TCONS_00053639 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053639
Unique NameTCONS_00053639
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1855

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053639 ID=TCONS_00053639|Name=TCONS_00053639|organism=Clytia hemisphaerica|type=transcript|length=1855bp
ANGCACTCGAAGCGTTTTATTCGGCCCCATCGCATGACCGCCCAAGAGAC
AaTCAAGGATGGGAGAAAAATGGACTATTCGAATTCTATAAGGCCAAACT
AAAATACATCAAAGACAAAGATAAGAATTTAGAAGTGTTTGACCGTTCGC
CTTCCCCACCACCGAGTCCAGACGAAAGCAATTTAGATGACGATCACGAG
GTCAAGCAATGGATTAAACCGGCTCCAGATGATCGTAGTAGGTCACGGAG
TCGCAGCAGGAGCCGTAGCCCACGTGGTCGACGCAGTAGGAGCAGAAGTC
CGTATAGAAAAAGGTCTTACAGCCGAAGTCGATCAAGGAGTCATTCAGCC
AGTCCTCGTCGCAGTGAACGCAGGTCTCGGTCAAAAAGTCGCTCAGTATC
AAGGTCACCGGTCAGAAGAAGTCCTATACGGAGGAGTCCGACACCACCGG
AGAGTTTTGTTGGCTTTGCAACCAAAACGTTGGATTCGAAGATCGAGGAG
GACAATAAGGGCCATCAACTTCTAAAGAAAATGGGTTGGGGAGGCCAAGG
ACTTGGAAAGAACGAACAGGGTGTGGCAGATCCCATCAGGCAAGGAGAAG
TTCGTGACAAAATGGATAAATTCAAGgGTGTCGGAGCAGAAAAGAACGAC
CCATTTGAAAACTACCGGAAGACGAAAAGTTACACCTATTCTCGGCCATT
TCAAGGACGTAAATAAAAGATGGCTGACCCTAATGTCAATCTATATGTAC
AGTTGGACCGATATTGAACAACTCGATATGGGTGGTTTGATTAGCAGACT
AGGCGATCGGTGTTTTCTTTGCTCCAAGTAAATATCATCACTGTTGGATG
AATGGAGAGGTTGGATGAAGGAAGAGGTTGGAAATAACACCTCGAAGAAT
GGGcgttcatgtttttttttcagcctaATCAAGGATGCCTTCTTTTGGTG
TTAAACCAAGCTCTGGTTTCCATGTGTTTAAGAATATCAGCCCAAACAGG
CCAAAAGCTTCAAAACCACTCTAAGTGACAGTTTTCACTAATATCTTGAA
AAGGACAGCTTCCGATTATTGAGCCTTGAAAGGTCATGAAGATTGTCCGT
GTGCCCATCATTTAAGCCAAGCCTCCTACTTTACAATATGCTCATAAATT
ACTTAGAGTTCAACGGCTGTCTCGTTTTAAAACCATTATCCAGGTAGTTA
TATACGactcccgtcgtcgcaaacgtcGGTTtagcttgcacatcaaaagc
ccttaggaTGTCAAAGATGGTATTGCTGATGCTCTCTAACTttattttca
aggggaattcgAATAAGCTTCTTTCGATCTCCTATGTTCTATGACAATCG
ATTACCATagcattattttgaaaatgaggtGAGCGTTTCTTGTGACGTAA
TTtacgaaaaggtctattacaacCAATTTAATATGGTATTTTTTATAAGG
TTTTGTAAATAAAGTATATGAATAGGTAGTAATATTTTTACCATGTTATA
TGAGCACTGGAGgtttttttctaataaaaacaCAAGGATATTCCAGCAAT
AGattttatcggagtttttgatttttctaaaaaagcgatgcattgtggga
ttggaATTCCTAAGatatttctattgtaatacccctgaaacaatcccaca
atgcatcgctgttttagaaaaattaaaaactccgaTCAGGTCTATTGAAT
GAAAATGCAAAACGAAAGGATTTTCTGGAGACGCTAAAGATACGGAACTT
AAATGATAACTTCGATGATACTTGTTTTAATAGGCTAGGTAGTTTGACCA
GTTAAGCACGGAGCAGACCCTGGTTATAGGTGTAAAAAATTTCGCGAGCA
GGAAC
Run BLAST on NCBI

transcript from alignment at scaffold_233:156932..172276-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053639 ID=TCONS_00053639|Name=TCONS_00053639|organism=Clytia hemisphaerica|type=transcript|length=15345bp|location=Sequence derived from alignment at scaffold_233:156932..172276- (Clytia hemisphaerica)
ANGCACTCGAAGCGTTTTATTCGGCCCCATCGCATGACCGCCCAAGAGAC
AAGTATATATTTATTTTATTCAGTCATTTAGCTCACGGTTTTTTTTGATT
TCTCTCTTAGTTAGGCGATCTGTTTTAACCGTAAATTGAAACACTCAGGA
