TCONS_00053620 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053620
Unique NameTCONS_00053620
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2550

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053620 ID=TCONS_00053620|Name=TCONS_00053620|organism=Clytia hemisphaerica|type=transcript|length=2550bp
gttttttttctctttttctgtgTTATGTAGTAGAGATGAGAATCACTATG
TACTAATAATGTTGGGAGACGTGATGGATTGTTTTCGACCAAATGAATAG
ATTGGAGTCTCCCTACACTGAGAAGATTCAAGGATACATACATATGTGAC
AGAAAAAACATACATATATGATATGGGTTGAGGGgtaatcacttgaaaaa
aggaAAGGCCTGACGCTAAAAAGACATGAGaaatggcaaaaataaacatt
tgCAATACAAATTATGTAATACTCGCATCGTGGATACCAAAGGATGATCA
ATGTAGTTTAGAAGATCTGACCAACTTCATTGAAGATTCCCTTCAGATTC
CAAGCCAATACCAAGTGTTATNCGTCTACAAGATCTGACCAACTTCATTG
AAGATTCCCTTCAGATTCCAAGCCAATATCAAGTGTTATATAGCGAAGGA
ACTGTATTGAAGCATACAGCTCAAATAAGGAATATCGCAAGAGGAGATTA
CGATAAGGAACTTGTTTTAGCATATAAGTATTTCCCGACATGGGTCAAAG
GAACGCTTTCTAGTGAGGTCATTGGTGCGATCCAGAATTGCAATCTAGAA
GAATTGAGATCAGTGTCAGTGATCTACAAATACAAAAGCTTTAACAAAAC
GTTGATCGAAAACTTACTGGATGAACTCAAAAAACCTGAATGTTGGATGG
AAGAATTAAgacaaatcatttttcaaaagTTTATCATATCGCTGGTTCGA
ATTACGACACCCACGCTACAAAAGACTGCACTTGAACGAAGAACATACGT
CCGTCCTTTTAGAACAATTATTCTTGTCAGGTTATTATGTTCGAGATCAA
TTTAAAGAAGATGCGATTCTTGAGCTTTCGTTAGAAGACAAGGAGAAAAT
GGATATGTATAGTTTGTTTCACTATCGATTGtttggtttgaaaaaaattg
ttctgaaaTCGCTAACTAAAGTGATGGAGCTAGATGTTAagGTTTGCCAA
TCATTTCCACGATTAAAGAAATCCATTGAGGAAGAATGGCTCATACCGGC
ACACCTTCAATTATATTTACACCATGGAAAAGAGATTCTGGAAGAGAAAT
CTTTCCTGGATGTCTTTATAGAGGGCGCTACAGAGGCGGAACAAGATGAC
GGGATACCTACGGAAATCTCTATGCCCGAAACTTCATCGATCAAGGACGT
TGAAAAAACATTAACAGAAGAAATCTCTTTACCAATATCCTTATACACTT
CATCCCAACCATACAATGAACTTTTATACATACGAAAAAGAATATTATTA
TACCAGCTTAAATCGTCAAATGAGGACGCTATNAACGAGAGAGAACATTA
TTATACCAGCTTAAACCGTTAAATGAGGACGCTATTGTAATGTACGCGTA
TCGAAAAATTCATTTAGCGATATACAGCTGTAAGAAGTGCAATAGTGAAC
AGGTGCCATTAGTCGAGACGTCGTTCGCCTTACAAGGGCAATTAACAGTG
AAGGATGTTGTTCACACGTTTATTAAGAATCAGAATGCCGAAGGGCATTT
ATTATATTGCTGTGATAACACAAAAGAGTCACAGTATAAGCTTTCAGACA
TGAACTCGAAAAGTATTGAACTGAGTACAAACCTTATTGATATACCGGGT
GACTCCGTACTGANGAAAGTATCAAACTGAGTACGAACCTTATTGATATA
CCGGGTGATTCCGTACTGAGTTTCGAACCCGAACCAGTGAACGTTGAAGA
TGTACAAGTGGGATCACCCATAAAATGTGTTTTGATTTGATATGGATTTT
TTCAATATAGCTGGGTGTCCGACAAAGTACGAGCCTTGGATCACCCGTAC
AATGTGTTTTGATGTGacatggatttttttttcaatatggcTGGGTGTCC
AACAAAGTACGAACGTTAAAGATAAACCGGGCGATTCCGTACCGAGTTTA
CAACTCGAACCAGTGGGATCACCCGTACAACGTGTTTTGATGTGATATGG
ATTTCTAACAAAGGGTGTCTAACAAAGTACGAACGTTAAAGATATACCGG
