TCONS_00053673 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053673
Unique NameTCONS_00053673
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2249

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053673 ID=TCONS_00053673|Name=TCONS_00053673|organism=Clytia hemisphaerica|type=transcript|length=2249bp
GGCAGACGAGCTCACAATCTACTCTTTGGTCGTCATGGAAACTGCTCGAA
AGCCGCGCCTCGAAACGCCATAGGAGGAGAAATTTAATTGATCATCATGG
CTGATTTGAATGTGGCAGGTTTGATCAGTATCATCATCTTTTATTTGGCT
ATCCTTGGCATCGGTTTATTTGCTGCCTGGAGAAAGAACAAACACACGAA
AGAGAATGCGCAAACCACACAAGACGAAACGAATGAAGTTATTTTAGCTG
GAAGAACTATTGGGATGTTTATTGGTTGCTTCACTATGACTGCAACATGG
GTTGGTGGTGGTTACATCAATGGAACAGCAGAGTCAGTGTACAATGATGG
TCTGGTCTGGGCTCAAGCACCATGGGGTTATGCTACCAGTTTAGCGATGG
GTGGTTTCTTTTTTGCTCGCAAAATGAGAGAAGCGGAATATATCACCATG
TTGGACCCTCTGCAAGACAAGTACGGTCGTGTGATGGGTGCTTTCCTTTA
CATTCCTGCTTTCCTTGGTGAAACATTTTGGTCTGCATCTATCCTGGCAG
CTCTTGGTGCAACATTGACAGTTATCTTGGGGTTGAACATGAATATTTCC
GTCATCGTGTCGGCGTGTATTGCTGTCGGCTACACCTTTTTTGGTGGACT
TTATTCAGTTGCATACACGGACGTCGTTCAATTGATTTGCATTGCGGTCG
GATTGTGGTTGACGGTTCCTTTCTCTTTGACCAATGAAAACGTTGAATCG
ATTGGTGCACGTAAAGAGGAATGGCTCGGCCAATTGTATGGTGCTAAAGT
CGGAAAATGGATTGATTACGCTTTCTTATTGatTTGTGGAGGTATTCCAT
GGCAAGTGTATTTCCAACGTGTATTGTCTTCCAAGTCAGCTCACCGTGCT
CAAATTCTCTCCTTCGTTGCTGCTTTCGGCTGTATTGTGCTGGCTATCCC
TGCAGTTCTGATCGGTGCCGCCGCCAAAAGCGCTGACTGGGGAGCAGTAA
GTGGGGCAGTGGACGCCAACCTTGTGACCAACAAAACCGGAGAGTGGGTG
ATCACGGATACCAGACTGGTCCTCCCCATGGTTCTTCAATACTTAGCTCC
TGGATGGGTGTCTTTCATTGGTCTTGGTGCCATCTCAGCTGCTGTCATGT
CTAGTGCTGACTCGTCAGTTTTGTCTGCTAGTTCCATGTTCGGACATAAT
ATCTACAAGTTGATCATCAGAAAAAATGCCAGTGCCAATGAAATTATTTG
GGTGATTCGTATTGGTATCATCTTTGTTGGTATCATGGCAACGCTGGTTG
GGTTGACGGTCGACAGCATCTACGCTTTGTTCCATTTGTGCTCGGACCTG
GTCTTTGTCATCCTCTTCCCACAGCTGGTGGGTGCTGTCCACATCCAAGA
TGTCAACACGTATGGATCCATATGTGCTTACATAGTGGGATTGTTCTTAC
GCATCACCGGTGGAGAAGAATTGATCGGGTTCCCGGCTACTTTTAAATAT
CCTTACTATGACGAGACGTACAGTAATGGGAAAGGATCACAAAATTTCCC
CTTCCGTACCCTAGCTATGATTATTTCTTTCATCACGCTCGTCTCTGTTT
CCAAATTGGCTTATTATTTGTTCGATAATGAAATCTTGGGTGAAAATTAC
GATTTTTTAGGCGTTTTGGAGCGCCGACGAAATCTTGCCGGCAAGAAAGG
AAGACGAGGTGAGGATGATGCTTTACCGCTACAAGAAAAATACAACGGAT
TCGACGACCCAACTCCTCAACAAATCTAAACGTACGTGTCAAAATGATTT
GTCAGACATCGCGTGCTACCAATATGTATCAATGTAGTTTTCGAATATCT
AATGAAAGCTTTTACAAGTTTTCAGGTCTCCTTAATAACCATGTGAAAAA
TGGCCAAGTGACTAGGACTGTATCCGTGATGACCTAGTAAAAGTCTGACT
GGCTTTTAAAAGACAGCTGGATAGACTGAATAATGCAAAATTGAAATAAG
CGTGATGGAGCTCTTTTGAAACAAGACGCTGAAAAGTTATTAGGGCTGTG
TTTagcattttaattattttttgtataatctcaaaagatattttactttg
tatttttaatttGTACTGTGTATTATCTCATTTACATGTAGGCATTCATG
GAAATATGTACGGTACTTCCTAtcaaattttcttcatttttctttggttt
ggtTAACCTCATTTACAGAAAGAAAGTTTTATACTCTTTAGCGCAACAC
Run BLAST on NCBI

protein sequence of TCONS_00053673-protein

>TCONS_00053673-protein ID=TCONS_00053673-protein|Name=TCONS_00053673-protein|organism=Clytia hemisphaerica|type=polypeptide|length=560bp
MADLNVAGLISIIIFYLAILGIGLFAAWRKNKHTKENAQTTQDETNEVIL
AGRTIGMFIGCFTMTATWVGGGYINGTAESVYNDGLVWAQAPWGYATSLA
MGGFFFARKMREAEYITMLDPLQDKYGRVMGAFLYIPAFLGETFWSASIL
AALGATLTVILGLNMNISVIVSACIAVGYTFFGGLYSVAYTDVVQLICIA
VGLWLTVPFSLTNENVESIGARKEEWLGQLYGAKVGKWIDYAFLLICGGI
PWQVYFQRVLSSKSAHRAQILSFVAAFGCIVLAIPAVLIGAAAKSADWGA
VSGAVDANLVTNKTGEWVITDTRLVLPMVLQYLAPGWVSFIGLGAISAAV
MSSADSSVLSASSMFGHNIYKLIIRKNASANEIIWVIRIGIIFVGIMATL
VGLTVDSIYALFHLCSDLVFVILFPQLVGAVHIQDVNTYGSICAYIVGLF