AAAAGTTACTCGAGAGTTAAAATTTCATGCTTGGGGAAATATGGACTGCC
AGAGTAATTATTTCCTTGGACAAGAAAGACTCCCGTTAGGAAATATTAAC
TCTCCTTCTTTGTAGGTTTTTTACTTTTCAATTATTAAGATGTGAATATT
TTCTCGGTAAATGACTACTCGTTGGAAGGAGTTAGAAAACAAGCCCATTT
TTAACTGTTCTTTTTGCTTCACCCGAGCTGCCTTCTCAGAGTCTATAACT
TAGGATGAAAGTTTCTAGTAACACAGGATAAAAAGTTCTTTTTTTATATT
CTTCACTTTTCGTTTTCATTTTCTTAACAGTCAAGGATGGGAGAAAAATG
GACTATTCGAATTCTATAAGGCCAAACTAAAATACATCAAAGACAAAGAT
AAGAATTTAGAAGTGTTTGACCGTTCGCCTTCCCCACCACCGAGTCCAGA
CGAAAGCAATTTAGATGACGATCACGAGGTCGAGCAATGGATTAAANGTC
TTTGACCGTTCGCCTTCCCCACCACCGAGTCCAGACGAAAGCAATTTAGA
TGACGATCACGAGGTCAAGCAATGGATTAAACCGGCTCCAGATGATCGTA
GTAGGTCACGGAGTCGCAGCAGGAGCCGTAGCCCACGTGGTCGACGCAGT
AGGAGCAGAAGTCCGTATAGAAAAAGGTAAGGTCTTTTTATCCGGATAAT
TATTCTTCATTTGAATTTTCCAGGAAAAGTGTCTGTAGGATTAACAATTT
TCAGTTATATTTACCATTTTACTTTTGATAACATTCCGAGAAAATCTAGT
CCAAGGCAAATTTTTGCTACCCCTCATATAAATATAATCCCCCACAATGC
ACGAGCTTTTTTTTGGAAGAGCCCATTGTTTATTTCACTGCCTTTGACCA
GATAATGATTGCCTTCCCTCTTTATGATTAAAGGCTTCCAAACAACATGT
TTTAAGTGATTGGATCTTAAATAGTTCTTAGGGCCTGAATGTTTTTTTGT
CTCGAATGGTTTCAAAAAAGAAAAATCTATTTATTTATTTATTTCTACTT
TCTCTAATTCGATCCTCGAAGGCTCAGAATTTCCTTCGAATTAGAGAAAG
ATTCCAATTTCATGATCTTTTTTTAAGAAGTAGTCTTTTGTAATGATATG
TTCGTAGTGTACACGTGTCTTTGTTTGATAAAGGAAAAAATAAGGATTCC
AATTACTTTAATGGGATTGCTTTCGCCGACGTTTTAGTTTGAATAATATA
AGAATTCGAATTACAGAGGTTCGAATTGGAGAGGTTCGAATTGGAGAGAC
TTGGACTTGTGTTTCTATTTATATCTATCATTTATAGGTCTTACAGCCGA
AGTCGATCAAGGAGTCATTCAGCCAGTCCTCGTCGCAGTGAACGCAGGTA
ACCCATAGATTTATAAAGCCCGAAGGGCTAGATGTCGCGCTTTAAGCTCT
TTCATGCAAAAAAAGTGAATATCGGAAAGAATATTGTTGCTATTGTTTTC
GAAAAACCGCGAAGCTTCTGATTGGTCAATCGCTGAAATTCTATTGTAAT
GTCACGTGACTTAGATAGGATTTCCTACCTAACTACGGCACACTTTTTAG
CAAAAGCTTTACATCTAGCCCTTCGGGCTTTATAAATCTATGAGGTAACC
CCGTCTGTGTAGATACAAGTCTAAGAGAATTGAATACATCAAACCGAAGG
CTTATTACTTTTCTCAACCAAGAAAAAGTTGAATCTTAAGATTTTTGCCA
TATTTCGGATGATGGATTGAATCTAGCGCTTTCTTTGTTTTTGTGTTTTA
CGTTTTTCAAATTTTGGCGGTAAATGTTACTTCCCATACAACGTTTTTAT
GAAAACAAGTGGCGTAAAAATTTTACATAGGAGATTCGATTCTAGCCCTT
GGAAAAAAATGAGTTTACCTTGAATAATAGAGGTTCGATATGTATGGAGA
TGGCCAAGTTCCCTTAATTCATCAAACAAATTTCTTTCGAAAATTTCTTT
ACAGGTCTCGGTCAAAAAGTCGCTCAGTATCAAGGTCACCGGTCAGAAGA
AGTCCTATACGGAGGAGTCCGACACCACCGGAGAGTTTTGTGTAAGTAAT
CTCTTCATTGCAGTGGTTTTTGTTTCCTGAGATTTAGGTCCTGAGATGTA
ATCTCAATTTTGTGTTGTTTTTTTTATCTGCTGATTTTTTAAATTCTCTA
AACAAACTCAAACTTGGAAATTTTTCTGTCATATTGGTGTGTGTGTTAAT
CGTTTAACCCTGATGAGAGACAACCCGGGTCTTAATACAACAAAGCCGGT
CCCGAAACTTTATCCTACATTTTTGTCATTTTGATAGCCTTCATTTGTAG
GACGTACATGATTAGACGAGTCGAGTTAAGAATAATATTAAATACCCTCA
TTGCATAATATACTGCTTGTAATTTGACTTCAATTCTCTTCGATTTCATG
CTTACATTTTGTTCAAGTGCTTTTTATGATACAAGGATGATATCTTGTGA
GAGTAGAAACTTTAGAGTAGAAAATAGAACGGACTTAGCAGATGCTGTAG
ATCTTGCTTATTAGAAGTTTCACCTTGCTTTTTAAAATAAACAGTTTTTT