TCGATTCCGTACCGAGTTTCCAACTCGAACCAGTGGGATCACCCGTACAA
CGTGTTTTGATGTAATATGGATTTCTAGCAAAGGGTGTCCAACAAAGTAC
GAACGTTAAAGATATACCGGGCGATTCCGTACCGAGTTTCCAACTCGAAC
CAGTGGGATCACCCGTACAACGTGTTTTGATGTAATATGGATTTCTAGCA
AAGGGTGTCCAACAAAGTACGAACGTTAAAGATATACCGGGCGATTCCGT
GCCGAGTTTTCAACTCGAACAAGTGGGATCACATGTTAAATATGTTTTGA
TGTGAATTTTTAAATGGATTTCGTCTAGTTTTTGCTATATTTTGATTTGt
cgtgattttttttatatattagcGGTAAAGTTACTATAGAGCCACACCTT
GATATTGATTAAACCTGAGATTTCGTACAATGTTATCAATTTATACCAGT
ATGGTCTCTCATTAGTTTTCAAATTGATACTTCATTTAACTATATCTTTC
Run BLAST on NCBI

transcript from alignment at scaffold_233:38875..52494-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053620 ID=TCONS_00053620|Name=TCONS_00053620|organism=Clytia hemisphaerica|type=transcript|length=13620bp|location=Sequence derived from alignment at scaffold_233:38875..52494- (Clytia hemisphaerica)
GTTTTTTTTCTCTTTTTCTGTGTTATGTAGTAGAGATGAGAATCACTATG TACTAATAATGTTGGGAGACGTGATGGATTGTTTTCGACCAAATGAATAG ATTGGAGTCTCCCTACACTGAGAAGATTCAAGGATACATACATATGTGAC AGAAAAAACATACATATATGATATGGGTTGAGGGGTAATCACTTGAAAAA AGGAGTACGATACTTTTTGACTTTTTTTATTACTTTTATTTGACTTTTTT ACTTTTTTTTGACTTTTTCAAACTTTCATTTTGACTTTTTCTCGACAAAA ACGCCCACCGCCCTCGGGCGCCCAAAATTTTCAACCCAAATCTTTCCAAA AACACCCACCGCCCGTAAATTTTGCTTCACCCATACAGGAGATTCACACC TTGTAAATTAATTACACTTGATAATTATAGGTAATCAGAAGGTCTATTAG TACAAATAGTGGGGAAAACATCTCCACATTGCCCGATGATGGGAGAAGAA TGTCTCGAAACGTAGCCAAACGTAAATCTCGTGATCGAAGCCACGATAGA CTTCCAATATGAATATCACTGGGCCGATAAACGCAAACTTATTTAGATTT TGACTTTTTCTTTGACTTTATTGATTTTTTGTATTGGTGTACGAAATTTT TTCAACCCCTCGATATGAGTGGTCAGGGAAAATTCTAGAAAGACAGGAAA GTGTCCGTTGGTGGACCAACTGTTTTTTTTTTTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGGCCGCAGACTTTC GTTTCGTTTCGTTGATACATTAGTATTCAGGGTTTACTTCATACTGTTCA TACATAAAAGTTATCTTTAAAGTTATCAAAAATAGCAACAAAAACACTTT CTTTCTATTTTTCGCCTTATTAAAAGGGAACAGAAACTTCTGACTTCGGG TAAAAGATTTAGTTGCGGATAAAGAATTCAAGAAAAAGCTTTGTCAGATG ATAAAATGTCGGAGAATTTTTGCAATTGAAAAAAAATTGTCGAATTCCAC TTGGAAGCAGATCCTTTTAGCTCTATGGAAACAGTTTTTTCTTAAATTTA TCAACAAATTTTTTCCAAATATTTCCTACAATTGTCAAATCGAATTTAGG TCGAAATCTATTTTTCCAAATTAATTAGTGAATTTTAGTTTAATGTTAAA AAGCTTTTTCGGCCATCCTATAATTTGTCTCCCTGCCATAATGTATTCGT AAAAGCTTTCTTTCGTATTCGTAACAGTATATAATTTTCTCTTTCGCGTT TTCCAGGAATACCTACGGAAATTTCTATGCCCGAAACTTCATCGATCAAG GACGTCGAAAAAAAATTAACGGAAGAAATCGTTTTACCAATATCCTTATA CTCNAAGGACGTCGAAAAAAAATTAACGGAAGAAATCGTTTTACCAATAT CCTTATACTCTTCAGCCCAACCATGCGATGAACTTTTATACAAACCAGGG AGATTATTATACCAACTTAAACCGTTAAATGAGGACTCTATTGTAATGTA