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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053642 ID=TCONS_00053642|Name=TCONS_00053642|organism=Clytia hemisphaerica|type=transcript|length=599bp
TCTATACCTACAACATCAGTCAATCTGAAAAAGCTACATACGCGTGAATA
TAAATTGATTAGTAATTAATTGGTAAAATTAAACGCGCCTacatttggaa
agaaaacaCCAGCataattttggatgatgaagttGATTCTTGTTTTCCTT
CTTTTGGTTACTTTGTACCATTTCTCTGAAGGAATAGGTGAACAAGGAAA
CAAAGGTTCAAAAGGTCCGAGAGGTTCAGCTAGTGTTGTTGGACCGCAAC
ATGATTTTAATGTTGAGTTTGAAGCAAATAGACAAAGACGAACGATCCTT
GAGAAAGGTGATCCAGGACCACCGGGAAGTAAAGGTGAATCAGGACCACG
GGGCAGTAAAGGTGCACGGGGTGATCTTATTTAGATCCAGTCCTCTTGAC
AGCTTATCTGATTTGAAATTATTGATGGCTCCTGTCAATCTGAGAATATT
ATTATGATGTATTTACTAGATTTTCTAAATGGTATGAAATATATATTCTA
CTGACTCGCTTTTATGTTAAAATTTTATCGCTCTCTAATGCCTCATCTAT
ATATCCTATCATTATAAATTCTTAGCTATTTGCAAAGACTAGGTCCGAG Run BLAST on NCBI transcript from alignment at scaffold_233:205535..206862- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053642 ID=TCONS_00053642|Name=TCONS_00053642|organism=Clytia hemisphaerica|type=transcript|length=1328bp|location=Sequence derived from alignment at scaffold_233:205535..206862- (Clytia hemisphaerica)
TCTATACCTACAACATCAGTCAATCTGAAAAAGCTACATACGCGTGAATA
TAAATTGATTAGTAATTAATTGGTAAAATTAAACGCGCCTACATTTGGAA
AGAAAACACCAGCATAATTTTGGATGATGAAGTTGATTCTTGTTTTCCTT
CTTTTGGTTACTTTGTACCATTTCTCTGAAGGTAAGTGTAGTTCACTGAC
ATTGATATATCCCTGGACCAAGCTTTATCCGCCATCTTTGATTGAGTAGT
GTTTATCAAAGATTTTGCTTAGCCAGGTTTGAGAAACTTGGTCCAGGGTA
TATAAAGATCAGTTGTGTAGTTCCGCGGGAGGTGCACGATTTAAAGACTG
CCATACATGTTTTTTTTTATAAGCATAACGCTTATAAGCATATGAAGGCT
CAGATTTGCAGTATTCCTAAGCATAACATGAGCATATATGTCAGCCATAA
TATTTTTCAAGTGGTCATTTTTATCTGTTTTTGTTTCATTTTTATCTGGT
TTGGTAGAGGTCAAGTAAAAAATAAGACATTCCACGGCTAGCTACATTCC
ACTGCTCCCAAAATCTGAACAACTTTTTTACAAAATTTCTGAAATTTCAT
TAAAAAACTTGGCTCGGGGTGAATCATAAGCATAATTCTTAAGCATATAA
TAAGCATAAACTATGCCTGGATGCTTTGAGAACTTAAGCATGCACGAGCC
TGACCAAGAGGCATACACTTGCTTATAAAAAAAAAAACATGTACGAGCAG
ACAAGAATGAGTCTCAAAATTAGACCCTTACAGTAGAGAGTAGTTTTTTT
TCACTTTCCATGCTCTCACAGAGGTTTTCTCAATACTTTACTCGTCGAAG
CTTTAATATTCTTACATAGTTTTTTTTTAATGAAAAACGCGTATTTCCTT
TATTCTTTAGGAATAGGTGAACAAGGAAACAAAGGTTCAAAAGGTCCGAG
AGGTTCAGCTAGTGTTGTTGGACCGCAACATGATTTTAATGTTGAGTTTG
AAGCAAATAGACAAAGACGAACGATCCTTGAGAAAGGTGATCCAGGACCA
CCGGGAAGTAAAGGTGAATCAGGACCACGGGGCAGTAAAGGTGCACGGGG
TGATCTTATTTAGATCCAGTCCTCTTGACAGCTTATCTGATTTGAAATTA
TTGATGGCTCCTGTCAATCTGAGAATATTATTATGATGTATTTACTAGAT
TTTCTAAATGGTATGAAATATATATTCTACTGACTCGCTTTTATGTTAAA
ATTTTATCGCTCTCTAATGCCTCATCTATATATCCTATCATTATAAATTC
TTAGCTATTTGCAAAGACTAGGTCCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053642-exon-scaffold_233-1575043694:206682..206862 | TCONS_00053642-exon-scaffold_233-1575043694:206682..206862 | Clytia hemisphaerica | exon |
| TCONS_00053642-exon-scaffold_233-1575043694:205535..205952 | TCONS_00053642-exon-scaffold_233-1575043694:205535..205952 | Clytia hemisphaerica | exon |
| TCONS_00053642-exon-scaffold_233-1510915933:206682..206862 | TCONS_00053642-exon-scaffold_233-1510915933:206682..206862 | Clytia hemisphaerica | exon |
| TCONS_00053642-exon-scaffold_233-1510915933:205535..205952 | TCONS_00053642-exon-scaffold_233-1510915933:205535..205952 | Clytia hemisphaerica | exon |
| TCONS_00053642-exon-scaffold_233-1491911889:206682..206862 | TCONS_00053642-exon-scaffold_233-1491911889:206682..206862 | Clytia hemisphaerica | exon |
| TCONS_00053642-exon-scaffold_233-1491911889:205535..205952 | TCONS_00053642-exon-scaffold_233-1491911889:205535..205952 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:205535..206862 - |
Blast
The following BLAST results are available for this feature:
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