TCGTATGGGTTTGGACTCTTGAAGAAATTCTAGCCGCAATAACCCACACT
CTTGATTTACTCGATTTTTTCTAGCGTGATTACGTGATTTGGATTTTTTT
CTTCGTGACTGCGCGATCAGAGGTCAAAACGTGATCGTTATTTGAAATTT
TTTTGAGCCGTGATACGTGATTTGGACTTTTTTCAAAGGGATGCGTGATT
ATCAATTTTTTTGCTTATTTGCGTGATTGTGATTGAAGACAAAAAATTGC
GCGATTTCTTTCGTGATCAGAGTTACCGCTGCGGAGGAGCCTCAAGTAAG
TATGTCGATATTTAATGCTGATGATCTTGCAGAATTTCAGTTCAAATGTT
ATCCATAACATAGCTATTATTCGTATTTTGCCTTTGCAGTGGCTTTGCAA
CCAAAACGTTGGATTCGAAGATCGAGGAGGACAATAAGGGCCATCAACTT
CTAAAGAAAATGGGTAGGTGTCGTCCTTGAATAAATATTCTCTTTGCTTC
AGGCGTGCTAAATACTCCTATCAACCCTTATCACTGATCTTTAACTACTT
GAATGGATCGGGCTTCCAAAATAAAACGAAGCGTATCCAGTTTAAAAGAG
CTGACTAGTCCGCCATCTTGTTTTCAATTCTTGTCGTCAAAAGTGCGATT
CGAACGTTCAAAAATCTAAGGTAAAGCGACCGTAGTGCAGTGCATCCGTA
GTGCATCCGGCTACGCTGCGCAAGGTTGTAGGTTCAACCCCCAGCCGGGT
CATACCAAAGATTCCCAAAATGGTACTTGATGCCTCTCTGCTAGATACTC
AACAATTAAGAGAAGGATCAAGGGTAAGTGGAGCAATCCAGGGAGAAAGA
GTGACGCCCTCCCCTACCTTCGGGCAGACAGCTATCGAAAGAGGAGCCTT
CGGGTCGCCTCCGACTGCGGTCGCAGACTTACTTACTTACTAAGGTAAAT
TTGAAACCAAGATGCCGGCTAGTCGACTTGATTGATCAGGGGGGGGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNATAAAAGAATCTTATTACTTTTTCTAA
AGAACGCGTCATCTCTATCACTTCAAATGACCAATTAGTGAAGTATCTTG
TAAAAACTCCAGCTCATCCCAAATACATCTATCAACCCGTGCTAAATACA
CCTATCACCCTATATTGCATAAGCTCACTGATCTTTAACTACTTGAATGG
AACGGGCTTCCAAAATAAAACGAAGCGTATCCAGTTTAAAAGAGCTGACT
AGTCCGCCATCTTGTTTTCAATTCTGGTCGTCAAAAGTGCGATTCGAATG
TTTTGAAATTCGAACGTTTTGAAATTCGAACGTTCAAAAATCTAAGGTAA
AGCGACCGTAGTGCAGTGGTAGAGCATCCGGCTACGGTGTGCAAGGTTGT
AGGTTCAACCCCCAGCCGGGTCATACCAAAGATTCCCAAAATGGTACTTG
ATACACCCCTGTCTATGTGCCCCAGTGGGTTTTAAAAACCCAGTAGGGCG
TGTTGTGACAAATTTAAAAGTCACATTCATTTTCTAAAAATTGAGTGGGG
TGATCAATCTTTTCTTGATTTTCACTGGGGTGAGGGGAAGTTTTAGTCAA
TTTTTTGTGTGAAGTAATAGTAGTTAGTCATCATCATCATCATCATGGTC
CGACCGCAGTCGAGACCACGGCATTCACCATTTCCCTCCAGACATCTCTG
TCCCGCATTGCTGTATTCAGGTCTTCCTTACATAATCCAGTATCTCGGGA
GATAACGTCTAGAAAGGATAGTTTTTTACCTATACGGATGGTTGTCGGGG
GCTTCCATAGATATCTGTGAGAAATGTAACAGGATGGCGCGCGTCGCACT
TTCTTGTTATATACTCTTGTCTGTGAAAGGATCAACTGAAACACGTAAAA
TATAATCGACAACAATGATAATCAAAAATGGGGCAAGAGTATCACCCTGA
AGTATTCCTGCCAGAATTTCAAAAGGGGAGGTCTCGTCTTCGGTAGTAAG
TATTTTCGAATATGAGTTGGTGTAAAGAAATTTGATGTCGGATAGTATTT
TGGGGGAATACCATAGAGTTCCAGGATTTCAAACATTTATTTTCTGTCCA
CAGAGTCAAATGTCTTTGAGAAATATCTACAAAAACAAGGAAATGCCTAA
GTTACAGAGCTCTATTTCTTTGATAAGGCGACGAAGGCAGAAGGTTCGAC
TAATGGTAGAACGTACCCTGAGTACCAGAGGTTGAGTTATCAAAGAATAC
TAGCCGTATGCGACTAACACGCACGCTGCGTGTCCCAATCTAGCAAATCA
CTATACCTTATCGGGGAAAAGAATGTCGGAGTTTTATTTAGTTGGGGTTT
TTTTCGTCGGGGAAAAATTTCGTCACCTAGAGAATTTCACTTTCCCCCGA
CCAAAATTTCAAATTCGTCACTTTTCCCCGACCAAATTTACAAATTTAGT
CACTTCCACCCGACTAAATTGTCCAAATGAAATGGTTTCCTTCACTACCT
CGAAAATAGATCTTGTGATTCGACGTTTAAAGCACTAATTTCGGTTAATA
AAGACGTAAAATATTTGGATTTGAATTTTGGTTAGGGGGAAAAAATCGAG