CGCATATCGAACAATTCATTTAGCGATATACAGCTGCAAGAAGTGCAATA ATGAACAGGTGCCATTAGTCGAGACGTTGTTCGCCATAAGAGGGCAATTC ACAAAAGTGAAGGATGTTGTTCACACAATTAATAATAATTATCAGAATGA AGAAGGACTATTATTATATTGCTGTAATAACACAAAAGAGTCACAGTATA AAACAAATGCCCTGTCAAAGTATTTCAGTATTTCAGACATGAATTCGAAA AGTGTCAAACTGAGTACGAACCTTATTGATATACCGGGTGATTCCGTACT GAGTTTCGAACTCGAACCAGTGAAAAAATGTGTTTTGATGTGATATGGAT TTTTTTCAATGTGGCTGAGTGTCCAACAAAATACTAACATTAAAGATATA TCGGGTGATTTCCGTGCCGAGTTTCCAACTCGAACAAGTTGGATCACCCT TTAAATGTGTTTTGATGTGACATGGATTTTTTCAATGTGGCTGGGTGTCC AACAAAGTACGAACGTTAAAGATATACCGAGTAATTCCGTGCCGAGTCTC CAACTCGAACCAGATGTGATATGGATTTTTTCCAATATGGCTGGGTGTCC AACTAAGTACGAACGTTTAAGACATACCGAGTAATTCCGTGCCGAGTTTC CGACTCGAACAATTGGGATCACATGTTAAATGTGTTTTGATGTGATATGG ATTTTTTTTCAATATGGCTGGATGTCCAACAAAGTACGAACGTTAAAGAT ATACCGGGCGATTCGGTGCCGAGTTTCCAACTCGACAAGTGGGATCACAT GTTAAATGGGTTTTGATGTGAATTTTTAAATGTCTTTCATCTAGTTTTCG CTATTATTTTAATTTGTCGTGAATTTTTTGATATATTAGCGGTAAAAGTA ACTATAGCCACGCCTTGCTATTGATTAAACCTGAGATTCCGCACAATGTT ATCAATTTATACCGGTATGGTCTCTCATTAGTTTTCAAATTGATACTTAA TTTAACGATATCTTTCGATCATTAGAAATATATGGCTTTAACCTTTGTAT TAGTGAATCACAATCTCGGTCAAAATCTATTGAGAATTTTGGTTAATTCC TCGTTTTTAGCTTCAACTTTTTTTTGTTCGCGCGAAACTTTTTTATGACG TAATCTTTTCTCCAGGCAAAAAAGGATAAGCAANNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGTGGTCATTGAAAA TTCTAGAAAGACAGGAAAGTGTCCGTTGGTGGACCAACTGTTTTTTTTTC AACTGCGGTTTTTCTTTAAAGAGGGTTTTTCTTCATTATTTTTTTATAAT TTAAGAAGGCCTGACGCTAAAAAGACATGAGAAATGGCAAAAATAAACAT TTGCAATACAAATTATGTAATACTCGCATCGTGGATACCAAAGGATGATC AATGTAGTTTAGAAGATCTGACCAACTTCATTGAAGATTCCCTTCAGATT CCAAGCCAATACCAAGTGTTATNCGTCTACAAGATCTGACCAACTTCATT GAAGATTCCCTTCAGATTCCAAGCCAATATCAAGTGTTATATAGCGAAGG AACTGTATTGAAGCATACAGCTCAAATAAGGAATATCGCAAGAGGAGATT ACGATAAGGAACTTGTTTTAGCATATAAGTATTTCCCGACATGGGTCAAA GGTGAGCTTATGGATTATATGGATTATTATCGATCGTTTATGGATTTTCG CAAGCGAAAGTAAAAGTAATTGAAAATTCTTCGAAAATTTATGCTCGCAA AAGTTTATGCTCGCAAAAGTTTATGCTCGCAAAAGTTTATGCTCGCGAAA GTTTATGCTTGCAAAAGTTTATGCTCGCGAAAAAATCTCAAAAAAAATTG GAAAATCTATAAAACCTCGAAATCCTAATAAATATCAAATTTTTGGCACA TCAGTTTCCTTTAATGTCCTTTTAAAATCGAAGAGCAACCGTCTTTAGCG GATTTAAGGACTATTTTTCACTTTTAAGGCAATTGTCATTGTTGCAATTT AAAAGAATTAATCAGTGTTGATATTCTTTTCTTTAAGGAACGCTTTCTAG TGAGGTCATTGGTGCGATCCAGAATTGCAATCTAGAAGAATTGAGATCAG TGTCAGTGATCTACAAATACAAAAGCTTTAACAAAACGTTGATCGAAAAC TTACTGGATGAACTCAAAAAACCTGAATGTTGGATGGAAGAATTAAGACA AATCATTTTTCAAAAGGTTGGATAGTTTTATATCTTTTTCCTATTCAAAT TTTTACTCAAAATATTACCAAATTTTTCATGTTTACTTCGAGTTTTGAAA CCACCCCTGTCTCACAGTCCCGGTGGAATGAGTGGAACTCTCTACCGCAG