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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053678 ID=TCONS_00053678|Name=TCONS_00053678|organism=Clytia hemisphaerica|type=transcript|length=4174bp
cgaaagtgaacaGTCCAGtccagaaaattaaaaatggcgtcaaaattttt
tttgttaaaaatacgGTTCAGAACAGAAAACAAAACGTCTTAAGTGTCAG
TAATTACTTAAGATATTTTGTAATCAGATTGAAATAATTAGCGATTATAT
ACCTGCAAACATTAAAGGCTGTGTATTCACTGGATTGGAGTCCGAAATGA
CACGGAAAACAGATTATGCAAGCATTCAAGACACCACATGTTGTAAAATC
GAAGACCTCGTCGAAGACAACATCACCACTTGTTATGGTTACAAACGGAA
TTGTGGCAAGACATTTCTTTATATACTAGGAGTCATCCTAACCGCTGGAT
TCCTATGGTTGGTCACTTACTGGAAACCTGACTGGAAATTATACCTGACT
CATTCGAAATGTTCGTTATCGATTGCTCAACGTGTCTTGTTGGTTGATCA
GTTTAGTACGATTTTCGTGGAACCCGTTTTCTCAAGACAATTTCCGAAAG
AGGCTTTACCTTTCCGATCGAACTCCACAAGTAACTTCAGCGATACACAA
AACAAGACATACACTTATTTCATGTACCGACGTTTGAAATATTACTTCGA
CGAGTTTTCAGAAAGGTATAAAGAAGCGGAAAGTGTGGACGATAACGCAT
CCATTCACGAATTGTACCAGTTCAATTCTTCCAAAAATGAAATACCAAAT
AGACAGGCTTTGATCAAATGGTTTGGACCTAATATCATTGACATCAAAGT
CACACCATACATCACATTATTCTTTCAAGAGTGTGCCGACCCCTTTTACA
TCTTCCAAGCTCTAAGCTGTTTGTTGTGGTTCATGGACGATTACTATTAT
TACGCTTCTGCAATCGTCTTCATCTCGCTTACTTCGATCATCATAAGTAT
GTATCAAACACGACAGCATTTGGTCACCCTTCATAACATGATCTCCAAAT
CCTCAGAGGTGACGGTGCTAGACGCCAACGGGCAAGAGATATCCATTCAT
TCCAAAGACTTGGTACCGGGAGATATTTTAGTCATTCCGAAAGAGGGGTG
TATGCTTTTATGTGATGCTACCTTGATCAGTGGCACTGCCATTGTGAATG
AAAGTATGCTGACAGGGGAAAGTGTCCCTGTAACTAAAACATCATTGAAC
AAACCTCTCTCCAAAGAAGAAAGTCCTATCTACAATTCATTACGGTTTAA
AAGAAACACTTTGTTTTGCGGGACACAAGTTTTGCAAACGAGATATTTTG
GCAATGAAAAGGTTTTAGCAGTGGTCGTCAAAACTGGTTTCACTACCATG
AAGGGAGGTTTGATAAGATCTATTTTGTATCCAAAACCCGTTGATTTTAA
ATTCATCTCTGACGCTATGAAGTTTGTAGGAGTACTAGCCTCCTTTGCTG
CAGTGGGACTTATATATACTTTAGTTATTTTTTATTACCATGGGGCGACA
GTAGGACAGATGTTCAAGAAAGCGTTAGATGTGATTACAATTGCGGTACC
ACCCGCACTGCCGGCTGCAATGAGTGTTGGAACAGTCTATGCGTTACATC
GTCTCAAAAAGAAAGACATTTTCTGTATCAGTCCATCGCGAATCAATATC
AGTGGacatttgaatttattttgctTTGATAAAACAGGAACTTTGACAGA
GGATGGTTTAGACTTTTGCGGGATTATTCCGGTGTGTGGCAACGACTTTA
ACCGTTTACAAGAATCAGTATCTCACGATTCACAAGATAAGTTTACTATA
GGAATGGCATGTTGTCATTCGTTGACTATTATCGATGGTCATATTACTGG
CGATCCTTTGGACTTGAAAATGTTTGAAGCAACAGTGTGGGATTTAGAAG
AGTCCGGGGGAGTGGAGACGGAACGGTATGGGAGTATGGTACCGACCATC
GTTCGTCCGAAACTGTCAGCCGTCGATTCTGTTCGTATGAAATATTTAGA
TGACAAATCAttacctttggaagtagccatCTTAAAGCAGTTCACCTTTA
GTTCCGAGCTTCAACGCATGAGTGTGGTTGTTCGTAAGTTGGGAGCACCA
AACATGGAAATCTACGCCAAAGGCTCACCTGAAATGATCGCCTCGTTAAG
TACAAAAGAATCACTCCCTGACAACTTCGAAGAATGCTTAATGACTTACA
CAAGGCAAGGGTATCGCGTCCTTGCACTAGCACATAAATCACTTCCCAAG
TCAGTTCATTGGCATAAAATTCAACATTACGTACGTGGACAAGCAGAATC
AGATTTAACTTTCCTTGGCTTCATCGTTATGAAGAATCTTTTAAAACCTG
TCACCACAAGTGTCATCAATCAATTGGAAACGGCCAACATTCGAACTGTC
ATGGTCACTGGAGACAATGTTTTAACAGCTGTCAGTGTGGCCAGGGAATG
TAACATGGTCAGAGCACACGAGAAGATCGTCTCCATAACACAGGGTGATG
GGAATAAGCTTCAATACAATATTGTCGGTGAACTAGATGCCCTTGAGGAG
GAAGAAAAGAACAAACCTATCCtattcgaaaaattgaaatccgatttcga