TAAAAGTTTTGGACGGGGATAAAAAAATCGGGTAAAAGTTTTGGTCGGGT
GATGAAATGTCGCAGATAAATTTCGTCACCTCCTCAAAATTGTAAACAGA
AAGTTTTAAAAAGCATCTGCAGAATGAAAAATTATATTTTGGAAGAAGGT
TGATTTTATCCGATCCAGCTCCCAGGCACCTGTATAGAACATATCATCTT
AGCGTCTCAAAGTTAGTCCAGTGGTAGGAAATCTGCATACGGTGCAAAAG
AATGATGGTTCAACGCCATGAAGAGGAGGCTTTGTACAGCTTTGTTAGAT
TTTTGAAAACTTTTTACAAAACGTTGTAAATTGTACAAAACGTATGCGCA
GCGTCGCACGCTGCATCCCCCAGAAATCTCCAAGTGTAACTGAAATGAGT
TTCTTTCAAAAGAAATCTTCTACATGATTCCCAAATGTATAACAGTAATT
ACTAAACTATTAATTATAGAAATGTCACTTTAATTGAATCGAAATAATAG
ACAGACTTTATGTTTTGATTCACTGACTCTTTTTGAAAAGCATTGATGAC
ATTTTTTAGTTGTGTTTTCAACAACGGGAATAAAAATATCAACTCTGAAC
TTAATCCAAGATCTTGGATGGTCGTCATGGTTACTTTTCTCTGCGTTGAT
TGCGCGCTGAATAAAATCTCGATTGGTCGGCACAAATCAATATATGATTT
TGGTCTGTGCTTTTCACGGTAGGTAGAACCATTGAGTTTAAAGCCCGAAG
GGCTAGAGTTCAATCTCTAACCTTTCTCAGGCAAGAAAAAGTGAAGCCTT
AAAAATGCGCGGCATTTGTTTACGATTGATATTTTTTTCGAAATTTAGCG
GTAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACCAGGCGAACCGCT
CAAGGCCGCGCAACTTTAGTAGGATTTGTTGGCTTCAAATCCTACCAAGG
AGATTGACTTCTAGCCCTTCGGGCTTATACTTCATTGGGTAGAACGACCT
TCTTTCCTGAGTATTTCTCAGAAGTAAGCGGGTCTGAAATTTGAACACGT
AGGAGAGTGAAATTATCAGGAAGTTTTTGTTTCTTACCAAGGAGATTTTG
GGAATGGGTTTTCCAGTTTTCCAAGCGTTTTTTGAGAAAGCCACCCTTAA
TTTGTACAGAGGAGATTGAATTATTACCGGATAAGTCCTTGACAGTTTTC
CATGTAAGATTGTTGCTTGTTTGCATGCTGATTGGAAAGATCATCGATTT
TACCAGAGATGAAAGCTGCCTCGGCGCTCAGATGAGCATCACCCAGAGTC
TTTTTGGACCTACCCCGGTGGGGTGTAGGTCCTATAAATTAACCTCTGTT
CGTCCGTTCGTTCGTCCGTTCGTTACTAGCTTTTCTCGGGATTGGCTCAT
TAGTTTTTCATAATTTTTAGCACAAAGATGCAAAATGGTAATGCGCAAAA
TGTGACGGAGCCCGCTTTTCGAAAAAAATTCATTTCCGGCCGAAAATGCC
GGAAATATGCCGGAAAAACCGGATTTTTGGCATTTTCTCGAGATTTCATC
ATTAGTTTTTCCTGATTTTTGGCACAAAGATGCAAAATGGTAATGCGCAA
AATGTGACGGAGCCCGCTTTTCGAAAAAAATTCATTTCCGGCCGAAAATG
CCGGAAATATGCCGGAAAAACCGGTTTTTTGGCATTTTCTCGAGATTTCA
TCATTAGTTTTTCCTGATTTTTTGCACAAAGATGCGTATTAGCAATGCCT
AAAACATGGATTAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGAAATTTTGC
ACACTGATGCAAAATGTCAATACCTAAATTGTGACGAAGCCCGATTTTCG
AAAAAAATTCATTTCCGGCCGAAAATGGCGGAAATATACCGGAAAAACTG
GATTTTTGGCATTTTCTCGAGATTTTATCATTAGTTTTTTCTGATTTTTC
GCTCAAAGATGCTTATTAACAATGCCCAAGNTTTTTTCCCGGCCGAAAAT
GCCAGAAATATGCCGGAAAACCGTTTTTTTTTACATTTTCTCGAATTTTC
ATCTTTAGCTTTTTCTGATTTTTGCAGAAAGATGCGTATTTGCAATGCTC
AAAACATGGCCGAGTTCGATTTTTGAGAAAAAATTTTTGGACCTACCTGG
AGGTCCTATAAATTAACCTCTGTCCGTTCGTCCGTCCGTCCGTTCGTCCG
TCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGAT
TTTTCGCTCAAAGATGCTTATTAACAATGCCCAAGACATGGCCGAGTCCG
ATTTTTGAGAAAAAAATTTTTCCGGCGGAAAATGCCTGAAATATGCCGGA
AATCGCCGTTTTTCTAGATTTTCATTGGACATTTTCCTTATAATTGGTTG
TTTTTTCATTCAAAAACATTTTTAATAGCAATGCCCACTATCAAGCATGT
TTCAATTTTCAATAAAATTGATTTTTGAAGCCGGAACTTTTTTTAAAGTT
GCCGGAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCG
AGCTGTCCTTTATATTTTTTTATGAAATTTTTCACACTGATGCAAAATGA
CAATACCTAAAATGTGATGGAGCTCGATTTTCGAAAAACATTCATTTCTG
GCCGAAAATGCCGGAAATATGCCGGAAATATGCCGGAAAAACCGGTTTTT
TGACATTTCCTCGAATTTTCATCTTTTGTTTTTTCTGATTTTTTGCAGAG
AGATGCGTATTCGCAATGCTCAAAACATAGCCGAGTTCGATTTTTAAGAA
AAATTTCTTCTGGTGGAAAATGCCGAAAATCGCCGTTTTTGCAGATTTTC
ATTGATGATTATTTCCAATTTTTTTCGCACAAAAACATTATTGATAACAA
TGCTCACCATCAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCGAC
CAGAACTTTATGTTTATTTTTTCCCTACAACCCTTCCCTCTCCCCACCAT
CAATCAATGATGAATTTCTTGCGTTATGCATTTTCGCTAAACGCTATGTT
TTCTGACTGATTTTTTTCATTTTTCTCCTTGCATTGCTATCTAACTTTCA
TCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTCCGGTTGAAAATGCC
GGAAATTGCCGTCANNCTAAACGATATATTTTCTGACTGATTTTTTTCTC
CTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTA
GCTTGTTTTTTTTTATCTAATCGAGCTTATCTCCTCCTAGTTGCATACTT
ACTAAAACATGAAACGGCAGGGAAACGGCAGGGAAACGAGTGGAAACGGA
GGGAAACGAGGGGAAACGGGAGACAAAACTGAAAAGTATTGGAAACCAAG
TCATTTTCCGTCTGGAAATCGAAGGGATAGGTTGATTTGTCTATATTGGA
TAGCTTTTTCAATTTATAAGATCGTTACTTAAGACAATTACATTCAGCTG
GAGGTAGCTTCAGTTATTTTCATTGCAAATTATCTTGTAGGATAACAGGA
CCACAGCTCCAAATTTATTAGTAATTTATCTTTGAAAACTTGAAGTCTGA
TACCATGTCCATGCTGATACTTAGGGTAGGTAATTTCTTAGCTTTTATCA
CTCCCTGCACTGCATCTGTATCATACGTTAAAGCATTATGATAGGAAAGA
AACGAATAAGAATTTGTTGGGTACGAAATATTTCATCGACTGTTATTTTT
TCAAAGCCACTGATTTGGTTATAATGACGTTGTTACATCGACCACGCAGT
ATTTTTTACTGTTTCTATCCGTTTCAAATCAAGTCCTATAACGGCTTCGC
CTCGATCAATTTTGTTTTTTTGCTTGTCTATGGTCAATGGGGTACAGCTA
CAGAAATATCAGACAACTGACATGCGAGAGGCTCTTCAACCTCTTATATT
CTAACCGTTTCCCCTAGTTTCCCTGTCGTTTCCTCTCGTTTCCAAGTCAT
TTCCATGTCGTTTCCCCTGTCGTTTCCCCTCGTTTCCCTGCCGTTTCCCC
TCGTTTCCCTGCCGTTTCCCCTCGTTTCCCTGCCGTTTCCACTCGTTTCC
TGGGCGTTTCACGTTTTAGTAAGTACGTCCTAGTTGGTCTTGCATGATAG
GTTAGAGATATTTTCTTGAGATTTCTTCTGGCTTCAGAGATATCAACAGG
GGTATATATATAATATTTTTTTTTTATTTATAAGTAATGACACGAACATA
GAATACAAACACTAAAAGGTTCCAGCCCTCCCGCAAAAAAACCGCTAGAT
TATACCGCCAGGAGAGATGAAAAAGAAAAACGAAAAAAAAAACAATAGAA
AACTTAGGCAAAATTAAACAAAAAACAAACTAAATGAGCATTGTGAACAA
TCAAAACAACGGACCCTCGAATCGACCGGTAGCTTGGATAAATTTTACGG
TTATACTTATTATATCATGATTTAGGTTGTTACTAAAATTCGAATCCCCA
AAGAGAAGTATTCTGGAAAGTATTCTTGGGTTTAATGGTAGCAAGCATAT
GTCAAGTTGAAGAAGGCTGTCAAACATTACATGTCTATCATCGGAGAAAT
ATATATTTCGACCGTTTAGGCATTTTAGCAGAACTGAAAGTGCGACTTCC
TTGTTAAATTTTATCAATTGGTCGTAAACGTCATCAACATTACTGGAGGG
GATTTGAGAAGTGGAAAGTGCAGAGAACCTTGCACTTTGCTTTAATTGGT
TGGGTTTAGAAGGTTTTGAGGTAATCTTATTGAGCGCGGTCACCTGAAGG
AGTAGTTAGTAGATATTGTCCTTTGTGCCATTCATTGTGTAATGTCTTAA
TGAAAGAAAGGTTCTAAATTACAAAATGTAGTCTGAAACCGTTCTAATAC
AATCACAGAGATGTGCCGAGCCTACTAAAAGAGAATATATTCTTCAACTC
CTTTTTGGAAATCTTTGAAATTTTTAGCAGTTGAATAATTCTAGAATCTA
AATCTCACCGGGTGACCCAAAAAAAGTATAAGGCTAACTGTGTCCAAAAT
AGGGTGAATTTTAATGAATCCTTTTTTCATCGTAAAGAAAGGTAAACTTT
ATGTTGGCCGGTGAAAAAGAATGCGGCTATAATATTTTGATTTTTCCCAG