TGGATGAACATTTCTATCGAAATCCTTTCCCAGCTGACACACAACGTTAT TGGCCCAGCGCTAAGCGTAGGCCTTTCATTTGCAATTTTCTGTCTGTCCG TCCGTGTGTCACTTTAGGCAGAAACGGCGCTTAAAACCAGTACCACACAT TTTAATTTTGCCGTCTAGAGAGGGAAAAGCTTGCTAAAGTCGGATACTGG CTATAAAAGATATATTTTCTGATTCCGCGCTCCTCCAAAACAATTTTCAA AACAAAACAAGATGGCGGTCGAAGCGAGGAGGTTAATTCATACTTTCTTG AACATTTTCTTTGCTTTAGTGGTCAAGAGACTTTCAAANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNCGTCAGCTGGGCCTTCACGCCGCTACGGCTTCTTGTTTCAACGT TAATCTAACGTTCAAAACGTCCATATAACGTTAAATTAACATTAAATTAA CAAGCGGGGGGAGGGGTTCATGAGTCATGACCTCAAGAGATTTTCATTTT GTATTCCAGTATAGTTTATCATATCGCTGGTTCGAATTACGACACCCACG CTACAAAAGACTGCACTTGAACGAAGAACATACGTCCGTCCTTTTAGAAC AATTATTCTTGTCAGGTTATTATGTTCGAGATCAATTTAAAGAAGATGCG ATTCTTGAGCTTTCGTTAGAAGACAAGGAGAAAATGGATATGTATAGTTT GTTTCACTATCGATTGTTTGGTTTGAAAAAAATTGTTCTGAAATCGCTAA CTAAAGTGATGGAGCTAGATGTTAAGGTGAGTGTTTTTTTTTAAACGGGT TGAATACATAGCTGTCGATTCCTTCCTCCAAATTTCCACATTATTTTCGC ATTTCCGAGAGGTGTGATGAAAGAATCAGGGTTTTTTAAAAAAATTTGGG ACGAAAATTTGTAACGAAAAATTTCACTATTTCACCAAAAAAATGTATTA ATTAATCCGGTTTATTACTCCCGTAACATTTATCAAATTTTTTTTCTTCC ACTTCCCTGCAACATACCCAGCAAGCACAAAACGTTGTTTTAACGTCCAA ATAACGTTATTTGGACGTTATGAATGTCAAATGGACGTTGATACGACGTC GAGTGCCGACTGGGTATGCTAATGAAACAATCCATAGTAAAAAGGTAACC AGTTGGCACACAACGTTGTTTCAACGTTCATCTAATGTTCACAACGTCCA TATAACGTTAGATGAACGTTGAAGCAACGTTGTTTGCCATCTGGGAAAGC ATGCGGTGCGAAATGTTATGGGTTCAATCCCCGCTCAGGTCCAAAAGTAC AAAAATGGTACTTGATGTCTCTCTACTTGACGCTCATTAATTAAAGAGAA GAATCGAGGGTAAGTGAAGCAATCCAGGGAGAAAGGGTGGCAGCCTCCCC TACCTTTGGGTAGACAGCTATCGAACGAGGAGCCGTTCCAGCGGCCGAAG ACCTTGACAAACAGCCGAAGACATGCTTAGACTGTTGAGAATCTAAATGT AGCATAGCAGATCTTCAGTTTTTAAAAATCAAATTATTCAAACTGTATTG GTTATCATACTGTTGAAGTTAAATATTTTTTTGAGTTGAAAAAAGCGCGA CTGTTTTCGCAGCGTCCTACTCAGAGTCTGATTCTTAAGACTTTATTACG TTTCCCAGCTGGCACACAACGTTGTTTCAACGTTTTTCTAACATTCACAA CGTCCATATAACGTTAGATAAACGTTGAAACAACGTTGTGTGCCANNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCTGGCACACAACGTT GTTTCAACGTTTTTCTAACATTCACAACGTCCATATAACGTTAGATAAAC GTTGAAACAACGTTGTGGGCCAGCTGGGTTAACTATTCGTTTTCTAAACT AGGTTTGCCAATCATTTCCACGATTAAAGAAATCCATTGAGGAAGAATGG CTCATACCGGCACACCTTCAATTATATTTACACCATGGAAAAGAGATTCT GGAAGAGAAATCTTTCCTGGATGTCTTTATAGAGGGCGCTACAGAGGCGG AACAAGATGACGGCAAGTTGGAACTCAATTTGATATCAAAAACTCCTCAA AATTTGACTGTAATACTGGTGCTACCAGAATATATGCAAGACGTAGGTCA GTAGGAATCATTTTCAATAAAAAGCTTGATCTTAGGCAAAAATAAAGAAA TGTAGCGTTTCCGGAAACCGGCCGGGTGAAAAATTTTTTCTCACCCGGCC GCAGACTTTCGTTTCATTTCGTTGATACATTAGTATTCAGGGTTTACTTC