aaaatattcaGGAACAGACTACCATTTTGCAGTGACTGGGAAAGTGTTCG
CGCATATCTATGATGAAGAGCCAGTACTCTTCGAACGTCTTCTGGTTCGT
GGCACAATCTTTGCCAGAATGCTACCTGATCAGAAAACATTACTTGTTGA
TAGTCTACAAAGCCTTGGTTACAGTGTCGgCATGTGTGGTGATGGAGCGA
ACGATTGTGGTGCATTGAAACGAGCGAACGCTGGAATTTCTCTCTCCGAA
ACGGAAGCATCAGTCGCATCTCCTTTCAcgtcaaaaacaccaaacattAG
TTGTGTGGTGGACGTCATTAAGGAAGGGCGGTGCGCCCTCGTCACTTCTT
TCAATATCTTCAAATACATGGCGTTGTACAGTATGATACAGTACACTTCC
GTTCTCATCATGTATTGGGTGGGAGTCAATATGGGCGATTTTCAGTACCT
CTACATTGACCTCTTCACAATTATGCCGTTCGCTATCACCATGAGTCGTA
CGGAACCCAGCGGTGTGTTAGTGGCTTTGCGTCCACTTGGAAGGCTCGTT
CATCCATACGTTCTTTTTTCGATCGTCATTCAAATTGCCATTCAAACCTC
ATTTCAAGTCGCTTCTTATTTCTTCGTTCAAACCTTACCTTATTATCAGC
CAATGAGTGTTTTTAAGAATCAGACACACGATTCAGACGGTTATCTTCTG
GCGTACGAAAACACTATTTTGTTCACGTTGACGTGTTATCAATATATCTT
CGTTGCGCTCGTTTTCTCCGTCGGTAAACCATTCCGTAAGCCCTTCTATA
CCAACATCCTGTTGTTGTTGTCTGGTTTAGTGTTGTTGGGCTTCACCACC
TTCCTTGCAACTGGCCCACCCAAAGAAGTTCGAGATTTATTTAGTCTTCT
ACAGATGAAACCGGAAGGCTCTTATTATTACGTATTCTTTGGTTTGGTAG
CTGGTAATTTGTTGGTGTCTGTTTTTGTGGAATATGTTCTCATGGAAACT
GACATCATGAAAGATTTGTTAAACTATGAAGATAAGAAACAGTTAACAAA
GTACcaacaaattcaaaaggaaatttttcaTGATGATACTTGGTACAAAA
GTTTGGGCGTTTGACATAAACTTCGTACTGATAGattttttgaattcaaa
atagCGAGCCCCGACCCCCCCTCCCGTCAGGTGGCAAATATCGAAGCAGA
AACACAGTCTacaatacatttttttaaatctaaaccCGTCCTTTTGAGGG
GATCGCGTTAAGCCTATGAAAGTTTATTCAGGACGAAAATTACTGATTTG
ATTGTATTGAAAGAGActatgaattttttaaattattttttgtaatatGA
GAACTATCGACTTTGAATATactattttgttgtttagatttgtgattttt
ctacAATTATGAGCTCATTCTAGAGCAATAATGTATTTTTTAGATTATCT
TCTATATCGTAGTAATGGGGTTTCTTTTACCGAATCATCCTAAACGAGTT
TCCTTATTGTGACTGATTCTACTGATGCTTGAattcttgaatttgaaaag
attcctttgaATGTATCAAGCTTTTGAAGCAATTTTCTAATTGATTTTCA
CATTTGAAGAATGAAATATCATCA Run BLAST on NCBI transcript from alignment at scaffold_233:694095..706829- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053678 ID=TCONS_00053678|Name=TCONS_00053678|organism=Clytia hemisphaerica|type=transcript|length=12735bp|location=Sequence derived from alignment at scaffold_233:694095..706829- (Clytia hemisphaerica)
CGAAAGTGAACAGTCCAGTCCAGAAAATTAAAAATGGCGTCAAAATTTTT
TTTGTTAAAAATACGGTTCAGAACAGAAAACAAAACGTCTTAAGTGTCAG
TAATTACTTAAGATATTTTGTAATCAGATTGAAATAATTAGCGATTATAT
ACCTGCAAACATTAAAGGCTGTGTATTCACTGGGTATGTATATAAGTTTA
TTTACTTCAAATTATAAAATCTTGATGATTTTTTAGAGACTTCTTGCTTC
TTCTTGTATTGTTTGCTCTTTTATACCCTTCAGCAACTTGTTTCAGCTCC
TTCTTGTTAGTTGCTTGGTCTAATCTCTACAAGCTGTTCCGACTGAATCA
CATATTGGTCTGTCTCCCCTGTCTTTTTTTTATGCAAGAAATATGTTTTG
AGCCAGTTAAAAGTTCCATGCATTTGCCATCCAATACAATACAGTCAGGA
ATAGTCGCCTTATTAGGAGACGCCTCCTGATTAGGAGACNAGCAAAAATC
CTTGCCTGAAATCGAAAGTCCATGAGTTGTTTATTTTTTTCTATGGGAAC
TCATGTTAGAGTCCAGGCCAGCGTCTAAATTCAAGACCGTTCAAGGACCA
TTTTTCGAATTTTTTTCTTTGAAATATCAAGTTTCAATTCAAGGGGATAA
TATGTATCATGTTACTTCTGGTTGAGNGTCTCCTGATTAGGAGACGTCTC
CTGATTAGGAGACATGTAGGTCGCTTGGGGTTGCTTGATTAGAAGACCCG
TCTCCTAATTAGGAGACATAAAACTTTGATCTCAATTTTAAGGGCTTTTT
TAGGCTTTTCCGCGCATTTTGAAACTAGTTTTAATGGAAAGAGCAGCCTC