LRITGGEELIGFPATFKYPYYDETYSNGKGSQNFPFRTLAMIISFITLVS
VSKLAYYLFDNEILGENYDFLGVLERRRNLAGKKGRRGEDDALPLQEKYN
GFDDPTPQQI
Run BLAST on NCBI

transcript from alignment at scaffold_233:675583..679808-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053673 ID=TCONS_00053673|Name=TCONS_00053673|organism=Clytia hemisphaerica|type=transcript|length=4226bp|location=Sequence derived from alignment at scaffold_233:675583..679808- (Clytia hemisphaerica)
GGCAGACGAGCTCACAATCTACTCTTTGGTCGTCATGGAAACTGCTCGAA
AGCCGCGCCTCGAAACGCCATAGGAGGTATTTAATCAAGGGAAGACAGGG
TGTATAAAACTCGTACCATATTAATCTGGGAATAACTCAGATAACCTGAA
AATAGCATTTTTCAGCTTTTTCAGTTCATGTCATCGACTACATCAGTTAA
ATCACTAGATTTAGAAAATCTTTGTAAATTTAGTAAATCTTTGTAGTCAG
ACGTAGTTTGTCTAGTGTTTTTATCAATTTATCAATGGAGAAAACAATAG
TTAATTCTAAACAGAGTTTTGGGCAATAAATGTCAATAGGATAAAGCTTT
GTGGAGTGCTCAGATTCCAGACGGTCTAGGAAGATTCATCTGAAGTTATG
CAGTAAAATCTTTATTCAGAGTTGAGAAGAACAGATCCAAAGCATACTAT
TTAATTCTACCTGGTTACAATATTCACTACAATTAAAAAACAAAACCATT
ATTCGCTATCTGCCATCTAAAGAAAGCTCTTGTACTTTCAGGAGAAATTT
AATTGATCATCATGGCTGATTTGAATGTGGCAGGTTTGATCAGTATCATC
ATCTTTTATTTGGCTATCCTTGGCATCGGTTTATTTGCTGCCTGGAGAAA
GAACAAACACACGAAAGAGAATGCGCAAACCACACAAGACGAAACGAATG
AAGTTATTTTAGCTGGAAGAACTATTGGGATGTTTATTGGTTGCTTCACT
ATGACTGGTATGTCGCCTTTCCTTTCGTCTACCGTCACACTGAACAATCT
CTATGGTGACTAAAAATATTTGTGACAGTGTTGTTTCCAAATCAAAATGA
GCGGATGAATTTTGAAACCTTTTCAATATATCACAAAAAAAGGAGTTCTC
AACCTCTGTAGCTTTTTAGACGTCTTTCTTAAGATCTCTTCGATTGCATT
ATGGAGCAAAAAAGCAGGTCCGAAAAGATTCATTCGAGCAGCAATATTCA
GAGCGACAATGGTTATTGCATTATGGATTAAGTGAATTTTCGGAGTGAAT
CTTTATGCTCCATTTTTCTGGTTCATTAGCATTCAAATCTTTGATATATT
TTAGCAACATGGGTTGGTGGTGGTTACATCAATGGAACAGCAGAGTCAGT
GTACAATGATGGTCTGGTCTGGGCTCAAGCACCATGGGGTTATGCTACCA
GTTTAGCGATGGGTACGTATCTTCTAGCCTAGATATCTAAGCCAGATTGA
TTCCGTCACTTGGTAGAATCTGATGGTAAGTTGTGACTGGATATCTGGTA
AACTTAAAATTCCGTACATCATAAAAATCATTAAAGCACCGATAACGCTA
TATTGCGGTCAGCCATATCTTGGCCTTGTAAAAACTGGCTTGATTAACCA
GGCTACCTATCTTCTTCATTGTCTCGTGTAAAGATTTCTTCTCGATACTG
TTTGTGACAAAGGGACATTTCTACAACTTTAACTTGTTTCATAATTTCTT
TCAGGTGGTTTCTTTTTTGCTCGCAAAATGAGAGAAGCGGAATATATCAC
CATGTTGGACCCTCTGCAAGACAAGTACGGTCGTGTGATGGGTGCTTTCC
TTTACATTCCTGCTTTCCTTGGTGAAACATTTTGGTCTGCATCTATCCTG
GCAGCTCTTGGTGCAACATTGACAGTTATCTTGGGGTTGAACATGAATAT
TTCCGTCATCGTGTCGGCGTGTATTGCTGTCGGCTACACCTTTTTTGGTG
GACTTTATTCAGGTATAGGATGAAGCAAATCTTTTACTTATGTATGATGT
GAATGTTGTCACATATTTCATACCAGGACAGTGTCTCGCTATTGTTATAT
TATGCTGATATAAGCAAAAAGTGTTTTGCTTTTCCTCTTTCTGACCAATC
TTTCTACACATTCGTGTCAATCTAATGTGAAAAAGCTTGTGAATTAAAAT
TGATGAGTAAGCAAACGACATCACTCTTATTTAAAAACAAAACCTTTAAA
AGTAAAGTTAAAGTATTCCAGAAATCGAATGGACTTAATATTTTTATTGA
TTTTTCTCCCGCTATCAGTTGCATACACGGACGTCGTTCAATTGATTTGC
ATTGCGGTCGGATTGTGGTTGACGGTTCCTTTCTCTTTGACCAATGAAAA
CGTTGAATCGATTGGTGCACGTAAAGAGGAATGGCTCGGCCAATTGTATG
GTGCTAAAGTCGGAAAATGGATTGATTACGCTTTCTTATTGGTACGGATA
AAGTCTTATTAAAATTCAACTGATATAACTTAACTGACTTCTCTTGCGTT
CGTTTACTTTCAATCCATCCTTAGTCTAGCATGCTAGACGATTAATTCAG
AAAGCAAAAAATTATGAAAAGTGAAAGTTTTAGTTAGAAACTGATATTGT
ACCGTAACAATTATCGCATTATCATATAACACCTCTGTCACTGTATTAGA
TGGATCATAAACGACTGTAGTCTAATCCATCCTTTAAGTTTTTGGAATTG
TTTGTCATACTTTGAAAAGTTGTCTTTTTCTTTCTTAGATTTGTGGAGGT
ATTCCATGGCAAGTGTATTTCCAACGTGTATTGTCTTCCAAGTCAGCTCA
CCGTGCTCAAATTCTCTCCTTCGTTGCTGCTTTCGGCTGTATTGTGCTGG
CTATCCCTGCAGTTCTGATCGGTGCCGCCGCCAAAAGCGCTGGTAAGAAT
CGTTTCTTATATTAGTATATTGGAAGGACTCTTTAGTCGTAACCAAAATA
TCTGTATCGAGAAGACATTAAAGATGATACATCTCTTTACCTTCAGACTG