ATACTGTTCATACATAAAAGTTATCTTTAAAGTTATCAAAAATAGCAACA AAAACACTTTCTTTCTATTTTTCGCCTTATTAAAAGGGAACAGAAACTTC TGACTTCGGGTAAAAGATTTAGTTGCGGATAAAGAATTCAAGAAAAAGCT TTGTCAGATGATAAAATGTCGGAGAATTTTTGCAATTGAAAAAAAATTGT CGAATTCCACTTGGAAGCAGATCCTTTTAGCTCTATAGAAACAGTTTTTT CTTAAATTTATCAACAAATTTTTTCCAAATATTTCCTACAATTGTCAAAT CGAATTTAGGTCGAAATCTATTTTTCCAAATTAATTAGTGAATTTCAATT TAATGTTAAAAAGCTTTTTCGGCCATCCAATAATTTGTATCCCCCGCCCG CCAAAATGTATTCTTAAAAGCTTTTTTTCGTATGCGTAACAATATATAAT TTTCTCTTTCGCCTTTTCCAGGGATACCTACGGAAATCTCTATGCCCGAA ACTTCATCGATCAAGGACGTTGAAAAAACATTAACAGAAGAAATCTCTTT ACCAATATCCTTATACACTTCATCCCAACCATACAATGAACTTTTATACA TACGAAAAAGAATATTATTATACCAGCTTAAATCGTCAAATGAGGACGCT ATNAACGAGAGAGAACATTATTATACCAGCTTAAACCGTTAAATGAGGAC GCTATTGTAATGTACGCGTATCGAAAAATTCATTTAGCGATATACAGCTG TAAGAAGTGCAATAGTGAACAGGTGCCATTAGTCGAGACGTCGTTCGCCT TACAAGGGCAATTAACAGTGAAGGATGTTGTTCACACGTTTATTAAGAAT CAGAATGCCGAAGGGCATTTATTATATTGCTGTGATAACACAAAAGAGTC ACAGTATAAGCTTTCAGACATGAACTCGAAAAGTATTGAACTGAGTACAA ACCTTATTGATATACCGGGTGACTCCGTACTGANGAAAGTATCAAACTGA GTACGAACCTTATTGATATACCGGGTGATTCCGTACTGAGTTTCGAACCC GAACCAGTGAACGTTGAAGATGTACAAGTGGGATCACCCATAAAATGTGT TTTGATTTGATATGGATTTTTTCAATATAGCTGGGTGTCCGACAAAGTAC GAGCCTTGGATCACCCGTACAATGTGTTTTGATGTGACATGGATTTTTTT TTCAATATGGCTGGGTGTCCAACAAAGTACGAACGTTAAAGATAAACCGG GCGATTCCGTACCGAGTTTACAACTCGAACCAGTGGGATCACCCGTACAA CGTGTTTTGATGTGATATGGATTTCTAACAAAGGGTGTCTAACAAAGTAC GAACGTTAAAGATATACCGGTCGATTCCGTACCGAGTTTCCAACTCGAAC CAGTGGGATCACCCGTACAACGTGTTTTGATGTAATATGGATTTCTAGCA AAGGGTGTCCAACAAAGTACGAACGTTAAAGATATACCGGGCGATTCCGT ACCGAGTTTCCAACTCGAACCAGTGGGATCACCCGTACAACGTGTTTTGA TGTAATATGGATTTCTAGCAAAGGGTGTCCAACAAAGTACGAACGTTAAA GATATACCGGGCGATTCCGTGCCGAGTTTTCAACTCGAACAAGTGGGATC ACATGTTAAATATGTTTTGATGTGAATTTTTAAATGGATTTCGTCTAGTT TTTGCTATATTTTGATTTGTCGTGATTTTTTTTATATATTAGCGGTAAAG TTACTATAGAGCCACACCTTGATATTGATTAAACCTGAGATTTCGTACAA TGTTATCAATTTATACCAGTATGGTCTCTCATTAGTTTTCAAATTGATAC TTCATTTAACTATATCTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033832XLOC_033832Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053620-exon-scaffold_233-1575043694:52291..52494TCONS_00053620-exon-scaffold_233-1575043694:52291..52494Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1575043694:45694..46039TCONS_00053620-exon-scaffold_233-1575043694:45694..46039Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1575043694:45129..45307TCONS_00053620-exon-scaffold_233-1575043694:45129..45307Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