GAATTGGTAAAGTTTTAAAAAAATTATCAAAATTTCTCGGTGCAATCGAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCAAAATTT
CTCGGTGCAATCGATCACAATCCTAATATAAAGCACTACAAGGAAGCCCC
TCTTGATTTTTTTCATGTCCGCCATTTTTCTTTTTGAGAGGCTTTTGTTC
AGAAGACAGATTCTTACTTCTGATTGGTTCTTATGGATTATTAGAATTGT
GATTGATTCCACCGGTGGATTTTTCTGAAAATCGCCATATGGATTCAATT
TTTTGTGCTCTTTCCATTGGGAGCAATCAAATCATGCGCAGTTTGCTCGT
TCACAAGATAATTACACCCGTCTCCTGATTAGGAGACGTGAACCTCCTGA
TTAGGAGACGGGTCTCCTAATCAGGAGGCGTCTCCTAATAAGGCGACTGT
TCCTGACTGCAATAGGACCTTTTCACCTGTAGCTGTACCTTTCAAGAGCA
GCCACCGGCTAGGAAGTATGAAATATCTGTTCTTGAGGTTCCTTTCTCCT
GGAAAAAATTATCTCTTCTGTATCCTGGGCTCTCCTGGATTATATCAGTA
TAGACCTAAACTCTTCATACAAAAATTACAGGAAACGCATATTTGGTGGA
ATGGCCGTCCCATGTTGCGTAAGATAGTTCCAAGTTGGAGCAGTTGACGG
TAATAGACCTTTTTTCAAAGAGTCCACCCTGTTGAATAATTATGTAGTCC
AGCAGAAAAACAATGATAAAACCATGCATAATTATTACAATATGCATGGC
TCTATTATTGTTTTTATGGCTGGAGTATATAATTATTCAACAGGACGTCC
TCTTTGAAAAAAGGTCTATTTGTTTACCTTTATTCTTGCAGTATCCCAAC
ATCCAAGCTCTCAAATATCACAAGCCGAATGAAATTACTTTCGATTTCCC
TTAGAAATTATGCGATGAGAAATCCGGGGGTCGAAGAATGAAGACTTTCT
TTTCTGCACAAGTTATCTTTGCTTATAATGAATTATTACTTTTCAAGATA
TTTGTTAAATATAATTTTTGATTACAAAAATATTTTATATTGTATTTTAA
GTTTGAAAAAGTTGATTCTACTTAGTTCTTTGTTTTCATGTCCAACCCGT
ATGTATTTGTTTATGTTTGATTTTTTATGTCGAAATAACAAGATGCATAC
GGCCATCGATATTGGACAATTCTACGGTATCAGTTTGGGAAATTGTATAG
AATGACAGCGCTGAGAAATTCCACAACTTTGTTGCTGTCAAACTCTGCAA
CGTTGTCAAATACTGAAGCTTTTCAGCTTCAAAATTTGATAACAACGCTT
GTCTTTTTTTTAACCATCAAGAACAGAGTCTTTTAAAACCAACAAGAACA
GAGTCACAAAAGGTCACAGGGTTTAAAATCATCATGTGCATTTTTCAAAC
CAATCCAAAAGTAAACTTTTCACCTTAGGATTTCTCAATTTCTTACCTAT
GGATTTTTCACAATCATCCTTGCCAGTAATGCTTCTTTAAAAAAAGAGCC
AATTCAAAAATTCAAAAGAGAGAGATTTTGCCTGATTTTGCCTGATTTTG
CTCCAAGATTTAAAAAAAATTGCTGAGGTATTCATAATTTTAAATCACAG
GCTTCGATTGGAAGCGTTGCGTAGAATAAGTAAAGAATTAGATAAACAAA
TGAAGAAAGTAGCGAAGTAGCGAGTTGATAAAGCAATAGAGAAACGAATG
AAGAAAGTAGCGAAGTAGCGAGTTGGTAAAGCATTAGAGAAACAAATGAA
TAAAATAGCGAAGTGGCAAATTGATAAAGTAATAGATAACAAATGAAGGA
AGTAGCGAAGTAGAGAGTTGGTAAAGCAATAGAGAAACAAATGAATGAAA
TAGCGAAGTGGCAAGTTGATAAAGCAATAGATAAACAAATGAATAAAGTA
GCGAAGTGGCAGGTAGATAAAGCAATAGATAAAGAAATTAACTTCGCTTT
TTTGAGTTGGGAAATCTTTTTGGGTCGCTAAATCTAAAATTCGAAGCTAT
AATTCGAACCCTGAATTTGATCTCAAAATCAGTTTTCCCATCATCTCAGA
AAGGTTCTGAGGAAAATCAAATGTGGTACTCTTTGATAGTTTGGTCTGAA
AGTTCGATCAAAAAGGCAATATAAAATCATGAAGGTAATAAAGATGGATG
GAGAGTCAATGCCTTTTTTTCTATCTGATTTATCATCGGAAGCAAACAGC
TGTTTGGTTGCTTTGGGAATAAGATGATTAATTTTGGGTATAATCATGGG
AATATTTAAGATGAATGAAAAGACATTACATTTGTAACAAGTATATTGAA
ATATAATAGCCTTGCCATGAAAAATTGAAAAGATCTTCACATATTAAGCA
CAATACACCAAACTTCTAGGGGAAGCTGCCCATAAAGCCATCGACAGATT
TAAAAATGAATTACGTGTTACGATTAGGAACCTTGTATCGATCATTTTGT
CGGAGTATGAAAACCGCTGCCCACTTAGACGTGCAGATTTTAAGATAAGA
AACTTTCAATGATAATGTGATGCAACTTTCAATGTTAACAAAATGCCAGC
TCAAAAATGTGTCCTTATGAAATTAATGTACTCTCTTTTACTCTTACATC
AGTTGAAACTATCAAATAGCATTTTAACTAAGATTTCTCGCTGTTCTGTT
CTTATAAAGTTATAAATTAATGTTTTTTGCTTCCAATGATGGTACATCAA