AAAGGTAAACTTTAAATTTATTATTTGACTTGTTTATGGACTTTTTAAAA
AGTGAATTTTGACTTCCAAAGCTTAACTTGAGAACTACTGAATCAAATTT
AAAGGTCATCATGTCTAGTTTGCTAAGAATATATTTAGTACTGGTAAAAA
GCTCCAATGTGTGACAATTTAGTCAATGAAGCAGGGTACTGTTAGTTTAA
ATTAAATTGAAAATACCTTGGTACTATAAGATTAAAATGTCTTCTTATAC
AATTTGATTTCTTTAGAAACGTTCGCTAAAAATACCTCAACACCCTTTGT
CCGTTATCAGAAATAAAAATCAAAAGTTTTGGGTCTATTAAAATATTATT
AAATTTTATCATCAGGACCTTATTAATAGAAAAATTAATTTTCAGTGGCC
ACAAACTTCTTTACTTTTATTGATGGATGGAGCGATAAAGTGAGATTTGC
ATAAGCAGCAAGATAACAACGAAGTGTTGTACAGTTTTACTGCCTTGATC
GAGAAAAAAAAATTGAGCCTTTTTTGTGTATTTCATTTTCACAACATGGA
TTCTATAAGAGAAGAGGAGATTCTAGTGGGGTGACCCTCTTTTGATGGGA
AAATTCTACCAGGTACATCAATATTAGAACATTTGAGTGTGGTTTCTTCG
TTATTTTCAAGGGGGTCATTTTCAGCTACAAGATTCCAGTGGGGTGAGTG
ATTTATCTAGTGGGGTGAAAAAATGGGCCATTTTCGGAAATATTTTCACT
GGGGTGGCCAGTGGGGTGGATCCCACTGGGTCACAGAGACGGGGTCTCTA
CTAGATGCTCAGCAATTAAGAGAAGGATCAAGAGTAAGTGGAGCAATCCA
GGGAGAAAGAGTGACGCCATCCCCTACCTTCGGGTAGATAGCTATCGAAA
GAGGAGCCTTCGGGTCGCCTCCGACTTCGGTCGCAGACTTACTTACTAAG
GTAAATTTGAAAACAAGATACCGGCTAGTCAACTTGATTGATCACTGGAC
ACACACATCCATCAGAAAGCTCTGAGCAGTTATATAGGAATATTTTTAAA
AGGGTGATTTCGAAAGATGTTTGTTCTCCAACCAAAGTTAAGCCTTTGCC
CATAGTTTGTTTGACCAAGTTTGCTCAAACTCTCTTGTTTTTTCACCAGG
TTGGGGAGGCCAAGGACTTGGAAAGAACGAACAGGGTGTGGCAGATCCCA
TCAGGCAAGGAGAAGTTCGTGACAAAATGGATAAATTCAAGGTATCTATC
TAATCCTAATTTCATTATTTTATCTGCAAGGAAATTCAGGGTCCGAAGCA
AAACTTCCAAATATTTTTATCGAAGTCTTCTCGAAGTAAATGTCCACATC
AGTTTTTACTGCCACTGTATGATATTGTATATATTTTGTATATATAGTTT
TGTATATAGAACACGACCTGTGTTGACAAATAAAATCTTACATTGTAGCT
AAAGTCAAAACTCTACTGTTTTCTTGCTCAAAGACTTGTAAGTTGAATAT
CTCGACTTTTCAAAAGAGTTTTGCTCAGGACGACCATTGAAAAAAAATGA
AGTCAAAATATCTCAGACCATCTGATTATTCCTTTACTCTTAGGTTCCAA
ATAAAAGGGGGGGGGTTGGAAGATTCTCGAAATTTTAATAAACGGGGAGG
GGCTAATTGCCGGGAGGTTGGAAATTGTACTTCTGNGGGGGGGGGGAGTC
CTAATAAGGTCCGGGGAGGTTGCAAAACTTTCGAAAAATTAACAAGCGGG
GTTGGGGCGTCTATTTGGAACCCAAGAGTAAGCCTTCTTTTCGCATTGTG
AAGCCAAATATCCAGTAATTGATAATTTATTTTTTATCAAACTTGTAATT
CTTTTTTCTTTCCAGGGTGTCGGAGCAGAAAAGAACGACCCATTTGAAAA
CTACCGGAAGACGAAAAGTTACACCTATTCTCGGCGTAAGTTTTCAATTT
CGTTTACAAACAACAAGACTTCGAACACATCTTCAGATTGCCGTCGAATA
TTTTGTGTTTTATTTTTTTGCAGATTTCTTTTCCAGGCAAAAGAATGAAA
ATTTCTTTTGAATTGATATAGTATCAATACACTGGTCTCGCTAAAGGTTT
TTACAAATTTGTGGACTTTGTTCGCCTTCTTTTTAGCATTTCAAGGACGT
AAATAAAAGATGGCTGACCCTAATGTCAATCTATATGTACAGTTGGACCG
ATATTGAACAACTCGATATGGGTGGTTTGATTAGCAGACTAGGCGATCGG
TGTTTTCTTTGCTCCAAGTAAATATCATCACTGTTGGATGAATGGAGAGG
TTGGATGAAGGAAGAGGTTGGAAATAACACCTCGAAGAATGGGCGTTCAT
GTTTTTTTTTCAGCCTAATCAAGGATGCCTTCTTTTGGTGTTAAACCAAG
CTCTGGTTTCCATGTGTTTAAGAATATCAGCCCAAACAGGCCAAAAGCTT
CAAAACCACTCTAAGTGACAGTTTTCACTAATATCTTGAAAAGGACAGCT
TCCGATTATTGAGCCTTGAAAGGTCATGAAGATTGTCCGTGTGCCCATCA
TTTAAGCCAAGCCTCCTACTTTACAATATGCTCATAAATTACTTAGAGTT