GGGAGCAGTAAGTGGGGCAGTGGACGCCAACCTTGTGACCAACAAAACCG
GAGAGTGGGTGATCACGGATACCAGACTGGTCCTCCCCATGGTTCTTCAA
TACTTAGCTCCTGGATGGGTGTCTTTCATTGGTCTTGGTGCCATCTCAGC
TGCTGTCATGTCTAGTGCTGACTCGTCAGTTTTGTCTGCTAGTTCCATGT
TCGGACATAATATCTACAAGTTGATCATCAGAAAAAATGTAAGCGAAAAA
GAGCATACCTTTGTCTCATTAACCGGTTCAGCTAAATTCCAACAAAGCTG
GAATGTGGTATATTAAATTAATAAAATTTTGTGCAAACTTTTCTGTTTTT
TTTTTGTCATTTGTACTTCTTACCTTAGATAAACTTTCGAATATTATCTT
TCAGGCCAGTGCCAATGAAATTATTTGGGTGATTCGTATTGGTATCATCT
TTGTTGGTATCATGGCAACGCTGGTTGGGTTGACGGTCGACAGCATCTAC
GCTTTGTTCCATTTGTGCTCGGACCTGGTCTTTGTCATCCTCTTCCCACA
GCTGGTGGGTGCTGTCCACATCCAAGATGTCAACACGTATGGATCCATAT
GTGCTTACATAGTGGGATTGTTCTTACGCATCACCGGTGGAGAAGAATTG
ATCGGGTTCCCGGCTACTTTTAAATATCCTTACTATGACGAGACGTACAG
TAATGGGAAAGGATCACAAAATTTCCCCTTCCGTACCCTAGCTATGATTA
TTTCTTTCATCACGCTCGTCTCTGTTTCCAAATTGGCTTATTATTTGTTC
GATAATGAAATCTTGGGTGAAAATTACGATTTTTTAGGCGTTTTGGAGCG
CCGACGAAATCTTGCCGGCAAGAAAGGAAGACGAGGTGAGGATGATGCTT
TACCGCTACAAGAAAAATACAACGGATTCGACGACCCAACTCCTCAACAA
ATCTAAACGTACGTGTCAAAATGATTTGTCAGACATCGCGTGCTACCAAT
ATGTATCAATGTAGTTTTCGAATATCTAATGAAAGCTTTTACAAGTTTTC
AGGTCTCCTTAATAACCATGTGAAAAATGGCCAAGTGACTAGGACTGTAT
CCGTGATGACCTAGTAAAAGTCTGACTGGCTTTTAAAAGACAGCTGGATA
GACTGAATAATGCAAAATTGAAATAAGCGTGATGGAGCTCTTTTGAAACA
AGACGCTGAAAAGTTATTAGGGCTGTGTTTAGCATTTTAATTATTTTTTG
TATAATCTCAAAAGATATTTTACTTTGTATTTTTAATTTGTACTGTGTAT
TATCTCATTTACATGTAGGCATTCATGGAAATATGTACGGTACTTCCTAT
CAAATTTTCTTCATTTTTCTTTGGTTTGGTTAACCTCATTTACAGAAAGA
AAGTTTTATACTCTTTAGCGCAACAC

Coding sequence (CDS) from alignment at scaffold_233:675583..679808-

>TCONS_00053673 ID=TCONS_00053673|Name=TCONS_00053673|organism=Clytia hemisphaerica|type=CDS|length=11781bp|location=Sequence derived from alignment at scaffold_233:675583..679808- (Clytia hemisphaerica)
GCCAGTGCCAATGAAATTATTTGGGTGATTCGTATTGGTATCATCTTTGT
TGGTATCATGGCAACGCTGGTTGGGTTGACGGTCGACAGCATCTACGCTT
TGTTCCATTTGTGCTCGGACCTGGTCTTTGTCATCCTCTTCCCACAGCTG
GTGGGTGCTGTCCACATCCAAGATGTCAACACGTATGGATCCATATGTGC
TTACATAGTGGGATTGTTCTTACGCATCACCGGTGGAGAAGAATTGATCG
GGTTCCCGGCTACTTTTAAATATCCTTACTATGACGAGACGTACAGTAAT
GGGAAAGGATCACAAAATTTCCCCTTCCGTACCCTAGCTATGATTATTTC
TTTCATCACGCTCGTCTCTGTTTCCAAATTGGCTTATTATTTGTTCGATA
ATGAAATCTTGGGTGAAAATTACGATTTTTTAGGCGTTTTGGAGCGCCGA
CGAAATCTTGCCGGCAAGAAAGGAAGACGAGGTGAGGATGATGCTTTACC
GCTACAAGAAAAATACAACGGATTCGACGACCCAACTCCTCAACAAATCT
AAACTGGGGAGCAGTAAGTGGGGCAGTGGACGCCAACCTTGTGACCAACA
AAACCGGAGAGTGGGTGATCACGGATACCAGACTGGTCCTCCCCATGGTT
CTTCAATACTTAGCTCCTGGATGGGTGTCTTTCATTGGTCTTGGTGCCAT
CTCAGCTGCTGTCATGTCTAGTGCTGACTCGTCAGTTTTGTCTGCTAGTT
CCATGTTCGGACATAATATCTACAAGTTGATCATCAGAAAAAATATTTGT
GGAGGTATTCCATGGCAAGTGTATTTCCAACGTGTATTGTCTTCCAAGTC
AGCTCACCGTGCTCAAATTCTCTCCTTCGTTGCTGCTTTCGGCTGTATTG
TGCTGGCTATCCCTGCAGTTCTGATCGGTGCCGCCGCCAAAAGCGCTGTT
GCATACACGGACGTCGTTCAATTGATTTGCATTGCGGTCGGATTGTGGTT
GACGGTTCCTTTCTCTTTGACCAATGAAAACGTTGAATCGATTGGTGCAC
GTAAAGAGGAATGGCTCGGCCAATTGTATGGTGCTAAAGTCGGAAAATGG
ATTGATTACGCTTTCTTATTGGTGGTTTCTTTTTTGCTCGCAAAATGAGA
GAAGCGGAATATATCACCATGTTGGACCCTCTGCAAGACAAGTACGGTCG
TGTGATGGGTGCTTTCCTTTACATTCCTGCTTTCCTTGGTGAAACATTTT
GGTCTGCATCTATCCTGGCAGCTCTTGGTGCAACATTGACAGTTATCTTG
GGGTTGAACATGAATATTTCCGTCATCGTGTCGGCGTGTATTGCTGTCGG
CTACACCTTTTTTGGTGGACTTTATTCAGCAACATGGGTTGGTGGTGGTT
ACATCAATGGAACAGCAGAGTCAGTGTACAATGATGGTCTGGTCTGGGCT
CAAGCACCATGGGGTTATGCTACCAGTTTAGCGATGGATGGCTGATTTGA
ATGTGGCAGGTTTGATCAGTATCATCATCTTTTATTTGGCTATCCTTGGC