AGAAAAGCCGCTTTGAATAGATTTATAAAAGATTTCAACGACCATTTTAG
GTCATTACCGAGACGTTTTCTCTCCATCTGTATCTTTATTACCTTCATGA
TAAAATAGAACTCGTGTAGCAGTGGGTGGGGTTTCATTCTCCGAAAGGTT
TTATCAGTTCCTTTGTATTTTCATTTTGTTAACTTTCCAGTCGATATTAA
TCCATTTCTTACTTTAAATATCTAAATATGGCACAAATTTTTTTGAATAC
TCTTAGTGACAATAGAAAGAATTATTGACAGCAATGCTTGTTGCTCCTAT
GAATAGAACCAGAAAGAATTTCATTTCTTTTCATTCAGAAAATGTTTATT
TTAATCTTTGAACATAAATACGCATGTTTTTTATAAAATCTTGAAATAAC
TTTAGTATTGACAAGCATAATTTCAAATGAGCCTCAGTTTACAAAATTTC
AGATAATAATTTACTGTATACTGTCAATATGTAAATCATCTATGTAATAC
CGTAAGTGGATAAATTTTGGCGTGGATTTAATTTGGCGATTGGCCAAAAT
ACGATTTTTGGTGGGGATTTAATTTGGCGATAGATCAATTTCGTAAAATT
TGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCTTAATTTGGTGAATTGGAAATTTTGTCACACTGAAATG
GGTGAAAATTACTCAAAAATATACTAAAAAGTTGTGATTTTTCACATAAT
TCTCTTTTTGTTAAATTTGGCGGGGATTTAATTTGGCGAATTGCCGAATG
TGGAAATTTTGGCAAGGATATAATTTGGCAAATTTTGGCACAAGTCGTCA
AATTCGCCAAATTTAATCCCCGCCAAAATTTATCCACTTAAGGTACGTCA
TTACAAAAGCATAGCATGAGCGTATTTGAGTCTTAAAAATTTTTTAGCTA
GTCATAATGAAGGTCGTGAAAATTTGGGACAAGCTGGAGTTTTTACAAGC
TCTAATGTGATTTGGTTGGTCGTTAGCTTGTAATAAAAACAATCTTATTA
CTTTTTCTATAGAACGCGTCATCTCTATTACTTCAAATGACCAATTAGTT
AAGTATCTTATAAAAACTCCAGCTCATCCCAAAAATTTATTATGTATTAC
ATATAATTTTATATTTTCCAAAGAAAAATGTTGATTTTATAAATTCGAAT
GCAATGAAAAATCGTCTGGAAAATGTTTTTGTATAGCATTGCATTTTTAT
ACGTATTGTTAATGCCTATAATACATCTCACCAGATTTCACTTCAGTTTT
TTAAGCTTGCACTTGACAGCTCTACATTTCGAGTTCACGATTTCATTAAG
TTCTCCCTTCTCATGAAGTTTTTCAAATTCATCTTTATACAAGGCTTTTG
CACTGTTCATGATCACTTTCAATCGATTAGGTGACAAAGCAGAACTATTA
ATCTCGGCTTTTTGGTAGGTCCGTCTACTAGCATTAACTCTTCTACTGGC
TAGCTCTTCTGATGTGTATGATTTTGCAAGTTGTTGACGTATGAAAATGG
CGCATCCGTTACGCATACATCTTCCTCTTTTTGTTTCTTGTCCCCTTAAC
TTTGCATTTCTTTTACTTTGATTTGATTGTTGATAGCTTCGATTTCTTTG
GTTGATAGAGTCCTCAGGTTGTTTTGTCAGCAGCATCATTTGAGGATTTG
GCTGAACGATTGCATCTTGGCTTGGAGGGATCTCCTTTTTAATGTTGTAA
ACTGATCCGATCTGAATGTTTAACGGTTGATCGATCTCTGGCTGTACGAT
TTCGATATTTTCACTGTGGCTTTGGTGATTTGAGAATTGCGGCCAGAGAC
TTGACGGGGAAAGTAGACTCGGTGCAATATTATAGTCGTCTAACTCTCTC
CTTGTGGGTGAGCCTTCATAACTACTCGATCGTTGATTGTGATGGTTAGA
CACCTGCTGGTTTAAACCATCCACCACCTCTCTACTAAAGCAATCAAATT
TGCTTTCCAAAGAGCTGACATGGCTTTTCAAACCTTTCAACTCAGTGACA
ACGGTAGATAAAATGGCATATACGTTCGAATCTTCGGTTTGCGTGCCAGC
CTCGCGTAGCACCAATTTCGGTGGACTGCACGTTGCTGGAGAGTTTTGTC
GCAGTGCTTCAATCGTTCCCAATTTCTCTGGTAGATGTTTCAAAACTTCC
ATCAAGTTTTCCATAACTTGCACTCCTTTGTTAAAGTTCTCTTCGGAAGC
TGACATTTTAATGACCTAATAAAATAGAAGATTTAATATAAGTTTAGGTT
TCAAAAATAGATTGGTTGCTAGACAGTCGGCAGCATAATATCGAAATCGC
AAGAACTGCCATCACAGGAATGATGTATTTCCCGAAAGCCCAAAAAGGAA
ATAATTTCCCTATTATTTGGCCGTCACCCACCAATTTTTTGTGCTCTGTT
CTGGAAGTATGTGCCGAATCAGCAAGAAAATATAGGAAAGATGGAATTAA
AAAAAGGTGGTTAACCGGTGAATTTCCTTACTAACCGGGGAATATTACTT
CTCTTCGGGAAATATTTCCCCTTCAAGGCAATACTTGTCATTTCGATATA
GTGTTGTCGACTGTATGAAGCATATAGGACCATATAGAGTACATTCTAAG
CCCATGTAGAGATTCTACAATTATAAATGAAAGATTCCCCCACTCTTAGT
TCTGTTCTAGCAACGACTTACAAATATTTGTAAGTCCTTTGATTCTAGTG
AAAAGATTTCTAAACACACACTTAGTGCAAATTATTTCTCTTGCCACACG
