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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053682 ID=TCONS_00053682|Name=TCONS_00053682|organism=Clytia hemisphaerica|type=transcript|length=509bp
ttaaaatacccaaaagtgccaatatttCGGCACCGATTGTAGATGAtatt
attgatttttcttttttgtacaAAGGTTTTTCTAATTGGCTTAGACAAGT
TACttcttttttcaatatattaTGTTGTAATATTTTcagtgtattttttt
aaaagtgtatccttttaatattttcatttcaaatttgttaAAATCATTTC
GATACAAATAACGAACACAAGAATGGATAGATGTGCATGGTGAAGCCAGT
GTATCAGACAATGTGTCACTTACTAACGAATATACGCTAATACCTTAACG
TCAACTTGGACAACGCTGGATGTAGCAGAAATCAGTGATTTCAATTCCTT
CGAACTATAATTGCATTGGCAGGAAGAAAGGGTTGACAAATCGTCCATGA
AAGATGTCAAGATTGAACCACGTTTAGCAAATCCTGATTTGATGGAATGG
CACCGTATAAAAACAAGTtctgataatttttaaaaagagcaCTTTTTTAT
CTTAAATAC Run BLAST on NCBI transcript from alignment at scaffold_233:918514..919388- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053682 ID=TCONS_00053682|Name=TCONS_00053682|organism=Clytia hemisphaerica|type=transcript|length=875bp|location=Sequence derived from alignment at scaffold_233:918514..919388- (Clytia hemisphaerica)
TTAAAATACCCAAAAGTGCCAATATTTCGGCACCGATTGTAGATGATATT
ATTGATTTTTCTTTTTTGTACAAAGGTTTTTCTAATTGGCTTAGACAAGT
TACTTCTTTTTTCAATATATTATGTTGTAATATTTTCAGTGTATTTTTTT
AAAAGTGTATCCTTTTAATATTTTCATTTCAAATTTGTTAAAATCATTTC
GATACAAATAACGAACACAAGAATGGATAGATGTGCATGGTGAAGCCAGT
GTATCAGACAATGTGTCACTTACTAACGAATATACGCTAATACCTTAACG
TCAACTTGGACAACGCTGGATGTAGCAGAAATCAGTGATTTCAATTCCTT
CGAACTATAATTGCATTGGCAGGAAGAAAGGTATAACTAAGTTTTTAAAC
ACTGAATTTGATTTTATGACTTGATGTTTTAAACGGGAACACGTCCATTT
CTGCCGCTACTTTTTTCATTTGAACATACAAATATAAAAACGAATTTTAC
CTTTTTTTCATCACAATAAATAAAAGATAAAATTGATATAGAAGAAAATG
AAGACTTTTGCGATGAAAAGACGCAAAGAACTCCAACTTTAACGTCTTTA
TTTCTCGGCTTTCTGTTTCAAATCAAAATCTCCGAAAGCAGTCATGACTT
TTTTGTGTCATTAATGAAATAATTTCTCCAAAGAAATCTACTTGTTGTAT
GCATTGTAATCACCAACTGAGTATCCCTTTTCCAATTTGCTTTTAGGGTT
GACAAATCGTCCATGAAAGATGTCAAGATTGAACCACGTTTAGCAAATCC
TGATTTGATGGAATGGCACCGTATAAAAACAAGTTCTGATAATTTTTAAA
AAGAGCACTTTTTTATCTTAAATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053682-exon-scaffold_233-1575043694:919009..919388 | TCONS_00053682-exon-scaffold_233-1575043694:919009..919388 | Clytia hemisphaerica | exon |
| TCONS_00053682-exon-scaffold_233-1575043694:918514..918642 | TCONS_00053682-exon-scaffold_233-1575043694:918514..918642 | Clytia hemisphaerica | exon |
| TCONS_00053682-exon-scaffold_233-1510915933:919009..919388 | TCONS_00053682-exon-scaffold_233-1510915933:919009..919388 | Clytia hemisphaerica | exon |
| TCONS_00053682-exon-scaffold_233-1510915933:918514..918642 | TCONS_00053682-exon-scaffold_233-1510915933:918514..918642 | Clytia hemisphaerica | exon |
| TCONS_00053682-exon-scaffold_233-1491911889:919009..919388 | TCONS_00053682-exon-scaffold_233-1491911889:919009..919388 | Clytia hemisphaerica | exon |
| TCONS_00053682-exon-scaffold_233-1491911889:918514..918642 | TCONS_00053682-exon-scaffold_233-1491911889:918514..918642 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:918514..919388 - |
Blast
The following BLAST results are available for this feature:
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