ATCGGTTTATTTGCTGCCTGGAGAAAGAACAAACACACGAAAGAGAATGC
GCAAACCACACAAGACGAAACGAATGAAGTTATTTTAGCTGGAAGAACTA
TTGGGATGTTTATTGGTTGCTTCACTATGACTGGCCAGTGCCAATGAAAT
TATTTGGGTGATTCGTATTGGTATCATCTTTGTTGGTATCATGGCAACGC
TGGTTGGGTTGACGGTCGACAGCATCTACGCTTTGTTCCATTTGTGCTCG
GACCTGGTCTTTGTCATCCTCTTCCCACAGCTGGTGGGTGCTGTCCACAT
CCAAGATGTCAACACGTATGGATCCATATGTGCTTACATAGTGGGATTGT
TCTTACGCATCACCGGTGGAGAAGAATTGATCGGGTTCCCGGCTACTTTT
AAATATCCTTACTATGACGAGACGTACAGTAATGGGAAAGGATCACAAAA
TTTCCCCTTCCGTACCCTAGCTATGATTATTTCTTTCATCACGCTCGTCT
CTGTTTCCAAATTGGCTTATTATTTGTTCGATAATGAAATCTTGGGTGAA
AATTACGATTTTTTAGGCGTTTTGGAGCGCCGACGAAATCTTGCCGGCAA
GAAAGGAAGACGAGGTGAGGATGATGCTTTACCGCTACAAGAAAAATACA
ACGGATTCGACGACCCAACTCCTCAACAAATCTAAACTGGGGAGCAGTAA
GTGGGGCAGTGGACGCCAACCTTGTGACCAACAAAACCGGAGAGTGGGTG
ATCACGGATACCAGACTGGTCCTCCCCATGGTTCTTCAATACTTAGCTCC
TGGATGGGTGTCTTTCATTGGTCTTGGTGCCATCTCAGCTGCTGTCATGT
CTAGTGCTGACTCGTCAGTTTTGTCTGCTAGTTCCATGTTCGGACATAAT
ATCTACAAGTTGATCATCAGAAAAAATATTTGTGGAGGTATTCCATGGCA
AGTGTATTTCCAACGTGTATTGTCTTCCAAGTCAGCTCACCGTGCTCAAA
TTCTCTCCTTCGTTGCTGCTTTCGGCTGTATTGTGCTGGCTATCCCTGCA
GTTCTGATCGGTGCCGCCGCCAAAAGCGCTGTTGCATACACGGACGTCGT
TCAATTGATTTGCATTGCGGTCGGATTGTGGTTGACGGTTCCTTTCTCTT
TGACCAATGAAAACGTTGAATCGATTGGTGCACGTAAAGAGGAATGGCTC
GGCCAATTGTATGGTGCTAAAGTCGGAAAATGGATTGATTACGCTTTCTT
ATTGGTGGTTTCTTTTTTGCTCGCAAAATGAGAGAAGCGGAATATATCAC
CATGTTGGACCCTCTGCAAGACAAGTACGGTCGTGTGATGGGTGCTTTCC
TTTACATTCCTGCTTTCCTTGGTGAAACATTTTGGTCTGCATCTATCCTG
GCAGCTCTTGGTGCAACATTGACAGTTATCTTGGGGTTGAACATGAATAT
TTCCGTCATCGTGTCGGCGTGTATTGCTGTCGGCTACACCTTTTTTGGTG
GACTTTATTCAGCAACATGGGTTGGTGGTGGTTACATCAATGGAACAGCA
GAGTCAGTGTACAATGATGGTCTGGTCTGGGCTCAAGCACCATGGGGTTA
TGCTACCAGTTTAGCGATGGATGGCTGATTTGAATGTGGCAGGTTTGATC
AGTATCATCATCTTTTATTTGGCTATCCTTGGCATCGGTTTATTTGCTGC
CTGGAGAAAGAACAAACACACGAAAGAGAATGCGCAAACCACACAAGACG
AAACGAATGAAGTTATTTTAGCTGGAAGAACTATTGGGATGTTTATTGGT
TGCTTCACTATGACTGGCCAGTGCCAATGAAATTATTTGGGTGATTCGTA
TTGGTATCATCTTTGTTGGTATCATGGCAACGCTGGTTGGGTTGACGGTC
GACAGCATCTACGCTTTGTTCCATTTGTGCTCGGACCTGGTCTTTGTCAT
CCTCTTCCCACAGCTGGTGGGTGCTGTCCACATCCAAGATGTCAACACGT
ATGGATCCATATGTGCTTACATAGTGGGATTGTTCTTACGCATCACCGGT
GGAGAAGAATTGATCGGGTTCCCGGCTACTTTTAAATATCCTTACTATGA
CGAGACGTACAGTAATGGGAAAGGATCACAAAATTTCCCCTTCCGTACCC
TAGCTATGATTATTTCTTTCATCACGCTCGTCTCTGTTTCCAAATTGGCT
TATTATTTGTTCGATAATGAAATCTTGGGTGAAAATTACGATTTTTTAGG
CGTTTTGGAGCGCCGACGAAATCTTGCCGGCAAGAAAGGAAGACGAGGTG
AGGATGATGCTTTACCGCTACAAGAAAAATACAACGGATTCGACGACCCA
ACTCCTCAACAAATCTAAACTGGGGAGCAGTAAGTGGGGCAGTGGACGCC
AACCTTGTGACCAACAAAACCGGAGAGTGGGTGATCACGGATACCAGACT
GGTCCTCCCCATGGTTCTTCAATACTTAGCTCCTGGATGGGTGTCTTTCA
TTGGTCTTGGTGCCATCTCAGCTGCTGTCATGTCTAGTGCTGACTCGTCA
GTTTTGTCTGCTAGTTCCATGTTCGGACATAATATCTACAAGTTGATCAT
CAGAAAAAATATTTGTGGAGGTATTCCATGGCAAGTGTATTTCCAACGTG
TATTGTCTTCCAAGTCAGCTCACCGTGCTCAAATTCTCTCCTTCGTTGCT
GCTTTCGGCTGTATTGTGCTGGCTATCCCTGCAGTTCTGATCGGTGCCGC
CGCCAAAAGCGCTGTTGCATACACGGACGTCGTTCAATTGATTTGCATTG
CGGTCGGATTGTGGTTGACGGTTCCTTTCTCTTTGACCAATGAAAACGTT
GAATCGATTGGTGCACGTAAAGAGGAATGGCTCGGCCAATTGTATGGTGC
TAAAGTCGGAAAATGGATTGATTACGCTTTCTTATTGGTGGTTTCTTTTT
TGCTCGCAAAATGAGAGAAGCGGAATATATCACCATGTTGGACCCTCTGC
AAGACAAGTACGGTCGTGTGATGGGTGCTTTCCTTTACATTCCTGCTTTC
CTTGGTGAAACATTTTGGTCTGCATCTATCCTGGCAGCTCTTGGTGCAAC
ATTGACAGTTATCTTGGGGTTGAACATGAATATTTCCGTCATCGTGTCGG
CGTGTATTGCTGTCGGCTACACCTTTTTTGGTGGACTTTATTCAGCAACA