ATTCTCTATTTCGTTTATCTCTTTCTTTCATCGCTTTATGTATATTTTCA
CGATTTCTGTGTTAAAAATTCGATTTTTGAGCACATTTGCTGCAACGTGT
ATTTATCGTTTAACATAGTAAGAAATCTATTATGCATTATTACAGAAACT
CTCTTTCTCTTTTATCTTACGCTTTTACACAACAAAGCATGGGATATACG
AAGTATTATAACATTATCCATAGCAACAATCTTAAAACGAATTATTTTTA
TTTTAAAATAACCAATATCGTTTTTCTTTCAGTTCGTATCTATTACTTTC
TTTCCGTTTTCAAATACTCTTATTACAATCGTATTACTCCATATAACCGT
TCTCCTCTCTCATCTTTCAATAAAGACATTTCAAGAGATTATTTATATGT
ACGTAAGAAAGACATGTTCACTAACGTAAAAATCGTAAGTTGCTAGATAC
ACTTAAAACATACCTATTCAATTTCAAAAACTCATCCAAACTTGTTTAAA
CTTGTCAAAATAAAGTTTTTTTCTACATGCGTCCTTCTCTTCGTATCAGT
TGCATTCATAAACTATATTCAATTTTTCGAAAGCTTTCAATTTTATTTGA
TTGATTGTAAACGTTCATTTAATTGTCGCTCGTTAAAAGCACTAGTGAAA
CGATTTTTCCATTGTTATGTCACAGGATATGAAAATACGAATAATGCTTA
ACGAAATTGCTGTTGTGATTTGAGGGATTTTTTCTTAATTTGACCGCTTT
GTTATTTGGCCTTTGATTGACGTGTCAGCTCAGTTTAAAACGATTTAGAA
AGCTTTCGAGTTTTGTTTTTTTATGATCTCGAGATGCTTAAAATCATCAT
GGGTCTCTGGGTGTATTTGCACTGTTGCTTGAAAGTTGCTTGAAATATGG
GAACAAAGAATTGCACGATCTTCTCCTTTGTCTTATTATCGAACTTTGCA
CGATCGCGTGATCGTATCTCAAGCAAACTTCAAGTCAAAACCATTAATGA
TCTTGTTTTAACCTTTTAAGTGCCAATGTCGTATATATCAGGCGAAGCCC
TCCTGTAATGCCCAGTTTGAGCTAGAAATCGTCTTTTTTGGTCTAACTCG
TAGGAATTGGATCGGGCTTTATGGTCAAGCAAAAAAAAACTCAAAGTGAG
TCTTTTCAGCGAGATATTGAGCTAAAAAGTCAAAAAATGCAAAAATTTGA
CAAAAATCCACTTTTTAAAGATTCTGACCGTTTTTTGACCATTTTTGGTC
AACGAGTGAACCAAGAACTTCCAAATTTGGCCCTGATTTACTTGGTTCTG
TCCTTCAGCGAATTAATTTGAAGTTTTGCCACTAGGCACCTTTCTATTAC
TTATCTACCCCTCCTTATCCGCCGCCCACCCCGCCCTTCCTAAATCGAGA
CTCTAAGCTATCCAACGAACTATAAACGAGCTTCTAACTCCTTCTAGATC
CGGATATATAAGCCTTTAAAAAAGTTTGAACTAGAGATTTTCTTTAAAAA
ACTTAGAAAAAAATTACCGTGGCACTTAAAGGGTTTATGGTAAAAAAAAC
TTTTATCAAATACTTTGCGTGAGCGTTTCTGGTAACACTGGAAGGCTTTG
TTAATTAAATTGGTATTGTAAAATCATTTATGTTTTTTTGTTGATAAAAA
GCTTTTTTGTAAAAAGATTTTTACGAATTGCATTCATTGTTGCTTTAATT
GATTTCGCACATTATTGCACGGTACTGAGTACAATATGGGAGAGATTTTT
TGAGTTTCAGGATTTTGAAATGTTTTAGACGAGGAAAATATAGAAAACTC
TGAACGAGAAAAATATATCCCATATTGTACGAGTAAAAGACAATTCAAGA
CCATTTTTAATTTACATTCAACATCTTGAAAAAAGTCACGTGTCAATTGA
AGGAACAAAGGTCTTTAACATTGAAACAGTCATACTTACGACTATTTAGC
ATTTTCGAGTGTAGGTCATTTAATTGCACCCATGTTCTTTAATAGGCGTT
ATGCAATAGACGTTACAACAGTTAGCATTGGATAATTATTATCAAAGTAA
TCATTTAACATTATTTTTATCTTTAAGATTGGAGTCCGAAATGACACGGA
AAACAGATTATGCAAGCATTCAAGACACCACATGTTGTAAAATCGAAGAC
CTCGTCGAAGACAACATCACCACTTGTTATGGTTACAAACGGAATTGTGG
CAAGACATTTCTTTATATACTAGGAGTCATCCTAACCGCTGGATTCCTAT
GGTTGGTCACTTACTGGAAACCTGACTGGAAATTATACCTGACTCATTCG
AAATGTTCGTTATCGATTGCTCAACGTGTCTTGTTGGTTGATCAGTTTAG
TACGATTTTCGTGGAACCCGTTTTCTCAAGACAATTTCCGAAAGAGGCTT
TACCTTTCCGATCGAACTCCACAAGTAACTTCAGCGATACACAAAACAAG
ACATACACTTATTTCATGTACCGACGTTTGAAATATTACTTCGACGAGTT
TTCAGAAAGGTATAAAGAAGCGGAAAGTGTGGACGATAACGCATCCATTC
ACGAATTGTACCAGTTCAATTCTTCCAAAAATGAAATACCAAATAGACAG
GCTTTGATCAAATGGTTTGGACCTAATATCATTGACATCAAAGTCACACC
ATACATCACATTATTCTTTCAAGAGTGTGCCGACCCCTTTTACATCTTCC
AAGCTCTAAGCTGTTTGTTGTGGTTCATGGACGATTACTATTATTACGCT