1575043694:42269..42530TCONS_00053620-exon-scaffold_233-1575043694:42269..42530Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1575043694:40983..41142TCONS_00053620-exon-scaffold_233-1575043694:40983..41142Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1575043694:38875..40273TCONS_00053620-exon-scaffold_233-1575043694:38875..40273Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1510915933:52291..52494TCONS_00053620-exon-scaffold_233-1510915933:52291..52494Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1510915933:45694..46039TCONS_00053620-exon-scaffold_233-1510915933:45694..46039Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1510915933:45129..45307TCONS_00053620-exon-scaffold_233-1510915933:45129..45307Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1510915933:42269..42530TCONS_00053620-exon-scaffold_233-1510915933:42269..42530Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1510915933:40983..41142TCONS_00053620-exon-scaffold_233-1510915933:40983..41142Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1510915933:38875..40273TCONS_00053620-exon-scaffold_233-1510915933:38875..40273Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1491911889:52291..52494TCONS_00053620-exon-scaffold_233-1491911889:52291..52494Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1491911889:45694..46039TCONS_00053620-exon-scaffold_233-1491911889:45694..46039Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1491911889:45129..45307TCONS_00053620-exon-scaffold_233-1491911889:45129..45307Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1491911889:42269..42530TCONS_00053620-exon-scaffold_233-1491911889:42269..42530Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1491911889:40983..41142TCONS_00053620-exon-scaffold_233-1491911889:40983..41142Clytia hemisphaericaexon
TCONS_00053620-exon-scaffold_233-1491911889:38875..40273TCONS_00053620-exon-scaffold_233-1491911889:38875..40273Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:38875..52494 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0827449 0 0 0 0.547299 5.46935e-05 0.0322011 0 0.000841462 0.991452 2.4672e-08 0.569146 0.59749 0.597959 3.60676 4.0445e-06 1.27154 0 0.727931 0.513054 0 0 0.638077 0 0 0 1.6781e-05 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053620 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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