TGGGTTGGTGGTGGTTACATCAATGGAACAGCAGAGTCAGTGTACAATGA
TGGTCTGGTCTGGGCTCAAGCACCATGGGGTTATGCTACCAGTTTAGCGA
TGGATGGCTGATTTGAATGTGGCAGGTTTGATCAGTATCATCATCTTTTA
TTTGGCTATCCTTGGCATCGGTTTATTTGCTGCCTGGAGAAAGAACAAAC
ACACGAAAGAGAATGCGCAAACCACACAAGACGAAACGAATGAAGTTATT
TTAGCTGGAAGAACTATTGGGATGTTTATTGGTTGCTTCACTATGACTGG
CCAGTGCCAATGAAATTATTTGGGTGATTCGTATTGGTATCATCTTTGTT
GGTATCATGGCAACGCTGGTTGGGTTGACGGTCGACAGCATCTACGCTTT
GTTCCATTTGTGCTCGGACCTGGTCTTTGTCATCCTCTTCCCACAGCTGG
TGGGTGCTGTCCACATCCAAGATGTCAACACGTATGGATCCATATGTGCT
TACATAGTGGGATTGTTCTTACGCATCACCGGTGGAGAAGAATTGATCGG
GTTCCCGGCTACTTTTAAATATCCTTACTATGACGAGACGTACAGTAATG
GGAAAGGATCACAAAATTTCCCCTTCCGTACCCTAGCTATGATTATTTCT
TTCATCACGCTCGTCTCTGTTTCCAAATTGGCTTATTATTTGTTCGATAA
TGAAATCTTGGGTGAAAATTACGATTTTTTAGGCGTTTTGGAGCGCCGAC
GAAATCTTGCCGGCAAGAAAGGAAGACGAGGTGAGGATGATGCTTTACCG
CTACAAGAAAAATACAACGGATTCGACGACCCAACTCCTCAACAAATCTA
AACTGGGGAGCAGTAAGTGGGGCAGTGGACGCCAACCTTGTGACCAACAA
AACCGGAGAGTGGGTGATCACGGATACCAGACTGGTCCTCCCCATGGTTC
TTCAATACTTAGCTCCTGGATGGGTGTCTTTCATTGGTCTTGGTGCCATC
TCAGCTGCTGTCATGTCTAGTGCTGACTCGTCAGTTTTGTCTGCTAGTTC
CATGTTCGGACATAATATCTACAAGTTGATCATCAGAAAAAATATTTGTG
GAGGTATTCCATGGCAAGTGTATTTCCAACGTGTATTGTCTTCCAAGTCA
GCTCACCGTGCTCAAATTCTCTCCTTCGTTGCTGCTTTCGGCTGTATTGT
GCTGGCTATCCCTGCAGTTCTGATCGGTGCCGCCGCCAAAAGCGCTGTTG
CATACACGGACGTCGTTCAATTGATTTGCATTGCGGTCGGATTGTGGTTG
ACGGTTCCTTTCTCTTTGACCAATGAAAACGTTGAATCGATTGGTGCACG
TAAAGAGGAATGGCTCGGCCAATTGTATGGTGCTAAAGTCGGAAAATGGA
TTGATTACGCTTTCTTATTGGTGGTTTCTTTTTTGCTCGCAAAATGAGAG
AAGCGGAATATATCACCATGTTGGACCCTCTGCAAGACAAGTACGGTCGT
GTGATGGGTGCTTTCCTTTACATTCCTGCTTTCCTTGGTGAAACATTTTG
GTCTGCATCTATCCTGGCAGCTCTTGGTGCAACATTGACAGTTATCTTGG
GGTTGAACATGAATATTTCCGTCATCGTGTCGGCGTGTATTGCTGTCGGC
TACACCTTTTTTGGTGGACTTTATTCAGCAACATGGGTTGGTGGTGGTTA
CATCAATGGAACAGCAGAGTCAGTGTACAATGATGGTCTGGTCTGGGCTC
AAGCACCATGGGGTTATGCTACCAGTTTAGCGATGGATGGCTGATTTGAA
TGTGGCAGGTTTGATCAGTATCATCATCTTTTATTTGGCTATCCTTGGCA
TCGGTTTATTTGCTGCCTGGAGAAAGAACAAACACACGAAAGAGAATGCG
CAAACCACACAAGACGAAACGAATGAAGTTATTTTAGCTGGAAGAACTAT
TGGGATGTTTATTGGTTGCTTCACTATGACTGGCCAGTGCCAATGAAATT
ATTTGGGTGATTCGTATTGGTATCATCTTTGTTGGTATCATGGCAACGCT
GGTTGGGTTGACGGTCGACAGCATCTACGCTTTGTTCCATTTGTGCTCGG
ACCTGGTCTTTGTCATCCTCTTCCCACAGCTGGTGGGTGCTGTCCACATC
CAAGATGTCAACACGTATGGATCCATATGTGCTTACATAGTGGGATTGTT
CTTACGCATCACCGGTGGAGAAGAATTGATCGGGTTCCCGGCTACTTTTA
AATATCCTTACTATGACGAGACGTACAGTAATGGGAAAGGATCACAAAAT
TTCCCCTTCCGTACCCTAGCTATGATTATTTCTTTCATCACGCTCGTCTC
TGTTTCCAAATTGGCTTATTATTTGTTCGATAATGAAATCTTGGGTGAAA
ATTACGATTTTTTAGGCGTTTTGGAGCGCCGACGAAATCTTGCCGGCAAG
AAAGGAAGACGAGGTGAGGATGATGCTTTACCGCTACAAGAAAAATACAA
CGGATTCGACGACCCAACTCCTCAACAAATCTAAACTGGGGAGCAGTAAG
TGGGGCAGTGGACGCCAACCTTGTGACCAACAAAACCGGAGAGTGGGTGA
TCACGGATACCAGACTGGTCCTCCCCATGGTTCTTCAATACTTAGCTCCT
GGATGGGTGTCTTTCATTGGTCTTGGTGCCATCTCAGCTGCTGTCATGTC
TAGTGCTGACTCGTCAGTTTTGTCTGCTAGTTCCATGTTCGGACATAATA
TCTACAAGTTGATCATCAGAAAAAATATTTGTGGAGGTATTCCATGGCAA
GTGTATTTCCAACGTGTATTGTCTTCCAAGTCAGCTCACCGTGCTCAAAT
TCTCTCCTTCGTTGCTGCTTTCGGCTGTATTGTGCTGGCTATCCCTGCAG
TTCTGATCGGTGCCGCCGCCAAAAGCGCTGTTGCATACACGGACGTCGTT
CAATTGATTTGCATTGCGGTCGGATTGTGGTTGACGGTTCCTTTCTCTTT
GACCAATGAAAACGTTGAATCGATTGGTGCACGTAAAGAGGAATGGCTCG
GCCAATTGTATGGTGCTAAAGTCGGAAAATGGATTGATTACGCTTTCTTA
TTGGTGGTTTCTTTTTTGCTCGCAAAATGAGAGAAGCGGAATATATCACC
ATGTTGGACCCTCTGCAAGACAAGTACGGTCGTGTGATGGGTGCTTTCCT
TTACATTCCTGCTTTCCTTGGTGAAACATTTTGGTCTGCATCTATCCTGG