TCTGCAATCGTCTTCATCTCGCTTACTTCGATCATCATAAGTATGTATCA
AACACGACAGCATTTGGTCACCCTTCATAACATGATCTCCAAATCCTCAG
AGGTGACGGTGCTAGACGCCAACGGGCAAGAGATATCCATTCATTCCAAA
GACTTGGTACCGGGAGATATTTTAGTCATTCCGAAAGAGGGGTGTATGCT
TTTATGTGATGCTACCTTGATCAGTGGCACTGCCATTGTGAATGAAAGTA
TGCTGACAGGGGAAAGTGTCCCTGTAACTAAAACATCATTGAACAAACCT
CTCTCCAAAGAAGAAAGTCCTATCTACAATTCATTACGGTTTAAAAGAAA
CACTTTGTTTTGCGGGACACAAGTTTTGCAAACGAGATATTTTGGCAATG
AAAAGGTTTTAGCAGTGGTCGTCAAAACTGGTTTCACTACCATGAAGGGA
GGTTTGATAAGATCTATTTTGTATCCAAAACCCGTTGATTTTAAATTCAT
CTCTGACGCTATGAAGTTTGTAGGAGTACTAGCCTCCTTTGCTGCAGTGG
GACTTATATATACTTTAGTTATTTTTTATTACCATGGGGCGACAGTAGGA
CAGATGTTCAAGAAAGCGTTAGATGTGATTACAATTGCGGTACCACCCGC
ACTGCCGGCTGCAATGAGTGTTGGAACAGTCTATGCGTTACATCGTCTCA
AAAAGAAAGACATTTTCTGTATCAGTCCATCGCGAATCAATATCAGTGGA
CATTTGAATTTATTTTGCTTTGATAAAACAGGAACTTTGACAGAGGATGG
TTTAGACTTTTGCGGGATTATTCCGGTGTGTGGCAACGACTTTAACCGTT
TACAAGAATCAGTATCTCACGATTCACAAGATAAGTTTACTATAGGAATG
GCATGTTGTCATTCGTTGACTATTATCGATGGTCATATTACTGGCGATCC
TTTGGACTTGAAAATGTTTGAAGCAACAGTGTGGGATTTAGAAGAGTCCG
GGGGAGTGGAGACGGAACGGTATGGGAGTATGGTACCGACCATCGTTCGT
CCGAAACTGTCAGCCGTCGATTCTGTTCGTATGAAATATTTAGATGACAA
ATCATTACCTTTGGAAGTAGCCATCTTAAAGCAGTTCACCTTTAGTTCCG
AGCTTCAACGCATGAGTGTGGTTGTTCGTAAGTTGGGAGCACCAAACATG
GAAATCTACGCCAAAGGCTCACCTGAAATGATCGCCTCGTTAAGTACAAA
AGAATCACTCCCTGACAACTTCGAAGAATGCTTAATGACTTACACAAGGC
AAGGGTATCGCGTCCTTGCACTAGCACATAAATCACTTCCCAAGTCAGTT
CATTGGCATAAAATTCAACATTACGTACGTGGACAAGCAGAATCAGATTT
AACTTTCCTTGGCTTCATCGTTATGAAGAATCTTTTAAAACCTGTCACCA
CAAGTGTCATCAATCAATTGGAAACGGCCAACATTCGAACTGTCATGGTC
ACTGGAGACAATGTTTTAACAGCTGTCAGTGTGGCCAGGGAATGTAACAT
GGTCAGAGCACACGAGAAGATCGTCTCCATAACACAGGGTGATGGGAATA
AGCTTCAATACAATATTGTCGGTGAACTAGATGCCCTTGAGGAGGAAGAA
AAGAACAAACCTATCCTATTCGAAAAATTGAAATCCGATTTCGAAAAATA
TTCAGGAACAGACTACCATTTTGCAGTGACTGGGAAAGTGTTCGCGCATA
TCTATGATGAAGAGCCAGTACTCTTCGAACGTCTTCTGGTTCGTGGCACA
ATCTTTGCCAGAATGCTACCTGATCAGAAAACATTACTTGTTGATAGTCT
ACAAAGCCTTGGTTACAGTGTCGGTAAGTCCTTATAGTTGGGGTTATTTT
ATAGCTGTTCTTTTGTTTAAGATCGATCGCCCGCAGTCATTGTATTACAC
ACACCTCCCTACTGGTCAGACCGCTTCCAGAGCCCTTCGAAAAGAAAAGG
GAAGACGAGAGCTCATTTTGTAGGATAGTTTATTATTAGTTGTTTGTTAT
ATGAGCAAGCAGGGATTTTCATGAATTCTTTTAATTTCAGGCATGTGTGG
TGATGGAGCGAACGATTGTGGTGCATTGAAACGAGCGAACGCTGGAATTT
CTCTCTCCGAAACGGAAGCATCAGTCGCATCTCCTTTCACGTCAAAAACA
CCAAACATTAGTTGTGTGGTGGACGTCATTAAGGAAGGGCGGTGCGCCCT
CGTCACTTCTTTCAATATCTTCAAATACATGGCGTTGTACAGTATGATAC
AGTACACTTCCGTTCTCATCATGTATTGGGTGGGAGTCAATATGGGCGAT
TTTCAGTACCTCTACATTGACCTCTTCACAATTATGCCGTTCGCTATCAC
CATGAGTCGTACGGAACCCAGCGGTGTGTTAGTGGCTTTGCGTCCACTTG
GAAGGCTCGTTCATCCATACGTTCTTTTTTCGATCGTCATTCAAATTGCC
ATTCAAACCTCATTTCAAGTCGCTTCTTATTTCTTCGTTCAAACCTTACC
TTATTATCAGCCAATGAGTGTTTTTAAGAATCAGACACACGATTCAGACG
GTTATCTTCTGGCGTACGAAAACACTATTTTGTTCACGTTGACGTGTTAT
CAATATATCTTCGTTGCGCTCGTTTTCTCCGTCGGTAAACCATTCCGTAA
GCCCTTCTATACCAACATCCTGTTGTTGTTGTCTGGTTTAGTGTTGTTGG
GCTTCACCACCTTCCTTGCAACTGGCCCACCCAAAGAAGTTCGAGATTTA