CAACGGCTGTCTCGTTTTAAAACCATTATCCAGGTAGTTATATACGACTC
CCGTCGTCGCAAACGTCGGTTTAGCTTGCACATCAAAAGCCCTTAGGATG
TCAAAGATGGTATTGCTGATGCTCTCTAACTTTATTTTCAAGGGGAATTC
GAATAAGCTTCTTTCGATCTCCTATGTTCTATGACAATCGATTACCATAG
CATTATTTTGAAAATGAGGTGAGCGTTTCTTGTGACGTAATTTACGAAAA
GGTCTATTACAACCAATTTAATATGGTATTTTTTATAAGGTTTTGTAAAT
AAAGTATATGAATAGGTAGTAATATTTTTACCATGTTATATGAGCACTGG
AGGTTTTTTTCTAATAAAAACACAAGGATATTCCAGCAATAGATTTTATC
GGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTGTGGGATTGGAATTCC
TAAGATATTTCTATTGTAATACCCCTGAAACAATCCCACAATGCATCGCT
GTTTTAGAAAAATTAAAAACTCCGATCAGGTCTATTGAATGAAAATGCAA
AACGAAAGGATTTTCTGGAGACGCTAAAGATACGGAACTTAAATGATAAC
TTCGATGATACTTGTTTTAATAGGCTAGGTAGTTTGACCAGTTAAGCACG
GAGCAGACCCTGGTTATAGGTGTAAAAAATTTCGCGAGCAGGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033834XLOC_033834Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053639-exon-scaffold_233-1575043694:172225..172276TCONS_00053639-exon-scaffold_233-1575043694:172225..172276Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:171649..171796TCONS_00053639-exon-scaffold_233-1575043694:171649..171796Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:171451..171563TCONS_00053639-exon-scaffold_233-1575043694:171451..171563Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:170730..170789TCONS_00053639-exon-scaffold_233-1575043694:170730..170789Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:170036..170122TCONS_00053639-exon-scaffold_233-1575043694:170036..170122Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:169064..169137TCONS_00053639-exon-scaffold_233-1575043694:169064..169137Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:158986..159077TCONS_00053639-exon-scaffold_233-1575043694:158986..159077Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:158292..158361TCONS_00053639-exon-scaffold_233-1575043694:158292..158361Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1575043694:156932..158090TCONS_00053639-exon-scaffold_233-1575043694:156932..158090Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:172225..172276TCONS_00053639-exon-scaffold_233-1510915933:172225..172276Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:171649..171796TCONS_00053639-exon-scaffold_233-1510915933:171649..171796Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:171451..171563TCONS_00053639-exon-scaffold_233-1510915933:171451..171563Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:170730..170789TCONS_00053639-exon-scaffold_233-1510915933:170730..170789Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:170036..170122TCONS_00053639-exon-scaffold_233-1510915933:170036..170122Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:169064..169137TCONS_00053639-exon