CAGCTCTTGGTGCAACATTGACAGTTATCTTGGGGTTGAACATGAATATT
TCCGTCATCGTGTCGGCGTGTATTGCTGTCGGCTACACCTTTTTTGGTGG
ACTTTATTCAGCAACATGGGTTGGTGGTGGTTACATCAATGGAACAGCAG
AGTCAGTGTACAATGATGGTCTGGTCTGGGCTCAAGCACCATGGGGTTAT
GCTACCAGTTTAGCGATGGATGGCTGATTTGAATGTGGCAGGTTTGATCA
GTATCATCATCTTTTATTTGGCTATCCTTGGCATCGGTTTATTTGCTGCC
TGGAGAAAGAACAAACACACGAAAGAGAATGCGCAAACCACACAAGACGA
AACGAATGAAGTTATTTTAGCTGGAAGAACTATTGGGATGTTTATTGGTT
GCTTCACTATGACTGGCCAGTGCCAATGAAATTATTTGGGTGATTCGTAT
TGGTATCATCTTTGTTGGTATCATGGCAACGCTGGTTGGGTTGACGGTCG
ACAGCATCTACGCTTTGTTCCATTTGTGCTCGGACCTGGTCTTTGTCATC
CTCTTCCCACAGCTGGTGGGTGCTGTCCACATCCAAGATGTCAACACGTA
TGGATCCATATGTGCTTACATAGTGGGATTGTTCTTACGCATCACCGGTG
GAGAAGAATTGATCGGGTTCCCGGCTACTTTTAAATATCCTTACTATGAC
GAGACGTACAGTAATGGGAAAGGATCACAAAATTTCCCCTTCCGTACCCT
AGCTATGATTATTTCTTTCATCACGCTCGTCTCTGTTTCCAAATTGGCTT
ATTATTTGTTCGATAATGAAATCTTGGGTGAAAATTACGATTTTTTAGGC
GTTTTGGAGCGCCGACGAAATCTTGCCGGCAAGAAAGGAAGACGAGGTGA
GGATGATGCTTTACCGCTACAAGAAAAATACAACGGATTCGACGACCCAA
CTCCTCAACAAATCTAAACTGGGGAGCAGTAAGTGGGGCAGTGGACGCCA
ACCTTGTGACCAACAAAACCGGAGAGTGGGTGATCACGGATACCAGACTG
GTCCTCCCCATGGTTCTTCAATACTTAGCTCCTGGATGGGTGTCTTTCAT
TGGTCTTGGTGCCATCTCAGCTGCTGTCATGTCTAGTGCTGACTCGTCAG
TTTTGTCTGCTAGTTCCATGTTCGGACATAATATCTACAAGTTGATCATC
AGAAAAAATATTTGTGGAGGTATTCCATGGCAAGTGTATTTCCAACGTGT
ATTGTCTTCCAAGTCAGCTCACCGTGCTCAAATTCTCTCCTTCGTTGCTG
CTTTCGGCTGTATTGTGCTGGCTATCCCTGCAGTTCTGATCGGTGCCGCC
GCCAAAAGCGCTGTTGCATACACGGACGTCGTTCAATTGATTTGCATTGC
GGTCGGATTGTGGTTGACGGTTCCTTTCTCTTTGACCAATGAAAACGTTG
AATCGATTGGTGCACGTAAAGAGGAATGGCTCGGCCAATTGTATGGTGCT
AAAGTCGGAAAATGGATTGATTACGCTTTCTTATTGGTGGTTTCTTTTTT
GCTCGCAAAATGAGAGAAGCGGAATATATCACCATGTTGGACCCTCTGCA
AGACAAGTACGGTCGTGTGATGGGTGCTTTCCTTTACATTCCTGCTTTCC
TTGGTGAAACATTTTGGTCTGCATCTATCCTGGCAGCTCTTGGTGCAACA
TTGACAGTTATCTTGGGGTTGAACATGAATATTTCCGTCATCGTGTCGGC
GTGTATTGCTGTCGGCTACACCTTTTTTGGTGGACTTTATTCAGCAACAT
GGGTTGGTGGTGGTTACATCAATGGAACAGCAGAGTCAGTGTACAATGAT
GGTCTGGTCTGGGCTCAAGCACCATGGGGTTATGCTACCAGTTTAGCGAT
GGATGGCTGATTTGAATGTGGCAGGTTTGATCAGTATCATCATCTTTTAT
TTGGCTATCCTTGGCATCGGTTTATTTGCTGCCTGGAGAAAGAACAAACA
CACGAAAGAGAATGCGCAAACCACACAAGACGAAACGAATGAAGTTATTT
TAGCTGGAAGAACTATTGGGATGTTTATTGGTTGCTTCACTATGACTGGC
CAGTGCCAATGAAATTATTTGGGTGATTCGTATTGGTATCATCTTTGTTG
GTATCATGGCAACGCTGGTTGGGTTGACGGTCGACAGCATCTACGCTTTG
TTCCATTTGTGCTCGGACCTGGTCTTTGTCATCCTCTTCCCACAGCTGGT
GGGTGCTGTCCACATCCAAGATGTCAACACGTATGGATCCATATGTGCTT
ACATAGTGGGATTGTTCTTACGCATCACCGGTGGAGAAGAATTGATCGGG
TTCCCGGCTACTTTTAAATATCCTTACTATGACGAGACGTACAGTAATGG
GAAAGGATCACAAAATTTCCCCTTCCGTACCCTAGCTATGATTATTTCTT
TCATCACGCTCGTCTCTGTTTCCAAATTGGCTTATTATTTGTTCGATAAT
GAAATCTTGGGTGAAAATTACGATTTTTTAGGCGTTTTGGAGCGCCGACG
AAATCTTGCCGGCAAGAAAGGAAGACGAGGTGAGGATGATGCTTTACCGC
TACAAGAAAAATACAACGGATTCGACGACCCAACTCCTCAACAAATCTAA
ACTGGGGAGCAGTAAGTGGGGCAGTGGACGCCAACCTTGTGACCAACAAA
ACCGGAGAGTGGGTGATCACGGATACCAGACTGGTCCTCCCCATGGTTCT
TCAATACTTAGCTCCTGGATGGGTGTCTTTCATTGGTCTTGGTGCCATCT
CAGCTGCTGTCATGTCTAGTGCTGACTCGTCAGTTTTGTCTGCTAGTTCC
ATGTTCGGACATAATATCTACAAGTTGATCATCAGAAAAAATATTTGTGG
AGGTATTCCATGGCAAGTGTATTTCCAACGTGTATTGTCTTCCAAGTCAG
CTCACCGTGCTCAAATTCTCTCCTTCGTTGCTGCTTTCGGCTGTATTGTG
CTGGCTATCCCTGCAGTTCTGATCGGTGCCGCCGCCAAAAGCGCTGTTGC
ATACACGGACGTCGTTCAATTGATTTGCATTGCGGTCGGATTGTGGTTGA
CGGTTCCTTTCTCTTTGACCAATGAAAACGTTGAATCGATTGGTGCACGT
AAAGAGGAATGGCTCGGCCAATTGTATGGTGCTAAAGTCGGAAAATGGAT