TTTAGTCTTCTACAGATGAAACCGGAAGGCTCTTATTATTACGTATTCTT
TGGTTTGGTAGCTGGTAATTTGTTGGTGTCTGTTTTTGTGGAATATGTTC
TCATGGAAACTGACATCATGAAAGATTTGTTAAACTATGAAGATAAGAAA
CAGTTAACAAAGTACCAACAAATTCAAAAGGAAATTTTTCATGATGATAC
TTGGTACAAAAGTTTGGGCGTTTGACATAAACTTCGTACTGATAGATTTT
TTGAATTCAAAATAGCGAGCCCCGACCCCCCCTCCCGTCAGGTGGCAAAT
ATCGAAGCAGAAACACAGTCTACAATACATTTTTTTAAATCTAAACCCGT
CCTTTTGAGGGGATCGCGTTAAGCCTATGAAAGTTTATTCAGGACGAAAA
TTACTGATTTGATTGTATTGAAAGAGACTATGAATTTTTTAAATTATTTT
TTGTAATATGAGAACTATCGACTTTGAATATACTATTTTGTTGTTTAGAT
TTGTGATTTTTCTACAATTATGAGCTCATTCTAGAGCAATAATGTATTTT
TTAGATTATCTTCTATATCGTAGTAATGGGGTTTCTTTTACCGAATCATC
CTAAACGAGTTTCCTTATTGTGACTGATTCTACTGATGCTTGAATTCTTG
AATTTGAAAAGATTCCTTTGAATGTATCAAGCTTTTGAAGCAATTTTCTA
ATTGATTTTCACATTTGAAGAATGAAATATCATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053678-exon-scaffold_233-1575043694:706647..706829 | TCONS_00053678-exon-scaffold_233-1575043694:706647..706829 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1575043694:695757..698302 | TCONS_00053678-exon-scaffold_233-1575043694:695757..698302 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1575043694:694095..695539 | TCONS_00053678-exon-scaffold_233-1575043694:694095..695539 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1510915933:706647..706829 | TCONS_00053678-exon-scaffold_233-1510915933:706647..706829 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1510915933:695757..698302 | TCONS_00053678-exon-scaffold_233-1510915933:695757..698302 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1510915933:694095..695539 | TCONS_00053678-exon-scaffold_233-1510915933:694095..695539 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1491911889:706647..706829 | TCONS_00053678-exon-scaffold_233-1491911889:706647..706829 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1491911889:695757..698302 | TCONS_00053678-exon-scaffold_233-1491911889:695757..698302 | Clytia hemisphaerica | exon |
| TCONS_00053678-exon-scaffold_233-1491911889:694095..695539 | TCONS_00053678-exon-scaffold_233-1491911889:694095..695539 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:694095..706829 - |
Blast
BLAST of TCONS_00053678 vs. Swiss-Prot (Human)
Match: AT133 (Probable cation-transporting ATPase 13A3 OS=Homo sapiens GN=ATP13A3 PE=1 SV=4) HSP 1 Score: 852.818 bits (2202), Expect = 0.000e+0 Identity = 483/1088 (44.39%), Postives = 663/1088 (60.94%), Query Frame = 2