-scaffold_233-1510915933:169064..169137Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:158986..159077TCONS_00053639-exon-scaffold_233-1510915933:158986..159077Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:158292..158361TCONS_00053639-exon-scaffold_233-1510915933:158292..158361Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1510915933:156932..158090TCONS_00053639-exon-scaffold_233-1510915933:156932..158090Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:172225..172276TCONS_00053639-exon-scaffold_233-1491911889:172225..172276Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:171649..171796TCONS_00053639-exon-scaffold_233-1491911889:171649..171796Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:171451..171563TCONS_00053639-exon-scaffold_233-1491911889:171451..171563Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:170730..170789TCONS_00053639-exon-scaffold_233-1491911889:170730..170789Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:170036..170122TCONS_00053639-exon-scaffold_233-1491911889:170036..170122Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:169064..169137TCONS_00053639-exon-scaffold_233-1491911889:169064..169137Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:158986..159077TCONS_00053639-exon-scaffold_233-1491911889:158986..159077Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:158292..158361TCONS_00053639-exon-scaffold_233-1491911889:158292..158361Clytia hemisphaericaexon
TCONS_00053639-exon-scaffold_233-1491911889:156932..158090TCONS_00053639-exon-scaffold_233-1491911889:156932..158090Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:156932..172276 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.45788	1.2373	1.11393	1.40667	0	0	0	0.197385	2.13695	3.26193	3.28835	1.2364	1.55778	1.96616	1.90094	2.07411	2.46136	2.14758	0.611788	1.04676	2.33588	3.16477	2.83015	1.91313	0	0	0.412993	0.492449	0.949381	1.63973
Blast
[Close]
BLAST of TCONS_00053639 vs. Swiss-Prot (Human)
Match: CHERP (Calcium homeostasis endoplasmic reticulum protein OS=Homo sapiens GN=CHERP PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 5.437e-20
Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 3 
Query:  468 ATKTLDSKIEEDNKGHQLLKKMGWGGQG-LGKNEQGVADPIRQGEVRDKMDKFKGVGAEKNDPFENYRKTKSYTY 689
            A    DS++ E+NKGHQ+L KMGW G G LG  EQG+ DPI+ G+VRDK D++KGVG   +DP+ENYR+ KSY++
Sbjct:  831 APPIPDSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENYRRNKSYSF 905
The following BLAST results are available for this feature:
BLAST of TCONS_00053639 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHERP5.437e-2057.33Calcium homeostasis endoplasmic reticulum protein ... [more]
back to top