TGATTACGCTTTCTTATTGGTGGTTTCTTTTTTGCTCGCAAAATGAGAGA
AGCGGAATATATCACCATGTTGGACCCTCTGCAAGACAAGTACGGTCGTG
TGATGGGTGCTTTCCTTTACATTCCTGCTTTCCTTGGTGAAACATTTTGG
TCTGCATCTATCCTGGCAGCTCTTGGTGCAACATTGACAGTTATCTTGGG
GTTGAACATGAATATTTCCGTCATCGTGTCGGCGTGTATTGCTGTCGGCT
ACACCTTTTTTGGTGGACTTTATTCAGCAACATGGGTTGGTGGTGGTTAC
ATCAATGGAACAGCAGAGTCAGTGTACAATGATGGTCTGGTCTGGGCTCA
AGCACCATGGGGTTATGCTACCAGTTTAGCGATGGATGGCTGATTTGAAT
GTGGCAGGTTTGATCAGTATCATCATCTTTTATTTGGCTATCCTTGGCAT
CGGTTTATTTGCTGCCTGGAGAAAGAACAAACACACGAAAGAGAATGCGC
AAACCACACAAGACGAAACGAATGAAGTTATTTTAGCTGGAAGAACTATT
GGGATGTTTATTGGTTGCTTCACTATGACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033853XLOC_033853Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053673-proteinTCONS_00053673-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053673-exon-scaffold_233-1575043694:679733..679808TCONS_00053673-exon-scaffold_233-1575043694:679733..679808Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1575043694:679052..679267TCONS_00053673-exon-scaffold_233-1575043694:679052..679267Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1575043694:678597..678704TCONS_00053673-exon-scaffold_233-1575043694:678597..678704Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1575043694:678047..678304TCONS_00053673-exon-scaffold_233-1575043694:678047..678304Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1575043694:677568..677740TCONS_00053673-exon-scaffold_233-1575043694:677568..677740Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1575043694:677117..677270TCONS_00053673-exon-scaffold_233-1575043694:677117..677270Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1575043694:676771..677012TCONS_00053673-exon-scaffold_233-1575043694:676771..677012Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1575043694:675583..676604TCONS_00053673-exon-scaffold_233-1575043694:675583..676604Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:679733..679808TCONS_00053673-exon-scaffold_233-1510915933:679733..679808Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:679052..679267TCONS_00053673-exon-scaffold_233-1510915933:679052..679267Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:678597..678704TCONS_00053673-exon-scaffold_233-1510915933:678597..678704Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:678047..678304TCONS_00053673-exon-scaffold_233-1510915933:678047..678304Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:677568..677740TCONS_00053673-exon-scaffold_233-1510915933:677568..677740Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:677117..677270TCONS_00053673-exon-scaffold_233-1510915933:677117..677270Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:676771..677012TCONS_00053673-exon-scaffold_233-1510915933:676771..677012Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1510915933:675583..676604TCONS_00053673-exon-scaffold_233-1510915933:675583..676604Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:679733..679808TCONS_00053673-exon-scaffold_233-1491911889:679733..679808Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:679052..679267TCONS_00053673-exon-scaffold_233-1491911889:679052..679267Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:678597..678704TCONS_00053673-exon-scaffold_233-1491911889:678597..678704Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:678047..678304TCONS_00053673-exon-scaffold_233-1491911889:678047..678304Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:677568..677740TCONS_00053673-exon-scaffold_233-1491911889:677568..677740Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:677117..677270TCONS_00053673-exon-scaffold_233-1491911889:677117..677270Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:676771..677012TCONS_00053673-exon-scaffold_233-1491911889:676771..677012Clytia hemisphaericaexon