Query: 284 YGYKRNCGKTFLYILGVILTAGFLWLVTYWKPDWKLYLTHSKCSLSIAQRVLL--VDQFSTIFVEPVFS---RQFPKEALPFRSNSTSN--------------------FSDTQNKTYTYFMYRRLKYYFDEFSERYKEAESVDDNASIHELYQFNSS---KNEIPNRQALIKWFGPNIIDIKVTPYITLFFQECADPFYIFQALSCLLWFMDDYYYYASAIVFISLTSIIISMYQTRQHLVTLHNMISKSS--EVTVLDANGQEISIHSKDLVPGDILVIPKEGCMLLCDATLISGTAIVNESMLTGESVPVTKTSLNKP---LSKEESPIYNSLRFKRNTLFCGTQVLQTRYFGNEKVLAVVVKTGFTTMKGGLIRSILYPKPVDFKFISDAMKFVGVLASFAAVGLIYTLVIFYYHGATVGQMFKKALDVITIAVPPALPAAMSVGTVYALHRLKKKDIFCISPSRINISGHLNLFCFDKTGTLTEDGLDFCGIIPVCGNDFNRLQESVSHDS--QDKFTIGMACCHSLTIIDGHITGDPLDLKMFEATVWDLEESGGVETERYGSMVPTIVRPK---LSAVDSVRMKYLDDKSLPL--EVAILKQFTFSSELQRMSVVVRKLGAPNMEIYAKGSPEMIASLSTKESLPDNFEECLMTYTRQGYRVLALAHKSLPKSVHWHKIQHYVRGQAESDLTFLGFIVMKNLLKPVTTSVINQLETANIRTVMVTGDNVLTAVSVARECNMVRAHEKIV---SITQGDGN--KLQYNIVGELDALEEEEKNKP--ILFEKLKSDFEKYSGTDYHFAVTGKVFAHIYDEEPVLFERLLVRGTIFARMLPDQKTLLVDSLQSLGYSVGMCGDGANDCGALKRANAGISLSETEASVASPFTSKTPNISCVVDVIKEGRCALVTSFNIFKYMALYSMIQYTSVLIMYWVGVNMGDFQYLYIDLFTIMPFAITMSRTEPSGVLVALRPLGRLVHPYVLFSIVIQIAIQTSFQVASYFFVQTLPYYQPM-----------------SVFKNQTHDSDGYLLAYENTILFTLTCYQYIFVALVFSVGKPFRKPFYTN 3355
YGY + K + LGVI + GFL L+ YW P+W++ T + ++ + VLL D+F F + +P + SN SN +S T+++ YF + +KY++++ + + +D+ S +Y+ +S+ K R+ L +G N I +KV L +E +PFYIFQ S +LW D+YYYYA AIV +S+ SI+ S+Y R+ V LH+M++ S V+V N + I S DLVPGD++VIP G ++ CDA LI+GT IVNESMLTGESVPVTKT+L P + +YN KR+TLFCGT V+QTR++ E V A+VV+TGF+T KG L+RSILYPKP DFK DA F+ L + A +G IYT++ + VG + ++LD+ITI VPPALPAAM+ G VYA RLKK IFCISP RINI G LNL CFDKTGTLTEDGLD GI V F +E+V ++ + +F MA CHSLT I+G ++GDPLDLKMFEA W LEE+ ET + ++PT+VRP L + ++ LP E+ I++QF FSS LQRMSVV R LG M+ Y KG+PE IA L E++P +F+ L +T+QG+RV+ALAH+ L + WHK+Q+ R E+++ F+G I+M+N LK T +V+ L ANIRTVMVTGD++LTAVSVAR+C M+ +K++ ++ DG K+ ++ L P I + + E T YHFA+ GK F+ I + L +L++ GT+FARM PDQKT L+++LQ++ Y VGMCGDGANDCGALKRA+ GISLSE EASVASPFTSKTP+ISCV ++I+EGR AL+TSF +FK+MALYS+IQY SV ++Y + N+GDFQ+L+IDL I+ TMS LVA RP L+ +LFS++ QI I FQ +F+V+ P+Y+ S N+T + + YENT +F ++ +QY+ VA+ FS GKPFR+P Y N
Sbjct: 20 YGYNLSRWKLAIVSLGVICSGGFLLLLLYWMPEWRVKATCVRAAIKDCEVVLLRTTDEFKMWFCAKIRVLSLETYPVSSPKSMSNKLSNGHAVCLIENPTEENRHRISKYSQTESQQIRYFTHHSVKYFWNDTIHNFDFLKGLDEGVSCTSIYEKHSAGLTKGMHAYRKLL---YGVNEIAVKVPSVFKLLIKEVLNPFYIFQLFSVILWSTDEYYYYALAIVVMSIVSIVSSLYSIRKQYVMLHDMVATHSTVRVSVCRVNEEIEEIFSTDLVPGDVMVIPLNGTIMPCDAVLINGTCIVNESMLTGESVPVTKTNLPNPSVDVKGIGDELYNPETHKRHTLFCGTTVIQTRFYTGELVKAIVVRTGFSTSKGQLVRSILYPKPTDFKLYRDAYLFLLCLVAVAGIGFIYTIINSILNEVQVGVIIIESLDIITITVPPALPAAMTAGIVYAQRRLKKIGIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQRVENARFLSPEENVCNEMLVKSQFVACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEEATEEETALHNRIMPTVVRPPKQLLPESTPAGNQEMELFELPATYEIGIVRQFPFSSALQRMSVVARVLGDRKMDAYMKGAPEAIAGLCKPETVPVDFQNVLEDFTKQGFRVIALAHRKLESKLTWHKVQNISRDAIENNMDFMGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDSMLTAVSVARDCGMILPQDKVIIAEALPPKDGKVAKINWHYADSLTQCSHPSAIDPEAIPVKLVHDSLEDLQMTRYHFAMNGKSFSVILEHFQDLVPKLMLHGTVFARMAPDQKTQLIEALQNVDYFVGMCGDGANDCGALKRAHGGISLSELEASVASPFTSKTPSISCVPNLIREGRAALITSFCVFKFMALYSIIQYFSVTLLYSILSNLGDFQFLFIDLAIILVVVFTMSLNPAWKELVAQRPPSGLISGALLFSVLSQIIICIGFQSLGFFWVKQQPWYEVWHPKSDACNTTGSGFWNSSHVDNETELDEHNIQNYENTTVFFISSFQYLIVAIAFSKGKPFRQPCYKN 1104
The following BLAST results are available for this feature:
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