon-scaffold_233-1510915933:45694..46039Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1510915933:45129..45307TCONS_00053619-exon-scaffold_233-1510915933:45129..45307Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1510915933:42269..42535TCONS_00053619-exon-scaffold_233-1510915933:42269..42535Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1510915933:40983..41142TCONS_00053619-exon-scaffold_233-1510915933:40983..41142Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1510915933:38875..40273TCONS_00053619-exon-scaffold_233-1510915933:38875..40273Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1491911889:52291..52494TCONS_00053619-exon-scaffold_233-1491911889:52291..52494Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1491911889:45694..46039TCONS_00053619-exon-scaffold_233-1491911889:45694..46039Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1491911889:45129..45307TCONS_00053619-exon-scaffold_233-1491911889:45129..45307Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1491911889:42269..42535TCONS_00053619-exon-scaffold_233-1491911889:42269..42535Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1491911889:40983..41142TCONS_00053619-exon-scaffold_233-1491911889:40983..41142Clytia hemisphaericaexon
TCONS_00053619-exon-scaffold_233-1491911889:38875..40273TCONS_00053619-exon-scaffold_233-1491911889:38875..40273Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:38875..52494 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.00555486	0	0	0.465911	0.0402156	0.60124	0.667331	0.535793	0.912402	0.174073	0.907107	1.99087	1.88495	1.83282	0.0322979	0.845314	0.815806	2.59694	2.61785	0.795706	0.71997	0.533749	7.24199e-07	2.50937e-06	0.626712	0.00898004	0.485407	2.87576	2.21395
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053619 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top