TCONS_00053673-exon-scaffold_233-1491911889:675583..676604TCONS_00053673-exon-scaffold_233-1491911889:675583..676604Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:675583..679808 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
68.168	75.4693	94.1611	142.671	120.621	98.968	91.4559	105.603	17.9004	34.9866	9.79435	27.3419	54.6685	76.9422	7.83048	6.51587	26.9225	22.2695	19.3835	33.7324	29.4109	19.1915	22.3183	28.0165	112.499	87.3538	19.0593	14.7523	11.2689	17.0666
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001734Na/solute_symporter
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Blast
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BLAST of TCONS_00053673 vs. Swiss-Prot (Human)
Match: SC5A7 (High affinity choline transporter 1 OS=Homo sapiens GN=SLC5A7 PE=1 SV=1)

HSP 1 Score: 485.337 bits (1248), Expect = 4.102e-162
Identity = 284/553 (51.36%), Postives = 380/553 (68.72%), Query Frame = 1 
Query:  109 NVAGLISIIIFYLAILGIGLFAAWRKNKHTKENAQTTQDETNEVILAGRTIGMFIGCFTMTATWVGGGYINGTAESVYNDG--LVWAQAPWGYATSLAMGGFFFARKMREAEYITMLDPLQDKYGRVMGAFLYIPAFLGETFWSASILAALGATLTVILGLNMNISVIVSACIAVGYTFFGGLYSVAYTDVVQLICIAVGLWLTVPFSLTNENVESIG------ARKEEWLGQLYGAKVGKWIDYAFLLICGGIPWQVYFQRVLSSKSAHRAQILSFVAAFGCIVLAIPAVLIGAAAKSADWGAVSGAVDANLVTNKTGEWVITDTRLVLPMVLQYLAPGWVSFIGLGXXXXXXXXXXXXXXXXXXXMFGHNIYKLIIRKNASANEXXXXXXXXXXXXXXMATLVGLTVDSIYALFHLCSDLVFVILFPQLVGAVHIQDVNTYGSICAYIVGLFLRITGGEELIGFPATFKYP-YYDETYSNGKGSQNFPFRTLAMIISFITLVSVSKLAYYLFDNEILGENYD-FLGVLERRRNLAGKKGRRGEDDALPLQE 1737
            +V GLI+II+FYL IL +G++AAWR      +N+ + ++ +  +I+ GR IG+ +G FTMTATWVGGGYINGTAE+VY  G  L WAQAP GY+ SL +GG FFA+ MR   Y+TMLDP Q  YG+ MG  L+IPA +GE FW+A+I +ALGAT++VI+ ++M+ISVI+SA IA  YT  GGLYSVAYTDVVQL CI VGLW++VPF+L++  V  IG        ++ WLG +  ++V  W+D   LL+ GGIPWQ YFQRVLSS SA  AQ+LSF+AAFGC+V+AIPA+LIGA   S DW   +      L   KT E    +  ++LP+VLQYL P ++SF GLGA+SAAVMSSADSS+LSASSMF  NIY+L  R+NAS  EI+WV+RI +   G  AT + L   ++Y L++L SDLV++++FPQL+  + ++  NTYG++  Y+ GLFLRITGGE  +       YP YY +   NG  +Q FPF+TLAM+ SF+T + +S LA YLF++  L    D F  V+ R       K    +++ + L E
Sbjct:    4 HVEGLIAIIVFYLLILLVGIWAAWRT-----KNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDMHISVIISALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWISVPFALSHPAVADIGFTAVHAKYQKPWLGTVDSSEVYSWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMAIPAILIGAIGASTDWNQTA----YGLPDPKTTE----EADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIVIFPQLLCVLFVKGTNTYGAVAGYVSGLFLRITGGEPYLYLQPLIFYPGYYPD--DNGIYNQKFPFKTLAMVTSFLTNICISYLAKYLFESGTLPPKLDVFDAVVARHSEENMDKTILVKNENIKLDE 541
The following BLAST results are available for this feature:
BLAST of TCONS_00053673 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SC5A74.102e-16251.36High affinity choline transporter 1 OS=Homo sapien... [more]
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